Miyakogusa Predicted Gene

Lj2g3v2339470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2339470.1 Non Characterized Hit- tr|B9SZ25|B9SZ25_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,52.58,8e-16,coiled-coil,NULL; seg,NULL,CUFF.38864.1
         (97 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g072760.1 | myosin-like protein | HC | chr5:30972383-30977...   113   4e-26
Medtr5g072760.2 | myosin-like protein | HC | chr5:30972421-30977...    66   7e-12

>Medtr5g072760.1 | myosin-like protein | HC | chr5:30972383-30977145
           | 20130731
          Length = 286

 Score =  113 bits (282), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 62/97 (63%), Gaps = 4/97 (4%)

Query: 1   MDNNIIIMTCEVEKLXXXXXXXXXXXXXXXXXXXXXNPSPGYPANYDNPEMGYGGITYPP 60
           MD N+IIMT EVEKL                      PSPGY AN  NPEMG+GGITYP 
Sbjct: 194 MDTNMIIMTREVEKLRAELANAEKRARAAMVAAAI--PSPGYHAN--NPEMGFGGITYPQ 249

Query: 61  GSYGMHQIQAGVDAHPQYAYGATLHHPYDLQHTQGPR 97
            SY MHQIQ GV+ HPQY YGATLHHPYDLQ +Q PR
Sbjct: 250 DSYSMHQIQGGVEVHPQYGYGATLHHPYDLQQSQVPR 286


>Medtr5g072760.2 | myosin-like protein | HC | chr5:30972421-30977097
           | 20130731
          Length = 280

 Score = 65.9 bits (159), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 1   MDNNIIIMTCEVEKLXXXXXXXXXXXXXXXXXXXXXNPSPGYPANYDNPEMGYGGITYPP 60
           MD N+IIMT EVEKL                      PSPGY AN  NPEMG+GGITYP 
Sbjct: 194 MDTNMIIMTREVEKLRAELANAEKRARAAMVAAAI--PSPGYHAN--NPEMGFGGITYPQ 249

Query: 61  GSYGMHQIQ 69
            SY MHQ++
Sbjct: 250 DSYSMHQVK 258