Miyakogusa Predicted Gene

Lj2g3v2245130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2245130.1 tr|B9GIU2|B9GIU2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_549087 PE=4
SV=1,42.72,0.00000004,seg,NULL,CUFF.38755.1
         (131 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g39060.1                                                       104   2e-23
Glyma14g37110.1                                                       103   7e-23
Glyma11g26480.1                                                        92   2e-19
Glyma18g07300.1                                                        74   4e-14
Glyma03g14190.1                                                        47   6e-06

>Glyma02g39060.1 
          Length = 313

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/76 (65%), Positives = 57/76 (75%)

Query: 26  NRHVRSCIFRIPWQSEFSPVELMKDLAERVTNALRLVSLKRPLHRDTXXXXXXXXXXXXX 85
           N  V+SC+FRIPWQSE SP+EL+KDLAERVTNALRL+S KR LHR +             
Sbjct: 217 NGQVKSCMFRIPWQSETSPIELVKDLAERVTNALRLISPKRFLHRGSSSLTRSKSAGSSV 276

Query: 86  DSYRTAAVEDCIEFIH 101
           DS+RTAAVEDCIEFIH
Sbjct: 277 DSHRTAAVEDCIEFIH 292


>Glyma14g37110.1 
          Length = 332

 Score =  103 bits (256), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 58/77 (75%)

Query: 25  RNRHVRSCIFRIPWQSEFSPVELMKDLAERVTNALRLVSLKRPLHRDTXXXXXXXXXXXX 84
           +N  V+SC+FRIPWQSE SP+EL+KDLAERVTNALRL+S KR LH+ +            
Sbjct: 235 KNGQVKSCMFRIPWQSESSPIELVKDLAERVTNALRLISPKRSLHQGSSSLSRSKSTGSS 294

Query: 85  XDSYRTAAVEDCIEFIH 101
            DS+RTAAVEDCIEFIH
Sbjct: 295 IDSHRTAAVEDCIEFIH 311


>Glyma11g26480.1 
          Length = 99

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 10/101 (9%)

Query: 1   MSHKGHFNEKASLSWRQNSSRKSARNRHVRSCIFRIPWQSEFSPVELMKDLAERVTNALR 60
           MSH G F EK +L           R ++ RSC FR+PWQSEFSP+E +KD+A++VT A+ 
Sbjct: 1   MSHIGCFFEKTNL----------PRKKNTRSCKFRLPWQSEFSPIEFLKDVADKVTKAIC 50

Query: 61  LVSLKRPLHRDTXXXXXXXXXXXXXDSYRTAAVEDCIEFIH 101
           L S ++  +R               D YRTAAVEDCIEFIH
Sbjct: 51  LRSARKSSNRGPSCMGRSKPIGVSVDYYRTAAVEDCIEFIH 91


>Glyma18g07300.1 
          Length = 111

 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 53/72 (73%), Gaps = 1/72 (1%)

Query: 1  MSHKGHFNEKASLSWRQNSSRKSARNRHVRSCIFRIPWQSEFSPVELMKDLAERVTNALR 60
          MS+ G F EK SL W++N+ R+S+RN+  RSC FR+PW SE SP+E +KD+A++VT A+ 
Sbjct: 1  MSNTGCFFEKTSLPWKKNT-RRSSRNKLGRSCKFRLPWWSELSPIEFLKDIADKVTKAIC 59

Query: 61 LVSLKRPLHRDT 72
          L S ++  +R +
Sbjct: 60 LRSARKSSNRGS 71


>Glyma03g14190.1 
          Length = 128

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 7   FNEKASLSWRQNSSRKSARNRHVRSC-IFRIPWQSEFSPVELMKDLAERVTNALRLVSLK 65
           FNEK  +  +Q S       + V     FR P   +FSPV  ++ L  +V +A+R+VS++
Sbjct: 15  FNEKPIMFLKQTSVGGGGNKKRVTGTWTFRFPKDPKFSPVRFLQQLGAKVASAIRVVSMR 74

Query: 66  RPLHRDTXXXXXXXXXXXX--XDSYRTAAVEDCIEFIH 101
           R   R                 DS+R  AVEDCIEF+H
Sbjct: 75  RRSSRKVSSSSLVRTRSVSDPPDSHRAKAVEDCIEFLH 112