Miyakogusa Predicted Gene

Lj2g3v2876130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2876130.1 Non Chatacterized Hit- tr|D8QWY6|D8QWY6_SELML
Putative uncharacterized protein OS=Selaginella moelle,40.68,4e-19,
,CUFF.39373.1
         (205 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g43490.2                                                       320   7e-88
Glyma02g43490.1                                                       288   3e-78
Glyma14g05500.1                                                       276   2e-74

>Glyma02g43490.2 
          Length = 198

 Score =  320 bits (820), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 156/204 (76%), Positives = 173/204 (84%), Gaps = 8/204 (3%)

Query: 1   MQRLRRSITGGGGSVSPANLKRLSRNSWAAIQDTFFSTKDTFERHRVIFTVGTSIASVAT 60
           MQRLR S+  G       NLK+   NS AAI+DTFFSTKDTFERHRV+FTVGTSIASVAT
Sbjct: 1   MQRLRSSVLSG------PNLKKKYLNSRAAIEDTFFSTKDTFERHRVVFTVGTSIASVAT 54

Query: 61  AWIGYSLRHLHDSRVDQRLQSIEDAMKNNNNLHHSEIKDIVGTGGGCSLPTCVATAGTTL 120
           AW GYSLRHLHD++VDQRLQSIE+AMKNN NL HSEIKDIV  G  CS+P CVATAGT+L
Sbjct: 55  AWFGYSLRHLHDTKVDQRLQSIENAMKNNTNLQHSEIKDIVAEG--CSIPACVATAGTSL 112

Query: 121 IVGYGLGWRGGIWYATKKFRREQMKVLGQIKPRRWQLLGKIKPRGWQFQSLRKSLTRSKV 180
           I+GY LGWRGGIWYATKKFR+EQMK+LGQI P+RWQLLGKIKPRG +FQ LR+ LTRSKV
Sbjct: 113 IIGYALGWRGGIWYATKKFRKEQMKMLGQITPKRWQLLGKIKPRGLEFQFLRRKLTRSKV 172

Query: 181 PDTAVKTSETTVKDASTPHITGKS 204
            DTA KTSET++KDAST HI GKS
Sbjct: 173 FDTATKTSETSIKDASTTHIAGKS 196


>Glyma02g43490.1 
          Length = 1070

 Score =  288 bits (737), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 135/170 (79%), Positives = 150/170 (88%), Gaps = 2/170 (1%)

Query: 35   FFSTKDTFERHRVIFTVGTSIASVATAWIGYSLRHLHDSRVDQRLQSIEDAMKNNNNLHH 94
            F  + DTFERHRV+FTVGTSIASVATAW GYSLRHLHD++VDQRLQSIE+AMKNN NL H
Sbjct: 871  FGQSDDTFERHRVVFTVGTSIASVATAWFGYSLRHLHDTKVDQRLQSIENAMKNNTNLQH 930

Query: 95   SEIKDIVGTGGGCSLPTCVATAGTTLIVGYGLGWRGGIWYATKKFRREQMKVLGQIKPRR 154
            SEIKDIV  G  CS+P CVATAGT+LI+GY LGWRGGIWYATKKFR+EQMK+LGQI P+R
Sbjct: 931  SEIKDIVAEG--CSIPACVATAGTSLIIGYALGWRGGIWYATKKFRKEQMKMLGQITPKR 988

Query: 155  WQLLGKIKPRGWQFQSLRKSLTRSKVPDTAVKTSETTVKDASTPHITGKS 204
            WQLLGKIKPRG +FQ LR+ LTRSKV DTA KTSET++KDAST HI GKS
Sbjct: 989  WQLLGKIKPRGLEFQFLRRKLTRSKVFDTATKTSETSIKDASTTHIAGKS 1038


>Glyma14g05500.1 
          Length = 184

 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 130/169 (76%), Positives = 147/169 (86%), Gaps = 2/169 (1%)

Query: 20  LKRLSRNSWAAIQDTFFSTKDTFERHRVIFTVGTSIASVATAWIGYSLRHLHDSRVDQRL 79
           LK+   NS AAI+DT+FSTKDTFERHRV+FTVGTSIASVATAW GYSLRHLHD +VDQRL
Sbjct: 11  LKKKYLNSRAAIEDTYFSTKDTFERHRVVFTVGTSIASVATAWFGYSLRHLHDIKVDQRL 70

Query: 80  QSIEDAMKNNNNLHHSEIKDIVG--TGGGCSLPTCVATAGTTLIVGYGLGWRGGIWYATK 137
           QSIE++MKNN+NL HS+IKDIV     G  S+P CVATAGT+LI+GY LGWRGGIWYATK
Sbjct: 71  QSIENSMKNNSNLQHSQIKDIVAGSASGAFSIPACVATAGTSLIIGYALGWRGGIWYATK 130

Query: 138 KFRREQMKVLGQIKPRRWQLLGKIKPRGWQFQSLRKSLTRSKVPDTAVK 186
           KFR+EQMK+LGQI P+RWQLLGKIKPRG+QFQ LR+ LTR KV DTA K
Sbjct: 131 KFRKEQMKMLGQITPKRWQLLGKIKPRGFQFQFLRRKLTRFKVSDTATK 179