Miyakogusa Predicted Gene
- Lj2g3v3109790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3109790.1 CUFF.39744.1
(361 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043003 similar to UniRef100_A6MB89 Cluster: Nigrosin-... 76 2e-13
gnl|LJGI|TC70105 similar to UniRef100_A3NL91 Cluster: Hemaggluti... 72 3e-12
gnl|LJGI|TC69995 similar to UniRef100_Q2HBE7 Cluster: ATP-depend... 72 3e-12
gnl|LJGI|DC595452 similar to UniRef100_Q54L02 Cluster: LIM domai... 70 1e-11
gnl|LJGI|TC59791 70 1e-11
gnl|LJGI|GO034205 similar to UniRef100_Q7UYB6 Cluster: Probable ... 68 4e-11
gnl|LJGI|AV416076 68 4e-11
gnl|LJGI|AV769328 weakly similar to UniRef100_A8JFD4 Cluster: Gl... 66 2e-10
gnl|LJGI|TC70550 66 2e-10
gnl|LJGI|GO022351 similar to UniRef100_Q63934 Cluster: POU domai... 64 6e-10
gnl|LJGI|BW598656 similar to UniRef100_Q0DI92 Cluster: Os05g0406... 62 2e-09
gnl|LJGI|BP050007 60 1e-08
gnl|LJGI|TC76833 homologue to UniRef100_A5DSL6 Cluster: Predicte... 60 1e-08
gnl|LJGI|TC66517 60 1e-08
gnl|LJGI|TC81013 58 4e-08
gnl|LJGI|TC77093 similar to UniRef100_Q6NTE5 Cluster: Zgc:77291;... 56 2e-07
gnl|LJGI|TC75551 56 2e-07
gnl|LJGI|TC74186 similar to UniRef100_Q91D04 Cluster: ORF1; n=8;... 56 2e-07
gnl|LJGI|TC69209 weakly similar to UniRef100_Q7TPA7 Cluster: Ab1... 54 6e-07
gnl|LJGI|TC65754 similar to UniRef100_Q63934 Cluster: POU domain... 54 6e-07
gnl|LJGI|TC77885 52 2e-06
gnl|LJGI|TC66368 similar to UniRef100_UPI0000EB20E2 Cluster: Coi... 50 9e-06
>gnl|LJGI|BP043003 similar to UniRef100_A6MB89 Cluster: Nigrosin-OG20 antimicrobial
peptide; n=1; Odorrana grahami|Rep: Nigrosin-OG20
antimicrobial peptide - Rana grahami (Yunnanfu frog)
(Huia grahami), partial (23%)
Length = 493
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 114 cgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcatcatctgcaa 173
||||||||||| ||||||||| |||||||||| ||| | |||||||||| | || ||||
Sbjct: 466 cgaaccactcaccatttggagaaaccaacaccgccactgcactcccctcaccgtccgcaa 407
Query: 174 caaaacccctcaacaaat 191
||||||||||||| ||||
Sbjct: 406 caaaacccctcaagaaat 389
>gnl|LJGI|TC70105 similar to UniRef100_A3NL91 Cluster: Hemagglutinin domain protein;
n=1; Burkholderia pseudomallei 668|Rep: Hemagglutinin
domain protein - Burkholderia pseudomallei (strain 668),
partial (7%)
Length = 760
Score = 71.9 bits (36), Expect = 3e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 129 ttggaggaaccaacaccaccatcgtactcccctcatcatctgcaacaaaacccctcaaca 188
|||||| ||||| |||||||| |||||||| |||| || ||||||||||||| ||| |
Sbjct: 436 ttggagaaaccaccaccaccaccgtactcctctcactgtccgcaacaaaaccccccaaga 495
Query: 189 aatttcccgttctgccgccctccgccgtgagccgccgccg 228
||||| ||||| |||||||||| ||| |||||||||||
Sbjct: 496 aatttgtcgttccgccgccctccaccgccagccgccgccg 535
>gnl|LJGI|TC69995 similar to UniRef100_Q2HBE7 Cluster: ATP-dependent RNA helicase
DED1; n=1; Chaetomium globosum|Rep: ATP-dependent RNA
helicase DED1 - Chaetomium globosum (Soil fungus),
partial (3%)
Length = 669
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
|||||||||||||||| | | ||||||| ||| |||||||||| | |||||||||||
Sbjct: 121 gatctccggcgaaccattaagtttttggagaaacaaacaccaccactgaactcccctcat 180
Query: 165 catctgcaacaaaacccctc 184
