Miyakogusa Predicted Gene

Lj2g3v2245110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2245110.1 tr|G7K6B3|G7K6B3_MEDTR Josephin-like protein
OS=Medicago truncatula GN=MTR_5g069880 PE=4
SV=1,78.92,0,JOSEPHIN,Machado-Joseph disease protein MJD; SUBFAMILY
NOT NAMED,NULL; JOSEPHIN 1, 2,NULL; Josephin,,CUFF.38754.1
         (183 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g39060.1                                                       307   4e-84
Glyma14g37110.1                                                       306   1e-83
Glyma01g27200.1                                                        60   1e-09
Glyma03g14740.1                                                        57   1e-08

>Glyma02g39060.1 
          Length = 313

 Score =  307 bits (787), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 143/173 (82%), Positives = 155/173 (89%)

Query: 1   MATGNSHVYHERQRLQFCLLHSLNSLFQQKDAFTRTTLNAISERLALDESSNETWTPLPF 60
           MAT NS VYHERQRLQFCL+H+LNSLFQQKDAFTR  LNAISERL L++S++ETWTPL  
Sbjct: 1   MATENSQVYHERQRLQFCLVHALNSLFQQKDAFTRAKLNAISERLTLEDSNSETWTPLSV 60

Query: 61  LFKPHHNALTGNYDINVLIAALEEKGKSVVWHDRRNGASSIDLDAPEDVLMGIVINVLVT 120
           LFKPHHN LTGNYDINVLIAALEEKGK+VVWHDRR GASSID+DAPEDVLMG VINV VT
Sbjct: 61  LFKPHHNVLTGNYDINVLIAALEEKGKTVVWHDRRKGASSIDVDAPEDVLMGFVINVAVT 120

Query: 121 RFAGIWKGRHWITLRKIDGVWYNLDSDLAAPKAFCDKEKVREFLDFTIAHGGE 173
           RFAGIW+ RHWI LRKIDGVWYNLDSDL AP+ F D +KVREFLD T+AHGGE
Sbjct: 121 RFAGIWRSRHWIALRKIDGVWYNLDSDLTAPQPFFDTDKVREFLDSTLAHGGE 173


>Glyma14g37110.1 
          Length = 332

 Score =  306 bits (783), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 143/176 (81%), Positives = 156/176 (88%)

Query: 1   MATGNSHVYHERQRLQFCLLHSLNSLFQQKDAFTRTTLNAISERLALDESSNETWTPLPF 60
           MAT NS VYHERQRLQFCL+HSLNSLFQQKDAFTR  LNAISERLAL++S++ETWTPL  
Sbjct: 1   MATENSQVYHERQRLQFCLVHSLNSLFQQKDAFTRAKLNAISERLALEDSNSETWTPLSV 60

Query: 61  LFKPHHNALTGNYDINVLIAALEEKGKSVVWHDRRNGASSIDLDAPEDVLMGIVINVLVT 120
           LFKPHHN LTGNYDINVLIAALEEKGKSV+WHD R GASSID+DAPEDVLMG+VINV + 
Sbjct: 61  LFKPHHNVLTGNYDINVLIAALEEKGKSVLWHDHRKGASSIDVDAPEDVLMGVVINVALK 120

Query: 121 RFAGIWKGRHWITLRKIDGVWYNLDSDLAAPKAFCDKEKVREFLDFTIAHGGEVLL 176
           RFAGIW+ RHWI LRKIDGVWYNLDSDLAAP+ F D  KVREFLD T+ HGGE+L 
Sbjct: 121 RFAGIWRSRHWIALRKIDGVWYNLDSDLAAPQPFLDTYKVREFLDSTLVHGGEILF 176


>Glyma01g27200.1 
          Length = 338

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 23/180 (12%)

Query: 2   ATGNSHVYHERQRLQFCLLHSLNSLFQQKDAFTRTTLNAISERLALDESSNETWTPLPFL 61
           A+    +YHE Q  + C +H +N++ Q    F+   L A    LA D    E    LP L
Sbjct: 5   ASNGGMLYHEVQESKLCAVHCVNTVLQGP-FFSEFDLAA----LASDLDRKERQVMLPAL 59

Query: 62  ----FKPHHNALTGNYDINVLIAALEEKGKSVVWHDRRNGASSIDLDAPEDVLMGIVINV 117
               F+ H+ +L G++ I VL  ALE      VW         I LD+P  V     I+ 
Sbjct: 60  ASADFESHNVSLDGDFSIQVLQKALE------VW-----DLQVIPLDSP--VAEPAQIDP 106

Query: 118 LVTRFAGIWKGRHWITLRKIDGVWYNLDSDLAAPKAFCDKEKVREFLDFTIAHGGEVLLV 177
            +          HW  +RK++G WYN DS  AAP+    K  +  +LD     G  + LV
Sbjct: 107 ELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQHL-SKFYLSAYLDSLKGFGWSIFLV 165


>Glyma03g14740.1 
          Length = 336

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 23/180 (12%)

Query: 2   ATGNSHVYHERQRLQFCLLHSLNSLFQQKDAFTRTTLNAISERLALDESSNETWTPLPFL 61
           A+    +YHE Q  + C +H +N++ Q    F+   L A    LA D    E    LP L
Sbjct: 6   ASNGGMLYHEVQESKLCAVHCVNTVLQGP-FFSEFDLAA----LASDLDRKERQVMLPAL 60

Query: 62  ----FKPHHNALTGNYDINVLIAALEEKGKSVVWHDRRNGASSIDLDAPEDVLMGIVINV 117
               F+ H+ +L G++ I VL  ALE      VW         I LD+P  V     I+ 
Sbjct: 61  SSADFESHNVSLDGDFSIQVLQKALE------VW-----DLQVIPLDSP--VAEPAQIDP 107

Query: 118 LVTRFAGIWKGRHWITLRKIDGVWYNLDSDLAAPKAFCDKEKVREFLDFTIAHGGEVLLV 177
            +          HW  +RK++  WYN DS  AAP+    K  +  +LD     G  + LV
Sbjct: 108 ELENAFICHLQDHWFCIRKVNREWYNFDSLYAAPQHLS-KFYLSAYLDSLKGFGWSIFLV 166