Miyakogusa Predicted Gene

Lj2g3v3044220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3044220.1 Non Characterized Hit- tr|I1JIX9|I1JIX9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43088
PE,70.9,0,DUF702,Protein of unknown function DUF702; FAMILY NOT
NAMED,NULL; LRP1_Cterm: LRP1 C-terminal domain,CUFF.39632.1
         (348 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089750.1 | lateral root primordium (LRP)-like protein | H...   291   6e-79
Medtr3g014660.1 | LRP1 carboxy-terminal domain protein | HC | ch...   178   6e-45
Medtr8g039110.1 | LRP1 carboxy-terminal domain protein | HC | ch...   160   2e-39
Medtr8g076620.1 | zinc finger, LRP1 type protein | HC | chr8:324...   140   1e-33
Medtr5g021130.1 | transcription factor, putative | HC | chr5:810...   122   4e-28
Medtr3g112510.1 | transcription factor, putative | LC | chr3:527...   120   2e-27
Medtr4g071110.1 | zinc finger, LRP1 type protein | LC | chr4:267...   105   6e-23
Medtr0363s0040.1 | zinc finger, LRP1 type protein, putative | HC...    90   3e-18
Medtr1g023230.1 | zinc finger, LRP1 type protein | HC | chr1:741...    89   9e-18
Medtr0105s0070.1 | zinc finger, LRP1 type protein, putative | HC...    59   9e-09

>Medtr5g089750.1 | lateral root primordium (LRP)-like protein | HC |
           chr5:39020566-39017917 | 20130731
          Length = 467

 Score =  291 bits (745), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 167/308 (54%), Positives = 183/308 (59%), Gaps = 27/308 (8%)

Query: 1   MGMFVVAPASSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNPATALGVGVIPLLTA-- 58
           MGMFVVAP SSF                             LNPATALGVGVIPLLTA  
Sbjct: 126 MGMFVVAP-SSFHHHHHNNNHHEALMSDPHS----------LNPATALGVGVIPLLTASP 174

Query: 59  -IDNDNATTNMLSRRNQ-GIX----XXXXXXXXXXXXXXYMKNKQGNLLEHNVSSGNLVH 112
            ++N+N    + SRRNQ GI                   Y+K +QG L  HN S  NLVH
Sbjct: 175 CLENENM---LNSRRNQQGIQFWHEQHHQQQQQQSPHSHYLKKQQGFLDHHNTSPTNLVH 231

Query: 113 L--XXXXXXXXXXXXXXCQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRR 170
                            CQDCGNQAKKDC+NRRCRTCCKSRGFDCPTHVKSTWVPAARRR
Sbjct: 232 GGGLTASGTSSGGGTTTCQDCGNQAKKDCSNRRCRTCCKSRGFDCPTHVKSTWVPAARRR 291

Query: 171 ERQLMXXXXXXXXXXXXXXXXXXXKKPRLVGXXXXXXXXXXXXXXXXPPRSFETSSSHQD 230
           ER                      KKPRL+                 PPRSF+T+SSHQD
Sbjct: 292 ERLSSTATTTVVAGGGSSGSTSGAKKPRLIASQTTSHTSTSNTT---PPRSFDTTSSHQD 348

Query: 231 ASFKETMPGQVRAPAVFKCVRVTAVEDGKDEYAYQAVVKIGGHVFKGFLYDQGLENRDVY 290
           A FK++MPGQVRAPAVFKCVRVT+V+DGKDEYAYQAVVKIGGHVFKGFLYD G+ENR+VY
Sbjct: 349 AGFKDSMPGQVRAPAVFKCVRVTSVDDGKDEYAYQAVVKIGGHVFKGFLYDHGVENREVY 408

Query: 291 SNFSELHL 298
            N SELHL
Sbjct: 409 PNLSELHL 416


>Medtr3g014660.1 | LRP1 carboxy-terminal domain protein | HC |
           chr3:4203654-4198130 | 20130731
          Length = 329

 Score =  178 bits (452), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 86/171 (50%), Positives = 105/171 (61%), Gaps = 3/171 (1%)

