Miyakogusa Predicted Gene

Lj2g3v1902100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1902100.1 Non Characterized Hit- tr|G7IDZ3|G7IDZ3_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.15,0.000000002, ,gene.g42400.t1.1
         (542 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g099825.1 | hypothetical protein | HC | chr1:45056995-4505...    70   6e-12

>Medtr1g099825.1 | hypothetical protein | HC |
           chr1:45056995-45054222 | 20130731
          Length = 517

 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 89/202 (44%), Gaps = 27/202 (13%)

Query: 262 KQDRCNP---DLQSQEELELNSSCNSLDGESNSSSEICWPDEDSLIAFDGSFLLPEVGNS 318
           KQDR  P   D Q  +E EL SS   ++  S     +C PDEDSLIA+DG FL  E+  S
Sbjct: 255 KQDRFAPIIPDDQIHQESELKSSNVRIEDCSTVIPGLCLPDEDSLIAYDGPFLNHEMEIS 314

Query: 319 AVGDNFMSNPETSPNKADGF-SPRSPHEMIEKLVESILNDDDSTPAPHF--DDP------ 369
              D+FMS PE++  + D   S  S  +MI  LVE +L+D D     +F  DD       
Sbjct: 315 LGIDSFMSAPESNLTEDDDLDSQSSTFDMIMNLVEFVLDDSDDDYDSNFECDDSLMDRIR 374

Query: 370 --IVHHGAGTGFYPPVHAQQPY------------PQLCSNQLNPRRGQQ-SHNSFQENFI 414
             +V HG        + A+               P L SNQLNP   QQ  HN F  +  
Sbjct: 375 AVLVQHGYDVSLMDRIMAELVQHEARLGQSKLSNPWLSSNQLNPGSDQQDDHNCFLRSST 434

Query: 415 GSPTFSLFSHPFPSNSISPPFL 436
               FS      P   I   FL
Sbjct: 435 DPAVFSQSKLSCPCRKIYEIFL 456