Miyakogusa Predicted Gene
- Lj2g3v1828360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1828360.1 tr|G7KAT3|G7KAT3_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,74.11,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
seg,NUL,CUFF.37870.1
(651 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 660 0.0
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 82 1e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 2e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 6e-15
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 78 2e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 76 7e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 7e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 73 5e-13
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 67 3e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 5e-11
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 66 7e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 8e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 65 1e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 64 2e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 64 4e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 8e-10
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 60 6e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 57 3e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 57 5e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 54 3e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 51 2e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 51 2e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 49 8e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 49 9e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26596207-26598192 FORWARD
LENGTH=661
Length = 661
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/649 (51%), Positives = 442/649 (68%), Gaps = 15/649 (2%)
Query: 7 LRPFFSELQLQLRSYVVPRDPFPSKVSHYLTRAKLIDSIRLTLRS-DTANSSLPTLVNHR 65
++PF S + Q+R + RDPFP+KV HYL RA LIDSIRL+LRS T++ +L +L+NHR
Sbjct: 10 VKPFNSVIIHQIRFF--SRDPFPNKVQHYLYRANLIDSIRLSLRSPTTSDRTLASLLNHR 67
Query: 66 LVDSFVVTHXXXXXXXXXXXXXX-XXXXXXXPYFSHTQNTLHALATVLAKSGRRAELKSL 124
L+DSFVV + P FS TLHA ATVLAK R +EL SL
Sbjct: 68 LLDSFVVKNALRSSPSVSSAWSIFKTLSHKSPRFSFETETLHAFATVLAKFQRSSELNSL 127
Query: 125 LDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQYRL--DNTHACTESYNVVMALC 182
+ + A +F NV FS M LL +A A D DS L+ WD+YR + CTESYN+VM +
Sbjct: 128 IGVVNAWKFRNVHFSFMNLLNLYATAGDFDSVLKTWDEYRCSGEEKKGCTESYNIVMQVY 187
Query: 183 VEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTG 242
+ +G D+EAV+ F ++I+EG +PN R+ TI++EHLVK L AM++F +PLMRI RT
Sbjct: 188 MTLGKDSEAVQTFDQIINEGGIPNSRTFTIMIEHLVKLGNLDAAMKIFETLPLMRITRTL 247
Query: 243 KQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVSLSLQQMQEEGLLKGVDEFLREL 302
K YS+L+E F ++RF EV L+ EM+ DG PSR + L++M+E G +EFLRE+
Sbjct: 248 KHYSVLVEAFVDAQRFDEVKTLIAEMKSDGKFPSRRMLEPLKRMREAGFEHETEEFLREM 307
Query: 303 LRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXN-NVDGIHLKPWLDPQALASALKNWSPDE 361
L DE + I YS+ + N + LKPWLDP+ALA++LK WS D
Sbjct: 308 LPDERIKDIS--MYSMDNPSDSEDEGDEYKDDVNEAQVKLKPWLDPKALATSLKKWSSDA 365
Query: 362 VSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHG 421
V+ALE ANFVWT LVCK+LR ++PETAW+FFCWV QPGFTH+ T++R+M +LAR+G
Sbjct: 366 VTALEEANFVWTNLLVCKMLRNFRAPETAWSFFCWVAIQPGFTHDAYTIERMMAMLARNG 425
Query: 422 HSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXX 481
ELVDKLISK+R EG++LPFSTIRLIID YG+SK +AA+KVFN DR LCG IS+ N
Sbjct: 426 QVELVDKLISKVRIEGIKLPFSTIRLIIDLYGISKKPEAAIKVFNEDRTLCGSISDFNLM 485
Query: 482 XXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTM 541
KC RN++AL+ L++M+L G+ PDIQTFSGLM++FA G+I+TV +LF+M
Sbjct: 486 LLYSSLLRTLTKCKRNAEALETLEDMMLTGVSPDIQTFSGLMYHFALQGEIQTVERLFSM 545
Query: 542 VRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
VRQIGLEPD Y+ K+L++ YC +R+ LA+++F+DMK+S +PD TK LLVKSLW+E K
Sbjct: 546 VRQIGLEPDPYMLKLLVQAYCRCERSVLAYRVFQDMKDSNLMPDRETKELLVKSLWREEK 605
Query: 602 RKEAAAVEESCEE------IKSPLPLALPGHSWTVSSADLTRVYNIYSN 644
RKEAAAVEES EE + L LAL GH WT+SS D++RVYN+Y +
Sbjct: 606 RKEAAAVEESYEEENDNKNSSNVLRLALKGHVWTISSTDISRVYNLYRD 654
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 6/253 (2%)
Query: 357 WSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTL 416
W P AL+ ++L+++ A FF W+ QPGF H+ +T ++
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGN 373
Query: 417 LARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNN-DRILCGPI 475
L R ++KL+ ++ +G + T +I YG + + A+ VFN C P
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP- 432
Query: 476 SNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTV 535
K G A+DM M G+ PD T+S +++ G +
Sbjct: 433 ----DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 536 RKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
KLF + G P+ Y I+++ + ++ A KL+ DM+N+GF PD T ++++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 596 LWKEGKRKEAAAV 608
L G +EA AV
Sbjct: 549 LGHCGYLEEAEAV 561
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 6/253 (2%)
Query: 357 WSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTL 416
W P AL+ ++L+++ A FF W+ QPGF H+ +T ++
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGN 373
Query: 417 LARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNN-DRILCGPI 475
L R ++KL+ ++ +G + T +I YG + + A+ VFN C P
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP- 432
Query: 476 SNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTV 535
K G A+DM M G+ PD T+S +++ G +
Sbjct: 433 ----DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 536 RKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
KLF + G P+ Y I+++ + ++ A KL+ DM+N+GF PD T ++++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 596 LWKEGKRKEAAAV 608
L G +EA AV
Sbjct: 549 LGHCGYLEEAEAV 561
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 6/253 (2%)
Query: 357 WSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTL 416
W P AL+ ++L+++ A FF W+ QPGF H+ +T ++
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGN 373
Query: 417 LARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNN-DRILCGPI 475
L R ++KL+ ++ +G + T +I YG + + A+ VFN C P
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP- 432
Query: 476 SNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTV 535
K G A+DM M G+ PD T+S +++ G +
Sbjct: 433 ----DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 536 RKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
KLF + G P+ Y I+++ + ++ A KL+ DM+N+GF PD T ++++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 596 LWKEGKRKEAAAV 608
L G +EA AV
