Miyakogusa Predicted Gene
- Lj3g3v0382770.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0382770.1 tr|Q2HUG6|Q2HUG6_MEDTR Peptidase C14, caspase
catalytic subunit p20 OS=Medicago truncatula
GN=MtrDRA,54.22,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Peptidase_C14,Peptidase C14, caspase cata,CUFF.40654.1
(376 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 | chr1:2984284... 396 e-110
AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5... 392 e-109
AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 | chr1:2983398... 314 7e-86
AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 | chr1:2983668... 226 2e-59
AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 | chr1:5612304... 185 6e-47
AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 | chr5:1153893... 105 3e-23
AT1G02170.1 | Symbols: LOL3, ATMCPB1, MCP1B, ATMC1, MC1 | metaca... 54 1e-07
>AT1G79340.1 | Symbols: AtMC4, MC4 | metacaspase 4 |
chr1:29842849-29844368 FORWARD LENGTH=418
Length = 418
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/375 (56%), Positives = 251/375 (66%), Gaps = 12/375 (3%)
Query: 5 SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
S T+PTGKNIRR L LV SA+SGDVLVVHYSGHGTRLPA CIVP DMN
Sbjct: 53 SSTQPTGKNIRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMN 112
Query: 65 LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXXXXXXXXXXXXXXXXXXX 124
LITDDDFR+ V+KV G ++TI+SDSCHSGGLI+EAKEQI
Sbjct: 113 LITDDDFRDLVDKVPPGCRMTIISDSCHSGGLIDEAKEQIGESTKKEAEDEDESEESSSR 172
Query: 125 XXXXXXXRT-VEDAIESRGFHVPSALSHRGXXXXXXXXXXXXXXXIELPDGSRGYVKNRS 183
R+ VE AIESRGFH+ G IEL DG + K++S
Sbjct: 173 FGFRKFLRSKVEGAIESRGFHIG------GNKKDEDEAEEIETKEIELEDGETIHAKDKS 226
Query: 184 LPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXXXXXXX 243
LPL TLIDILKQ+TG D+I+VGK+RP+LFD FG+D+SPKVKKFMKVIL KLQ
Sbjct: 227 LPLQTLIDILKQQTGNDNIEVGKIRPSLFDAFGDDSSPKVKKFMKVILGKLQ-AGNGEEG 285
Query: 244 XXXXXXXSLAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSAKRG--LPDGGVLLSG 301
LA FL+ KL NDE Y KPAM+T VGSK+EVYAG ++ LPD G+L+SG
Sbjct: 286 GLMGMLGKLASGFLEGKL--NDEDYVKPAMQTHVGSKEEVYAGGSRGSVPLPDSGILISG 343
Query: 302 CQTDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQGFTQRP 361
CQTDQTSADATPAG P AYGA SN+IQ ILE++DGEI+N E+V +ARK L++QGFTQ+P
Sbjct: 344 CQTDQTSADATPAGKPTEAYGAMSNSIQTILEETDGEISNREMVTRARKALKKQGFTQQP 403
Query: 362 GLYCSDHHVDASFVC 376
GLYC D + +A F+C
Sbjct: 404 GLYCHDGYANAPFIC 418
>AT1G79330.1 | Symbols: AMC6, ATMCP2B, ATMC5, MC5 | metacaspase 5 |
chr1:29838722-29840137 FORWARD LENGTH=410
Length = 410
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/372 (56%), Positives = 251/372 (67%), Gaps = 14/372 (3%)
Query: 5 SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
S T+PTGKNIRR L LV SA+ GDVLVVHYSGHGTRLPA CIVP DMN
Sbjct: 53 SSTKPTGKNIRRALLNLVESAKPGDVLVVHYSGHGTRLPAETGEDDDTGYDECIVPCDMN 112
Query: 65 LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXXXXXXXXXXXXXXXXXXX 124
LITDD+FR+ VEKV + +TI+SDSCHSGGLI+EAKEQI
Sbjct: 113 LITDDEFRDLVEKVPKEAHITIISDSCHSGGLIDEAKEQIGESTKKKPKKESGGSSGLGI 172
Query: 125 XXXXXXXRTVEDAIESRGFHVPSALSHRGXXXXXXXXXXXXXXXIELPDGSRGYVKNRSL 184
VE+A+ES+G +P + ++L DG++ +V N+SL
Sbjct: 173 KGFVR--EAVEEALESKGIAIPHHKDEK---------DENKTKELKLEDGAKVHVVNKSL 221
Query: 185 PLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXXXXXXXX 244
PL TLIDILKQ TG +DI+VGK+RPTLF+VFGEDASPKVKKFMKVIL KLQ
