Miyakogusa Predicted Gene

Lj2g3v2876130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2876130.1 Non Chatacterized Hit- tr|D8QWY6|D8QWY6_SELML
Putative uncharacterized protein OS=Selaginella moelle,40.68,4e-19,
,CUFF.39373.1
         (205 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04985.1 | Symbols:  | unknown protein; Has 37 Blast hits to ...   202   1e-52

>AT1G04985.1 | Symbols:  | unknown protein; Has 37 Blast hits to 37
           proteins in 11 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:1416563-1418291 REVERSE LENGTH=193
          Length = 193

 Score =  202 bits (515), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/191 (58%), Positives = 139/191 (72%), Gaps = 3/191 (1%)

Query: 1   MQRLRRSITGGGGSVSPANLKRLSRNSWAAIQDTFFSTKDTFERHRVIFTVGTSIASVAT 60
           M RLR   T   GS     LK+ + NS  A+QD++ STKD FERHRV+FTVGTSIASVAT
Sbjct: 1   MNRLRGRGTPILGSALVPQLKKKALNSLVAVQDSYLSTKDLFERHRVVFTVGTSIASVAT 60

Query: 61  AWIGYSLRHLHDSRVDQRLQSIEDAMKNNNNLHHSEIKDIVGTGGGCSLPTCVATAGTTL 120
           AWIGYSLRH +++R++QRL+SIE+AMKN   L   E+K +V    G    T +ATAGTTL
Sbjct: 61  AWIGYSLRHYNETRINQRLESIENAMKNTQELERGELKKLVDP-VGSRFTTTIATAGTTL 119

Query: 121 IVGYGLGWRGGIWYATKKFRREQMKVLGQIKPRRWQLLGKIKPRGWQ-FQSLRKSLTR-S 178
           I+GYGLGWRGGIWYA +KFRREQM++ GQ+KPR W+LLG+IKPR W   + LR+   R +
Sbjct: 120 ILGYGLGWRGGIWYANRKFRREQMRLAGQLKPREWKLLGRIKPRAWPTTKFLRRPFPRQN 179

Query: 179 KVPDTAVKTSE 189
           K  + A+K  E
Sbjct: 180 KTTENALKAPE 190