Sbjct: 549 LGHCGYLEEAEAV 561
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 22/279 (7%)
Query: 340 HLKPWLDPQALASALK--NWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWV 397
H P + ++S L+ W AL F ++L+++ + A FF W+
Sbjct: 290 HCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWL 349
Query: 398 TNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKN 457
QPGF H+ +T ++ L R ++KL+ ++ +G + T +I YG +
Sbjct: 350 KRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANY 409
Query: 458 ADAALKVFNN--------DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMIL 509
A+ VFN DR+ + +++ K G A+DM M
Sbjct: 410 LKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA------------KAGFLDIAMDMYQRMQE 457
Query: 510 NGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAAL 569
G+ PD T+S +++ G + +LF + G P+ + I+I + ++
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYET 517
Query: 570 AWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
A KL+ DM+N+GF PD T ++++ L G +EA V
Sbjct: 518 ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGV 556
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 185/476 (38%), Gaps = 59/476 (12%)
Query: 153 VDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTI 212
+D A + Q R D +YN+++ + G EA+R+ ++M EG+ PN + TI
Sbjct: 196 LDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTI 255
Query: 213 IMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEG-FAGSKRFGEVGILVNEMQVD 271
+++ + + ++ EA++ MM + ++ + G F +LV M+ D
Sbjct: 256 LIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKD 315
Query: 272 GIMPSREVSLSLQQMQEEGLLKGVDEFLRELLRDEGNQGI--KNVRYSIXXXXXXXXXXX 329
+ L + + K +FLR++ G +G + ++
Sbjct: 316 SNLQRVGYDAVLYCLSNNSMAKETGQFLRKI----GERGYIPDSSTFNAAMSCLLKGHDL 371
Query: 330 XXXXNNVDGI---HLKPWLDP-----QALASALKNWSPDEVSALEGAN----FVWTTRLV 377
DG +KP + QAL +A + D G + V++ V
Sbjct: 372 VETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAV 431
Query: 378 CKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEG 437
L K + E A F + ++ G + N+ T ++ + G + V ++ K+ G
Sbjct: 432 IDCLCKARRIENAAMFLTEMQDR-GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHG 490
Query: 438 MRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRN 497
+ T LII+ LC +
Sbjct: 491 FKPDVITFSLIIN-------------------CLC--------------------RAKEI 511
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
DA D EM+ GI P+ T++ L+ + GD KLF +++ GL PD Y Y
Sbjct: 512 KDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNAT 571
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
I+ +C ++ A +L + M G PD+ T L+K+L + G+ EA + S E
Sbjct: 572 IQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIE 627
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 185/448 (41%), Gaps = 24/448 (5%)
Query: 186 GNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQY 245
G +A ++M + G + N S ++ L+KS+ EAMEV+ M L + + + Y
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 246 SILIEGFAGSKRFGEVGILVNEMQVDGIMPS-REVSLSLQQMQEEGLLKGVDEFLRELLR 304
S L+ G + V L+ EM+ G+ P+ ++ ++ + G + E L+ +
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM-- 284
Query: 305 DEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNVD----GIH----------LKPWLDPQAL 350
D+ G V Y++ + G H L + D + L
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 351 ASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTV 410
S + WS E+ V T ++ L K + A++ + +Q G N++T
Sbjct: 345 DSVKQFWS--EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ-GILPNLHTY 401
Query: 411 QRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRI 470
++ L R + +L + + G++ T + ID+YG S ++ +AL+ F +
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 471 LCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLG 530
G N+ K GR+ +A + + G+ PD T++ +M ++ +G
Sbjct: 462 K-GIAPNI---VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 531 DIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKM 590
+I KL + + + G EPD + LI + R AWK+F MK P T
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 591 LLVKSLWKEGKRKEAAAVEESCEEIKSP 618
L+ L K GK +EA + E + P
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/510 (20%), Positives = 192/510 (37%), Gaps = 60/510 (11%)
Query: 151 RDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSC 210
RD+DS + + + ++ + + + G EA + +RM DEG P+ +
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 211 TIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQV 270
T++++ L ++KL A EVF M R K Y L++ F+ ++ V +EM+
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 271 DGIMPS-REVSLSLQQMQEEGLLKGVDEFLRELLRDEG---NQGIKNVRYSIXXXXXXXX 326
DG +P ++ + + + G + L +++RD+G N N
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTL-DVMRDQGILPNLHTYNTLIC-GLLRVHRL 414
Query: 327 XXXXXXXNNVDGIHLKPWLDPQALASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKS 386
N++ + +KP + S D VSALE K+K+
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE-------------TFEKMKT 461
Query: 387 PETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIR 446
G NI + LA+ G ++ ++ G+ T
Sbjct: 462 --------------KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 447 LIIDFYGLSKNADAALKVFNN--------DRILCGPISNVNXXXXXXXXXXXXXKCGRNS 498
+++ Y D A+K+ + D I+ + N K R
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT------------LYKADRVD 555
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+A M M + P + T++ L+ G I+ +LF + Q G P+ + L
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSP 618
+ C + LA K+ M + G +PD T ++ L K G+ KEA +++ P
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP 675
Query: 619 ----LPLALPGHSWTVSSADLTRVYNIYSN 644
L LPG V ++ + Y I +N
Sbjct: 676 DFVTLCTLLPG---VVKASLIEDAYKIITN 702
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 417 LARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVF--------NND 468
+ G ++ L ++ EG+R T +++D + D L F N D
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 469 RILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILN-GICPDIQTFSGLMHYFA 527
+ I N K R +AL + +EM + GI PD+ T++ L+
Sbjct: 996 VVCYNLIIN------------GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 528 NLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSA 587
G ++ K++ +++ GLEP+ + + LI GY S + A+ +++ M GF P++
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 588 T 588
T
Sbjct: 1104 T 1104
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%)
Query: 122 KSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMAL 181
K + + ++ R + + +TLL + RD+DS + W + D ++ +++
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 182 CVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRT 241
+ GN EA M D+G LPN + ++ L++ +L +A+E+F M + +K T
