Miyakogusa Predicted Gene

Lj2g3v2560090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2560090.1 Non Chatacterized Hit- tr|D7LCE2|D7LCE2_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,37.42,5e-18,DUF2359,Protein of unknown function DUF2359,
TMEM214; UNCHARACTERIZED,Protein of unknown function DU,CUFF.39101.1
         (546 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23170.2 | Symbols:  | Protein of unknown function DUF2359, t...   480   e-135
AT1G70770.2 | Symbols:  | Protein of unknown function DUF2359, t...   473   e-133
AT1G70770.1 | Symbols:  | Protein of unknown function DUF2359, t...   473   e-133
AT1G23170.1 | Symbols:  | Protein of unknown function DUF2359, t...   406   e-113
AT3G11880.1 | Symbols:  | Protein of unknown function DUF2359, t...   296   2e-80

>AT1G23170.2 | Symbols:  | Protein of unknown function DUF2359,
           transmembrane | chr1:8212724-8215516 FORWARD LENGTH=615
          Length = 615

 Score =  480 bits (1235), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/413 (59%), Positives = 310/413 (75%), Gaps = 6/413 (1%)

Query: 104 LNADDLEAFLAEITASYDTQQDIQLMRFADYFGRAFSSVGGAQFPWLKTFKESTVAKMVD 163
           ++  +L AFL E + SY +Q +IQLM+FADYFGR+ S V  A FPW+KTFKES ++K++D
Sbjct: 156 IDVSNLAAFLVEASESYASQPEIQLMKFADYFGRSLSQVSSAHFPWVKTFKESPLSKLID 215

Query: 164 VPLSNISEPIYKISTDWISHRSPEALGSFVLWSLDSILADLASHQGVVKGSKKGVQQPSS 223
           +PLS+I E +YK S DWI+ R  EALG+FVLW LD ILADLA  QG VKG KKG QQ SS
Sbjct: 216 IPLSHIPEAVYKTSADWINQRPIEALGAFVLWGLDCILADLAVQQGGVKGGKKGAQQASS 275

Query: 224 KSQVAIFMVLAMVLRRKPDVMISLLPTMKESQKYQGQDKLPVTVWVIAQASQGDLVMXXX 283
           KSQVAIF+ +AMVLR+KPD + ++LPT++E+ KYQGQDKLPVTVW++AQASQGD+ +   
Sbjct: 276 KSQVAIFVAVAMVLRKKPDALTNILPTLRENPKYQGQDKLPVTVWMMAQASQGDISV-GL 334

Query: 284 XXXXXXXXXXXXXXXXXPQSRDLILQMVERIIASPKARTILLNGAVRKGERVVPPLALDS 343
                            PQSRDLILQ+VERI+++PKARTIL+NGAVRKGER++PP + + 
Sbjct: 335 YSWAHNLLPVVSSKSCNPQSRDLILQLVERILSNPKARTILVNGAVRKGERLIPPPSFEI 394

Query: 344 LLRVTFPLPSARVKATERLAAVYPTLKEVSLAGSPGSKAIKHLAQQILSFAIKAAGEANP 403
           L+R+TFP  SARVKATER  A+YP LKEVSLAG+PGSKA+K + QQI +FA+KAAGE NP
Sbjct: 395 LVRLTFPASSARVKATERFEAIYPLLKEVSLAGAPGSKAMKQVTQQIFTFALKAAGEENP 454

Query: 404 DLSKEASDIFIWCLTQNPECYKQWDLLYMDNLEASIAVLRKLSDEWKEH---LDKHPTLD 460
            L+KEA+ I IW LTQN +C K W+ LY DNL+AS+AVL+KL  EWKE    L    TL 
Sbjct: 455 LLAKEAAAITIWALTQNVDCCKHWENLYTDNLKASVAVLKKLIGEWKERSVKLTPAETLT 514

Query: 461 PFREALKSFHQKNENALTKVDDGARHGLLKDSDKYCKVILGRLSRGNGCMKSM 513
              + +KS  QKNE ALT+  +G    L KD+DKYCKVI G+LS G GC+KS+
Sbjct: 515 -LNQTMKSLRQKNEEALTEGGNGVSQSLYKDADKYCKVIAGKLSSG-GCIKSI 565


