Miyakogusa Predicted Gene
- Lj3g3v0370470.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0370470.2 Non Chatacterized Hit- tr|I1NE18|I1NE18_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46422
PE,47.5,0.0000000000001,seg,NULL; SPOC,Spen paralogue and orthologue
SPOC, C-terminal; OS09G0516300 PROTEIN,NULL; RNA RECOGN,CUFF.40584.2
(612 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g13490.1 615 e-176
Glyma13g42060.1 531 e-151
Glyma12g05490.1 462 e-130
Glyma15g03330.1 461 e-129
Glyma20g02620.1 181 2e-45
Glyma13g03840.1 134 3e-31
Glyma20g10380.1 84 6e-16
>Glyma11g13490.1
Length = 942
Score = 615 bits (1585), Expect = e-176, Method: Compositional matrix adjust.
Identities = 359/632 (56%), Positives = 411/632 (65%), Gaps = 93/632 (14%)
Query: 20 PLAPMRPFGPQ-GHDPLISAPGFNQI---------------GPNWKRPSPPAPGMHHSSM 63
P PMRPFGP G + +IS P FN+I GPNWKRPSPPAPGM S
Sbjct: 326 PNIPMRPFGPHSGVESVISGPEFNEINALHKFQDGSSKSSMGPNWKRPSPPAPGMLSSPA 385
Query: 64 PGIRPPTRSTSGAWDLLGVNQLQRDSKRSRTNGAFPIGNLSRNIDNHGFELEQTYQIDPV 123
PG R PTRSTSGAWD+L +N + RDSKRSR +G P QTY IDP
Sbjct: 386 PGARLPTRSTSGAWDVLDINHIPRDSKRSRIDGPLP----------------QTYGIDPA 429
Query: 124 IDGGGSGPKSHLGPVGNRISAAFPGSVTSVQLDVDHIWRGIIAKGGTDMCRARCVPIGKG 183
IDGGGS V +RI+A G Q D+DHIWRG+IAKGGT +CRARCVPIGKG
Sbjct: 430 IDGGGS--------VSSRITAGVHGVA---QPDIDHIWRGVIAKGGTPVCRARCVPIGKG 478
Query: 184 IATELPDVINCAAKIRLDLLTEHYADAAGFDVVFFLPDSEADFASFTEFINYLKAKNCAG 243
I TELPDV++C+A+ LD+LT+HYADA GFD+VFFLPDSE DFAS+TEF+ YL AKN AG
Sbjct: 479 IGTELPDVVDCSARTGLDILTKHYADAIGFDIVFFLPDSEDDFASYTEFLRYLSAKNRAG 538
Query: 244 VVKFVDNTRLFLVPPSDFLTKVLRVIGPERLYGVVLKFPLNPSTTPMQQSMHLPSPSTHY 303
V KFVDNT LFLVPPSDFLT+VL+V GPERLYGVVLKFP PS+ PMQQ HL P+T Y
Sbjct: 539 VAKFVDNTTLFLVPPSDFLTRVLKVTGPERLYGVVLKFPPVPSSAPMQQPSHLRVPTTQY 598
Query: 304 MQHILPTQAEYGSISAKQEQVLPVDYNRLLHEDSKLPSKPDHRATSGLYSVRPVP----P 359
MQ I P+Q EYG I K+E +LP+DYNR LHEDSKLP+KP + T G V P P
Sbjct: 599 MQQIPPSQTEYGLIPVKEEHILPMDYNRPLHEDSKLPAKPVYPPTGGPPPVHSGPPDYAP 658
Query: 360 NNTVSE-----LLTPELIATLTSLPPATTQSSATVAAKTSVDSSTVKPRFPPFAPNDGNQ 414
NNTV+ LTPELIATL S P TTQS AT AK++V SST+KP FPP PNDGNQ
Sbjct: 659 NNTVAGSQAGVALTPELIATLASFLPTTTQSPATDGAKSAVGSSTMKPPFPPMTPNDGNQ 718
