Miyakogusa Predicted Gene

Lj2g3v2245110.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2245110.1 tr|G7K6B3|G7K6B3_MEDTR Josephin-like protein
OS=Medicago truncatula GN=MTR_5g069880 PE=4
SV=1,78.92,0,JOSEPHIN,Machado-Joseph disease protein MJD; SUBFAMILY
NOT NAMED,NULL; JOSEPHIN 1, 2,NULL; Josephin,,CUFF.38754.1
         (555 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595031 similar to UniRef100_A7NYJ9 Cluster: Chromosom...   289   9e-78
gnl|LJGI|BP034949 similar to UniRef100_A7NYJ9 Cluster: Chromosom...   264   5e-70

>gnl|LJGI|BW595031 similar to UniRef100_A7NYJ9 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 474

 Score =  289 bits (146), Expect = 9e-78
 Identities = 146/146 (100%)
 Strand = Plus / Plus

                                                                       
Query: 81  tcagcaaaaggatgcttttactcgaacaacattgaatgcaatttctgaaagacttgcact 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcagcaaaaggatgcttttactcgaacaacattgaatgcaatttctgaaagacttgcact 388

                                                                       
Query: 141 tgatgagtccagcaatgaaacctggacaccactacctttccttttcaaaccccatcacaa 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgatgagtccagcaatgaaacctggacaccactacctttccttttcaaaccccatcacaa 448

                                     
Query: 201 tgcattgactggaaactatgatatca 226
           ||||||||||||||||||||||||||
Sbjct: 449 tgcattgactggaaactatgatatca 474



 Score =  167 bits (84), Expect = 9e-41
 Identities = 84/84 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaactgggaattcccatgtctatcacgaaaggcaaaggttgcagttctgtctcctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  atggcaactgggaattcccatgtctatcacgaaaggcaaaggttgcagttctgtctcctg 103

                                   
Query: 61  cactctctcaactctctctttcag 84
           ||||||||||||||||||||||||
Sbjct: 104 cactctctcaactctctctttcag 127


>gnl|LJGI|BP034949 similar to UniRef100_A7NYJ9 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 180

 Score =  264 bits (133), Expect = 5e-70
 Identities = 171/180 (95%), Gaps = 9/180 (5%)
 Strand = Plus / Plus

                                                                       
Query: 207 gactggaaactatgatatcaatgttctcattgcggcttt-----ggaagagaaagggaag 261
           |||||||||||||||||||||||||||||||||||||||     ||||||||||||||||
Sbjct: 1   gactggaaactatgatatcaatgttctcattgcggcttttnnntggaagagaaagggaag 60

                                                                       
Query: 262 agtgtg-gtttggcat-ga--tcgtcgaaacggggcgtcgtcgattgatctcgatgcgcc 317
           |||||| ||||||||| ||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agtgtgngtttggcattgaantcgtcgaaacggggcgtcgtcgattgatctcgatgcgcc 120

                                                                       
Query: 318 tgaagatgttttgatggggattgtgatcaatgttttggtgactaggtttgctgggatttg 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaagatgttttgatggggattgtgatcaatgttttggtgactaggtttgctgggatttg 180