|||| |||||||||||||||
Sbjct: 181 catccgcaacaaaacccctc 200
>gnl|LJGI|DC595452 similar to UniRef100_Q54L02 Cluster: LIM domain-containing protein;
n=1; Dictyostelium discoideum|Rep: LIM domain-containing
protein - Dictyostelium discoideum (Slime mold), partial
(3%)
Length = 436
Score = 69.9 bits (35), Expect = 1e-11
Identities = 124/150 (82%), Gaps = 4/150 (2%)
Strand = Plus / Plus
Query: 17 ccatcacccacgcccgggaccatgagcgacgccaccaacgcaaggg--acagggaaaacg 74
||||||||||| ||| | |||||| ||||||||||||||||||| | || |||||||
Sbjct: 286 ccatcacccactcccagcgccatgaacgacgccaccaacgcaaggacaagagagaaaacg 345
Query: 75 aaaccctaaccaccgctaccttctc-ctcctgatctccggcgaaccactcatcatttgga 133
||||||||| ||||| |||||| |||| |||||||||||||||||| | ||||||
Sbjct: 346 aaaccctaaaaaccgccaccttccaactcc-gatctccggcgaaccactgagtttttgga 404
Query: 134 ggaaccaacaccaccatcgtactcccctca 163
| ||||||| |||||| | ||||||||||
Sbjct: 405 gaaaccaaccacaccatggaactcccctca 434
>gnl|LJGI|TC59791
Length = 736
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 103 ctgatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctc 162
|||||||||||||||||| | | ||||||| |||||||||||||| | |||||||||
Sbjct: 227 ctgatctccggcgaaccattaagtttttggagaaaccaacaccaccactgaactcccctc 286
Query: 163 atcatctgcaacaaaaccc 181
|||| | ||||||||||||
Sbjct: 287 atcaaccgcaacaaaaccc 305
>gnl|LJGI|GO034205 similar to UniRef100_Q7UYB6 Cluster: Probable serine/threonine
protein kinase related protein; n=1; Pirellula sp.|Rep:
Probable serine/threonine protein kinase related protein
- Rhodopirellula baltica, partial (4%)
Length = 722
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 117 accactcatcatttggaggaaccaacaccaccatcgtactcccctcatcatctgcaacaa 176
|||||| ||| ||||||| || |||||||||||| | ||||| ||||||||| |||||||
Sbjct: 269 accactaatcttttggagaaatcaacaccaccattggactcctctcatcatccgcaacaa 328
Query: 177 aacccc 182
||||||
Sbjct: 329 aacccc 334
>gnl|LJGI|AV416076
Length = 414
Score = 67.9 bits (34), Expect = 4e-11
Identities = 94/109 (86%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 17 ccatcacccacgcccgggaccatgagcgacgccaccaacgcaagg--gacagggaaaacg 74
||||||||||| ||| | ||||||| ||||||||||||||||||| | || |||||||
Sbjct: 249 ccatcacccactcccagcaccatgaacgacgccaccaacgcaaggaccatagtgaaaacg 308
Query: 75 aaaccctaaccaccgctacc-ttctcctcctgatctccggcgaaccact 122
||||||||| ||||| ||| |||| |||| ||||||||||||||||||
Sbjct: 309 aaaccctaa-aaccgccacctttcttctcc-gatctccggcgaaccact 355
>gnl|LJGI|AV769328 weakly similar to UniRef100_A8JFD4 Cluster: Glyoxal or galactose
oxidase; n=1; Chlamydomonas reinhardtii|Rep: Glyoxal or
galactose oxidase - Chlamydomonas reinhardtii, partial
(4%)
Length = 600
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 128 tttggaggaaccaacaccaccatcgtactcccctcatcatctgcaacaaaacccctc 184
||||||| ||| |||||||||| | ||||||||||||||| |||||||||||||||
Sbjct: 345 tttggagaaacaaacaccaccaatgaactcccctcatcatccgcaacaaaacccctc 401
>gnl|LJGI|TC70550
Length = 963
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 128 tttggaggaaccaacaccaccatcgtactcccctcatcatctgcaacaaaacccctc 184
||||||| ||| |||||||||| | ||||||||||||||| |||||||||||||||
Sbjct: 405 tttggagaaacaaacaccaccaatgaactcccctcatcatccgcaacaaaacccctc 461