>AT1G70770.2 | Symbols:  | Protein of unknown function DUF2359,
           transmembrane | chr1:26688622-26691185 REVERSE
           LENGTH=610
          Length = 610

 Score =  473 bits (1217), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/420 (59%), Positives = 310/420 (73%), Gaps = 13/420 (3%)

Query: 108 DLEAFLAEITASYDTQQDIQLMRFADYFGRAFSSVGGAQFPWLKTFKESTVAKMVDVPLS 167
           +LEAFL E + SY +Q +IQLMRFADYFGRA S V   QFPW+K FKES ++K+++VPL+
Sbjct: 150 NLEAFLVEASESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVPLA 209

Query: 168 NISEPIYKISTDWISHRSPEALGSFVLWSLDSILADLASHQGVVKGSKKGVQQPSSKSQV 227
           +I EP+YK S DWI+HR  EALG+FVLW+ D IL DLA+ QG  KG KKG QQ +SKSQV
Sbjct: 210 HIPEPVYKTSVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQTTSKSQV 269

Query: 228 AIFMVLAMVLRRKPDVMISLLPTMKESQKYQGQDKLPVTVWVIAQASQGDLVMXXXXXXX 287
           AIF+ LAMVLRRKPD + ++LPT++E+ KYQGQDKLPVTVW++AQASQGD+ +       
Sbjct: 270 AIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQASQGDIAV-GLYSWA 328

Query: 288 XXXXXXXXXXXXXPQSRDLILQMVERIIASPKARTILLNGAVRKGERVVPPLALDSLLRV 347
                        PQSRDLILQ+VE+I+ +PKARTIL+NGAVRKGER++PP + + LLR+
Sbjct: 329 HNLLPVVGNKNCNPQSRDLILQLVEKILTNPKARTILVNGAVRKGERLIPPPSFEILLRL 388

Query: 348 TFPLPSARVKATERLAAVYPTLKEVSLAGSPGSKAIKHLAQQILSFAIKAAGEANPDLSK 407
           TFP  SARVKATER  A+YP LKEV+LAG+PGSKA+K + QQI +FA+K AGE NP L+K
Sbjct: 389 TFPASSARVKATERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGEGNPVLAK 448

Query: 408 EASDIFIWCLTQNPECYKQWDLLYMDNLEASIAVLRKLSDEWKEH---LDKHP----TLD 460
           EA+ I IW +TQN +C K WD LY +NLEAS+AVL+KL +EWKEH   L   P    TL+
Sbjct: 449 EATAIAIWSVTQNFDCCKHWDNLYKENLEASVAVLKKLVEEWKEHSVKLSSSPNDALTLN 508

Query: 461 PFREALKSFHQKNENALTKVDDGARHGLLKDSDKYCKVILGRLSRGNGCMKSMAFVSVVL 520
                +KSF  KNE  +T  + GA   L K++DK CK I GRLSRG+GC+K  A   V L
Sbjct: 509 ---RTMKSFRLKNEEVIT--EGGANASLYKEADKSCKTISGRLSRGSGCLKGTAITLVFL 563


>AT1G70770.1 | Symbols:  | Protein of unknown function DUF2359,
           transmembrane | chr1:26688622-26691185 REVERSE
           LENGTH=610
          Length = 610

 Score =  473 bits (1217), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/420 (59%), Positives = 310/420 (73%), Gaps = 13/420 (3%)

Query: 108 DLEAFLAEITASYDTQQDIQLMRFADYFGRAFSSVGGAQFPWLKTFKESTVAKMVDVPLS 167
           +LEAFL E + SY +Q +IQLMRFADYFGRA S V   QFPW+K FKES ++K+++VPL+
Sbjct: 150 NLEAFLVEASESYASQPEIQLMRFADYFGRALSGVSSVQFPWVKMFKESPLSKLIEVPLA 209

Query: 168 NISEPIYKISTDWISHRSPEALGSFVLWSLDSILADLASHQGVVKGSKKGVQQPSSKSQV 227
           +I EP+YK S DWI+HR  EALG+FVLW+ D IL DLA+ QG  KG KKG QQ +SKSQV
Sbjct: 210 HIPEPVYKTSVDWINHRPIEALGAFVLWAFDCILTDLAAQQGGAKGGKKGGQQTTSKSQV 269

