Miyakogusa Predicted Gene

Lj2g3v3340800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3340800.1 Non Chatacterized Hit- tr|I1LXL6|I1LXL6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25280
PE,62.04,2e-17,seg,NULL; VQ,VQ,CUFF.40119.1
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g10840.1                                                        68   8e-12
Glyma20g15230.1                                                        65   7e-11

>Glyma13g10840.1 
          Length = 224

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 56/123 (45%), Gaps = 6/123 (4%)

Query: 1   MIQTMSNPNDWLQFYHQNLPNQT--LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLGP 58
           M QTMS PNDWLQFY+QNL                                     +L P
Sbjct: 1   MTQTMSGPNDWLQFYNQNLTPSIPDFTVTTAAATTAIVAATSPPQDMPNLSPSGSTHLSP 60

Query: 59  DGRVSKPTXXXXXXXXXNPXXXXXXXXXXFRAMVQQFTGGPAAPFAPSST----GLPNLM 114
           +GRV+KPT          P          FRAMVQQFTGGP+APFA + +     LPNLM
Sbjct: 61  EGRVAKPTRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFASNPSLAPQVLPNLM 120

Query: 115 GFG 117
           GFG
Sbjct: 121 GFG 123


>Glyma20g15230.1 
          Length = 233

 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 60/126 (47%), Gaps = 10/126 (7%)

Query: 1   MIQTMSNPND-WLQFYHQN----LPNQTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 55
           M QTMS PND WLQFY+QN    +P+ T+                              +
Sbjct: 1   MTQTMSGPNDSWLQFYNQNSTPSIPDFTVSTANVTTTTIVAATSPSQDMLNSSSSGPT-H 59

Query: 56  LGPDGRVSKPTXXXXXXXXXNPXXXXXXXXXXFRAMVQQFTGGPAAPFAPSST----GLP 111
           L P+GRV+KPT          P          FRAMVQQFTGGP+AP+A + +     LP
Sbjct: 60  LSPEGRVAKPTRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPYASNPSLAPHVLP 119

Query: 112 NLMGFG 117
           NLMGFG
Sbjct: 120 NLMGFG 125