Miyakogusa Predicted Gene

Lj2g3v3019690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3019690.1 Non Chatacterized Hit- tr|I1L265|I1L265_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57327 PE,82,0,PROTEIN
AATF (APOPTOSIS-ANTAGONIZING TRANSCRIPTION FACTOR),NULL; AATF PROTEIN
(APOPTOSIS ANTAGONIZIN,CUFF.39616.1
         (395 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61330.1 | Symbols:  | rRNA processing protein-related | chr5...   397   e-111

>AT5G61330.1 | Symbols:  | rRNA processing protein-related |
           chr5:24657287-24660103 REVERSE LENGTH=436
          Length = 436

 Score =  397 bits (1020), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/336 (61%), Positives = 248/336 (73%), Gaps = 11/336 (3%)

Query: 62  NDDDEMEQLEKEYRDLHHQELDTLKNLKHHKDEDFLKGQAVKNQKALWYKILELRFLLQK 121
           N D +ME+LEKE ++L  QE D LKNLK  K ED +KGQAVKNQKALW KILE RFLLQK
Sbjct: 109 NKDAQMEELEKEVKELRSQEQDILKNLKRDKGEDAVKGQAVKNQKALWDKILEFRFLLQK 168

Query: 122 PFTSSNRLPQESIKTSFCEADETVGVAYSDLMTSTKETLDSIVELQEALFANNPSITQ-- 179
            F  SNRLPQE +K+ FC  DE V  AY+DL+TS+K+TLDS++ELQEALF  NPS+ Q  
Sbjct: 169 AFDRSNRLPQEPVKSLFCSEDEDVSTAYTDLVTSSKKTLDSLLELQEALFEKNPSVDQQV 228

Query: 180 -ATDGSERTSKDLEVSKHLDDNLDQEWSQISQRHKSMASFRDKSINKWQRMTQVTTGAAA 238
            AT   E    D E S         EW +IS   K M+ FR+K+++KWQR TQVTTGAAA
Sbjct: 229 NATASEESNKSDAEDS--------DEWQRISDLQKRMSVFRNKAVDKWQRKTQVTTGAAA 280

Query: 239 IKGKLHAFNQDISHQVAAYMRDPSRMTKQMQLRRSAVGIFGSVPEVNDSSKEVETHADAD 298
           IKGKLHAFNQ++S QVA+YMRDPSRM KQMQ  RS V +FG+VP+        E   + D
Sbjct: 281 IKGKLHAFNQNVSEQVASYMRDPSRMIKQMQQSRSTVAVFGTVPQEAMEPNPEEKQEEGD 340

Query: 299 PELLDDSEFYQQLLKEFLETVDPSSSEKAFYALKRMQPKKRKIVDRRASKSRKIRYNVHE 358
           PEL++D+EFY+QLLKEFLET+DP+SSE AFY +K+ Q KKRK+VDRRASKSRKIRYNVHE
Sbjct: 341 PELVEDAEFYRQLLKEFLETIDPASSEAAFYEMKKFQTKKRKVVDRRASKSRKIRYNVHE 400

Query: 359 KIVNFMAPQPVNLPDMAPMLFEDLFGLKTQRSSAAA 394
           KIVNFMAP+P  +P     L ++LFGLKT+   + A
Sbjct: 401 KIVNFMAPRPAKIPPNTADLLKNLFGLKTRNVQSEA 436