Miyakogusa Predicted Gene
- Lj3g3v0290120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0290120.1 Non Chatacterized Hit- tr|F6HY95|F6HY95_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.22,0.0000000003,AUX_IAA,AUX/IAA protein;
IAA_ARF,Aux/IAA-ARF-dimerisation; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAME,CUFF.40435.1
(972 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65615 similar to UniRef100_A7P726 Cluster: Chromosome... 1025 0.0
gnl|LJGI|TC60857 similar to UniRef100_A7P726 Cluster: Chromosome... 983 0.0
gnl|LJGI|GO024202 similar to UniRef100_A7P726 Cluster: Chromosom... 726 0.0
gnl|LJGI|TC76899 similar to UniRef100_A7P726 Cluster: Chromosome... 155 6e-37
gnl|LJGI|BW621476 similar to UniRef100_A7P4C2 Cluster: Chromosom... 56 4e-07
>gnl|LJGI|TC65615 similar to UniRef100_A7P726 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 904
Score = 1025 bits (517), Expect = 0.0
Identities = 523/525 (99%)
Strand = Plus / Plus
Query: 448 agaactgcccctggtccagtagtgggttggcctccaattcgttcattcaggaagaatctt 507
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 23 agaactgcccctggtccagtagtgggttggcctccaattcattcattcgggaagaatctt 82
Query: 508 gctagtagcagcacttcttctaagcctcctcctcatgagtcccagaaccagcatgataaa 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gctagtagcagcacttcttctaagcctcctcctcatgagtcccagaaccagcatgataaa 142
Query: 568 ggtgatggtaaaaaacctgttaacaactatggtaaaggcatgtttgtgaagatcaacatg 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ggtgatggtaaaaaacctgttaacaactatggtaaaggcatgtttgtgaagatcaacatg 202
Query: 628 gatggtgttccaattgggagaaaagtggacctcaatgcctatggcagctatgaaagtctc 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gatggtgttccaattgggagaaaagtggacctcaatgcctatggcagctatgaaagtctc 262
Query: 688 tcctctgccgtggatgcgctctttagaggtctccttgcagctcaacgagatgcctctgct 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcctctgccgtggatgcgctctttagaggtctccttgcagctcaacgagatgcctctgct 322
Query: 748 ggtggagttcacaacaagccagaggaagagaaagcaattacaggtttattggatggtagt 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggtggagttcacaacaagccagaggaagagaaagcaattacaggtttattggatggtagt 382
Query: 808 ggagagtatactctagtttatgaagataacgaaggagacaggatgcttgttggtgatgta 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggagagtatactctagtttatgaagataacgaaggagacaggatgcttgttggtgatgta 442
Query: 868 ccgtggcacatgtttgtatcaacagtgaagaggctgcgagttttgaagagttctgagctt 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccgtggcacatgtttgtatcaacagtgaagaggctgcgagttttgaagagttctgagctt 502
Query: 928 tctgcctttacctctggcaataagcaacaccacaccacttgactc 972
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tctgcctttacctctggcaataagcaacaccacaccacttgactc 547
>gnl|LJGI|TC60857 similar to UniRef100_A7P726 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 808
Score = 983 bits (496), Expect = 0.0
Identities = 496/496 (100%)
Strand = Plus / Plus
Query: 1 atggatgaaaggtcaaggaatgaggtttctcctcagctgctggatttgattccaaatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atggatgaaaggtcaaggaatgaggtttctcctcagctgctggatttgattccaaatgag 372
Query: 61 agagagtggcacatgaaaaaaggtgaaggaggaaagtcctcagaggagaggaagctggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agagagtggcacatgaaaaaaggtgaaggaggaaagtcctcagaggagaggaagctggag 432
Query: 121 ctgaggcttggtccacctggtgttgaggactggtccctcaatgacaaaatgaaaaacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctgaggcttggtccacctggtgttgaggactggtccctcaatgacaaaatgaaaaacact 492
Query: 181 caaacagatcatgagtctctactctctcttggttactactatcccatgatgcctcattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 caaacagatcatgagtctctactctctcttggttactactatcccatgatgcctcattca 552
Query: 241 gcaaaactaagctccaacaatggtttccatagctaccaacaccaccaccagggtagtaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gcaaaactaagctccaacaatggtttccatagctaccaacaccaccaccagggtagtaaa 612
Query: 301 gctacttcatttcttcatcatacatcatcacaaacctgtggccctaaggtggtagagttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gctacttcatttcttcatcatacatcatcacaaacctgtggccctaaggtggtagagttg 672
Query: 361 cagcagaacaagggtagtgataataacaacaaagtgttctcttctccctcttctgcaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cagcagaacaagggtagtgataataacaacaaagtgttctcttctccctcttctgcaaac 732