>gnl|LJGI|GO022351 similar to UniRef100_Q63934 Cluster: POU domain, class 4,
transcription factor 2; n=1; Mus musculus|Rep: POU
domain, class 4, transcription factor 2 - Mus musculus
(Mouse), partial (6%)
Length = 544
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
|||||||||||||||| | | ||||||| ||| |||||||||| | |||||||||||
Sbjct: 262 gatctccggcgaaccattaagtttttggagaaacaaacaccaccactgaactcccctcat 321
Query: 165 catctgcaacaaaacccctc 184
|||| |||||||||| ||||
Sbjct: 322 catccgcaacaaaacacctc 341
>gnl|LJGI|BW598656 similar to UniRef100_Q0DI92 Cluster: Os05g0406900 protein; n=1;
Oryza sativa Japonica Group|Rep: Os05g0406900 protein -
Oryza sativa subsp. japonica (Rice), partial (7%)
Length = 481
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
|||||||||||||||| | | ||||||| |||||||||||||| | ||||| |||||
Sbjct: 450 gatctccggcgaaccattaagtttttggagaaaccaacaccaccactgaactcctctcat 391
Query: 165 catctgcaacaaaacccct 183
|| | ||||||||||||||
Sbjct: 390 caaccgcaacaaaacccct 372
>gnl|LJGI|BP050007
Length = 567
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
||||||||||||||| |||||| ||||| ||| ||||||||| | | ||||||||||
Sbjct: 201 gatctccggcgaaccgctcatctactggagaaactaacaccaccgttggactcccctcac 260
Query: 165 catctgcaacaaaacccctcaa 186
| || | |||||||||||||||
Sbjct: 261 cttccggaacaaaacccctcaa 282
>gnl|LJGI|TC76833 homologue to UniRef100_A5DSL6 Cluster: Predicted protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Predicted
protein - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus), partial (11%)
Length = 1147
Score = 60.0 bits (30), Expect = 1e-08
Identities = 122/149 (81%), Gaps = 4/149 (2%)
Strand = Plus / Plus
Query: 17 ccatcacccacgcccgggaccatgagcgacgccaccaacgcaaggg--acagggaaaacg 74
||||||||||| ||| | |||||| || |||||||||||||||| | || |||||||
Sbjct: 261 ccatcacccactcccagcgccatgaacggcgccaccaacgcaaggacaagagagaaaacg 320
Query: 75 aaaccctaaccaccgctaccttctc-ctcctgatctccggcgaaccactcatcatttgga 133
||||||||| ||||| |||||| |||| |||||||||||||||||| | ||||||
Sbjct: 321 aaaccctaaaaaccgccaccttccaactcc-gatctccggcgaaccactgagtttttgga 379
Query: 134 ggaaccaacaccaccatcgtactcccctc 162
| ||||||| |||||| | |||||||||
Sbjct: 380 gaaaccaaccacaccatggaactcccctc 408
>gnl|LJGI|TC66517
Length = 907
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
||||||||||||||| |||||| ||||| ||| ||||||||| | | ||||| |||||
Sbjct: 379 gatctccggcgaaccgctcatctactggagaaactaacaccaccgttggactcctctcat 438
Query: 165 catctgcaacaaaacccc 182
| || |||||||||||||
Sbjct: 439 cgtccgcaacaaaacccc 456
>gnl|LJGI|TC81013
Length = 805
Score = 58.0 bits (29), Expect = 4e-08
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
||||||||||||||| || | | ||||||| ||| || ||||||| | |||||||||||
Sbjct: 364 gatctccggcgaaccccttagcttttggagaaacgaataccaccactgaactcccctcat 423
Query: 165 catctgcaacaaaacccctcaacaaattt 193
|||| || |||||||||| || ||||||
Sbjct: 424 catcagcttcaaaacccctaaagaaattt 452
>gnl|LJGI|TC77093 similar to UniRef100_Q6NTE5 Cluster: Zgc:77291; n=1; Danio
rerio|Rep: Zgc:77291 - Danio rerio (Zebrafish)
(Brachydanio rerio), partial (4%)
Length = 921
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
|||||||||||||||| | | ||||||| |||| ||| ||||| | |||| ||||||
