Miyakogusa Predicted Gene

Lj3g3v0370470.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0370470.2 Non Chatacterized Hit- tr|I1NE18|I1NE18_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46422
PE,47.5,0.0000000000001,seg,NULL; SPOC,Spen paralogue and orthologue
SPOC, C-terminal; OS09G0516300 PROTEIN,NULL; RNA RECOGN,CUFF.40584.2
         (1842 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78217 similar to UniRef100_Q52ZH7 Cluster: FPA; n=2; ...   113   4e-24

>gnl|LJGI|TC78217 similar to UniRef100_Q52ZH7 Cluster: FPA; n=2; Pisum sativum|Rep: FPA
            - Pisum sativum (Garden pea), partial (19%)
          Length = 557

 Score =  113 bits (57), Expect = 4e-24
 Identities = 135/161 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1099 ttaacacctgagcttattgcaactttaacttctttaccccctgcaacaacacaatcatct 1158
            ||||||||||||||||||||||||||| |||| || |  |||||||   |||||||||||
Sbjct: 386  ttaacacctgagcttattgcaactttagcttcgtttcttcctgcaaatgcacaatcatct 445

                                                                        
Query: 1159 gccactgttgctgcaaagacatcagttgactcctcgactgtgaagccacgttttcctcct 1218
            ||| ||| || ||||||  || |||  | ||||| || ||||||||| |  |||||||||
Sbjct: 446  gcccctgatggtgcaaatccagcaggaggctccttgaatgtgaagcctccatttcctcct 505

                                                     
Query: 1219 tttgcacctaatgatggaaaccaagctcatttatggaaaca 1259
            |  ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 506  tcggcacctaatgatggaaaccaatctcatttgtggaaaca 546