Miyakogusa Predicted Gene

Lj3g3v0370450.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0370450.1 tr|B9MY69|B9MY69_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_594552 PE=4
SV=1,67.53,2e-19,DUF936,Protein of unknown function DUF936, plant;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.40845.1
         (236 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81786 similar to UniRef100_A9U357 Cluster: Predicted ...   153   6e-37

>gnl|LJGI|TC81786 similar to UniRef100_A9U357 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (5%)
          Length = 721

 Score =  153 bits (77), Expect = 6e-37
 Identities = 145/167 (86%), Gaps = 3/167 (1%)
 Strand = Plus / Plus

                                                                       
Query: 70  gagggagaatcatgccagattccagcagagacgattgaccgactaaggaagaagatatac 129
           ||||||||||| || ||||| || ||||||||||||||||  || || ||||||||||| 
Sbjct: 189 gagggagaatcgtgtcagataccggcagagacgattgaccagctcagaaagaagatatat 248

                                                                       
Query: 130 gaatatcttcttactcatgttgagtctgctgctgctgcactcagtggtggaccacaatca 189
           || |||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||
Sbjct: 249 gagtatcttcttactcatgttgaatctgctgctgctgcactcagtggtggatcacagtca 308

                                                          
Query: 190 tcatcaactccgatccaaacaacacagattaaaggcaaaaggtgaat 236
           | | |   || ||| ||||||||  ||||||||||||||||||||||
Sbjct: 309 ttacc---tcagattcaaacaactgagattaaaggcaaaaggtgaat 352