Sbjct: 176 gatctccggcgaaccattaagtttttggagaaaccgacatcaccactgaactctcctcat 235
Query: 165 catctgcaacaaaacccctc 184
|||| |||||||||||||||
Sbjct: 236 catccgcaacaaaacccctc 255
>gnl|LJGI|TC75551
Length = 992
Score = 56.0 bits (28), Expect = 2e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
|||||||||||||||||| | | ||||||| || ||||||||||| | ||||| ||||
Sbjct: 347 gatctccggcgaaccactgagcttttggagaaatcaacaccaccactgaactcctctcac 406
Query: 165 catctgcaacaaaacccctcaacaaatt 192
| || || ||||||||||| || |||||
Sbjct: 407 cgtccgctacaaaacccctaaagaaatt 434
>gnl|LJGI|TC74186 similar to UniRef100_Q91D04 Cluster: ORF1; n=8; Torque teno
virus|Rep: ORF1 - Torque teno virus, partial (4%)
Length = 840
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 208 ctccgccgtgagccgccgccggaagcgatttctggcgagccact 251
||||||||||||||| ||||||| |||||||| |||||| ||||
Sbjct: 411 ctccgccgtgagccgtcgccggaggcgatttccggcgagtcact 454
>gnl|LJGI|TC69209 weakly similar to UniRef100_Q7TPA7 Cluster: Ab1-013; n=2; Rattus
norvegicus|Rep: Ab1-013 - Rattus norvegicus (Rat),
partial (9%)
Length = 1170
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
|||||||||||||||| | | ||||||| ||||||| |||||| | ||||| |||||
Sbjct: 953 gatctccggcgaaccattaagtttttggagaaaccaacgccaccactgaactcctctcat 894
Query: 165 catctgcaacaaaacccct 183
|| | ||||||||||||||
Sbjct: 893 caaccgcaacaaaacccct 875
>gnl|LJGI|TC65754 similar to UniRef100_Q63934 Cluster: POU domain, class 4,
transcription factor 2; n=1; Mus musculus|Rep: POU
domain, class 4, transcription factor 2 - Mus musculus
(Mouse), partial (6%)
Length = 805
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 105 gatctccggcgaaccactcatcatttggaggaaccaacaccaccatcgtactcccctcat 164
|||||||||||||||| | | ||||||| ||||||| |||||| | ||||| |||||
Sbjct: 252 gatctccggcgaaccattaagtttttggagaaaccaacgccaccactgaactcctctcat 311
Query: 165 catctgcaacaaaacccct 183
|| | ||||||||||||||
Sbjct: 312 caaccgcaacaaaacccct 330
>gnl|LJGI|TC77885
Length = 974
Score = 52.0 bits (26), Expect = 2e-06
Identities = 91/109 (83%), Gaps = 4/109 (3%)
Strand = Plus / Plus
Query: 17 ccatcacccacgcccgggaccatgagcgacgccaccaacgcaagg--gacagggaaaacg 74
||||||||||| ||| | |||||| || |||||||||||||||| | || |||||||
Sbjct: 429 ccatcacccactcccagcgccatgaacggcgccaccaacgcaaggacaagagagaaaacg 488
Query: 75 aaaccctaaccaccgctacc-ttctcctcctgatctccggcgaaccact 122
||||||||| ||||| ||| ||| |||| ||||||||||||||||||
Sbjct: 489 aaaccctaaaaaccgccacctttcaactcc-gatctccggcgaaccact 536
>gnl|LJGI|TC66368 similar to UniRef100_UPI0000EB20E2 Cluster: Coiled-coil
domain-containing protein 43.; n=1; Canis lupus
familiaris|Rep: Coiled-coil domain-containing protein
43. - Canis familiaris, partial (12%)
Length = 816
Score = 50.1 bits (25), Expect = 9e-06
Identities = 80/97 (82%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 87 ccgctaccttctcctcctgatctccggcgaaccactcatcatttggaggaaccaacacca 146
|||| ||||| |||||| ||||| |||||||||| | | ||||||| ||||||| |||
Sbjct: 177 ccgccaccttttcctcc-gatcttcggcgaaccattaagtttttggagaaaccaacgcca 235
Query: 147 ccatcgtactcccctcatcatctgcaacaaaacccct 183
||| | ||||| ||||||| | ||||||||||||||
Sbjct: 236 ccactgaactcctctcatcaaccgcaacaaaacccct 272