Miyakogusa Predicted Gene
- Lj3g3v0290120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0290120.1 Non Chatacterized Hit- tr|F6HY95|F6HY95_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.22,0.0000000003,AUX_IAA,AUX/IAA protein;
IAA_ARF,Aux/IAA-ARF-dimerisation; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAME,CUFF.40435.1
(322 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 263 2e-70
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 233 1e-61
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated prot... 135 3e-32
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 132 2e-31
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 132 2e-31
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 131 7e-31
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 129 2e-30
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 129 2e-30
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 129 3e-30
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 127 8e-30
AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein ... 120 2e-27
AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein ... 120 2e-27
AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein ... 119 2e-27
AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein ... 119 2e-27
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 119 2e-27
AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein... 118 6e-27
AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 115 6e-26
AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 115 6e-26
AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional reg... 114 6e-26
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 112 4e-25
AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein... 111 8e-25
AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 110 1e-24
AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducib... 110 2e-24
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 102 5e-22
AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid induci... 97 1e-20
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 92 6e-19
AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 | chr... 89 3e-18
AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 88 8e-18
AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15... 84 2e-16
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-aceti... 80 1e-15
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 79 4e-15
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 79 4e-15
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 79 5e-15
AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducib... 76 3e-14
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 74 1e-13
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 74 1e-13
AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29... 69 6e-12
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 64 2e-10
AT1G04550.1 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 64 2e-10
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 64 2e-10
AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32... 64 2e-10
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 63 2e-10
AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34... 62 4e-10
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 61 1e-09
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 60 2e-09
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 60 2e-09
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 60 2e-09
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 60 2e-09
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 60 2e-09
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 57 2e-08
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 57 2e-08
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 57 2e-08
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 57 2e-08
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 55 4e-08
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 55 5e-08
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 55 5e-08
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 54 1e-07
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 54 1e-07
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 53 2e-07
AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33... 53 3e-07
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 52 4e-07
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 52 5e-07
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 52 6e-07
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 52 7e-07
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 49 3e-06
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 188/312 (60%), Gaps = 64/312 (20%)
Query: 8 EVSPQLLDLIPNEREWHMKKGEGGKSSEERKLELRLGPPG--VEDWSLNDKMKNTQTDHE 65
E+ P+LLDLIP R+W+ + + + +E+KLELRLGPPG ED S K KNT+
Sbjct: 9 EIGPKLLDLIPQGRKWYQE--DKNNTDQEKKLELRLGPPGGDEEDHSAIKK-KNTE---- 61
Query: 66 SLLSLGYYYPMMPHSAKLSSNNGFHSYQHHHQGSKATSFLHHTSSQTCGPKVVELQQNKG 125
+ + K + + FH + +H
Sbjct: 62 -----------IRNIKKETEDKSFHCFNGNH----------------------------- 81
Query: 126 SDNNNKVFSSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSKPPPHESQN 185
SPS+ T+VP+ SQKRTAPGPVVGWPP+RSFRKNLAS+S+S
Sbjct: 82 --------FSPSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGG 133
Query: 186 QHDKGD-GKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQ 244
Q +K D G+K V +GMFVKINMDGVPIGRKVDLNAY SYE LS VD LFRGLLAAQ
Sbjct: 134 QINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQ 193
Query: 245 RDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVL 304
RD S G EEK I GLLDG GE+TL YEDNEGD+MLVGDVPW MFVS+VKRLRV+