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 242 GKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPS 276
Y + I+ + S +M+ GI P+
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G A + M+ G+ PD++T+S L+ +G + F +++ GL PD
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNS-GFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y ++I G S R A LF +MK S G PD T L+ +L G +EA +
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR +A + + M+ G P+ ++ L++ F G+ LF + + G+ PD
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y +L++ C R F+++K SG PD L++ L K + +EA
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 493 KCGRNSDALDML-DEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
K G DALD+ D M P T+ L+ + G + ++LF + G P+
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+Y ILI G+ + A A LF+ M G PD T +LV L G+ E
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 218/527 (41%), Gaps = 68/527 (12%)
Query: 106 HALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQYR- 164
++L L+K+ R E +S L ++ F+ + + A + SA + + R
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 165 ---LDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQ 221
L N CT ++ C + G EA ++ M+D+G L + ++ T++M L K+
Sbjct: 551 CGVLPNKVLCT---GLINEYC-KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 222 KLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVSL 281
K+ +A E+F M I Y +LI GF+ + + +EM +G+ P ++
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP----NV 662
Query: 282 SLQQMQEEGLLK-GVDEFLRELLRDEGNQGI--KNVRYSIXXXXXXXXXXXXXXXNNVDG 338
+ M G + G E +ELL + +G+ V Y +DG
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI----------------IDG 706
Query: 339 IHLKPWLDPQALASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVT 398
+ LA A + + ++ L +FV+TT LV R L E A F T
Sbjct: 707 -----YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT-LVDGCCR-LNDVERAITIFG--T 757
Query: 399 NQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFS-----TIRLIIDFYG 453
N+ G + ++ + + G +EL ++++++ +G F T ++ID+
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL-MDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 454 LSKNADAALKVFNNDRILCGPISNVN---XXXXXXXXXXXXXKCGRNSDALDMLDEMILN 510
N +AA ++F+ + N N K GR ++ + DE I
Sbjct: 817 KEGNLEAAKELFHQ-------MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Query: 511 GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQI--------GLEPDAYLYKILIEGYC 562
GI PD +S +++ F G K +V Q+ G + + L+ G+
Sbjct: 870 GIEPDHIMYSVIINAFLKEG---MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926
Query: 563 NSKRAALAWKLFEDMKNSGFLPDSATKMLLV-KSLWKEGKRKEAAAV 608
+A K+ E+M ++PDSAT + L+ +S +R EA AV
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 15/155 (9%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R DA+ +L EM GI PDI ++ L+ + + R + + GL+P+A+ Y
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
I GY + A A K ++M+ G LP+ L+ K+GK V E+C
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK------VIEACSAY 580
Query: 616 KSPLPLALPGHSWTVSSADLTRVYNIYSNSFASND 650
+S + + G + T Y + N ND
Sbjct: 581 RSMVDQGILGDAKT---------YTVLMNGLFKND 606
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 29/242 (11%)
Query: 377 VCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAE 436
V K++ P A F + + QP F H+ ++ ++ L R + L+D +++K R+
Sbjct: 54 VQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSS 113
Query: 437 GMRLPFSTIRLIIDFYGLSKNADAALKVFNN-------------DRILCGPISNVNXXXX 483
G L +I Y +K + L F +RIL +S+
Sbjct: 114 GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR----- 168
Query: 484 XXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVR 543
G A ++ L+G+ P+ ++++ LM F D+ +LF +
Sbjct: 169 -----------GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 544 QIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRK 603
+ + PD YKILI+G+C + A +L +DM N GF+PD + L+ SL ++ + +
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 604 EA 605
EA
Sbjct: 278 EA 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 113/256 (44%), Gaps = 11/256 (4%)
Query: 365 LEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARH-GHS 423
L G F + + K+ + K PE + F + + FT + R++ +L H G+
Sbjct: 117 LTGEIFTY----LIKVYAEAKLPEKVLSTF-YKMLEFNFTPQPKHLNRILDVLVSHRGYL 171
Query: 424 ELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXX 483
+ +L R G+ + L++ + L+ + A ++F ++L + V
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFG--KMLERDV--VPDVDS 227
Query: 484 XXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVR 543
+ G+ + A+++LD+M+ G PD +++ L++ ++ KL ++
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 544 QIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRK 603
G PD Y +I G+C RA A K+ +DM ++G P+S + L+ L +G
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 604 EAAA-VEESCEEIKSP 618
E +EE + SP
Sbjct: 348 EGKKYLEEMISKGFSP 363
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 98 FSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSAL 157
F H T + + ++GR + S+ ++ K + +L+ W +++ DVD A+
Sbjct: 118 FKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAM 177
Query: 158 RVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHL 217
R+W++ R + SY M + G EA V++ M+ PNC + T++ME+L
Sbjct: 178 RLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYL 237
Query: 218 VKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVN---EMQVDGIM 274
V + K EA+++F M + ++ +ILI A + +FGE + M+ +G++
Sbjct: 238 VATGKCEEALDIFFKMQEIGVQPDKAACNILI---AKALKFGETSFMTRVLVYMKENGVV 294
Query: 275 PSREVSL-SLQQMQEEGLLKGVDEFLREL 302
+ + +L+ ++ G D+ LRE+
Sbjct: 295 LRYPIFVEALETLKAAG---ESDDLLREV 320
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 6/213 (2%)
Query: 372 WTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLIS 431
W + ++ ++L+ + AW FF W GF H+ T ++ + G + + +
Sbjct: 87 WDSHIINRVLKAHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFH 146
Query: 432 KIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRI-LCGPISNVNXXXXXXXXXXX 490
++ +G+ + T +I + S + D A++++ R C P
Sbjct: 147 LMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEP-----TVVSYTAYMKM 201
Query: 491 XXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPD 550
GR +A ++ EM+ + + P+ T++ LM Y G + +F +++IG++PD
Sbjct: 202 LFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPD 261
Query: 551 AYLYKILIEGYCNSKRAALAWKLFEDMKNSGFL 583
ILI + ++ MK +G +
Sbjct: 262 KAACNILIAKALKFGETSFMTRVLVYMKENGVV 294
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R S+A +MLD M+ N PDI TF+ L+ + + + K+F + + GL +A Y
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
IL++G+C S + LA +LF++M + G LPD T +L+ L GK ++A + E ++
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 616 KSPLPLAL 623
