Miyakogusa Predicted Gene

Lj2g3v2339470.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2339470.1 Non Chatacterized Hit- tr|B9SZ25|B9SZ25_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,52.58,8e-16,coiled-coil,NULL; seg,NULL,CUFF.38864.1
         (294 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP048547 similar to UniRef100_A7NY95 Cluster: Chromosom...   583   e-166
gnl|LJGI|BP049328 similar to UniRef100_A7NY95 Cluster: Chromosom...   509   e-144

>gnl|LJGI|BP048547 similar to UniRef100_A7NY95 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 529

 Score =  583 bits (294), Expect = e-166
 Identities = 294/294 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggacaacaatataatcatcatgacctgtgaggttgaaaaattacgtgctgagttggct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atggacaacaatataatcatcatgacctgtgaggttgaaaaattacgtgctgagttggct 445

                                                                       
Query: 61  gacgcagagaagagggcaagagctgcaattgcagttgctgcagctgcaaatccaagtcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gacgcagagaagagggcaagagctgcaattgcagttgctgcagctgcaaatccaagtcct 385

                                                                       
Query: 121 ggatatcctgcaaactatgacaatcctgagatgggatatggaggaatcacataccctcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggatatcctgcaaactatgacaatcctgagatgggatatggaggaatcacataccctcct 325

                                                                       
Query: 181 ggttcttatggcatgcatcagatccaagctggggttgatgctcaccctcagtatgcatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggttcttatggcatgcatcagatccaagctggggttgatgctcaccctcagtatgcatat 265

                                                                 
Query: 241 ggagcaacattacatcatccttatgacctacaacatacacaagggcctagatag 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggagcaacattacatcatccttatgacctacaacatacacaagggcctagatag 211


>gnl|LJGI|BP049328 similar to UniRef100_A7NY95 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 548

 Score =  509 bits (257), Expect = e-144
 Identities = 293/308 (95%), Gaps = 14/308 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggacaacaatataatcatcatgacctgtgaggttgaaaaattacgtgctgagttggct 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atggacaacaaaataatcatcatgacctgtgaggttgaaaaattacgtgctgagttggct 457

                                                                       
Query: 61  gacgcagagaagagggcaagagctgcaattgcagttgctgcagctgcaaatccaa----- 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 456 gacgcagagaagagggcaagagctgcaattgcagttgctgcagctgcaaatccaattgtt 397

                                                                       
Query: 116 ---------gtcctggatatcctgcaaactatgacaatcctgagatgggatatggaggaa 166
                    |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tctatgtaggtcctggatatcctgcaaactatgacaatcctgagatgggatatggaggaa 337

                                                                       
Query: 167 tcacataccctcctggttcttatggcatgcatcagatccaagctggggttgatgctcacc 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tcacataccctcctggttcttatggcatgcatcagatccaagctggggttgatgctcacc 277

                                                                       
Query: 227 ctcagtatgcatatggagcaacattacatcatccttatgacctacaacatacacaagggc 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctcagtatgcatatggagcaacattacatcatccttatgacctacaacatacacaagggc 217

                   
Query: 287 ctagatag 294
           ||||||||
Sbjct: 216 ctagatag 209