Sbjct: 194 RDISDG-----QGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVI 248
Query: 305 KSSEL-SAFTSG 315
KSSE+ SA T G
Sbjct: 249 KSSEISSALTFG 260
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/326 (47%), Positives = 183/326 (56%), Gaps = 77/326 (23%)
Query: 1 MDERSRN-EVSPQLLDL-IPNERE-WHMKKGEGGKSSEERKLELRLGPPGVEDWSLNDKM 57
M+ SRN E+SP+LLDL IP ER W + +EE+KLEL+LGPPG ED
Sbjct: 1 MEGYSRNGEISPKLLDLMIPQERRNWFHDEKNSVFKTEEKKLELKLGPPGEED------- 53
Query: 58 KNTQTDHESLLSLGYYYPMMPHSAKLSSNNGFHSYQHHHQGSKATSFLHHTSSQTCGPKV 117
D ES++ +H + K S L
Sbjct: 54 -----DDESMI------------------------RHMKKEPKDKSILSLAGK------- 77
Query: 118 VELQQNKGSDNNNKVFSSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSK 177
+ SPSS T +S KRTAPGPVVGWPP+RSFRKNLAS S+S
Sbjct: 78 ---------------YFSPSSTKT----TSHKRTAPGPVVGWPPVRSFRKNLASGSSSKL 118
Query: 178 PPPHESQN----QHDKGDGKKPVNNYGK--GMFVKINMDGVPIGRKVDLNAYGSYESLSS 231
+ N ++ K D + GMFVKINM GVPIGRKVDL+A+ SYE LS
Sbjct: 119 GNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSF 178
Query: 232 AVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPW 291
VD LFRGLLAAQRD + E+EK ITGLLDG+GEYTL YEDNEGD+MLVGDVPW
Sbjct: 179 TVDKLFRGLLAAQRDFPSS-----IEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPW 233
Query: 292 HMFVSTVKRLRVLKSSEL-SAFTSGN 316
MFVS+VKRLRV+K+SE+ SA T GN
Sbjct: 234 QMFVSSVKRLRVIKTSEISSALTYGN 259
>AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein
2 | chr4:14323665-14325213 REVERSE LENGTH=305
Length = 305
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 107/188 (56%), Gaps = 19/188 (10%)
Query: 127 DNNNKVFSSPSSANTAVPNSSQKRTAPGP-----VVGWPPIRSFRKNLASSSTSSKPPPH 181
D + F+ P AVP +K +A P VVGWPPIRSFRKN +SS S KP +
Sbjct: 115 DGKSTTFTKP-----AVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNN 169
Query: 182 -ESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGL 240
E++ K ++P ++VK++M+G P RK+DL Y SY LSSA++ +F
Sbjct: 170 SETEEAEAKSGPEQPC------LYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCF 223
Query: 241 LAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKR 300
Q S GG E +T LL GS EY + YED + D MLVGDVPW MF+ + K+
Sbjct: 224 TIGQF-GSHGGCGRDGLNESRLTDLLRGS-EYVVTYEDKDSDWMLVGDVPWEMFICSCKK 281
Query: 301 LRVLKSSE 308
LR++KSSE
Sbjct: 282 LRIMKSSE 289
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 110/191 (57%), Gaps = 23/191 (12%)
Query: 135 SPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDK----- 189
S S A ++ P SSQ VVGWPPI S R N ++ ++K E + K
Sbjct: 62 SASHAGSSPPRSSQ-------VVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDE 114
Query: 190 -GDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAV-DALFRGLLAAQRDA 247
D K VN + F+K+NMDGV IGRKVDLNA+ SYE+L+ + D FR
Sbjct: 115 PKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFR--------T 166
Query: 248 SAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSS 307
+ G V + K + LLDGS E+ L YED EGD MLVGDVPW MF+++VKRLRV+K+S
Sbjct: 167 NPGTVGLTSQFTKPLR-LLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTS 225
Query: 308 ELSAFTSGNKQ 318
E + + N++
Sbjct: 226 EANGLAARNQE 236
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 110/191 (57%), Gaps = 23/191 (12%)
Query: 135 SPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDK----- 189
S S A ++ P SSQ VVGWPPI S R N ++ ++K E + K
Sbjct: 62 SASHAGSSPPRSSQ-------VVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDE 114
Query: 190 -GDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAV-DALFRGLLAAQRDA 247
D K VN + F+K+NMDGV IGRKVDLNA+ SYE+L+ + D FR
Sbjct: 115 PKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFR--------T 166
Query: 248 SAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSS 307
+ G V + K + LLDGS E+ L YED EGD MLVGDVPW MF+++VKRLRV+K+S
Sbjct: 167 NPGTVGLTSQFTKPLR-LLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTS 225
Query: 308 ELSAFTSGNKQ 318
E + + N++
Sbjct: 226 EANGLAARNQE 236
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 110/191 (57%), Gaps = 22/191 (11%)
Query: 135 SPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDK----- 189
S S A ++ P SS + VVGWPPI S R N ++ ++K E + K
Sbjct: 62 SASHAGSSPPRSSSQ------VVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDE 115
Query: 190 -GDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAV-DALFRGLLAAQRDA 247
D K VN + F+K+NMDGV IGRKVDLNA+ SYE+L+ + D FR
Sbjct: 116 PKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFR--------T 167
Query: 248 SAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSS 307
+ G V + K + LLDGS E+ L YED EGD MLVGDVPW MF+++VKRLRV+K+S
Sbjct: 168 NPGTVGLTSQFTKPLR-LLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTS 226
Query: 308 ELSAFTSGNKQ 318
E + + N++
Sbjct: 227 EANGLAARNQE 237
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 99/171 (57%), Gaps = 20/171 (11%)
Query: 149 KRTA------PGPVVGWPPIRSFRKN----LASSSTSSKPPPHESQNQH-DKGDGKKPVN 197
KRTA G VVGWPPIR++R N A +S + P SQ + ++ D K N
Sbjct: 76 KRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRN 135
Query: 198 NYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPE 257
+ MFVK+ MDG+PIGRK+DLNA+ YESLS+ ++ +F R G P
Sbjct: 136 S----MFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETP- 190
Query: 258 EEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
+ L DGS L YED EGD MLVGDVPW MF+ +V+RLR++K+SE
Sbjct: 191 ----VKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 99/171 (57%), Gaps = 20/171 (11%)
Query: 149 KRTA------PGPVVGWPPIRSFRKN----LASSSTSSKPPPHESQNQH-DKGDGKKPVN 197
KRTA G VVGWPPIR++R N A +S + P SQ + ++ D K N
Sbjct: 76 KRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRN 135
Query: 198 NYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPE 257
+ MFVK+ MDG+PIGRK+DLNA+ YESLS+ ++ +F R G P
