Miyakogusa Predicted Gene

Lj2g3v2674940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2674940.1 tr|B9GGL3|B9GGL3_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_171742
PE=4,47.33,9e-18,seg,NULL,CUFF.39193.1
         (173 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g03620.1                                                       232   1e-61
Glyma11g14320.1                                                       142   2e-34
Glyma12g06250.1                                                       139   2e-33
Glyma11g14340.1                                                       135   3e-32
Glyma08g45700.1                                                       105   2e-23
Glyma18g24530.1                                                        95   3e-20
Glyma11g34680.1                                                        83   1e-16
Glyma12g06270.1                                                        60   1e-09

>Glyma18g03620.1 
          Length = 180

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 122/172 (70%), Positives = 136/172 (79%), Gaps = 6/172 (3%)

Query: 8   TSVHITALDAIVNVNSLFTLAVFIGLTWNPHDPENNLNSDPACAPTAAIAENLVAFHVYX 67
           TS+HITALDAIVNVNSLFTLAVFIGLTWNP+DP N+LNSDPACAPTAAIAENL+AFHVY 
Sbjct: 9   TSLHITALDAIVNVNSLFTLAVFIGLTWNPNDPSNSLNSDPACAPTAAIAENLIAFHVYS 68

Query: 68  XXXXXXXXXIALALKQAIRLTRTSAY-TPA-----VAHVNRSCLRLVMXXXXXXXXXXCL 121
                    +ALALKQAIRL+RT+++  PA     VA VNR+ LRL M          C 
Sbjct: 69  FSSFLFSSLVALALKQAIRLSRTTSFHYPAVVDHLVADVNRTALRLGMLVSGVGSVAGCA 128

Query: 122 FLMLALVNVVQIKLGTLACGSSHAFAAIVPLFIFVPIALLIYVSVVFYAFTR 173
           FLMLALVNV QIKLGTLACGSSH +AA+VPL IFVP+ALLIYVS+V YAFTR
Sbjct: 129 FLMLALVNVAQIKLGTLACGSSHTYAAVVPLLIFVPLALLIYVSLVLYAFTR 180


>Glyma11g14320.1 
          Length = 177

 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/178 (46%), Positives = 104/178 (58%), Gaps = 20/178 (11%)

Query: 14  ALDAIVNVNSLFTLAVFIGLTWNPHDPENNL--NSDPACAPTAAIAENLVAFHVYXXXXX 71
           ALD IVNVNSLFTLA+F+G+T       NNL  + DPACA   +I+E+L+AFHVY     
Sbjct: 2   ALDGIVNVNSLFTLALFLGITTTS--TTNNLIGDDDPACAAGTSISEDLIAFHVYSFSSF 59

Query: 72  XXXXXIALALKQAIRLTRT----------------SAYTPAVAHVNRSCLRLVMXXXXXX 115
                IALALK  I  ++                 + +  +VA +N   LRL        
Sbjct: 60  LFSSLIALALKNIINFSKDIKDGDIVLDSSNNNNNNNWVHSVAKINTVVLRLGTLVSAFG 119

Query: 116 XXXXCLFLMLALVNVVQIKLGTLACGSSHAFAAIVPLFIFVPIALLIYVSVVFYAFTR 173
               C FL++ALV++VQIKLGTL CGS H FAA+ PL + VP ALLIYV +V YAFTR
Sbjct: 120 SVFGCGFLVMALVDLVQIKLGTLGCGSPHTFAAVAPLLVLVPTALLIYVVLVLYAFTR 177


>Glyma12g06250.1 
          Length = 182

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/181 (44%), Positives = 106/181 (58%), Gaps = 12/181 (6%)

Query: 5   SSITSVHITALDAIVNVNSLFTLAVFIGLTWNPHDPENNLNSDPACAPTAAIAENLVAFH 64
           ++ T +HI ALD IVNVNSLFTLA+F+G+T          + + ACA  A+I+E L+AFH
Sbjct: 2   TTTTRIHIMALDGIVNVNSLFTLALFLGITTTSTTNTLIGDDNAACAAGASISEGLIAFH 61

Query: 65  VYXXXXXXXXXXIALALKQAIRLTRT------------SAYTPAVAHVNRSCLRLVMXXX 112
           VY          IALALK  I  ++             + +  + A +N   LRL     
Sbjct: 62  VYSFSSFLFSSLIALALKNIINFSKDIKDGDVVLDNNNNNWVHSAAKINTVVLRLGTLVS 121

Query: 113 XXXXXXXCLFLMLALVNVVQIKLGTLACGSSHAFAAIVPLFIFVPIALLIYVSVVFYAFT 172
                  C FL++ALV++VQIKLGTLACGS H FAA+ PL + VP ALLIYV +V Y+FT
Sbjct: 122 AFGSVFGCGFLVMALVDLVQIKLGTLACGSPHTFAAVAPLLVLVPTALLIYVVLVLYSFT 181

Query: 173 R 173
           R
Sbjct: 182 R 182


>Glyma11g14340.1 
          Length = 190

 Score =  135 bits (339), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 100/178 (56%), Gaps = 12/178 (6%)