Query: 128 CQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMXXXXXXXXXXXX 187
           CQDCGN+AKKDC  RRCRTCCK RG+DC TH+KSTW+P+ RRRER++             
Sbjct: 134 CQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREV---EMFAGGGDGE 190

Query: 188 XXXXXXXKKPRLVGXXXXXXXXXXXXXXXXPPRSFETSSSHQDASFKETMPGQVRAPAVF 247
                  +K  L                   P+SF TSS HQDA FKE +PG V APAVF
Sbjct: 191 GCSGVKRQKGLLGSSQNAAATSHSSNSNGTTPKSFATSSCHQDAGFKEGLPGHVNAPAVF 250

Query: 248 KCVRVTAVEDGKDEYAYQAVVKIGGHVFKGFLYDQGLENRDVYSNFSELHL 298
           +C RVTA+ +G+DE+AY A V I GHVFKGFLYD G++ ++     SEL L
Sbjct: 251 RCHRVTAIGNGEDEFAYLATVHISGHVFKGFLYDHGVDGKNPMPCVSELQL 301


>Medtr8g039110.1 | LRP1 carboxy-terminal domain protein | HC |
           chr8:14512197-14513962 | 20130731
          Length = 327

 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/175 (47%), Positives = 102/175 (58%), Gaps = 4/175 (2%)

Query: 128 CQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMXXXXXXXXXXXX 187
           CQDCGN+AKKDC+ +RCRTCCK RGFDC THVKSTW+PA+ RR+R ++            
Sbjct: 124 CQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMVVAEGGDSDGGAS 183

Query: 188 XXXXXXXKKPRLVGXXXXXXXXXXXXXXXXPPRSFE---TSSSHQDASFKETMPGQVRAP 244
                                           RS     TSS HQD  FK+T+P  VRAP
Sbjct: 184 SGTKRQKILMTSSQNNVAANSHSSSSNAATRTRSLSLDITSSCHQDPGFKQTLPRYVRAP 243

Query: 245 AVFKCVRVTAVEDGKDEYAYQAVVKIGGHVFKGFLYDQGLENR-DVYSNFSELHL 298
           AVFKC RV+A+ +G+DE AY A V I GHVFKGFLYDQG++++ +     SEL L
Sbjct: 244 AVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGVDDKNETMPCVSELQL 298


>Medtr8g076620.1 | zinc finger, LRP1 type protein | HC |
           chr8:32482156-32484876 | 20130731
          Length = 331

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/158 (48%), Positives = 90/158 (56%), Gaps = 26/158 (16%)

Query: 128 CQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMXXXXXXXXXXXX 187
           CQDCGNQAKKDC + RCRTCCKSRGF C THVKSTWVPA+RRRERQ              
Sbjct: 121 CQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPASRRRERQ--------QQLSSS 172

Query: 188 XXXXXXXKKPRLVGXXXXXXXXXXXXXXXXPPRSFETSSSHQDASFKETMPGQVRAPAVF 247
                  K+PR                     R+F T    ++A+F    P  V +PA F
Sbjct: 173 PLQRDISKRPR------------DGSNALVSTRNFHT--GLEEANF----PAVVSSPAEF 214

Query: 248 KCVRVTAVEDGKDEYAYQAVVKIGGHVFKGFLYDQGLE 285
           +CVRV++++D  D YAYQ  V IGGH+FKG LYD G E
Sbjct: 215 RCVRVSSIDDADDRYAYQTAVNIGGHLFKGILYDFGPE 252


>Medtr5g021130.1 | transcription factor, putative | HC |
           chr5:8100971-8103215 | 20130731
          Length = 323

 Score =  122 bits (307), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 86/156 (55%), Gaps = 4/156 (2%)

Query: 128 CQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMXXXXXXXXXXXX 187
           CQDCGNQAKKDC + RCRTCCKSRGFDC THVKSTWVPAARRRERQ              
Sbjct: 100 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAARRRERQQQQQQQQLSAPKSF 159