Sbjct: 136 S----MFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETP- 190
Query: 258 EEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
+ L DGS L YED EGD MLVGDVPW MF+ +V+RLR++K+SE
Sbjct: 191 ----VKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 99/171 (57%), Gaps = 20/171 (11%)
Query: 149 KRTA------PGPVVGWPPIRSFRKN----LASSSTSSKPPPHESQNQH-DKGDGKKPVN 197
KRTA G VVGWPPIR++R N A +S + P SQ + ++ D K N
Sbjct: 76 KRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRN 135
Query: 198 NYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPE 257
+ MFVK+ MDG+PIGRK+DLNA+ YESLS+ ++ +F R G P
Sbjct: 136 S----MFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETP- 190
Query: 258 EEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
+ L DGS L YED EGD MLVGDVPW MF+ +V+RLR++K+SE
Sbjct: 191 ----VKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 104/194 (53%), Gaps = 40/194 (20%)
Query: 126 SDNNNKVFSSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSKPPPHESQN 185
+ NNN S S+ S R PVVGWPP+RS R+NL + +
Sbjct: 19 TSNNNINGSKQKSSTKETSFLSNNRVEVAPVVGWPPVRSSRRNLTAQLKEEMKKKESDE- 77
Query: 186 QHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQR 245
K ++VKINM+GVPIGRKV+L+AY +Y+ LS AVD LF +++
Sbjct: 78 --------------EKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF-----SKK 118
Query: 246 DASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 305
D+ D + +YTLVYED EGD++LVGDVPW MFVSTVKRL VLK
Sbjct: 119 DS------------------WDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLK 160
Query: 306 SSELSAFTSGNKQH 319
+S AF+ ++H
Sbjct: 161 TSH--AFSLSPRKH 172
>AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9636877-9638459 FORWARD LENGTH=338
Length = 338
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 23/161 (14%)
Query: 152 APGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKGMFVKINMDG 211
A VVGWPPIRS+RKN +SSTS D+ DGK + +FVK++MDG
Sbjct: 179 AKAQVVGWPPIRSYRKNTMASSTS---------KNTDEVDGKPGLGV----LFVKVSMDG 225
Query: 212 VPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKA----ITGLLD 267
P RKVDL Y SY+ LSSA++ +F Q G+H E+ + LL
Sbjct: 226 APYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQ-----CGLHGAQGRERMSEIKLKDLLH 280
Query: 268 GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
GS E+ L YED +GD MLVGDVPW +F T ++L+++K S+
Sbjct: 281 GS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 320
>AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=319
Length = 319
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 23/161 (14%)
Query: 152 APGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKGMFVKINMDG 211
A VVGWPPIRS+RKN +SSTS D+ DGK + +FVK++MDG
Sbjct: 162 AKAQVVGWPPIRSYRKNTMASSTS---------KNTDEVDGKPGLGV----LFVKVSMDG 208
Query: 212 VPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKA----ITGLLD 267
P RKVDL Y SY+ LSSA++ +F Q G+H E+ + LL
Sbjct: 209 APYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQ-----CGLHGAQGRERMSEIKLKDLLH 263
Query: 268 GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
GS E+ L YED +GD MLVGDVPW +F T ++L+++K S+
Sbjct: 264 GS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 303
>AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 23/161 (14%)
Query: 152 APGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKGMFVKINMDG 211
A VVGWPPIRS+RKN +SSTS D+ DGK + +FVK++MDG
Sbjct: 162 AKAQVVGWPPIRSYRKNTMASSTS---------KNTDEVDGKPGLGV----LFVKVSMDG 208
Query: 212 VPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKA----ITGLLD 267
P RKVDL Y SY+ LSSA++ +F Q G+H E+ + LL
Sbjct: 209 APYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQ-----CGLHGAQGRERMSEIKLKDLLH 263
Query: 268 GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
GS E+ L YED +GD MLVGDVPW +F T ++L+++K S+
Sbjct: 264 GS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 303
>AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 23/161 (14%)
Query: 152 APGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKGMFVKINMDG 211
A VVGWPPIRS+RKN +SSTS D+ DGK + +FVK++MDG
Sbjct: 162 AKAQVVGWPPIRSYRKNTMASSTS---------KNTDEVDGKPGLGV----LFVKVSMDG 208
Query: 212 VPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKA----ITGLLD 267
P RKVDL Y SY+ LSSA++ +F Q G+H E+ + LL
Sbjct: 209 APYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQ-----CGLHGAQGRERMSEIKLKDLLH 263
Query: 268 GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
GS E+ L YED +GD MLVGDVPW +F T ++L+++K S+
Sbjct: 264 GS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 303
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 33/208 (15%)
Query: 122 QNKGSDNNNKVFSSPSSANTAVPNSSQKRTAP--GPVVGWPPIRSFRKNLASSSTSSKPP 179
+ +G K F S S +A +S Q + P VVGWPPI R N ++ + K
Sbjct: 34 KERGRILTAKDFPSVGSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAA 93
Query: 180 PHESQNQHDKGDGKKPV-------------NNYGKGM-FVKINMDGVPIGRKVDLNAYGS 225
E +GDG+K V N +G+ FVK+NMDGV IGRKVD+ A+ S
Sbjct: 94 RAE------EGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSS 147
Query: 226 YESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRML 285
YE+L+ ++ +F G+ E+ LLDGS ++ L YED EGD ML
Sbjct: 148 YENLAQTLEEMFFGMTGTT-----------CREKVKPLRLLDGSSDFVLTYEDKEGDWML 196
Query: 286 VGDVPWHMFVSTVKRLRVLKSSELSAFT 313
VGDVPW MF+++VKRLR++ +SE S
Sbjct: 197 VGDVPWRMFINSVKRLRIMGTSEASGLA 224
>AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein 10
| chr1:1059809-1061026 FORWARD LENGTH=261
Length = 261
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 13/162 (8%)
Query: 157 VGWPPIRSFR--------KNLASS---STSSKPPPHESQNQHDKGDGKKPVNNYGKGMFV 205
VGWPP+R++R K+LA+ S+ + +S K D + + M V
Sbjct: 95 VGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLV 154
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ MDGV IGRKVDLNA SY +L +D +F + + ++ G K +E + L