K L + +
Sbjct: 468 KMDLGIVM 475
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 444 TIRLIIDFYGLSKNADAALKVFNN--DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDAL 501
T +I Y + K D +KVF N R G ++N + G+ A
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKR---GLVANA---VTYSILVQGFCQSGKIKLAE 423
Query: 502 DMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGY 561
++ EM+ +G+ PD+ T+ L+ + G ++ ++F +++ ++ +Y +IEG
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 562 CNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
C + AW LF + G P+ T +++ L K+G EA + EE
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ +A ++ EMI GI P+I T++ LM + + + ++ + PD +
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
LI+GYC KR K+F ++ G + ++ T +LV+ + GK K A
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ S+A+ ++D M+ NG PD+ T++ +++ GD L + + ++ D + Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I+ C A LF++M+ G T LV+ L K GK + A
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 4/195 (2%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNAD 459
+ G ++ T ++ + R G + L L+ K+ ++ T IID D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 460 AALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
AA+ +F G S+V K G+ +D +L +M+ I P++ TF
Sbjct: 246 AAISLFKEMETK-GIKSSV---VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
+ L+ F G ++ +L+ + G+ P+ Y L++GYC R + A + + M
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 580 SGFLPDSATKMLLVK 594
+ PD T L+K
Sbjct: 362 NKCSPDIVTFTSLIK 376
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 194/497 (39%), Gaps = 35/497 (7%)
Query: 152 DVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCT 211
DV AL ++ + +Y +M ++ + +F MI+ G P+ + T
Sbjct: 413 DVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAIT 472
Query: 212 IIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVD 271
++ + ++AEA +VF+ M IK T K YSI ++ S R+ E+ + N+M
Sbjct: 473 AVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHAS 532
Query: 272 GIMPSREV-SLSLQQMQEEGLLKGVDEFLRELLR------DEGNQGIKNVRYSIXXXXXX 324
I+ ++ S + M++ G + + ++E+ + DE N G +S
Sbjct: 533 KIVIRDDIFSWVISSMEKNGEKEKI-HLIKEIQKRSNSYCDELN-GSGKAEFSQEEELVD 590
Query: 325 XXXXXXXXXNNVDGIHLKPWL------DPQALASAL---KNWSPDEVSALEGANFVWTTR 375
+ L P L D Q + L ++W + ALE + +T
Sbjct: 591 DYNCPQLVQQSA----LPPALSAVDKMDVQEICRVLSSSRDWERTQ-EALEKSTVQFTPE 645
Query: 376 LVCKILRKLKSPETA-WNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIR 434
LV ++LR K A FF WV + G+ HN + + + + L ++R
Sbjct: 646 LVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMR 705
Query: 435 AEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKC 494
+G + T ++I YG + + A++ F + + G I + K
Sbjct: 706 RQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDM-GLIP--SSSTFKCLITVLCEKK 762
Query: 495 GRN-SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
GRN +A EMI +G PD + + +G+ K + + +IG P
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVA 821
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
Y I I C + A + L D T +V L + G ++A S +
Sbjct: 822 YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881
Query: 614 EIKSPLPLALPG-HSWT 629
EI + PG H +T
Sbjct: 882 EIGTK-----PGVHVYT 893
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 365 LEGANFVWTTRLVCKILRK-LKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHS 423
LE +F + +V +L++ K P A FF WV + GF+H + ++++ +
Sbjct: 146 LEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNL 205
Query: 424 ELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXX 483
++VD+L+S++ G T ++I YG +K L VF R +
Sbjct: 206 DMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIM 265
Query: 484 XXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLF-TMV 542
GR AL+ EM+ GI ++T+ L+ A + V+ + MV
Sbjct: 266 IRSLCIA----GRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMV 321
Query: 543 RQIGL-EPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
R + E DA+ Y L++ +C S + A +L ++KN D+ +LVK L + +
Sbjct: 322 RICEISEHDAFGY--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANR 379
Query: 602 RKEAAAV 608
+A +
Sbjct: 380 MVDALEI 386
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 113/577 (19%), Positives = 219/577 (37%), Gaps = 94/577 (16%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRF------GNVKFSLMTLLQWHAAARDVDSAL 157
T ++ + L K G+ + + D+E + ++ ++LM L+ ++ A
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM--LKGFCKVGLLEDAK 311
Query: 158 RVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHL 217
+++ R ++ A +SYN+ + V G EA V ++M D+G P+ S I+M+ L
Sbjct: 312 TLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL 371
Query: 218 VKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMP-S 276
K L++A + +M + Y L+ G+ + L+ EM + +P +
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Query: 277 REVSLSLQQMQEEGLLKGVDEFLRELLRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNV 336
++ L + + G + +E LR++ +E G+ V +I V
Sbjct: 432 YTCNILLHSLWKMGRISEAEELLRKM--NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 337 DGIHLKPWLDPQALASAL----------KNWSPDEVS-------ALEGANFVWTTRLVCK 379
G+ + L ++ N PD ++ + F L +
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAE 549
Query: 380 IL-RKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGM 438
++ KL+ A+N F + G I++ RV+ + + G + ++ S I G+
Sbjct: 550 MMGEKLQPDSVAYNIFIHHFCKQG---KISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 439 RLPFSTIRLIIDFY---GLSKNADAALKVFNND-RILCGPISNVNXXXXXXXXXXXXXKC 494
+ I ++D G+S N + +N + LC +
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPN----ICTYNTAIQYLC--------------------EG 642
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQI--------- 545
+ DA ++LDEM+ I P++ +F L+ F + D +++F I
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYS 702
Query: 546 -------------------------GLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNS 580
G E +LYK L+E C +A + M +
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDR 762
Query: 581 GFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKS 617
G+ D A M ++ L K G +KEA + + E+ S
Sbjct: 763 GYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMAS 799
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 10/245 (4%)
Query: 376 LVCKILRKLKSPETAWNFFCWVTNQPGF-THNIN-----TVQRVMTLLARHGHSELVDKL 429
LV +L+ +P AW F + + P +H I+ T+ R++ H + + L
Sbjct: 5 LVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNL 64
Query: 430 ISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXX 489
I + + + S++ ++ + S + D A F R N
Sbjct: 65 I--LSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFP--ENKPSVYLYNLLLE 120
Query: 490 XXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEP 549
