Miyakogusa Predicted Gene

Lj2g3v2339470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2339470.1 Non Chatacterized Hit- tr|B9SZ25|B9SZ25_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,52.58,8e-16,coiled-coil,NULL; seg,NULL,CUFF.38864.1
         (97 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g37700.1                                                       112   6e-26
Glyma02g39650.1                                                       112   8e-26
Glyma08g15820.1                                                        53   9e-08
Glyma15g42410.1                                                        51   3e-07

>Glyma14g37700.1 
          Length = 284

 Score =  112 bits (281), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 61/97 (62%), Gaps = 2/97 (2%)

Query: 1   MDNNIIIMTCEVEKLXXXXXXXXXXXXXXXXXXXXXNPSPGYPANYDNPEMGYGGITYPP 60
           MDNN+IIM  EVEKL                     NP  GYPANYDNPEMGYGGIT PP
Sbjct: 190 MDNNMIIMDREVEKLRADLANAEKRARAVMAADAKTNP--GYPANYDNPEMGYGGITCPP 247

Query: 61  GSYGMHQIQAGVDAHPQYAYGATLHHPYDLQHTQGPR 97
            SY MHQ+QA VD H  +  GA+LH+P DLQHTQ PR
Sbjct: 248 DSYSMHQLQAVVDTHSPHEAGASLHYPNDLQHTQVPR 284


>Glyma02g39650.1 
          Length = 296

 Score =  112 bits (280), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 59/97 (60%), Gaps = 2/97 (2%)

Query: 1   MDNNIIIMTCEVEKLXXXXXXXXXXXXXXXXXXXXXNPSPGYPANYDNPEMGYGGITYPP 60
           MDNN+IIM  EVEKL                      PSPGYPANYDNPEMGYGG T PP
Sbjct: 189 MDNNMIIMDHEVEKLRAELANEEKRARAAMAADT--KPSPGYPANYDNPEMGYGGTTCPP 246

Query: 61  GSYGMHQIQAGVDAHPQYAYGATLHHPYDLQHTQGPR 97
            SY  HQ+QA VD H  +  GA LHHP DLQHTQ PR
Sbjct: 247 DSYSTHQMQAVVDTHSPHEAGAPLHHPNDLQHTQVPR 283


>Glyma08g15820.1 
          Length = 329

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 1   MDNNIIIMTCEVEKLXXXXXXXXXXXXXXXXXXXXXNPSPGYPANYDNPEMGYGGITYPP 60
           M+  ++ M  E+EKL                     NP  GY ANY   ++GY G  YP 
Sbjct: 237 MEKKLVAMAREMEKLRAEIANAEKRARAAAAAG---NPGQGYNANYGTADVGYAGNPYP- 292

Query: 61  GSYGMHQIQAGVDAHPQYAYGATLHHPYDLQHTQGPR 97
           G YGM+ +Q GV+  PQY  G      YD+Q  QG R
Sbjct: 293 GIYGMNPVQPGVENFPQYGPGPAAWGAYDMQRVQGHR 329


>Glyma15g42410.1 
          Length = 306

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 4/97 (4%)

Query: 1   MDNNIIIMTCEVEKLXXXXXXXXXXXXXXXXXXXXXNPSPGYPANYDNPEMGYGGITYPP 60
           M+  ++ M  E+EKL                     NP  GY ANY N + GY G  YP 
Sbjct: 214 MEKKLVAMAREMEKLRAEIANAEKRARAAVAAG---NPGQGYNANYGNADAGYAGNPYP- 269

Query: 61  GSYGMHQIQAGVDAHPQYAYGATLHHPYDLQHTQGPR 97
             YGM+ +Q GV+  P Y  G      YD+Q  QG R
Sbjct: 270 SIYGMNPVQPGVENFPHYGPGPAAWGAYDMQRAQGHR 306