Sbjct: 155 KVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGY--KTIKETCTSKL 212
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSS 307
LDGS EY + Y+D +GD MLVGDVPW MF+ +V RLR++K+S
Sbjct: 213 LDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTS 254
>AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=336
Length = 336
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 20/159 (12%)
Query: 152 APGPVVGWPPIRSFRKN-LASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKG-MFVKINM 209
A +VGWPP+RS+RKN LA++ +S D+ DG+ G G +FVK++M
Sbjct: 180 AKAQIVGWPPVRSYRKNTLATTCKNS-----------DEVDGRP-----GSGALFVKVSM 223
Query: 210 DGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLDGS 269
DG P RKVDL +Y +Y LSSA++ +F Q S G E + LL+G
Sbjct: 224 DGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQC-GSNGAAGKDMLSETKLKDLLNGK 282
Query: 270 GEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
+Y L YED +GD MLVGDVPW MF+ K+L+++K +
Sbjct: 283 -DYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCD 320
>AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=338
Length = 338
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 20/159 (12%)
Query: 152 APGPVVGWPPIRSFRKN-LASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKG-MFVKINM 209
A +VGWPP+RS+RKN LA++ +S D+ DG+ G G +FVK++M
Sbjct: 180 AKAQIVGWPPVRSYRKNTLATTCKNS-----------DEVDGRP-----GSGALFVKVSM 223
Query: 210 DGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLDGS 269
DG P RKVDL +Y +Y LSSA++ +F Q S G E + LL+G
Sbjct: 224 DGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQC-GSNGAAGKDMLSETKLKDLLNGK 282
Query: 270 GEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
+Y L YED +GD MLVGDVPW MF+ K+L+++K +
Sbjct: 283 -DYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCD 320
>AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional
regulator family protein | chr1:1136382-1138340 FORWARD
LENGTH=229
Length = 229
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 123 NKGSDNNNKVFSSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSKPPPHE 182
NK + V + S +A P K A VVGWPP+RS+RKN+ S S P
Sbjct: 50 NKEGSTTHDVVTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEA 109
Query: 183 SQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLA 242
+ FVK++MDG P RK+DL Y SY+ LS+A+ +F
Sbjct: 110 AA-------------------FVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTM 150
Query: 243 AQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLR 302
+ G + E+ + L++ S +Y YED +GD MLVGDVPW MFV T KRLR
Sbjct: 151 GKHGGEEGMIDFM--NERKLMDLVN-SWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLR 207
Query: 303 VLKSSE 308
++K S+
Sbjct: 208 LMKGSD 213
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 43/195 (22%)
Query: 126 SDNNNKVFSSPSSANTAVPNSSQKRTAP---GPVVGWPPIRSFRKNLASSSTSSKPPPHE 182
+NNNK S + +S + T+P +VGWPP+RS+RKN S +
Sbjct: 32 CNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQIVGWPPVRSYRKNNIQS--------KK 83
Query: 183 SQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLA 242
++++H+ G+G++VK++MDG P RK+DL+ Y Y L A++ +F+ +
Sbjct: 84 NESEHE-----------GQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVG 132
Query: 243 A--QRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKR 300
+RD G ++ YED +GD ML+GDVPW MF+ T KR
Sbjct: 133 EYFERDGYKGS-------------------DFVPTYEDKDGDWMLIGDVPWEMFICTCKR 173
Query: 301 LRVLKSSELSAFTSG 315
LR++K SE G
Sbjct: 174 LRIMKGSEAKGLGCG 188
>AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein 16
| chr3:1288993-1290415 REVERSE LENGTH=236
Length = 236
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 11/161 (6%)
Query: 152 APGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKGM----FVKI 207
A VVGWPP+RSFRKN+ S KP ++ +DK G + +VK+
Sbjct: 67 AKAQVVGWPPVRSFRKNVMSGQ---KPTTGDATEGNDKTSGSSGATSSASACATVAYVKV 123
Query: 208 NMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLD 267
+MDG P RK+DL Y +Y+ LS+A+ +F + G+ + E K I LL+
Sbjct: 124 SMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIG--NYGPQGMKDFMNESKLID-LLN 180
Query: 268 GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
GS +Y YED +GD MLVGDVPW MFV + KR+R++K SE
Sbjct: 181 GS-DYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSE 220
>AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196716 FORWARD LENGTH=243
Length = 243
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 98/192 (51%), Gaps = 10/192 (5%)
Query: 117 VVELQQNKGSDNNNKVFSSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSS 176
++ LQ NK + K S+ T + + S K A VVGWPP+R++RKN+ + +S
Sbjct: 45 MLNLQSNKEGSVDLKNVSAVPKEKTTLKDPS-KPPAKAQVVGWPPVRNYRKNMMTQQKTS 103
Query: 177 KPPPHESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDAL 236
S + G VK++MDG P RKVDL Y SY+ LS A+ +
Sbjct: 104 SGAEEASSEKAGNFGGGAAGAG-----LVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKM 158
Query: 237 FRGLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVS 296
F + A G+ + E K + L S EY YED +GD MLVGDVPW MFV
Sbjct: 159 FSSFTMG--NYGAQGMIDFMNESKLMNLL--NSSEYVPSYEDKDGDWMLVGDVPWEMFVE 214
Query: 297 TVKRLRVLKSSE 308
+ KRLR++K SE
Sbjct: 215 SCKRLRIMKGSE 226
>AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducible
14 | chr4:8348521-8349923 REVERSE LENGTH=228
Length = 228
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 85/157 (54%), Gaps = 17/157 (10%)
Query: 152 APGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKGMFVKINMDG 211
A VVGWPP+R++RKN+ ++ S E++ G G FVK++MDG
Sbjct: 73 AKAQVVGWPPVRNYRKNVMANQKSG-----EAEEAMSSGGGTVA--------FVKVSMDG 119
Query: 212 VPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLDGSGE 271
P RKVDL Y SY+ LS A+ +F A G+ + E K + L S E
Sbjct: 120 APYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQ--GMIDFMNESKVMD--LLNSSE 175