K R + +M+L GI P TF+ L+ + + R+LF + + G +P
Sbjct: 121 SCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKP 180
Query: 550 DAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVE 609
+ + + IL+ GYC + +L M++ G LP+ +V S +EG+ ++ +
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMV 240
Query: 610 ESCEE 614
E E
Sbjct: 241 EKMRE 245
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A ++ DEM G P+ TF L+ + G +L + G+ P+ +Y ++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+C R + K+ E M+ G +PD T + +L KEGK +A+ +
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 119/290 (41%), Gaps = 44/290 (15%)
Query: 360 DEVSALEGANFVWTTRLVCKILRKLKSP-ETAWNFFCWVTNQPGFTHN------------ 406
D V L + V T LV ++LR+ + A+ FF W +Q G+ H+
Sbjct: 118 DVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLG 177
Query: 407 -------------------------INTVQRVMTLLARHG-HSELVDKLISKIRAEGMRL 440
++T+ +VM LA+ G +++ VD + ++ G++
Sbjct: 178 KCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKT 237
Query: 441 PFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDA 500
+ ++D + + A +VF P + K + DA
Sbjct: 238 DTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDART-----FNILIHGFCKARKFDDA 292
Query: 501 LDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEG 560
M+D M + PD+ T++ + + GD + V ++ +R+ G P+ Y I++
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 561 YCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
SK+ A A ++E MK G +PD+ L+ L K G+ K+AA + E
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 30/240 (12%)
Query: 377 VCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAE 436
V K++ P A F + + QP F H+ ++ ++ L R + L+D +++K R+
Sbjct: 54 VQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSS 113
Query: 437 GMRLPFSTIRLIIDFYGLSKNADAALKVFNN-------------DRILCGPISNVNXXXX 483
G L +I Y +K + L F +RIL +S+
Sbjct: 114 GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR----- 168
Query: 484 XXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVR 543
G A ++ L+G+ P+ ++++ LM F D+ +LF +
Sbjct: 169 -----------GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 544 QIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPD-SATKMLLVKSLWKEGKR 602
+ + PD YKILI+G+C + A +L +DM N GF+PD + L + ++ EGK+
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKK 277
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 194/498 (38%), Gaps = 40/498 (8%)
Query: 113 AKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWD---QYRLDNTH 169
+SG E LL+ + K + L++ R++ A+RV + ++ +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 170 ACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEV 229
A YN ++ +M +A RV RM + P+ + I++ L KL A++V
Sbjct: 160 A----YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 230 FNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSR-EVSLSLQQMQE 288
N + + T Y+ILIE E L++EM G+ P + ++ M +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 289 EGLLKGVDEFLRELLRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQ 348
EG++ E +R L + + Y+I ++ W + +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDV--ISYNILLRAL---------------LNQGKWEEGE 318
Query: 349 ALASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNIN 408
L + + + D N V + L+ + R K E A N + + G T +
Sbjct: 319 KLMTKMFSEKCD-------PNVVTYSILITTLCRDGKIEE-AMNLL-KLMKEKGLTPDAY 369
Query: 409 TVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNN- 467
+ ++ R G ++ + + + ++G ++ + AD AL++F
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 468 DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFA 527
+ C P S+ G AL M+ EM+ NGI PD T++ ++
Sbjct: 430 GEVGCSPNSS-----SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 528 NLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSA 587
G + +L +R P Y I++ G+C + R A + E M +G P+
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544
Query: 588 TKMLLVKSLWKEGKRKEA 605
T +L++ + G R EA
Sbjct: 545 TYTVLIEGIGFAGYRAEA 562
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
P++ T+S L+ G I+ L ++++ GL PDAY Y LI +C R +A +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 574 FEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
E M + G LPD ++ +L K GK +A +
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ AL +L++++ + P + T++ L+ G + KL + GL+PD + Y
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSL-----WKEGKRKEAAAVE 609
+I G C A+++ +++ G PD + +L+++L W+EG++
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 610 ESCE 613
E C+
Sbjct: 327 EKCD 330
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T L + L + GR E K L ++ K + +L+ +++VD A+R ++
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 253
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
+ +Y+ +M + G +A+ +F+ M+ G PN + T ++ L K QK+
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSR 277
EA+E+ + M L +K Y +I GF +F E ++EM + GI P+R
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 11/197 (5%)
Query: 413 VMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKN---ADAALKVF-NND 468
V+ +L L K +R G LP + L + L +N DA LK+F
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIG--LPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP 184
Query: 469 RILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFAN 528
+ C P S + GR +A + EM+ P + T++ L++
Sbjct: 185 KRGCDPDS-----YTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 529 LGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSAT 588
++ + ++ G+EP+ + Y L++G C R+ A +LFE M G P+ T
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 589 KMLLVKSLWKEGKRKEA 605
L+ L KE K +EA
Sbjct: 300 YTTLITGLCKEQKIQEA 316
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G L + EM G PD T+ L+ G I +KLFT + + P Y
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
LI G C SK A + E+MK+ G P+ T L+ L K+G+ +A + E
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 494 CG-RNSD-ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
CG +N D A+ L+EM GI P++ T+S LM G +LF M+ G P+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
Y LI G C ++ A +L + M G PD+ ++ K +EAA
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 506 EMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSK 565
+M+ +G+ PDI T+S L+ N G ++T +F +++ +EPD Y Y I+IEG C +
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 566 RAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLP 620
+ W LF + G P+ T ++ ++G ++EA A+ +E + PLP
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE-EGPLP 569
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R S+A+ ++D M++ G PD+ T+ +++ GDI L + Q +EP +Y
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I+ CN K A LF +M N G P+ T L++ L G+ +A+