Query: 415 AHLWKQQDHQITYPTSHHPQQFGSSYNVQSAQYHFYPPASTPY-HYAQVVSGSDSYHFQD 473
+HLWK QD+QI ++H PQQ S YN+ +A Y YPPAS P + +QVVSGS H QD
Sbjct: 719 SHLWK-QDNQIADQSTHPPQQLRSMYNIHNAHYQPYPPASAPSGNPSQVVSGSS--HIQD 775
Query: 474 TAASLQQLGTVSYKPMPNFTIPSQSGQVAVSPQVGQQYHVDVSAS-------TQGTDVSI 526
TAAS+QQ G VS + MPNF +P+QSGQVAVSP Q Y V+VS S QGTD S+
Sbjct: 776 TAASMQQQGAVSSRHMPNFMMPTQSGQVAVSPHASQNYQVEVSPSNQKGFGVVQGTDASV 835
Query: 527 LYSSNRFQQPSN----FIPP------STQVPSANGLQQQTVTPYTADTADSVNSEPPKQQ 576
LY+S FQQP+N F P S QV S N QQQT PY T D VN + P Q
Sbjct: 836 LYNSQAFQQPNNNSLAFQQPNNSFALSNQVNSTNASQQQTAMPY---TVDQVNPDTPNQ- 891
Query: 577 HQLAFFGD---------------QSTLQFARN 593
QL FG QSTLQFA N
Sbjct: 892 -QLPMFGVSQGQTEVEADKNQRYQSTLQFAAN 922
>Glyma13g42060.1
Length = 829
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 291/476 (61%), Positives = 334/476 (70%), Gaps = 46/476 (9%)
Query: 2 DTFGHNRPRVPNHFPGQLP---LAPMRPFGPQGHDPLISAPGFNQIGPNWKRPSPPAPGM 58
D FGHNR VPN+FPGQLP PM PFG QG +PLIS P FN++GP+WKRPSPPAPGM
Sbjct: 294 DVFGHNRLMVPNNFPGQLPPGHNVPMGPFGSQGLEPLISGPDFNEMGPSWKRPSPPAPGM 353
Query: 59 HHSSMPG--IRPPTRSTSGAWDLLGVNQLQRDSKRSRTNGAFPIGNLSRNIDNHGFELEQ 116
S +PG I PPTRSTSGAWD+LG+NQ QRDSKRSR + A+ IG+
Sbjct: 354 LPSPVPGSGIGPPTRSTSGAWDVLGINQFQRDSKRSRIHDAWLIGD-------------- 399
Query: 117 TYQIDPVIDGGGSGPKSHLGPVGNRISAAFPGSVTSVQLDVDHIWRGIIAKGGTDMCRAR 176
P SHLGPVG RI++ P SVQ D+DHIWRGIIAKGGT +C AR
Sbjct: 400 -----------APFPLSHLGPVGTRITSGVP---DSVQPDIDHIWRGIIAKGGTPVCCAR 445
Query: 177 CVPIGKGIATELPDVINCAAKIRLDLLTEHYADAAGFDVVFFLPDSEADFASFTEFINYL 236
CVPIGKGI TE+P V++CAA+ LD+L +HYADA GFD+VFFLPDSE DFAS+TEF++YL
Sbjct: 446 CVPIGKGIGTEIPGVVDCAARTGLDMLKKHYADAIGFDIVFFLPDSEEDFASYTEFLHYL 505
Query: 237 KAKNCAGVVKFVDNTRLFLVPPSDFLTKVLRVIGPERLYGVVLKFPLNPSTTPMQQSMHL 296
KAK+ AG+ K VDNT LFLVPPSD LTKV +V GPERLYGVVLKFP PS+T MQQ+MHL
Sbjct: 506 KAKHRAGIAKLVDNTTLFLVPPSDLLTKVFKVTGPERLYGVVLKFPSVPSSTYMQQAMHL 565
Query: 297 PSPSTHYMQHILPTQAEYGSISAKQEQVLPVDYNRLLHEDSKLPSKPDHRATSGL----- 351
PSPST YMQ I P+Q EYGSISAK+EQVLP+DYNRLLHEDSK KP H ATS
Sbjct: 566 PSPSTQYMQQIPPSQVEYGSISAKEEQVLPMDYNRLLHEDSKHLPKPLHPATSVPSSSHS 625
Query: 352 ----YSVRPVPPNNTVSELLTPELIATLTSLPPATTQSSATVAAKTSVDSSTVKPRFPPF 407