Query: 228 AIFMVLAMVLRRKPDVMISLLPTMKESQKYQGQDKLPVTVWVIAQASQGDLVMXXXXXXX 287
           AIF+ LAMVLRRKPD + ++LPT++E+ KYQGQDKLPVTVW++AQASQGD+ +       
Sbjct: 270 AIFVALAMVLRRKPDALTNVLPTLRENPKYQGQDKLPVTVWMMAQASQGDIAV-GLYSWA 328

Query: 288 XXXXXXXXXXXXXPQSRDLILQMVERIIASPKARTILLNGAVRKGERVVPPLALDSLLRV 347
                        PQSRDLILQ+VE+I+ +PKARTIL+NGAVRKGER++PP + + LLR+
Sbjct: 329 HNLLPVVGNKNCNPQSRDLILQLVEKILTNPKARTILVNGAVRKGERLIPPPSFEILLRL 388

Query: 348 TFPLPSARVKATERLAAVYPTLKEVSLAGSPGSKAIKHLAQQILSFAIKAAGEANPDLSK 407
           TFP  SARVKATER  A+YP LKEV+LAG+PGSKA+K + QQI +FA+K AGE NP L+K
Sbjct: 389 TFPASSARVKATERFEAIYPLLKEVALAGAPGSKAMKQVTQQIFTFALKLAGEGNPVLAK 448

Query: 408 EASDIFIWCLTQNPECYKQWDLLYMDNLEASIAVLRKLSDEWKEH---LDKHP----TLD 460
           EA+ I IW +TQN +C K WD LY +NLEAS+AVL+KL +EWKEH   L   P    TL+
Sbjct: 449 EATAIAIWSVTQNFDCCKHWDNLYKENLEASVAVLKKLVEEWKEHSVKLSSSPNDALTLN 508

Query: 461 PFREALKSFHQKNENALTKVDDGARHGLLKDSDKYCKVILGRLSRGNGCMKSMAFVSVVL 520
                +KSF  KNE  +T  + GA   L K++DK CK I GRLSRG+GC+K  A   V L
Sbjct: 509 ---RTMKSFRLKNEEVIT--EGGANASLYKEADKSCKTISGRLSRGSGCLKGTAITLVFL 563


>AT1G23170.1 | Symbols:  | Protein of unknown function DUF2359,
           transmembrane | chr1:8212724-8215516 FORWARD LENGTH=569
          Length = 569

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 214/353 (60%), Positives = 264/353 (74%), Gaps = 6/353 (1%)

Query: 164 VPLSNISEPIYKISTDWISHRSPEALGSFVLWSLDSILADLASHQGVVKGSKKGVQQPSS 223
           +PLS+I E +YK S DWI+ R  EALG+FVLW LD ILADLA  QG VKG KKG QQ SS
Sbjct: 170 IPLSHIPEAVYKTSADWINQRPIEALGAFVLWGLDCILADLAVQQGGVKGGKKGAQQASS 229

Query: 224 KSQVAIFMVLAMVLRRKPDVMISLLPTMKESQKYQGQDKLPVTVWVIAQASQGDLVMXXX 283
           KSQVAIF+ +AMVLR+KPD + ++LPT++E+ KYQGQDKLPVTVW++AQASQGD+ +   
Sbjct: 230 KSQVAIFVAVAMVLRKKPDALTNILPTLRENPKYQGQDKLPVTVWMMAQASQGDISVGLY 289

Query: 284 XXXXXXXXXXXXXXXXXPQSRDLILQMVERIIASPKARTILLNGAVRKGERVVPPLALDS 343
                            PQSRDLILQ+VERI+++PKARTIL+NGAVRKGER++PP + + 
Sbjct: 290 SWAHNLLPVVSSKSCN-PQSRDLILQLVERILSNPKARTILVNGAVRKGERLIPPPSFEI 348

Query: 344 LLRVTFPLPSARVKATERLAAVYPTLKEVSLAGSPGSKAIKHLAQQILSFAIKAAGEANP 403
           L+R+TFP  SARVKATER  A+YP LKEVSLAG+PGSKA+K + QQI +FA+KAAGE NP
Sbjct: 349 LVRLTFPASSARVKATERFEAIYPLLKEVSLAGAPGSKAMKQVTQQIFTFALKAAGEENP 408