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR SDA +L +MI I P++ TFS L+ F G + KL+ + + ++PD + Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
LI G+C R A +FE M + P+ T L+K K A V+E E
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK------AKRVDEGMEL 418
Query: 615 IKSPLPLALPGHSWTVSS 632
+ L G++ T ++
Sbjct: 419 FREMSQRGLVGNTVTYTT 436
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R + +++ EM G+ + T++ L+H F + + +F + G+ PD
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y IL++G CN+ + A +FE ++ S PD T ++++ + K GK ++
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A + DEMI I PDI T+S L++ F + + +F ++ P+
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
Y LI+G+C +KR +LF +M G + ++ T L+ ++
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
AL +L +M+ G PDI T + L++ F + I L + ++G +PD++ + LI
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIK 616
G RA+ A L + M G PD T ++V L K G A ++ + E+ K
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 511 GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALA 570
GI ++ T+S L++ F + + + ++G EPD L+ G+C+ R + A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 571 WKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
L M G+ PDS T L+ L++ + EA A+
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +A M + MI P++ T++ L+ F + +LF + Q GL + Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
LI G+ ++ A +F+ M + G LPD T +L+ L GK + A V E +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 616 K 616
K
Sbjct: 496 K 496
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 388 ETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRL 447
E A N F +TN+ ++ + ++ + + G +L ++++++ + + +
Sbjct: 356 EAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 448 IIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEM 507
+ID + + D AL +F R L + V+ K GR+ +ALD+L EM
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT----KVGRSEEALDILREM 470
Query: 508 ILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRA 567
GI D+ T++ L+ + G V+K+FT +++ + P+ Y LI+GY
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 568 ALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA-VEESCEEIKSP 618
A ++F + K++G D L+ +L K G A + ++E +E SP
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 75/197 (38%), Gaps = 11/197 (5%)
Query: 413 VMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILC 472
+++ L R+G + ++ A G +I YG S + A+ VFN+
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS----- 293
Query: 473 GPISNVNXXXXXXXXXXXXXKCGRNS----DALDMLDEMILNGICPDIQTFSGLMHYFAN 528
+ CG+ DEM NG+ PD TF+ L+ +
Sbjct: 294 --MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 529 LGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSAT 588
G + R LF + +E D + Y L++ C + LA+++ M +P+ +
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 589 KMLLVKSLWKEGKRKEA 605
++ K G+ EA
Sbjct: 412 YSTVIDGFAKAGRFDEA 428
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 1/200 (0%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T ++L V ++ G ++L D++ +R FS TLL +D A + Q
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
+ SY+ V+ + G EA+ +F M G + S ++ K +
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPS-REVSLS 282
EA+++ M + IK+ Y+ L+ G+ ++ EV + EM+ + ++P+ S
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 283 LQQMQEEGLLKGVDEFLREL 302
+ + GL K E RE
Sbjct: 521 IDGYSKGGLYKEAMEIFREF 540
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 10/219 (4%)
Query: 98 FSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMT----LLQWHAAARDV 153
+ +T AL + +SG E S+ + + K +G ++ +L+T + +
Sbjct: 264 YGNTVYAFSALISAYGRSGLHEEAISVFNSM--KEYG-LRPNLVTYNAVIDACGKGGMEF 320
Query: 154 DSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTII 213
+ +D+ + + ++N ++A+C G A +F M + + S +
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 214 MEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGI 273
++ + K ++ A E+ MP+ RI YS +I+GFA + RF E L EM+ GI
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 274 MPSREVSLSLQQMQEEGLLKGVDEFLRELLRDEGNQGIK 312
R +L + + G E ++LR+ + GIK
Sbjct: 441 ALDRVSYNTLLSIYTK---VGRSEEALDILREMASVGIK 476
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 4/230 (1%)
Query: 373 TTRLVCKILRKL-KSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLIS 431
T+ V ++LR +S + FF W + P +T + + LA H E + K++
Sbjct: 76 TSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILK 135
Query: 432 KIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXX 491
+++ + + T+ II+ YG + + D A+++FN G V+
Sbjct: 136 QMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDV 195
Query: 492 XKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
A ++ MI G+ PD +T++ L++ + + G +K ++ + + G P A
Sbjct: 196 KMF---HGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPA 252
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
+LIEG N+ A ++ M GF+PD T +L++++ K G+
Sbjct: 253 RGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G NI T ++ L + G+ E KL+ + A G+ T ++D Y S D A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 462 LKVFNN--DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
++ + L I N G D +L+ M+ GI P+ TF
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLH------GMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
+ L+ + ++K ++ + G+ PD Y+ L++G+C ++ AW LF++MK
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 580 SGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
GF +T +L+K K K EA V
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
++A + EMI GI PD ++ L+ F GDI+ K F + + PD Y +
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
I G+C A KLF +M G PDS T L+ K G K+A V
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A +L M L G PD+ ++S +++ + G++ V KL ++++ GL+P++Y+Y
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I C + A A + F +M G LPD+ L+ K G + A+
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 506 EMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSK 565
EM I PD+ T++ ++ F +GD+ KLF + GLEPD+ + LI GYC +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 566 RAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
A+++ M +G P+ T L+ L KEG
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 494 CGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
C + + A+ + E G+C ++ +++ ++H+ LG IK L ++ G PD
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
Y ++ GYC WKL E MK G P+S ++ L + K EA EE+
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA---EEAFS 340
Query: 614 EI 615
E+
Sbjct: 341 EM 342
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G DA + + MI G P++ T++ L+ GD+ + +L + +IGL+P+ +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y ++ G C S A KL + + +G D+ T L+ + K G+ +A +