Query: 272 YTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
Y YED +GD MLVGDVPW MFV + KRLR++K SE
Sbjct: 176 YVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSE 212
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 47/193 (24%)
Query: 128 NNNKVFSSPSSANTAVPNSSQKRTAPGP---VVGWPPIRSFRKNLASSSTSSKPPPHESQ 184
+N +V P + + ++ + TA P +VGWPP+RS+RKN + S ES+
Sbjct: 34 SNKRVL--PEATEKEIESTGKTETASPPKAQIVGWPPVRSYRKNNVQTKKS------ESE 85
Query: 185 NQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAA- 243
G+G +VK++MDG P RK+DL Y Y L +++ +F+ +
Sbjct: 86 ---------------GQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEY 130
Query: 244 -QRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLR 302
+R+ G ++ YED +GD MLVGDVPW MFVS+ KRLR
Sbjct: 131 FEREGYKGS-------------------DFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLR 171
Query: 303 VLKSSELSAFTSG 315
++K SE+ G
Sbjct: 172 IMKGSEVKGLGCG 184
>AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid inducible
19 | chr3:5264100-5265378 FORWARD LENGTH=197
Length = 197
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 43/196 (21%)
Query: 119 ELQQNKGSDNNNKVFSSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSKP 178
E+ N+++ S S+ + A VVGWPP+ S+RK + S+
Sbjct: 34 EMNMTSSGSNSDQCESGVVSSGGDAEKVNDSPAAKSQVVGWPPVCSYRKKNSCKEAST-- 91
Query: 179 PPHESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALF- 237
G G +VK++MDGVP RK+DL + Y+ L+ A+D LF
Sbjct: 92 ------------------TKVGLG-YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFG 132
Query: 238 -RGLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVS 296
RG+ A +D + EY +YED +GD ML GDVPW MF+
Sbjct: 133 FRGIGVALKDGD--------------------NCEYVTIYEDKDGDWMLAGDVPWGMFLE 172
Query: 297 TVKRLRVLKSSELSAF 312
+ KRLR++K S+ + F
Sbjct: 173 SCKRLRIMKRSDATGF 188
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 53/187 (28%)
Query: 128 NNNKVFSSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSKPPPHESQNQH 187
NN ++F + P + + +VGWPP+RS RKN S S
Sbjct: 39 NNKRLFEETRDEEESTPPTKTQ------IVGWPPVRSSRKNNNSVS-------------- 78
Query: 188 DKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDA 247
+VK++MDG P RK+DL Y +Y L A++ +F+ ++
Sbjct: 79 ----------------YVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMI------ 116
Query: 248 SAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSS 307
G + + E K GSG + YED +GD MLVGDVPW MF S+ KRLR++K S
Sbjct: 117 ---GEYCEREGYK-------GSG-FVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGS 165
Query: 308 ELSAFTS 314
+ A S
Sbjct: 166 DAPALDS 172
>AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 |
chr1:19672670-19673559 REVERSE LENGTH=189
Length = 189
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 87/187 (46%), Gaps = 51/187 (27%)
Query: 126 SDNNNKVFSSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSSKPPPHESQN 185
++N N V SS + V S VGWPP+ S+R+ ++
Sbjct: 49 TENENSVVSSVEDESLPVVKSQA--------VGWPPVCSYRR-------------KKNNE 87
Query: 186 QHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQR 245
+ K G +VK++MDGVP RK+DL + SY +L + ++ LF L
Sbjct: 88 EASKAIG-----------YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCL----- 131
Query: 246 DASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 305
G+ E +K EY ++YED + D MLVGDVPW MF + KRLR++K
Sbjct: 132 -----GIGVAKEGKKC---------EYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVK 177
Query: 306 SSELSAF 312
S+ + F
Sbjct: 178 RSDATGF 184
>AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196214 FORWARD LENGTH=210
Length = 210
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 117 VVELQQNKGSDNNNKVFSSPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSS 176
++ LQ NK + K S+ T + + S K A VVGWPP+R++RKN+ + +S
Sbjct: 45 MLNLQSNKEGSVDLKNVSAVPKEKTTLKDPS-KPPAKAQVVGWPPVRNYRKNMMTQQKTS 103
Query: 177 KPPPHESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDAL 236
S + G VK++MDG P RKVDL Y SY+ LS A+ +
Sbjct: 104 SGAEEASSEKAGNFGGGAAGAG-----LVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKM 158
Query: 237 FRGLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWH 292
F + A G+ + E K + L S EY YED +GD MLVGDVPW
Sbjct: 159 FSSFTMG--NYGAQGMIDFMNESKLMNLL--NSSEYVPSYEDKDGDWMLVGDVPWE 210
>AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15 |
chr1:30221780-30222702 REVERSE LENGTH=179
Length = 179
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 48/153 (31%)
Query: 156 VVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIG 215
+VGWPP+ + RK + +VK+ +DG
Sbjct: 71 LVGWPPVATARKTVRRK-------------------------------YVKVALDGAAYL 99
Query: 216 RKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLV 275
RKVDL Y Y L +A++ +F+G++ R L+ GE+
Sbjct: 100 RKVDLGMYDCYGQLFTALENMFQGIITICRVTE-----------------LERKGEFVAT 142
Query: 276 YEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
YED +GD MLVGDVPW MFV + KR+R++K+ +
Sbjct: 143 YEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGD 175
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-acetic
acid inducible 5 | chr1:5365764-5366460 REVERSE
LENGTH=163
Length = 163
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 46/152 (30%)
Query: 156 VVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIG 215
VVGWPP+ S+R+ + T S +VK+++DG
Sbjct: 54 VVGWPPVCSYRRKNSLERTKSS--------------------------YVKVSVDGAAFL 87
Query: 216 RKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLV 275
RK+DL Y Y+ L+SA+ LF G N + K E +
Sbjct: 88 RKIDLEMYKCYQDLASALQILF------------GCYINFDDTLK--------ESECVPI 127
Query: 276 YEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSS 307
YED +GD ML GDVPW MF+ + KRLR++K S
Sbjct: 128 YEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 47/170 (27%)