Query: 8   TSVHITALDAIVNVNSLFTLAVFIGLTWNPHDPENNLNSDPACAPTAAIAENLVAFHVYX 67
           T +HI ALD IVNVNSLFTLA+F+G+T            D ACA   +++E L+AFHVY 
Sbjct: 13  TRIHIMALDGIVNVNSLFTLALFLGITTTSTTNTLIGEDDAACAAGTSMSEGLIAFHVYS 72

Query: 68  XXXXXXXXXIALALKQAIRLTR------------TSAYTPAVAHVNRSCLRLVMXXXXXX 115
                    IALALK  I  ++             + +  +VA +N   LR         
Sbjct: 73  FSSFLFSSLIALALKNVINFSKDVHEGDAVLDNNNNNWIHSVAKINTVVLRFGTLVSAFG 132

Query: 116 XXXXCLFLMLALVNVVQIKLGTLACGSSHAFAAIVPLFIFVPIALLIYVSVVFYAFTR 173
               C FL++ALV++VQIKLGT  CGS H FAA+ PL + VP ALLIYV +V YAFTR
Sbjct: 133 SVFGCGFLVMALVDLVQIKLGTFTCGSPHTFAAVAPLLVLVPTALLIYVVLVIYAFTR 190


>Glyma08g45700.1 
          Length = 194

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 2/161 (1%)

Query: 14  ALDAIVNVNSLFTLAVFIGLTWNPHDPENNLNSDPACAPTAAIAENLVAFHVYXXXXXXX 73
           ALD +VNVNSLFT+AVF+GL+      + +L +  +C     +A+ L+ F V        
Sbjct: 35  ALDGLVNVNSLFTIAVFVGLSLTTP-GQRSLENRSSCDAGVDVAKKLLVFEVVSFSFFLF 93

Query: 74  XXXIALALKQAIRLTRTSAYTPAV-AHVNRSCLRLVMXXXXXXXXXXCLFLMLALVNVVQ 132
              +A  LK A+ L  +     A  AH+N   LRL M          CLFL+L++VNV++
Sbjct: 94  SSLVAQGLKLALNLLNSKDADEAFRAHINLKALRLGMLGSAIGSVMGCLFLVLSMVNVIE 153

Query: 133 IKLGTLACGSSHAFAAIVPLFIFVPIALLIYVSVVFYAFTR 173
           I+LG L+CGS  A  A+  + + V  AL++Y+S   YAFTR
Sbjct: 154 IRLGMLSCGSKAAAHAVATMVVLVSSALVLYISTAIYAFTR 194


>Glyma18g24530.1 
          Length = 196

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 89/160 (55%), Gaps = 2/160 (1%)

Query: 14  ALDAIVNVNSLFTLAVFIGLTWNPHDPENNLNSDPACAPTAAIAENLVAFHVYXXXXXXX 73
           ALD +VNVNSLFT+AVF+GL+      + +L +  +C     +A+ L+ F V        
Sbjct: 37  ALDGLVNVNSLFTIAVFVGLSLTTP-GQRSLENRSSCDADVDVAKKLLVFEVVSFSFFLF 95

Query: 74  XXXIALALKQAIRLTRTSAYTPAV-AHVNRSCLRLVMXXXXXXXXXXCLFLMLALVNVVQ 132
              +A  LK A+ L  +     A  AH+N   LRL M          CLFL+L++VNV++
Sbjct: 96  SSLVAQGLKLALNLLNSKDADEAFRAHINLRALRLGMLGSAIGSVMGCLFLVLSMVNVIE 155

Query: 133 IKLGTLACGSSHAFAAIVPLFIFVPIALLIYVSVVFYAFT 172
           I+LG L+CGS  A  A+  + + V  AL++Y+S   YAFT
Sbjct: 156 IRLGMLSCGSKAAAHAVAAMVVLVSSALVLYISTAIYAFT 195


>Glyma11g34680.1 
          Length = 61

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/54 (75%), Positives = 45/54 (83%)

Query: 120 CLFLMLALVNVVQIKLGTLACGSSHAFAAIVPLFIFVPIALLIYVSVVFYAFTR 173
           C FLMLALVNV QIKL TL CGSSH +AA++PL IFVP+ALLIY S V YAFTR
Sbjct: 8   CGFLMLALVNVAQIKLETLVCGSSHTYAAVIPLLIFVPLALLIYFSFVLYAFTR 61


>Glyma12g06270.1 
          Length = 130

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 20/133 (15%)

Query: 14  ALDAIVNVNSLFTLAVFIGL--TWNPHDPENNLNSDPACAPTAAIAENLVAFHVYXXXXX 71
           AL+ IVNVNSLFTLA+F+G+  T N    ++N     ACA  A+I++  +  HVY     
Sbjct: 2   ALEGIVNVNSLFTLALFLGIITTTNTLIRDDN----AACAAGASISKGFIELHVYSFSSF 57

Query: 72  XXXXXIALALKQAIRLTRT--------------SAYTPAVAHVNRSCLRLVMXXXXXXXX 117
                IALALK  +  ++               + +  +VA +N   LRL          
Sbjct: 58  LFSSLIALALKNIMNFSKDVDNGEIVLDNNNNNNNWVHSVAKINTVVLRLGTLVLAFGSV 117

Query: 118 XXCLFLMLALVNV 130
             C FL++ALV++
Sbjct: 118 FRCGFLVIALVDL 130