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G +A + EM G+ PD TF+ L++ + G +K ++ + Q G P+ Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
LI+G C A +L +M G P+ T +V L K G +EA +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G NI T ++ L + G+ E KL+ + A G+ T ++D Y S D A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 462 LKVFNN--DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
++ + L I N G D +L+ M+ GI P+ TF
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLH------GMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
+ L+ + ++K ++ + G+ PD Y+ L++G+C ++ AW LF++MK
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 580 SGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
GF +T +L+K K K EA V
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
++A + EMI GI PD ++ L+ F GDI+ K F + + PD Y +
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
I G+C A KLF +M G PDS T L+ K G K+A V
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A +L M L G PD+ ++S +++ + G++ V KL ++++ GL+P++Y+Y
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I C + A A + F +M G LPD+ L+ K G + A+
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 506 EMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSK 565
EM I PD+ T++ ++ F +GD+ KLF + GLEPD+ + LI GYC +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 566 RAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
A+++ M +G P+ T L+ L KEG
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 494 CGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
C + + A+ + E G+C ++ +++ ++H+ LG IK L ++ G PD
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
Y ++ GYC WKL E MK G P+S ++ L + K EA EE+
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA---EEAFS 340
Query: 614 EI 615
E+
Sbjct: 341 EM 342
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G DA + + MI G P++ T++ L+ GD+ + +L + +IGL+P+ +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y ++ G C S A KL + + +G D+ T L+ + K G+ +A +
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G +A + EM G+ PD TF+ L++ + G +K ++ + Q G P+ Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
LI+G C A +L +M G P+ T +V L K G +EA +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 7/186 (3%)
Query: 425 LVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNN-DRILCGPISNVNXXXX 483
L +L+ +R G+R T ++ N D A+KVF + + C P
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQP-----DLWT 334
Query: 484 XXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVR 543
+CG ++A + E+ L G PD T++ L++ FA + + V++++ ++
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 544 QIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN-SGFLPDSATKMLLVKSLWKEGKR 602
++G D Y +I Y + LA +L++DMK SG PD+ T +L+ SL K +
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Query: 603 KEAAAV 608
EAAA+
Sbjct: 455 VEAAAL 460
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 3/222 (1%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
GF + T ++ AR ++E V ++ +++ G T II YG D A
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
L+++ + + L G + K R +A ++ EM+ GI P +QT+S
Sbjct: 422 LQLYKDMKGLSGRNPDA---ITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSA 478
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
L+ +A G + F+ + + G +PD Y ++++ AW L+ DM + G
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 582 FLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLAL 623
P L++ L KE + + EE+ PL +
Sbjct: 539 HTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEI 580
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 7/216 (3%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G + + ++ ++ L G E + ++ +++ G ++ S+I L++D + + N
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEV 876
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
K++++ + G + + K R DA M+ EM ++ ++
Sbjct: 877 KKIYSSMKA-AGYLPTIRLYRMMIELLC---KGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
++ + + D K +++ +++ GLEPD Y LI YC +R + L + M+N G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 582 FLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKS 617
P T L+ + GK+K E+ EE+ S
Sbjct: 993 LDPKLDTYKSLISAF---GKQKCLEQAEQLFEELLS 1025
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 108/282 (38%), Gaps = 32/282 (11%)
Query: 356 NWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMT 415
+W P VS L V T +V ++L+ A FF W Q G+ H+
Sbjct: 108 HWGPSVVSELNKLRRV-TPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAY 166
Query: 416 LLARHGHSELVDKLISKIRAEG-----------MRLPFSTIRLIIDFYGLSKNADAALK- 463
L R+GH D+L + ++G +R+ R + +Y K K
Sbjct: 167 CLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKP 226
Query: 464 -VFNNDRILCGPISN------------------VNXXXXXXXXXXXXXKCGRNSDALDML 504
VF +RI+ + N V K GR + L++L
Sbjct: 227 RVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEIL 286
Query: 505 DEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNS 564
M N PD+ ++ ++ + G++ +++ +R+ ++PD Y L+ G C
Sbjct: 287 QRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKD 346
Query: 565 KRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
R ++LF +MK L D +L++ +GK + A
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 8/252 (3%)
Query: 357 WSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTL 416
W PD ALE RLV IL FF W + F H+ +T ++
Sbjct: 76 WGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRC 135
Query: 417 LARHG-HSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDR-ILCGP 474
L + E+ + +R + + + + ++ G +K AL VF + C P
Sbjct: 136 LEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKP 195
Query: 475 ISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGIC-PDIQTFSGLMHYFANLGDIK 533
S+ G++ ++ EM G C PD T+S L+ + LG
Sbjct: 196 TSSTYNSVILMLMQE-----GQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRND 250
Query: 534 TVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLV 593
+ +LF ++ ++P +Y L+ Y + A LFE+MK +G P T L+
Sbjct: 251 SAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 594 KSLWKEGKRKEA 605
K L K G+ EA
Sbjct: 311 KGLGKAGRVDEA 322
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
KCG+ S+A+D+ +EM G PD+ ++ LM G I L + + G D
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+ I++ G+ + A ++FE +K+SG PD T L+ G +EAA
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAA 604
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 37/150 (24%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLF------------- 539
K GR +A +M+ +G+ PD+ + LM+ +G ++ + +F
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVV 374
Query: 540 ---TMVRQI--------------------GLEPDAYLYKILIEGYCNSKRAALAWKLFED 576