Query: 421 acagctgtacccaacagctctcagaaaagaactgcccctggtccagtagtgggttggcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 acagctgtacccaacagctctcagaaaagaactgcccctggtccagtagtgggttggcct 792
Query: 481 ccaattcgttcattca 496
||||||||||||||||
Sbjct: 793 ccaattcgttcattca 808
>gnl|LJGI|GO024202 similar to UniRef100_A7P726 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 738
Score = 726 bits (366), Expect = 0.0
Identities = 379/382 (99%), Gaps = 1/382 (0%)
Strand = Plus / Plus
Query: 1 atggatgaaaggtcaaggaatgaggtttctcctcagctgctggatttgattccaaatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atggatgaaaggtcaaggaatgaggtttctcctcagctgctggatttgattccaaatgag 416
Query: 61 agagagtggcacatgaaaaaaggtgaaggaggaaagtcctcagaggagaggaagctggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agagagtggcacatgaaaaaaggtgaaggaggaaagtcctcagaggagaggaagctggag 476
Query: 121 ctgaggcttggtccacctggtgttgaggactggtccctcaatgacaaaatgaaaaacact 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 477 ctgaggcttggtccacctggtgttgaggactggtccctcaatgacaaaataaaaaacact 536
Query: 181 caaacagatcatgagtctctactctctcttggttactactatcccatgatgcctcattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 caaacagatcatgagtctctactctctcttggttactactatcccatgatgcctcattca 596
Query: 241 gcaaaactaagctccaacaatggtttccatagctaccaacaccaccaccagggtagtaaa 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 597 gcaaaactaagctccaacaatggtttccatagccaccaacaccaccaccagggtagtaaa 656
Query: 301 gctacttcatttcttcatcatacatcatcacaaacctgtggccctaaggtggtagagttg 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 657 gctacttcatttcttcatcatacatcatcacaaacctgtggccctaa-gtggtagagttg 715
Query: 361 cagcagaacaagggtagtgata 382
||||||||||||||||||||||
Sbjct: 716 cagcagaacaagggtagtgata 737
>gnl|LJGI|TC76899 similar to UniRef100_A7P726 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 1207
Score = 155 bits (78), Expect = 6e-37
Identities = 261/322 (81%), Gaps = 15/322 (4%)
Strand = Plus / Plus
Query: 608 tgtttgtgaagatcaacatggatggtgttccaattgggagaaaagtggacctcaatgcct 667
|||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||| |
Sbjct: 630 tgtttgtgaagatcaatatggatggagttcccattgggagaaaagtggacatcaatgctt 689
Query: 668 atggcagctatgaaagtctctcctctgccgtggatgcgctctttagaggtctccttgcag 727
|| ||||||||||| || |||| ||| || |||| ||| |||||||| || ||||| |
Sbjct: 690 ataacagctatgaaaaactttcctatgctgttgatgagctatttagaggcctgcttgctg 749
Query: 728 ctcaacgagatgcctctgctggtggagttcacaacaagc--caga----ggaagagaaag 781
|| |||| ||||||||| |||||||||||| |||| |||||||||||
Sbjct: 750 ---------attcctcagctggtggaattcacaacaagctgcagaaagtggaagagaaag 800
Query: 782 caattacaggtttattggatggtagtggagagtatactctagtttatgaagataacgaag 841
|| | |||| ||| ||| ||||| || |||||||| || ||||| ||||| ||||
Sbjct: 801 gcataatgggttctttgattggaagtggggaatatactcttgtgtatgaggataatgaag 860
Query: 842 gagacaggatgcttgttggtgatgtaccgtggcacatgtttgtatcaacagtgaagaggc 901
||||||||||||||||| ||||| || |||||||| || |||||||||||||||||||
Sbjct: 861 gagacaggatgcttgttcaggatgtgccatggcacatattcgtatcaacagtgaagaggc 920
Query: 902 tgcgagttttgaagagttctga 923
|||| || ||||||||||||||
Sbjct: 921 tgcgggtgttgaagagttctga 942
Score = 97.6 bits (49), Expect = 1e-19
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 409 tcttctgcaaacacagctgtacccaacagctctcagaaaagaactgcccctggtccagta 468
||||||||||| ||||| || | ||| || || |||||||||||||| ||||| |||||
Sbjct: 422 tcttctgcaaatacagcagtgctcaataggtcccagaaaagaactgcttctggttcagta 481
Query: 469 gtgggttggcctccaattcgttcattcaggaagaatcttgc 509
||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 482 gtgggttggcctccaattcgttcgtgcaggaagaaccttgc 522
Score = 61.9 bits (31), Expect = 7e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 100 tcagaggagaggaagctggagctgaggcttggtccacctggtg 142
|||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 146 tcagaggagaggaaactggagcttagacttggtccacctggtg 188
>gnl|LJGI|BW621476 similar to UniRef100_A7P4C2 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 490
Score = 56.0 bits (28), Expect = 4e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 100 tcagaggagaggaagctggagctgaggcttggtccacctg 139
|||||||||||||| |||||||| || |||||||||||||
Sbjct: 165 tcagaggagaggaaactggagcttagacttggtccacctg 204