Miyakogusa Predicted Gene
- Lj2g3v3413430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3413430.1 Non Chatacterized Hit- tr|I1JJW7|I1JJW7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54437
PE,90.08,0,seg,NULL; Sec7,SEC7-like; DUF1981,Domain of unknown
function DUF1981, SEC7 associated; no descriptio,CUFF.40416.1
(3438 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023982 weakly similar to UniRef100_A7P8T5 Cluster: Ch... 1338 0.0
gnl|LJGI|FS357430 similar to UniRef100_A7P8T5 Cluster: Chromosom... 961 0.0
gnl|LJGI|BP052733 similar to UniRef100_Q9SZM0 Cluster: Guanine n... 618 e-176
gnl|LJGI|GO022236 homologue to UniRef100_A9RTG1 Cluster: Predict... 115 2e-24
gnl|LJGI|GO036068 90 1e-16
gnl|LJGI|TC67636 64 6e-09
gnl|LJGI|BP057284 similar to UniRef100_A7P8T5 Cluster: Chromosom... 62 2e-08
gnl|LJGI|BP064236 homologue to UniRef100_A7PYA2 Cluster: Chromos... 60 1e-07
>gnl|LJGI|GO023982 weakly similar to UniRef100_A7P8T5 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 689
Score = 1338 bits (675), Expect = 0.0
Identities = 689/691 (99%), Gaps = 2/691 (0%)
Strand = Plus / Plus
Query: 2236 ctattctcatgcaatttttggaataacattttctgttctgttatattccctatatataac 2295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctattctcatgcaatttttggaataacattttctgttctgttatattccctatatataac 60
Query: 2296 tcagtatctggaaagaatgatatgaatctcctagtggatcatagttcaccatcttcagta 2355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagtatctggaaagaatgatatgaatctcctagtggatcatagttcaccatcttcagta 120
Query: 2356 tctgcacattctgaaggaagcacatgggattctgagacttcttcagtagcagcagaatgt 2415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctgcacattctgaaggaagcacatgggattctgagacttcttcagtagcagcagaatgt 180
Query: 2416 ttaatagatttatttgtcaccttctttgggatggtgaggtctcagctaccaggtgtggtg 2475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaatagatttatttgtcaccttctttgggatggtgaggtctcagctaccaggtgtggtg 240
Query: 2476 tcagtattgacagggttcattaggagtcctgtacagggtccagctagtactggagtttct 2535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcagtattgacagggttcattaggagtcctgtacagggtccagctagtactggagtttct 300
Query: 2536 gaattagtgcgtctcactggtgaccttggtaacaagctttcagaagaagaatggaaaagt 2595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaattagtgcgtctcactggtgaccttggtaacaagctttcagaagaagaatggaaaagt 360
Query: 2596 atttttctatgtttgaaagatgcagctacatcaactgtgccaggatacatgaaggtcttg 2655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atttttctatgtttgaaagatgcagctacatcaactgtgccaggatacatgaaggtcttg 420
Query: 2656 aaaaccatgaataatcttgaggtgcccaaaatttcagagtcttctacttacctggaaaga 2715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaaccatgaataatcttgaggtgcccaaaatttcagagtcttctacttacctggaaaga 480
Query: 2716 tcttctgatcatgacttgacaaatgatgagtttgatgatgacaatctgcaaatggccaca 2775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcttctgatcatgacttgacaaatgatgagtttgatgatgacaatctgcaaatggccaca 540
Query: 2776 tacgtcgtgtcaagaaccaagaaccatattgctatgcagctacttattttacaggttgca 2835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tacgtcgtgtcaagaaccaagaaccatattgctatgcagctacttattttacaggttgca 600
Query: 2836 actgatatgtacaaaaggcaccagcaatccatatcagcagccaacatcaaactccttatt 2895
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actgatatgtacaaaa-gcaccagcaatccatatcagcagccaacatcaaactccttatt 659
Query: 2896 gaattatattcatctattgctttccatgctc 2926
| |||||||||||||||||||||||||||||
Sbjct: 660 g-attatattcatctattgctttccatgctc 689
>gnl|LJGI|FS357430 similar to UniRef100_A7P8T5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (8%)
Length = 683
Score = 961 bits (485), Expect = 0.0
Identities = 485/485 (100%)
Strand = Plus / Minus
Query: 2954 tgaagaagttgcagaaagcgtgctccatcctagaactatctgccccgcctgtggttcatt 3013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tgaagaagttgcagaaagcgtgctccatcctagaactatctgccccgcctgtggttcatt 624
Query: 3014 ttgaaaatgagtccttccagaatcacctcaactttctacaaaatttgcatgtccaacatg 3073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttgaaaatgagtccttccagaatcacctcaactttctacaaaatttgcatgtccaacatg 564
Query: 3074 ttgtgcatgatgaaatagacctagaacaagagttagtagcagtatgtgaaaatgtgttgg 3133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttgtgcatgatgaaatagacctagaacaagagttagtagcagtatgtgaaaatgtgttgg 504