Query: 138 SANTAVPNSSQKRTAPGPVVGWPPIRS-FRKNLASSSTSSKPPPHESQNQHDKGDGKKPV 196
S + P++S +R A WPPI+S R L + + +GD
Sbjct: 30 SLSLTFPSTSPQREARQ---DWPPIKSRLRDTL------------KGRRLLRRGDDT--- 71
Query: 197 NNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALF-RGLLAAQRDASAGGVHNK 255
+FVK+ M+GVPIGRK+DL + YESL + +F ++ RD
Sbjct: 72 -----SLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRK------- 119
Query: 256 PEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 305
+ L YED +GD M+VGD+PW MF+ TV+RL++ +
Sbjct: 120 ---------------HHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 21/106 (19%)
Query: 203 MFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRG--LLAAQRDASAGGVHNKPEEEK 260
+VK+NM+GVPIGRK+DL + Y L +D +F L A + D EK
Sbjct: 85 FYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMC---------NEK 135
Query: 261 AITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKS 306
+ + L Y D EGD M+VGDVPW MF+STV+RL++ ++
Sbjct: 136 S----------HVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRA 171
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 21/106 (19%)
Query: 203 MFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRG--LLAAQRDASAGGVHNKPEEEK 260
+VK+NM+GVPIGRK+DL + Y L + +D +F L A + D + EK
Sbjct: 83 FYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCS---------EK 133
Query: 261 AITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKS 306
+ + L Y D EGD M+VGDVPW MF+S+V+RL++ ++
Sbjct: 134 S----------HVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISRA 169
>AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible
| chr4:8361182-8361780 FORWARD LENGTH=168
Length = 168
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 17/105 (16%)
Query: 204 FVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAIT 263
+VK++MDG P RK+DL Y +Y L A++ +F+ + G +++ E K
Sbjct: 76 YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTV---------GEYSEREGYK--- 123
Query: 264 GLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
GSG + YED +GD MLVGDVPW MF S+ ++LR++K SE
Sbjct: 124 ----GSG-FVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ M GVP+GR VDLNA Y L ++ LF I G
Sbjct: 525 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLF-----------------------DIKGE 561
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTSGNK 317
L ++ +V+ D+EGD MLVGD PW F + VKR+ + E+ T GN+
Sbjct: 562 LRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQ 613
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ M GVP+GR VDLNA Y L ++ LF I G
Sbjct: 527 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLF-----------------------DIKGE 563
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTSGNK 317
L ++ +V+ D+EGD MLVGD PW F + VKR+ + E+ T GN+
Sbjct: 564 LRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQ 615
>AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29 |
chr4:15583479-15584628 FORWARD LENGTH=251
Length = 251
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 42/169 (24%)
Query: 156 VVGWPPIRSFRKNLASSSTSSKPPPHESQNQHDKGDGKKPVNN----------------- 198
VVGWPP+++ S H H +G +NN
Sbjct: 95 VVGWPPVKTCMIKYGSYHHRHIRNHHHCPYHH-RGRRITAMNNNISNPTTATVGSSSSSS 153
Query: 199 --YGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKP 256
M+VK+ MDGV I RKVD+ + SYESL++++ +F R+ +
Sbjct: 154 ISSRSSMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDT-------- 205
Query: 257 EEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 305
YT ++ EGD +L GDV W +F +V R+ +++
Sbjct: 206 --------------NYTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIR 240
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 23/105 (21%)
Query: 205 VKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITG 264
+K+ M G +GR VDL SY+ L ++ +F I G
Sbjct: 406 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFE-----------------------IEG 442
Query: 265 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL 309
L ++ +V+ D+EGDRMLVGD PW+ F K+L + S E+
Sbjct: 443 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 487
>AT1G04550.1 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241375 FORWARD
LENGTH=173
Length = 173
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 22/135 (16%)
Query: 122 QNKGSDNNNKVFSSPSSANTAVPNSSQKRTAP--GPVVGWPPIRSFRKNLASSSTSSKPP 179
+ +G K F S S +A +S Q + P VVGWPPI R N ++ + K
Sbjct: 34 KERGRILTAKDFPSVGSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAA 93
Query: 180 PHESQNQHDKGDGKKPV-------------NNYGKGM-FVKINMDGVPIGRKVDLNAYGS 225
E +GDG+K V N +G+ FVK+NMDGV IGRKVD+ A+ S
Sbjct: 94 RAE------EGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSS 147
Query: 226 YESLSSAVDALFRGL 240
YE+L+ ++ +F G+
Sbjct: 148 YENLAQTLEEMFFGM 162
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 23/105 (21%)
Query: 205 VKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITG 264
+K+ M G +GR VDL SY+ L ++ +F I G
Sbjct: 493 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFE-----------------------IEG 529
Query: 265 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL 309
L ++ +V+ D+EGDRMLVGD PW+ F K+L + S E+
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 574
>AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32 |
chr2:118385-119219 FORWARD LENGTH=191
Length = 191
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 200 GKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEE 259
GK +VK+N+DG+ +GRKV L G+Y +L+ ++ +F G+ + G+
Sbjct: 96 GKYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMF-GM------QTVSGLR------ 142
Query: 260 KAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
L E++LVY D EG VGDVPW FV +V R+R+ + ++
Sbjct: 143 -----LFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRND 186
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 205 VKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITG 264
