Miyakogusa Predicted Gene

Lj2g3v2674940.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2674940.1 tr|B9GGL3|B9GGL3_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_171742
PE=4,47.33,9e-18,seg,NULL,CUFF.39193.1
         (523 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW598043 similar to UniRef100_A7QYK0 Cluster: Chromosom...    60   1e-08

>gnl|LJGI|BW598043 similar to UniRef100_A7QYK0 Cluster: Chromosome undetermined
           scaffold_248, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_248,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (59%)
          Length = 486

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 25  agcgtgcacatcacggcgctagacgcgatcgtgaacgtgaactccctcttcaccctcgcc 84
           ||||| ||| |||||||||| ||||   | || ||||| ||||||||||||||| |||||
Sbjct: 146 agcgttcacgtcacggcgctcgacggcctagtcaacgtcaactccctcttcaccatcgcc 205

                         
Query: 85  gtcttcatcggcct 98
           |||||| |||||||
Sbjct: 206 gtcttcgtcggcct 219