Y++ + TPELIA+LTSL PATTQSS STVK FP
Sbjct: 626 VPSDYALTHTASVSQAGVTWTPELIASLTSLLPATTQSSTPGGQMGMAGPSTVKSPFPSV 685
Query: 408 APNDGNQAHLWKQQDHQITYPTSHHPQQFGSSYNVQSAQYHFYPPASTPYHYAQVV 463
APN+GNQ+HLWK QD QI P+SH PQQFGS +N AQY YPPAS+ + AQV
Sbjct: 686 APNNGNQSHLWK-QDKQIADPSSHPPQQFGSIHN---AQYQPYPPASSTDNPAQVA 737
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 42/78 (53%), Gaps = 19/78 (24%)
Query: 533 FQQPSNFIPPSTQVPSANGLQQQTVTPYTADTADSVNSEPPKQQHQLAFFGD-------- 584
FQQP+NFI S QV +A G QQQ+V PY T D VN P QQ Q A FG
Sbjct: 738 FQQPNNFISSSNQVANA-GSQQQSVIPY---TVDKVNLGPTNQQLQPALFGVGQGVSELE 793
Query: 585 -------QSTLQFARNLL 595
QSTLQFA NLL
Sbjct: 794 ADKNQRYQSTLQFAVNLL 811
>Glyma12g05490.1
Length = 850
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 302/604 (50%), Positives = 343/604 (56%), Gaps = 131/604 (21%)
Query: 23 PMRPFGPQGH-DPLISAPGFNQI---------------GPNWKRPSPPAPGMHHSSMPGI 66
PMRPFG G + +IS P FN+I GPNWKRPSPPA
Sbjct: 327 PMRPFGNHGGVESVISGPEFNEIDALHKFQDGSSKSNMGPNWKRPSPPAQS--------T 378
Query: 67 RPPTRSTSGAWDLLGVNQLQRDSKRSRTNGAFPIGNLSRNIDNHGFELEQTYQIDPVIDG 126
R PTRSTSGAWD+L N + RDSK LEQ Y IDP IDG
Sbjct: 379 RLPTRSTSGAWDVLDKNHIPRDSK----------------------PLEQAYGIDPAIDG 416
Query: 127 GGSGPKSHLGPVGNRISAAFPGSVTSVQLDVDHIWRGIIAKGGTDMCRARCVPIGKGIAT 186
GS G VQ D+DHIWRG+IAKGGT +CRARCVPIGKGI T
Sbjct: 417 NGSA-----------------GVHDIVQPDIDHIWRGVIAKGGTPVCRARCVPIGKGIGT 459
Query: 187 ELPDVINCAAKIRLDLLTEHYADAAGFDVVFFLPDSEADFASFTEFINYLKAKNCAGVVK 246
ELP V++C+A+ LD+LT+HYADA GFD+VFFLPDSE DFAS+TEF+ YL AKN AGV K
Sbjct: 460 ELPGVVDCSARTGLDILTKHYADAIGFDIVFFLPDSEDDFASYTEFLRYLSAKNRAGVAK 519
Query: 247 FVDNTRLFLVPPSDFLTKVLRVIGPERLYGVVLKFPLNPSTTPMQQSMHLPSPSTHYMQH 306
FVDNT LFLVPPSDFLT+VL+V GPERLYGVVLKFP PS+ PMQQ HLP P+T YMQH
Sbjct: 520 FVDNTTLFLVPPSDFLTRVLKVTGPERLYGVVLKFPPVPSSAPMQQPSHLPVPTTQYMQH 579
Query: 307 ILPTQAEYGSISAKQEQVLPVDYNRLLHEDSKLPSKPDHRATSGLYSVRPVPPNNTVSEL 366
I P+Q EY +H PD YS +
Sbjct: 580 IPPSQTEY------------------VHS-----GPPD-------YSTNNTVAGSQAGVA 609
Query: 367 LTPELIATLTSLPPATTQSSATVAAKTSVDSSTVKPRFPPFAPNDGNQAHLWKQQDHQIT 426
LTPELIATL SL P TTQ T AK++V SST+K FPP PNDGNQ+ HQI
Sbjct: 610 LTPELIATLASLLPTTTQLPTTDGAKSAVGSSTMKLPFPPMTPNDGNQS-------HQIA 662