+K+ M G +GR VDL SY+ L ++ +F I G
Sbjct: 514 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFE-----------------------IEG 550
Query: 265 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTS 314
L ++ +V+ D+EGDRMLVGD PW+ F K+L + S E+ S
Sbjct: 551 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRS 600
>AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34 |
chr1:5182256-5183243 REVERSE LENGTH=185
Length = 185
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 21/120 (17%)
Query: 192 GKKPVNNYG---KGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDAS 248
G++ +N G K +VK+ MDG+ +GRKV + +GSY +L+ ++ +F G+ S
Sbjct: 79 GQRYCSNEGYRRKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMF-GM------QS 131
Query: 249 AGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSE 308
G+ L E+ LVY D EG GDVPW+ F+ +V+RLR+ + ++
Sbjct: 132 VSGLR-----------LFQMESEFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRND 180
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 23/112 (20%)
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ M G+ +GR VDL SY+ L ++ +F I G
Sbjct: 493 KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFE-----------------------IQGQ 529
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTSGNK 317
L ++ +V+ D+EGD ML GD PW+ F K++ + S E+ T+ K
Sbjct: 530 LLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLK 581
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 31/139 (22%)
Query: 180 PHESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFR- 238
P ++ N H K D + N+ K++ G+ +GR VDL+ + +YE L + +D LF
Sbjct: 714 PFQTNNPHPK-DAQTKTNS--SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEF 770
Query: 239 --GLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVS 296
L+A ++D + +VY D E D MLVGD PW F
Sbjct: 771 NGELMAPKKD-------------------------WLIVYTDEENDMMLVGDDPWQEFCC 805
Query: 297 TVKRLRVLKSSELSAFTSG 315
V+++ + E+ G
Sbjct: 806 MVRKIFIYTKEEVRKMNPG 824
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 31/139 (22%)
Query: 180 PHESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFR- 238
P ++ N H K D + N+ K++ G+ +GR VDL+ + +YE L + +D LF
Sbjct: 714 PFQTNNPHPK-DAQTKTNS--SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEF 770
Query: 239 --GLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVS 296
L+A ++D + +VY D E D MLVGD PW F
Sbjct: 771 NGELMAPKKD-------------------------WLIVYTDEENDMMLVGDDPWQEFCC 805
Query: 297 TVKRLRVLKSSELSAFTSG 315
V+++ + E+ G
Sbjct: 806 MVRKIFIYTKEEVRKMNPG 824
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 31/139 (22%)
Query: 180 PHESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFR- 238
P ++ N H K D + N+ K++ G+ +GR VDL+ + +YE L + +D LF
Sbjct: 714 PFQTNNPHPK-DAQTKTNS--SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEF 770
Query: 239 --GLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVS 296
L+A ++D + +VY D E D MLVGD PW F
Sbjct: 771 NGELMAPKKD-------------------------WLIVYTDEENDMMLVGDDPWQEFCC 805
Query: 297 TVKRLRVLKSSELSAFTSG 315
V+++ + E+ G
Sbjct: 806 MVRKIFIYTKEEVRKMNPG 824
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 31/139 (22%)
Query: 180 PHESQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFR- 238
P ++ N H K D + N+ K++ G+ +GR VDL+ + +YE L + +D LF
Sbjct: 714 PFQTNNPHPK-DAQTKTNSSRSC--TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEF 770
Query: 239 --GLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVS 296
L+A ++D + +VY D E D MLVGD PW F
Sbjct: 771 NGELMAPKKD-------------------------WLIVYTDEENDMMLVGDDPWQEFCC 805
Query: 297 TVKRLRVLKSSELSAFTSG 315
V+++ + E+ G
Sbjct: 806 MVRKIFIYTKEEVRKMNPG 824
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 22/127 (17%)
Query: 183 SQNQHDKGDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLA 242
S Q+ KG + + + K+ G +GR +D+ ++ YE L SA++ +F GL
Sbjct: 774 SLRQNSKGSSWQKIATPRVRTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMF-GL-- 829
Query: 243 AQRDASAGGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLR 302
G+ P+ S + LVY D E D +LVGD PW FV V+ +R
Sbjct: 830 -------EGLLTHPQ-----------SSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIR 871
Query: 303 VLKSSEL 309
+L +E+
Sbjct: 872 ILSPTEV 878
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 205 VKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITG 264
K++M G +GR +DL YE L ++ +F I G
Sbjct: 542 TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD-----------------------IKG 578
Query: 265 -LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTSGNK 317
LL+ + ++ +VY D+E D M+VGD PW+ F V+++ + E+ + NK
Sbjct: 579 ELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 632
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 205 VKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITG 264
K++M G +GR +DL YE L ++ +F I G
Sbjct: 545 TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD-----------------------IKG 581
Query: 265 -LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTSGNK 317
LL+ + ++ +VY D+E D M+VGD PW+ F V+++ + E+ + NK
Sbjct: 582 ELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 635
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 205 VKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITG 264
K++M G +GR +DL YE L ++ +F I G
Sbjct: 545 TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD-----------------------IKG 581
Query: 265 -LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTSGNK 317
LL+ + ++ +VY D+E D M+VGD PW+ F V+++ + E+ + NK
Sbjct: 582 ELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 635
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 205 VKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITG 264
K++M G +GR +DL YE L ++ +F I G