Query: 404 DLSKEASDIFIWCLTQNPECYKQWDLLYMDNLEASIAVLRKLSDEWKEH---LDKHPTLD 460
            L+KEA+ I IW LTQN +C K W+ LY DNL+AS+AVL+KL  EWKE    L    TL 
Sbjct: 409 LLAKEAAAITIWALTQNVDCCKHWENLYTDNLKASVAVLKKLIGEWKERSVKLTPAETLT 468

Query: 461 PFREALKSFHQKNENALTKVDDGARHGLLKDSDKYCKVILGRLSRGNGCMKSM 513
              + +KS  QKNE ALT+  +G    L KD+DKYCKVI G+LS G GC+KS+
Sbjct: 469 -LNQTMKSLRQKNEEALTEGGNGVSQSLYKDADKYCKVIAGKLSSG-GCIKSI 519


>AT3G11880.1 | Symbols:  | Protein of unknown function DUF2359,
           transmembrane | chr3:3751697-3753722 FORWARD LENGTH=443
          Length = 443

 Score =  296 bits (759), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 176/423 (41%), Positives = 251/423 (59%), Gaps = 23/423 (5%)

Query: 107 DDLEAFLAEITASYDTQQDIQLMRFADYFGRAFSSVGGAQFPWLKTFKESTVAK---MVD 163
           DDL A L +I+ S+    + QL++F DY     SSV   Q+ WL  FK S   K   M+D
Sbjct: 18  DDLAASLVKISKSHAFVPEEQLLKFVDYLEIKLSSV---QYLWLDMFKGSPCPKLIDMID 74

Query: 164 VPLSNISEPIYKISTDWISHRSPEALGSFVLWSLDSILADLASHQGVVKGSKKGVQQPSS 223
           VPLS+I   +Y  S +W+   S   L +FV+WSL+ +L  L   Q   +G  +  ++ +S
Sbjct: 75  VPLSHIPVSVYDTSVEWLDKFSIGLLCAFVVWSLNRLLTILEPPQ---QGGHQ--RRTTS 129

Query: 224 KSQVAIFMVLAMVLRRKPDVMISLLPTMKESQKYQGQDKLPVTVWVIAQASQGDLVM--- 280
           K  VA+F+ LAMVLR +P+ ++ +LPT+KE + YQG DKLP+ VW++AQASQGDL +   
Sbjct: 130 KFHVAVFVALAMVLRNEPNTLVIVLPTLKEDE-YQGHDKLPILVWMMAQASQGDLSVGLY 188

Query: 281 --XXXXXXXXXXXXXXXXXXXXPQSRDLILQMVERIIASPKARTILLNGAVRKGERVVPP 338
                                  QS DLILQ+ E I+++  ARTIL+NG V   +R++ P
Sbjct: 189 SWSCNLLPVFYQENLLPVSRSNSQSMDLILQLAEMILSNLDARTILVNGTVIDKQRLISP 248

Query: 339 LALDSLLRVTFPLPSARVKATERLAAVYPTLKEVSLAGSPGSKAIKHLAQQILSFAIKAA 398
            A + L+R+TFP  S RVKATER  A+YP LKEV+LA  PGS+ +K + QQI  +++  A
Sbjct: 249 YAFELLMRLTFPASSERVKATERFEAIYPLLKEVALACEPGSELMKQVTQQIFHYSLIIA 308

Query: 399 GEANPDLSKEASDIFIWCLTQNPECYKQWDLLYMDNLEASIAVLRKLSDEWKE---HLDK 455
           G  N  L+KEA+ I +W LT+N +C KQW+ LY +N EAS+AVL+KL DE  +    L  
Sbjct: 309 GRRNLVLAKEATAIAVWSLTENVDCCKQWEKLYWENKEASVAVLKKLVDERGDISIKLAS 368

Query: 456 HPTLD-PFREALKSFHQKNENALTKVDDGARHGLLKDSDKYCKVILGRLSRGNGCMKSMA 514
            P+      + ++S   KNE A+T  + G      K++DK CKV+ GR    N C+K  A
Sbjct: 369 SPSHKFTLNQTMESIRLKNEKAIT--EGGTIGSRYKEADKSCKVMSGRFFPENACLKGTA 426

Query: 515 FVS 517
            ++
Sbjct: 427 IIT 429