Query: 427 YPTSHHPQQFGSSYNVQSAQYHFYPPASTPYHYAQVVSGSDSYHFQDTAASL-QQLGTVS 485
++H PQQ + YNV +A Y YPP S P VSGS H QDTAA++ QQ G VS
Sbjct: 663 DQSTHPPQQLRNMYNVHNAPYQPYPPLSAPAGNPAQVSGSS--HIQDTAANMQQQQGAVS 720
Query: 486 YKPMPNFTIPSQSGQVAVSPQVGQQYHVDVSASTQ-GTDVSILYSSNRFQQPSNFIPPST 544
+ MPNF +P+QSGQVAVSP Q Y V+VS S Q G V+ FQQP+N S
Sbjct: 721 SRHMPNFMMPTQSGQVAVSPHASQHYQVEVSPSNQKGFGVA-------FQQPNNSFALSN 773
Query: 545 QVPSANGLQQQTVTPYTADTADSVNSEPPKQQHQLAFFGD---------------QSTLQ 589
Q SAN QQQT Y T D VNS+ P Q QL FG QSTLQ
Sbjct: 774 QTNSANASQQQTAMLY---TVDQVNSDTPNQ--QLPMFGVSQGQTEVEADKNQRYQSTLQ 828
Query: 590 FARN 593
FA N
Sbjct: 829 FAAN 832
>Glyma15g03330.1
Length = 508
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 283/490 (57%), Positives = 319/490 (65%), Gaps = 43/490 (8%)
Query: 139 GNRISAAFPGSVTSVQLDVDHIWRGIIAKGG--TDMCRARCVPIGKGI-ATELPDVINCA 195
G +I F S ++ + V +W I T + V GI T PD+++CA
Sbjct: 11 GRQICVDFLRSQSTRRSCVPQVWFNICGSVVVYTLQIKVWMVQTITGIHLTFCPDIVDCA 70
Query: 196 AKIRLDLLTEHYADAAGFDVVFFLPDSEADFASFTEFINYLKAKNCAGVVKFVDNTRLFL 255
A+ LD+LT+HYADA GFD+VFFLPDSE DFAS+TEF+ YLKAKN AGV KFVDNT LFL
Sbjct: 71 ARTGLDMLTKHYADAIGFDIVFFLPDSEEDFASYTEFLCYLKAKNRAGVAKFVDNTTLFL 130
Query: 256 VPPSDFLTKVLRVIGPERLYGVVLKFPLNPSTTPMQQSMHLPSPSTHYMQHILPTQAEYG 315
VPPSDFLTKVL+V GPERLYGVVLKFPL PS+T MQQ MHLPSPST YMQ I P+QAEYG
Sbjct: 131 VPPSDFLTKVLKVTGPERLYGVVLKFPLVPSSTSMQQPMHLPSPSTQYMQRIPPSQAEYG 190
Query: 316 SISAKQEQVLPVDYNRLLHEDSKLPSKPDHRATSGLYSVRPVP----PNNTVSE----LL 367
SI K+EQVLP+DYNRLLHEDSK KP H AT+ S VP P T S
Sbjct: 191 SILVKEEQVLPMDYNRLLHEDSKHLPKPLHPATNVPPSAHSVPSDYAPTYTASASQAVTW 250
Query: 368 TPELIATLTSLPPATTQSSATVAAKTSVDSSTVKPRFPPFAPNDGNQAHLWKQQDHQITY 427
TPELIA+LTSL PATTQSS T S VKP FP APNDGNQ+HLWKQ QI
Sbjct: 251 TPELIASLTSLLPATTQSSTTGGPMAVAGPSIVKPSFPSVAPNDGNQSHLWKQA-QQIPD 309
Query: 428 PTSHHPQQFGSSYNVQSAQYHFYPPASTPYHYAQVVSGSDSYHFQDTAASLQQLGTVSYK 487
P+SH PQQFGS +NV QY YPPAS+ H AQVVSGS FQDT +SLQQ VS
Sbjct: 310 PSSHPPQQFGSIHNV---QYQPYPPASSTDHPAQVVSGSSC--FQDTNSSLQQPVAVSST 364
Query: 488 PMPNFTIPSQSGQVAVSPQVGQQYHVDVSAST-------QGTDVSILYSSNRFQQPSNFI 540
PM NF +P Q+GQVAVSPQV QQY V+V T QGTD S+LYSS FQQP+NFI
Sbjct: 365 PMTNFILPPQNGQVAVSPQVSQQYQVEVPHGTEKDYGVVQGTDASVLYSSKAFQQPNNFI 424