Query: 3134 acatatacctaaattgtgctggtccggtatccgcatttcacaagtcagataccctgccag 3193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acatatacctaaattgtgctggtccggtatccgcatttcacaagtcagataccctgccag 444
Query: 3194 tgccacgtcgaaagctccctttgagctcagcaaagaaagaggaaatagctgctaggacat 3253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgccacgtcgaaagctccctttgagctcagcaaagaaagaggaaatagctgctaggacat 384
Query: 3254 ctctagtcatctcagcattgcaagggttggctggtctggaaaaggattcattcaggaggt 3313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctctagtcatctcagcattgcaagggttggctggtctggaaaaggattcattcaggaggt 324
Query: 3314 atattcctcggttctttcacttattggtagatcttgtgaggagcgaacacacctctggag 3373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atattcctcggttctttcacttattggtagatcttgtgaggagcgaacacacctctggag 264
Query: 3374 aagttcagcttgtcctcagtaatatgtttcgttcatctgtaggcccaattataatggaat 3433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aagttcagcttgtcctcagtaatatgtttcgttcatctgtaggcccaattataatggaat 204
Query: 3434 gagtt 3438
|||||
Sbjct: 203 gagtt 199
>gnl|LJGI|BP052733 similar to UniRef100_Q9SZM0 Cluster: Guanine nucleotide-exchange
protein-like"; n=2; Arabidopsis thaliana|Rep: Guanine
nucleotide-exchange protein-like" - Arabidopsis thaliana
(Mouse-ear cress), partial (4%)
Length = 507
Score = 618 bits (312), Expect = e-176
Identities = 318/321 (99%)
Strand = Plus / Minus
Query: 1827 attattagcttttgagacgatggagaaaatagtgcgtgaatttttcccttatattactga 1886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 attattagcttttgagacgatggagaaaatagtgcgtgaatttttcccttatattactga 448
Query: 1887 aacagaaacaacgaccttcaccgattgtgttcaatgccttttgacatttacaaatagccg 1946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aacagaaacaacgaccttcaccgattgtgttcaatgccttttgacatttacaaatagccg 388
Query: 1947 attcaatagtgatgttagcctcaatgcaatcgcatttcttcgtttctgtgcggttagact 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 attcaatagtgatgttagcctcaatgcaatcgcatttcttcgtttctgtgcggttagact 328
Query: 2007 tgctgatggaggacttgtttgcaataagaagagcaatgttgatggctcatcagttgtagt 2066
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgctgatggaggacttgtttgcnataagaagagcaatgttgatggctcatcagttgtagt 268
Query: 2067 aaatggtgtttcagatgtgcaagctcttactgacaatgacaatgatgatcatgtttcctt 2126
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 267 aaatggtgtttcagatgtgcaagctcttactgacnatgacnatgatgatcatgtttcctt 208
Query: 2127 ttggaatcctttactatcagg 2147
|||||||||||||||||||||
Sbjct: 207 ttggaatcctttactatcagg 187
>gnl|LJGI|GO022236 homologue to UniRef100_A9RTG1 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein -, partial (2%)
Length = 626
Score = 115 bits (58), Expect = 2e-24
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 23 ctttggctcataaacacattgctgcaactaatttaaatttcaatcagtctttgacatttc 82
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 622 ctttggctcataaacacattgctgcaactaatttaaatttcaattagtctttgacatttc 563
Query: 83 ct 84
||
Sbjct: 562 ct 561
>gnl|LJGI|GO036068
Length = 734
Score = 89.7 bits (45), Expect = 1e-16
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 1 atgtcccaagtgcttctgcatcctttggctcataaacacattgct 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgtcccaagtgcttctgcatcctttggctcataaacacattgct 557
>gnl|LJGI|TC67636
Length = 732
Score = 63.9 bits (32), Expect = 6e-09
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 2 tgtcccaagtgcttctgcatcctttggctcataaacacattgctgcaactaa 53
|||| |||||||||||||| ||||||||||||||||||||| |||| ||||
Sbjct: 299 tgtctcaagtgcttctgcaatctttggctcataaacacattgttgcagctaa 248
>gnl|LJGI|BP057284 similar to UniRef100_A7P8T5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 538
Score = 61.9 bits (31), Expect = 2e-08
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 143 tgaaagttatgcatgcatatgtagattcttt 173
|||||||||||||||||||||||||||||||
Sbjct: 508 tgaaagttatgcatgcatatgtagattcttt 538
>gnl|LJGI|BP064236 homologue to UniRef100_A7PYA2 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 565
Score = 60.0 bits (30), Expect = 1e-07
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1459 attgcgcattataatatgaaccgtatcagattagtatggtcacgaatgtggaatgttctc 1518
|||||||| || ||||||||||| ||||| | ||||||||| | || ||| ||||||||
Sbjct: 393 attgcgcactacaatatgaaccgcatcaggcttgtatggtcaagcatctggcatgttctc 334
Query: 1519 tcagatttctttgt 1532
|| |||||||||||
Sbjct: 333 tctgatttctttgt 320