Query: 188 XXXXXXXKKPRLVGXXXXXXXXXXXXXXXXPPRSFETSSSHQDASFKETMPGQVRAPAVF 247
                   + R                      +  ++    + +F    P  V +PA F
Sbjct: 160 QQHGDIVPQNRHRDLNNNNSSLACTRLPTNRSLTLPSAGLLDEMNF----PAVVNSPAEF 215

Query: 248 KCVRVTAVEDGKDEYAYQAVVKIGGHVFKGFLYDQG 283
           +CVRV++V++ ++EYAY   V IGGHVF+G LYD G
Sbjct: 216 RCVRVSSVDENEEEYAYSTAVNIGGHVFRGILYDYG 251


>Medtr3g112510.1 | transcription factor, putative | LC |
           chr3:52767953-52766535 | 20130731
          Length = 294

 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 88/162 (54%), Gaps = 21/162 (12%)

Query: 128 CQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMXXXXXXXXXXXX 187
           CQDCGNQAKKDC + RCRTCCKSRGF C THVKSTWVPAA+RRERQ              
Sbjct: 86  CQDCGNQAKKDCIHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQ-------------Q 132

Query: 188 XXXXXXXKKPRLVGXXXXXXXXXXXXXXXXPPRSFETSSSHQDASFKETMPGQVRAPAV- 246
                  ++   V                  P+    ++  +   F    P +V +P V 
Sbjct: 133 HLSALPFRRRDHVDNYKRHTEINQGATSLPFPQPPIPTTGLELGQF----PPEVSSPGVT 188

Query: 247 FKCVRVTAVEDGKD--EYAYQAVVKIGGHVFKGFLYDQGLEN 286
           F+CVRV+++ DG D  + AYQ  V IGGHVFKG LYDQG  N
Sbjct: 189 FRCVRVSSL-DGPDHEQCAYQTAVNIGGHVFKGILYDQGPPN 229


>Medtr4g071110.1 | zinc finger, LRP1 type protein | LC |
           chr4:26795870-26794245 | 20130731
          Length = 264

 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 77/156 (49%), Gaps = 35/156 (22%)

Query: 128 CQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMXXXXXXXXXXXX 187
           CQDCGNQAKKDC   RCR+CCK++GF+C TH++STW+PA RRR R               
Sbjct: 17  CQDCGNQAKKDCAYSRCRSCCKNKGFNCHTHIRSTWIPADRRRHRM---------DHPSD 67

Query: 188 XXXXXXXKKPRLVGXXXXXXXXXXXXXXXXPPRSFETSSSHQDASFKETMPGQVRAPAVF 247
                  K+ + +                       T SS  +  F    P    +    
Sbjct: 68  QHHLHEHKRHKQIN----------------------TISSSDEFKF----PAVTSSMTTL 101

Query: 248 KCVRVTAVEDGKDEYAYQAVVKIGGHVFKGFLYDQG 283
            CV+V ++++  +E AYQ  V+IGGHVF G LYDQG
Sbjct: 102 TCVQVRSMDETVNETAYQTSVEIGGHVFSGILYDQG 137


>Medtr0363s0040.1 | zinc finger, LRP1 type protein, putative | HC |
           scaffold0363:17438-16319 | 20130731
          Length = 245

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 43/48 (89%)

Query: 128 CQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLM 175
           CQDCGN+AKKDC+ +RCRTCCK RGFDC THVKSTW+PA+ RR+R ++
Sbjct: 124 CQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMV 171


>Medtr1g023230.1 | zinc finger, LRP1 type protein | HC |
           chr1:7419015-7417436 | 20130731
          Length = 252

 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 41/45 (91%)

Query: 128 CQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRER 172
           CQDCGNQAKKDC + RCRTCCKSRGF C THVKSTWVPAA+RRER
Sbjct: 122 CQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 166


>Medtr0105s0070.1 | zinc finger, LRP1 type protein, putative | HC |
           scaffold0105:24983-22116 | 20130731
          Length = 86

 Score = 58.5 bits (140), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/33 (63%), Positives = 28/33 (84%)

Query: 130 DCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKST 162
           DCGNQAKKDC   RCR+CCK++ F+C TH+K++
Sbjct: 44  DCGNQAKKDCAYSRCRSCCKNKDFNCHTHIKTS 76