Sbjct: 222 PLQTLIDILKQNTGNNDIEVGKIRPTLFNVFGEDASPKVKKFMKVILTKLQEGKTEGGIL 281
Query: 245 XXXXXXSLAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSAKRGLPDGGVLLSGCQT 304
LAQEFLK KL+ +DE Y KPAM+T VG+KQEVYAG++ L D G+L+SGCQT
Sbjct: 282 GMIG--KLAQEFLKHKLN-DDEEYVKPAMKTHVGNKQEVYAGASNGSLADNGILISGCQT 338
Query: 305 DQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQGFTQRPGLY 364
DQTSADA+P G+P AYGAF+NA+Q ILE++ G IT ELVLKARK L++QGF+QRPGLY
Sbjct: 339 DQTSADASPQGHPEMAYGAFTNAVQIILEETKGMITYKELVLKARKLLKKQGFSQRPGLY 398
Query: 365 CSDHHVDASFVC 376
CSD V+A F+C
Sbjct: 399 CSDSFVNAPFIC 410
>AT1G79310.1 | Symbols: AtMC7, MC7 | metacaspase 7 |
chr1:29833986-29835412 FORWARD LENGTH=403
Length = 403
Score = 314 bits (804), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 176/379 (46%), Positives = 232/379 (61%), Gaps = 35/379 (9%)
Query: 5 SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
SYT+PTGKNIR+ L+ L++ A+SGDVL VHYSGHGTR+P CIVPSD+N
Sbjct: 53 SYTQPTGKNIRQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTGFDECIVPSDLN 112
Query: 65 LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXXXXXXXXXXXXXXXXXXX 124
I DDDFR+ VE+V G ++TIVSDSCHSGGLI+EAKEQI
Sbjct: 113 PIPDDDFRDLVEQVPEGCQITIVSDSCHSGGLIDEAKEQIGESTTTKPNR---------- 162
Query: 125 XXXXXXXRTVEDAIESRGFHVPSALSHRGXXXXXX----XXXXXXXXXIELPDGSRGYVK 180
E + S F + L +E+ +G V+
Sbjct: 163 ----------ESKVSSFEFEFKNCLHSIFVKLLAFCGIGSSHVETREIVEVGEGDE-VVR 211
Query: 181 NRSLPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXXXX 240
+R LPL I++LKQ+TG+D+I++GK+RPTLFDVFGED+SPK+KKFMKVIL KL+
Sbjct: 212 SRYLPLERFIELLKQQTGQDNIEIGKIRPTLFDVFGEDSSPKIKKFMKVILTKLRKTNDQ 271
Query: 241 XXXXXXXXXXSLAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSAKRGL-PDGGVLL 299
A+ ++++ L NDE Y KPAM+ +V S +E+Y G + GL PD G+LL
Sbjct: 272 STLLGKIEES--ARGYIEETL--NDEHYMKPAMQAQVKSDREIYGGRSSNGLFPDRGILL 327
Query: 300 SGCQTDQTSADATPAGNPNNAYGAFSNAIQGILEKSD--GEITNSELVLKARKELERQGF 357
SGCQTD+TSAD G A+GAFSNAIQ +L ++D +ITN E+VL+AR+ L++Q F
Sbjct: 328 SGCQTDETSADVKKKG---EAFGAFSNAIQMVLSETDHKDKITNKEMVLRAREILKKQMF 384
Query: 358 TQRPGLYCSDHHVDASFVC 376
QRPGLYC+D V+A F+C
Sbjct: 385 IQRPGLYCNDRFVNAPFIC 403
>AT1G79320.1 | Symbols: AtMC6, MC6 | metacaspase 6 |
chr1:29836686-29837908 FORWARD LENGTH=368
Length = 368
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 146/201 (72%), Gaps = 14/201 (6%)
Query: 179 VKNRSLPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXX 238
V NRSLPL TLID+LKQ+TG DDI+VGK+R TLFD+FG+D+SPKVKKFM VIL+ LQ
Sbjct: 179 VGNRSLPLETLIDMLKQETGNDDIEVGKIRTTLFDMFGDDSSPKVKKFMNVILSNLQETT 238
Query: 239 XXXXXXXXXXXXS---LAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSAKRGLPDG 295
S LAQEFL+QKL ++ KPA+ Q+VYAG+ LPD
Sbjct: 239 TTIQTVSDEVLGSVENLAQEFLEQKLSDD----VKPAI-------QDVYAGAINGALPDN 287
Query: 296 GVLLSGCQTDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQ 355
G+L+SGCQTDQTS+DA+P G+P AYGA +NAIQ I+ ++ G+I+N +LVLKARK L +Q
Sbjct: 288 GILISGCQTDQTSSDASPPGHPELAYGALTNAIQIIIGETKGKISNKDLVLKARKLLRKQ 347
Query: 356 GFTQRPGLYCSDHHVDASFVC 376
GF QRPGLYC+D +V+A F+C
Sbjct: 348 GFDQRPGLYCNDAYVNARFIC 368
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 74/100 (74%)
Query: 5 SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
S +PTGKNIR+ L LV A+SGDVL VHYSGHGTRLPA CIVPSDMN
Sbjct: 53 SSIKPTGKNIRQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMN 112
Query: 65 LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQI 104
