Miyakogusa Predicted Gene

Lj2g3v3335060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3335060.1 tr|G7K4U8|G7K4U8_MEDTR Cytochrome c oxidase
assembly protein COX15-like protein OS=Medicago
truncatu,77.07,0,CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15,NULL;
seg,NULL; COX15-CtaA,Heme A synthase,CUFF.40021.1
         (221 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g47340.1                                                       269   2e-72
Glyma14g01420.1                                                       258   3e-69
Glyma01g03250.1                                                       135   4e-32
Glyma03g22690.1                                                       122   2e-28

>Glyma02g47340.1 
          Length = 455

 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 137/204 (67%), Positives = 159/204 (77%), Gaps = 8/204 (3%)

Query: 1   MFGRGTAFSILKRSREAA--IHKLRATTTRPFSHPSAQQSFKFLSPSIASHGFRAFRSLP 58
           MFGRGT +S+L+R +EA    HKLR T   PFS+ S+   FKFLSP +++H F AFRS  
Sbjct: 1   MFGRGTVWSVLRRGKEACGGFHKLRGT---PFSYSSSSTPFKFLSPPVSTHCFHAFRSQL 57

Query: 59  IPKGHHVSF--TRSFSKVVSAGAEHKEGLKLLVAGGAHAQKVVGVWLFGSAAWVFSMVXX 116
           IPKGHHV     R+FSK+VSA  + +EGLKLLV+GG+ AQK+VG+WLFGSAAWVFSMV  
Sbjct: 58  IPKGHHVHVPQMRNFSKMVSA-EQKEEGLKLLVSGGSRAQKLVGIWLFGSAAWVFSMVVL 116

Query: 117 XXXXXXXXXXXXMTDWKFTGGLPPLSDEEWLKEFEKYKQSPEYKRVNKGMTIEEFKFIYW 176
                       MTDWKFTG LPP SDEEWL+EF+KYKQSPE+KRVN+GM IEEFKFIYW
Sbjct: 117 GGLTRLTRSGLSMTDWKFTGTLPPFSDEEWLQEFDKYKQSPEFKRVNRGMKIEEFKFIYW 176

Query: 177 MEYAHRMWGRALGVIFALPYSYFL 200
           MEYAHRMWGRALGV+FALPYSYFL
Sbjct: 177 MEYAHRMWGRALGVMFALPYSYFL 200


>Glyma14g01420.1 
          Length = 456

 Score =  258 bits (660), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 137/204 (67%), Positives = 154/204 (75%), Gaps = 7/204 (3%)

Query: 1   MFGRGTAFSILKRSREAA-IHKLRATTTRPFSHPSAQQS-FKFLSPSIASHGFRAFRSLP 58
           MFGRG  +S+ KR +EA  IHKL    T PFS  S Q   FKFL+P +A+H   AFRS  
Sbjct: 1   MFGRGMVWSVWKRGKEACKIHKLCLRGT-PFSSSSTQPPPFKFLTPPVATHYIHAFRSQL 59

Query: 59  IPKGHHVSF--TRSFSKVVSAGAEHKEGLKLLVAGGAHAQKVVGVWLFGSAAWVFSMVXX 116
            PKGHHV     R+FSK+VSA  E KEGLKLLV+GG+ AQK+VG+WLFGSAAWVFSMV  
Sbjct: 60  FPKGHHVHVPQMRNFSKMVSA--EQKEGLKLLVSGGSRAQKLVGIWLFGSAAWVFSMVVL 117

Query: 117 XXXXXXXXXXXXMTDWKFTGGLPPLSDEEWLKEFEKYKQSPEYKRVNKGMTIEEFKFIYW 176
                       MTDWKFTG LPP SD+EWL+EF+KYKQSPEYKRVN+GM IEEFKFIYW
Sbjct: 118 GGLTRLTRSGLSMTDWKFTGTLPPFSDDEWLQEFDKYKQSPEYKRVNRGMKIEEFKFIYW 177

Query: 177 MEYAHRMWGRALGVIFALPYSYFL 200
           MEYAHRMWGRALGV+FALPYSYFL
Sbjct: 178 MEYAHRMWGRALGVMFALPYSYFL 201


>Glyma01g03250.1 
          Length = 266

 Score =  135 bits (340), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 77/137 (56%), Positives = 88/137 (64%), Gaps = 19/137 (13%)

Query: 82  KEGLKLLVAGGAHAQKVVGVWLFGSAAWVFSMVXXXXXXXXXXXXXXMTDWKFTGGLPPL 141
           K+GLKLL+  G  A+K+VG W FG AAWVFSMV              +TDWKF   L P 
Sbjct: 1   KKGLKLLM-NGVRAKKLVGKWSFGLAAWVFSMVVLG-----------VTDWKFINTLYPF 48

Query: 142 SDEEWLKEFEKYKQSPEYKRVNKGMTIEEFKFIYWMEYAHRMWGRALGVIFALPYSYFLL 201
           SDEE L+EF+KYKQSPE KRVNKGM IEEFKFIYWMEYAHRM GRALG        Y  L
Sbjct: 49  SDEECLQEFDKYKQSPENKRVNKGMKIEEFKFIYWMEYAHRMGGRALG-------GYISL 101

Query: 202 LCLPWVLGRVSLAGGWS 218
             +  +    +LAG W+
Sbjct: 102 TLVLRLFAMFALAGCWA 118


>Glyma03g22690.1 
          Length = 107

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 63/72 (87%)

Query: 129 MTDWKFTGGLPPLSDEEWLKEFEKYKQSPEYKRVNKGMTIEEFKFIYWMEYAHRMWGRAL 188
           MT WKF   LP LS+EEWL++F+K KQSPEY RVNKGM IEEFKFIYWM+YAH MWGRAL
Sbjct: 1   MTIWKFIDTLPLLSNEEWLQKFDKNKQSPEYTRVNKGMKIEEFKFIYWMKYAHCMWGRAL 60

Query: 189 GVIFALPYSYFL 200
           GV+F+LPYSYFL
Sbjct: 61  GVMFSLPYSYFL 72