Query: 541 PPSTQVPSANGLQQQTVTPYTADTADSVNSEPPKQQHQLAFFGD---------------Q 585
S QV +A QQQ+V P+T D +SV P QQ Q A FG Q
Sbjct: 425 SSSNQVANAAS-QQQSVMPFTVDKDNSV---PTNQQPQPALFGVGQGVSELEADKNQRYQ 480
Query: 586 STLQFARNLL 595
STLQFA NLL
Sbjct: 481 STLQFAANLL 490
>Glyma20g02620.1
Length = 244
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/250 (49%), Positives = 133/250 (53%), Gaps = 69/250 (27%)
Query: 257 PPSDFLTKVLRVIGPERLYGVVLKFPLNPSTTPMQQSMHLPSPSTHYMQHILPTQAEYGS 316
P SDFLTKVL+V GPERLYGVVLKFPL PS+T MQQ MHLPSPST YMQ I QAEY
Sbjct: 1 PTSDFLTKVLKVTGPERLYGVVLKFPLVPSSTSMQQPMHLPSPSTQYMQQIPLLQAEYAV 60
Query: 317 ISAKQEQVLPVDYNRLLHEDSKLPSKPDHRATSGLYSVRPVPPNNTVSELLTPELIATLT 376
TPELIA+LT
Sbjct: 61 T-------------------------------------------------WTPELIASLT 71
Query: 377 SLPPATTQSSATVAAKTSVDSSTVKPRFPPFAPNDGNQAHLWKQQDHQITYPTSHHPQQF 436
SL ATTQSS T S VKP FP APNDGNQ+HLWK Q QI P+SH PQQF
Sbjct: 72 SLLLATTQSSTTGGPMEMAGPSIVKPSFPSVAPNDGNQSHLWK-QAQQIPDPSSHPPQQF 130
Query: 437 GSSYNVQSAQYHFYPPASTPYHYAQVVSGSDSYHFQDTAASLQQLGTVSYKPMPNFTIPS 496
GS +NV QY YP AS+ H AQVVSGS VS PM NF +P
Sbjct: 131 GSIHNV---QYQPYPHASSTDHPAQVVSGS----------------AVSCTPMTNFILPP 171
Query: 497 QSGQVAVSPQ 506
Q+GQVAVSPQ
Sbjct: 172 QNGQVAVSPQ 181
>Glyma13g03840.1
Length = 727
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Query: 161 WRGIIAKGGTDMCRARCVPIGKGIATELPDVINCAAKIRLDLLTEHYADAAGFDVVFFLP 220
W G IAKGGT +C ARC P+GK + LP+ ++C AK LD+L++HY A G VVFF+P
Sbjct: 377 WEGTIAKGGTPVCCARCFPVGKVLDMMLPEFLDCTAKTGLDMLSKHYYQAVGVWVVFFVP 436
Query: 221 DSEADFASFTEFINYLKAKNCAGVVKFVDNTRLFLVPPSDFLTKVLRVIGPERLYGVVLK 280
S+AD + EF++YL+ K A V K D T LFLVPPS+F KVL+V G + GV+L+
Sbjct: 437 GSDADMECYNEFMHYLEEKQRAAVAKLDDKTTLFLVPPSEFSEKVLKVPGRLSISGVILR 496
Query: 281 FP---LNPSTTPMQQSM 294
LN +Q+ M
Sbjct: 497 LENPDLNHGPEHIQREM 513
>Glyma20g10380.1
Length = 355
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 202 LLTEHYADAAGFDVVFFLPDSEADFASFTEFINYLKAKNCAGVVKFVDNTRLFLVPPSDF 261
+L++HY A G VVFF+P S+AD + EF++YL+ K A V K D T LFLVPPS+F
Sbjct: 1 MLSKHYYQAVGVWVVFFVPGSDADMQCYNEFMHYLEEKKRAAVSKLDDKTTLFLVPPSEF 60
Query: 262 LTKVLRVIGPERLYGVVLKF 281
K+L+V G + GV+L+
Sbjct: 61 SEKILKVPGRLSISGVILRL 80