Miyakogusa Predicted Gene

Lj2g3v3138170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3138170.1 tr|G7K3G7|G7K3G7_MEDTR DNA polymerase OS=Medicago
truncatula GN=MTR_5g092100 PE=3 SV=1,94.02,0,DNA/RNA polymerases,NULL;
DNA polymerase A domain,DNA-directed DNA polymerase, family A, palm
domain,CUFF.39787.1
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45910.1                                                       366   e-102
Glyma14g02860.1                                                       365   e-101
Glyma02g25220.1                                                       211   3e-55
Glyma19g04810.1                                                       147   1e-35
Glyma13g17310.1                                                       147   1e-35
Glyma14g20430.1                                                        50   2e-06

>Glyma02g45910.1 
          Length = 1077

 Score =  366 bits (940), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 173/184 (94%), Positives = 179/184 (97%)

Query: 1    MLDAFKAGGDFHSRTAMNMYPYIREAVEKKHVLLEWHPQPGEDKPPVPLLKDAFGSERRK 60
            ML+AF+AGGDFHSRTAMNMYP+IREAVEKK VLLEWHPQPGEDKPPVPLLKDAF SERRK
Sbjct: 842  MLEAFEAGGDFHSRTAMNMYPHIREAVEKKEVLLEWHPQPGEDKPPVPLLKDAFASERRK 901

Query: 61   AKMLNFSIAYGKTPVGLSRDWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEAREFHCVH 120
            AKMLNFSIAYGKTPVGLS+DWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEAR  HCV+
Sbjct: 902  AKMLNFSIAYGKTPVGLSKDWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEARVLHCVY 961

Query: 121  TLLGRARRFPLMAQANTYQQGHIERAAINTPVQGSAADVAMCAMLQISNNKRLKELGWKL 180
            TLLGRARRFPLMAQANTYQ+GHIERAAINTPVQGSAADVAMCAMLQIS NKRLKELGWKL
Sbjct: 962  TLLGRARRFPLMAQANTYQKGHIERAAINTPVQGSAADVAMCAMLQISKNKRLKELGWKL 1021

Query: 181  LLQV 184
            LLQV
Sbjct: 1022 LLQV 1025


>Glyma14g02860.1 
          Length = 917

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 173/184 (94%), Positives = 179/184 (97%)

Query: 1   MLDAFKAGGDFHSRTAMNMYPYIREAVEKKHVLLEWHPQPGEDKPPVPLLKDAFGSERRK 60
           ML+AF+AGGDFHSRTAMNMYP+IREAVEKK VLLEWHPQPGEDKPPVPLLKDAF SERRK
Sbjct: 682 MLEAFEAGGDFHSRTAMNMYPHIREAVEKKEVLLEWHPQPGEDKPPVPLLKDAFASERRK 741

Query: 61  AKMLNFSIAYGKTPVGLSRDWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEAREFHCVH 120
           AKMLNFSIAYGKTPVGLS+DWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEAR  HCV+
Sbjct: 742 AKMLNFSIAYGKTPVGLSKDWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEARVLHCVY 801

Query: 121 TLLGRARRFPLMAQANTYQQGHIERAAINTPVQGSAADVAMCAMLQISNNKRLKELGWKL 180
           TLLGRARRFPLMAQANTYQ+GHIERAAINTPVQGSAADVAMCAMLQIS NKRLKELGWKL
Sbjct: 802 TLLGRARRFPLMAQANTYQKGHIERAAINTPVQGSAADVAMCAMLQISKNKRLKELGWKL 861

Query: 181 LLQV 184
           LLQV
Sbjct: 862 LLQV 865


>Glyma02g25220.1 
          Length = 174

 Score =  211 bits (538), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 101/122 (82%), Positives = 111/122 (90%)

Query: 63  MLNFSIAYGKTPVGLSRDWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEAREFHCVHTL 122
           MLNFSIAYGKTPVGLS+DWKV+V EA++TVDLWYNDRKEVL+WQ+ERKKEA E   VHTL
Sbjct: 1   MLNFSIAYGKTPVGLSKDWKVTVTEARRTVDLWYNDRKEVLKWQKERKKEACESQRVHTL 60

Query: 123 LGRARRFPLMAQANTYQQGHIERAAINTPVQGSAADVAMCAMLQISNNKRLKELGWKLLL 182
           LGRARRFP +  AN Y +GHIERAAINTPVQGSAADVAMCAML+ISNN +LKELGWKLLL
Sbjct: 61  LGRARRFPKIDLANNYHKGHIERAAINTPVQGSAADVAMCAMLEISNNMKLKELGWKLLL 120

Query: 183 QV 184
           QV
Sbjct: 121 QV 122


>Glyma19g04810.1 
          Length = 598

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 71/74 (95%)

Query: 1   MLDAFKAGGDFHSRTAMNMYPYIREAVEKKHVLLEWHPQPGEDKPPVPLLKDAFGSERRK 60
           ML+AF+AGGDFHSRTAMNMYP+IREA+EKK VLLEWHPQPGEDKPPVPLLKDAF SERRK
Sbjct: 525 MLEAFEAGGDFHSRTAMNMYPHIREALEKKEVLLEWHPQPGEDKPPVPLLKDAFASERRK 584

Query: 61  AKMLNFSIAYGKTP 74
           AKMLNFSIAY KTP
Sbjct: 585 AKMLNFSIAYEKTP 598


>Glyma13g17310.1 
          Length = 175

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/78 (87%), Positives = 73/78 (93%)

Query: 1   MLDAFKAGGDFHSRTAMNMYPYIREAVEKKHVLLEWHPQPGEDKPPVPLLKDAFGSERRK 60
           ML+AF+AGGDFHSRTAMNMYP+IREA+EKK VLLEWHPQPGEDKPPVPLLKDAF SERRK
Sbjct: 74  MLEAFEAGGDFHSRTAMNMYPHIREALEKKEVLLEWHPQPGEDKPPVPLLKDAFASERRK 133

Query: 61  AKMLNFSIAYGKTPVGLS 78
           AKMLNFSIAY KTP  +S
Sbjct: 134 AKMLNFSIAYEKTPHIMS 151


>Glyma14g20430.1 
          Length = 1824

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 51/111 (45%)

Query: 57   ERRKAKMLNFSIAYGKTPVGLSRDWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEAREF 116
            ER + K + + I YG     L+     +  EA + +  + +    V  W  E     R  
Sbjct: 1653 EREQTKRMVYGILYGMGVNSLAEQLDCTSDEAAEKIANFKSSFPGVSSWLLEAVASCRSK 1712

Query: 117  HCVHTLLGRARRFPLMAQANTYQQGHIERAAINTPVQGSAADVAMCAMLQI 167
              V TL GR R    +   ++ ++   +R A+N+  QGSAAD+   AML+I
Sbjct: 1713 GYVETLKGRKRFLSKIKYGSSTEKSKAQRQAVNSICQGSAADIIKIAMLRI 1763