LITDDDFR+ V+ V + +TI+SDSCHSGGLI+EAKEQI
Sbjct: 113 LITDDDFRDLVDMVPKDCPITIISDSCHSGGLIDEAKEQI 152
>AT1G16420.1 | Symbols: ATMC8, MC8 | metacaspase 8 |
chr1:5612304-5613829 REVERSE LENGTH=381
Length = 381
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 177/391 (45%), Gaps = 82/391 (20%)
Query: 5 SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLP-AXXXXXXXXXXXXCIVPSDM 63
S +PTGKNI EL L+ S +SGD LV HYSGHGTR+P CI P DM
Sbjct: 53 SCIQPTGKNICDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDM 112
Query: 64 NLITDDDFREFVEKVSRGVKLTIVSDSCHSGGL---------------IEEAKEQIXXXX 108
NLI D FRE V +V G +LTI+SDSCHSGGL +++ KEQI
Sbjct: 113 NLIKDQQFREMVSRVKEGCQLTIISDSCHSGGLIQEVKEQIGESHMKPVDKVKEQIEESH 172
Query: 109 XXXXXXXXXXXXXXXXXXXXXXXRTVEDAIESRGFHVPSALSHRGXXXXXXXXXXXXXXX 168
V + + + G V + RG
Sbjct: 173 MKQPKLGIASYFL----------NIVMNLLATCG--VSKSQRDRGGGEESFRGE------ 214
Query: 169 IELPDGSRGYVKNRSLPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMK 228
IEL +K R LP + + +LK++TG+ +I+ ++R TL +FGED SP ++ +
Sbjct: 215 IELEKDETLDIKTRYLPFESYLSLLKEQTGQTNIEPVRIRQTLLKLFGEDPSPNRQRGLS 274
Query: 229 VILNKLQHXXXXXXXXXXXXXXSLAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSA 288
+ N ++D D G S
Sbjct: 275 DLGN--------------------------CEVDAGDSG------------------ASR 290
Query: 289 KRGLPDGGVLLSGCQTDQTSADATPAGNPNNAYGAFSNAIQGIL---EKSDGEITNSELV 345
+ D G+LLSGCQTDQ S D AYGAFS+AIQ IL K +ITN ELV
Sbjct: 291 LNAVTDNGILLSGCQTDQRSEDVY-VTRTGKAYGAFSDAIQMILSAPRKDKKKITNKELV 349
Query: 346 LKARKELERQGFTQRPGLYCSDHHVDASFVC 376
+AR L+++G++QRPGLYC D VD F+C
Sbjct: 350 SEARVFLKKRGYSQRPGLYCHDRFVDKPFIC 380
>AT5G04200.1 | Symbols: AtMC9, MC9 | metacaspase 9 |
chr5:1153893-1154870 FORWARD LENGTH=325
Length = 325
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 5 SYTEPTGKNIRRELTRLVRSAE--SGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSD 62
S +PTG NI+ L R+V A+ SGD+L HYSGHGTR+P+ IVP D
Sbjct: 60 SKVKPTGANIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFKQDEA-IVPCD 118
Query: 63 MNLITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQI 104
NLITD DFRE V ++ +G T++SDSCHSGGLI++ KEQI
Sbjct: 119 FNLITDVDFRELVNQLPKGTSFTMISDSCHSGGLIDKEKEQI 160
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 92/197 (46%), Gaps = 54/197 (27%)
Query: 179 VKNRSLPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXX 238
+ +R+LP ++D L TG D+G L ++FG DA K
Sbjct: 180 ITSRALPFKAVLDHLSSLTGITTSDIGT---HLLELFGRDAGLK---------------- 220
Query: 239 XXXXXXXXXXXXSLAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSAKRGLPDGGVL 298
F +D D +ET ++ V D G+L
Sbjct: 221 -----------------FRLPAMDLMD------LLETMTAREKHV----------DSGIL 247
Query: 299 LSGCQTDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQGFT 358
+SGCQ D+TSAD GN AYGAFSNAIQ +L +++G + N +LV+ AR LER GF
Sbjct: 248 MSGCQADETSADVG-VGN-GKAYGAFSNAIQRVLNENEGAMKNKQLVMMARDVLERLGFH 305
Query: 359 QRPGLYCSDHHVDASFV 375
Q P LYCSD + DA+F+
Sbjct: 306 QHPCLYCSDQNADATFL 322
>AT1G02170.1 | Symbols: LOL3, ATMCPB1, MCP1B, ATMC1, MC1 |
metacaspase 1 | chr1:411883-413426 FORWARD LENGTH=367
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 6 YTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM-- 63
Y PT +N+R L LV+ +GD LV HYSGHG+R + P D
Sbjct: 132 YRIPTKQNMRMALYWLVQGCTAGDSLVFHYSGHGSRQ-RNYNGDEVDGYDETLCPLDFET 190
Query: 64 -NLITDDDFRE-FVEKVSRGVKLTIVSDSCHSGGLIE 98
+I DD+ V + GVKL + D+CHSG +++
Sbjct: 191 QGMIVDDEINATIVRPLPHGVKLHSIIDACHSGTVLD 227