Sbjct: 540 TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD-----------------------IKG 576
Query: 265 -LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTSGNK 317
LL+ + ++ +VY D+E D M+VGD PW+ F V+++ + E+ + NK
Sbjct: 577 ELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 630
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 190 GDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASA 249
G G P + K+ G +GR +D+N Y Y+ L + +F
Sbjct: 1026 GGGLWPAQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMF------------ 1072
Query: 250 GGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL 309
G+ + E+ + + ++ LVY D+E D +LVGD PW FV+ V+ +++L S+E+
Sbjct: 1073 -GIEGQLEDPQ--------TSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEV 1123
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 190 GDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASA 249
G G P + K+ G +GR +D+N Y Y+ L + +F
Sbjct: 1026 GGGLWPAQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMF------------ 1072
Query: 250 GGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL 309
G+ + E+ + + ++ LVY D+E D +LVGD PW FV+ V+ +++L S+E+
Sbjct: 1073 -GIEGQLEDPQ--------TSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEV 1123
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 190 GDGKKPVNNYGKGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASA 249
G G P + K+ G +GR +D+N Y Y+ L + +F
Sbjct: 1025 GGGLWPAQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMF------------ 1071
Query: 250 GGVHNKPEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL 309
G+ + E+ + + ++ LVY D+E D +LVGD PW FV+ V+ +++L S+E+
Sbjct: 1072 -GIEGQLEDPQ--------TSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEV 1122
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 23/109 (21%)
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ M GV IGR VDL+ Y+ L ++ LF + G
Sbjct: 514 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF-----------------------DLKGQ 550
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTS 314
L ++ + + +NE D+MLVG+ PW F + VK++ + E+ S
Sbjct: 551 LQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKS 599
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 23/100 (23%)
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ M GV IGR VDL+ Y+ L ++ LF I G
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF-----------------------DIKGQ 551
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 305
L ++ + + D++ D+MLVGD PW F + VK++ + K
Sbjct: 552 LQTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFIQK 591
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 23/104 (22%)
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ M GV IGR VDL+ Y+ L ++ LF I G
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF-----------------------DIKGQ 551
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL 309
L ++ + + D++G MLVGD PW F VK++ + E+
Sbjct: 552 LQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEV 595
>AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33 |
chr5:23270024-23270959 FORWARD LENGTH=171
Length = 171
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 209 MDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLDG 268
++G I +++ L+ +GSY+SL+SA+ +F + + AI G
Sbjct: 79 LEGRSICQRISLDKHGSYQSLASALRQMF---------VDGADSTDDLDLSNAIPG---- 125
Query: 269 SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVL 304
+ + YED E D +L GD+ W FV KR+R+L
Sbjct: 126 ---HLIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 23/100 (23%)
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ M GV IGR VDL+ Y+ L ++ LF + G
Sbjct: 520 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF-----------------------DLKGQ 556
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 305
L ++ +++ ++ D MLVGD PW F + VKR+ + K
Sbjct: 557 LQTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYIQK 596
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 23/100 (23%)
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ M GV I R VDL+ Y+ L ++ LF + G
Sbjct: 513 KVQMQGVTIERAVDLSVLNGYDQLILELEELF-----------------------DLKGQ 549
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 305
L ++ + + D++ D+MLVGD PW F + VK++ + K
Sbjct: 550 LQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIFK 589
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 23/104 (22%)
Query: 206 KINMDGVPIGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGL 265
K+ M GV IGR VDL+ Y+ L ++ LF + G
Sbjct: 499 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF-----------------------DLKGQ 535
Query: 266 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL 309
L ++ + + D++G MLVGD PW F VK++ + E+
Sbjct: 536 LQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEV 579
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor 19
| chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 21/96 (21%)
Query: 214 IGRKVDLNAYGSYESLSSAVDALFRGLLAAQRDASAGGVHNKPEEEKAITGLLDGSGEYT 273
+GR +D+ Y Y+ L + +F G+ + E+ + ++
Sbjct: 969 VGRSIDVTRYSGYDELRHDLARMF-------------GIEGQLEDPL--------TSDWK 1007
Query: 274 LVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEL 309
LVY D+E D +LVGD PW FV+ V+ +++L S E+
Sbjct: 1008 LVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEV 1043
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 26/119 (21%)
Query: 201 KGMFVKINMDGVPIGRKVDLNAYGSYESLSSAVDALF--RGLLAAQRDASAGGVHNKPEE 258
K + K++ G +GR +DL+ Y+ L ++ LF GLL RD G
Sbjct: 664 KRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLL---RDPEKG-------- 712
Query: 259 EKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTSGNK 317
+ ++Y D+E D M+VGD PWH F + V ++ + E+ NK
Sbjct: 713 -------------WRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 758