T+++ + + P + Y ILI+GYC + R A L E+
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 577 MKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
M GF P A L+ +L K KR EAA
Sbjct: 435 MDEKGFPPCPAAYCSLINALGK-AKRYEAA 463
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/440 (20%), Positives = 175/440 (39%), Gaps = 70/440 (15%)
Query: 174 SYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMM 233
S+ +++ C E G ++ + + + G PN T +++ K ++ +A ++F M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 234 PLMRIKRTGKQYSILIEGF--AGSKRFGEVGILVNEMQVDGIMPS-REVSLSLQQMQEEG 290
+ + + Y++LI G G K+ G + +MQ DG+ P+ + + Q+ ++G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFE--MYEKMQEDGVFPNLYTYNCVMNQLCKDG 282
Query: 291 LLKGVDEFLRELLRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQAL 350
K + E+ R+ G V Y+ VD + ++P +
Sbjct: 283 RTKDAFQVFDEM-RERG-VSCNIVTYNTLIGGLCREMKLNEANKVVDQMK-SDGINPNLI 339
Query: 351 ASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTV 410
+ ++G V + R LKS G + ++ T
Sbjct: 340 TYN---------TLIDGFCGVGKLGKALSLCRDLKSR--------------GLSPSLVTY 376
Query: 411 QRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRI 470
+++ R G + K++ ++ G++ T ++ID + S N + A+++
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL------ 430
Query: 471 LCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLG 530
L M +E+ G+ PD+ T+S L+H F G
Sbjct: 431 -----------------------------RLSM-EEL---GLVPDVHTYSVLIHGFCIKG 457
Query: 531 DIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKM 590
+ +LF + + EP+ +Y +I GYC + A KL ++M+ P+ A+
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 591 LLVKSLWKEGKRKEAAAVEE 610
+++ L KE K KEA + E
Sbjct: 518 YMIEVLCKERKSKEAERLVE 537
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR DA + DEM G+ +I T++ L+ + K+ ++ G+ P+
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y LI+G+C + A L D+K+ G P T +LV ++G AA + +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 613 EE 614
EE
Sbjct: 400 EE 401
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
++A ++D+M +GI P++ T++ L+ F +G + L ++ GL P Y IL
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKS 617
+ G+C + A K+ ++M+ G P T +L+ + + ++A + S EE
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE--- 436
Query: 618 PLPLALPGHSWTV 630
L L H+++V
Sbjct: 437 -LGLVPDVHTYSV 448
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 8/217 (3%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIID-FYGLSKNA 458
+ G + NI T ++ L R +K++ +++++G+ T +ID F G+ K
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 459 DA-ALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQ 517
A +L R L + N + G S A M+ EM GI P
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFC------RKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 518 TFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDM 577
T++ L+ FA +++ +L + ++GL PD + Y +LI G+C + A +LF+ M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 578 KNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
P+ ++ KEG A + + EE
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G +M ++M +G+ P++ T++ +M+ G K ++F +R+ G+ +
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y LI G C + A K+ + MK+ G P+ T L+ GK +A ++ C
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL---C 361
Query: 613 EEIKS 617
++KS
Sbjct: 362 RDLKS 366
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 167/436 (38%), Gaps = 39/436 (8%)
Query: 183 VEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTG 242
V+ G+ A A V++RM+ +G PN + TI+++ L + ++ EA ++ + ++ +
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 243 KQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREV-SLSLQQMQEEGLLKGVDEFLRE 301
YS LI+GF L +M G P + + + + ++GL+
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM--------- 477
Query: 302 LLRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQALASALKNWSPDE 361
+ +R+S+ + +DG W ALK +
Sbjct: 478 ---------LHAMRFSVKMLGQSIRLNVVVFNSLIDG-----WCRLNRFDEALKVFRLMG 523
Query: 362 VSALEGANFVWTTRLVCKILR----KLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLL 417
+ ++ +TT + I+ K P F + + + +I V+ LL
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLF-DLMQRNKISADIAVCNVVIHLL 582
Query: 418 ARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRIL-CGPIS 476
+ E K + + M T +I Y + D A ++F ++ GP
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP-- 640
Query: 477 NVNXXXXXXXXXXXXXKCGRNS--DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKT 534
C N A+ M M G P+ T+ LM +F+ DI+
Sbjct: 641 -----NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 535 VRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK 594
KLF +++ G+ P Y I+I+G C R A +F ++ LPD +L++
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 595 SLWKEGKRKEAAAVEE 610
K G+ EAA + E
Sbjct: 756 GYCKVGRLVEAALLYE 771
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 472 CGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGD 531
CGP NV K G A D+ M GI PD+ +S L+ + G
Sbjct: 280 CGPAPNV---VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 532 IKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKML 591
+ KLF+ G++ D ++ I+ Y S A A +++ M G P+ T +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 592 LVKSLWKEGKRKEA 605
L+K L ++G+ EA
Sbjct: 397 LIKGLCQDGRIYEA 410
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 49/262 (18%)
Query: 357 WSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTL 416
++P VS+L N P+TA +F W++ P F HN+ + ++TL
Sbjct: 25 YTPSHVSSLFSLNL---------------DPQTALSFSDWISRIPNFKHNVTSYASLVTL 69
Query: 417 LARHGHSELVDKLISKIRAEGMRLPFSTIR---LIIDFYGLSKNADA-------ALKVFN 466
L S+ + + KI ++ +++R ++DF + D+ K +N
Sbjct: 70 LC----SQEIPYEVPKITILMIK-SCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYN 124
Query: 467 NDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYF 526
N + G + + EM+ + + PDI TF+ L++ +
Sbjct: 125 N-------------------LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGY 165
Query: 527 ANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDS 586
LG + ++ T + Q G +PD + Y I G+C K A+K+F++M +G +
Sbjct: 166 CKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNE 225
Query: 587 ATKMLLVKSLWKEGKRKEAAAV 608
+ L+ L++ K EA ++
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSL 247
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%)
Query: 138 FSLMTLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQR 197
F+ + + H ++VD+A +V+ + + H SY ++ E EA+ + +
Sbjct: 191 FTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVK 250
Query: 198 MIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKR 257
M D+ PN R+ T++++ L S + +EAM +F M IK Y++LI+ F
Sbjct: 251 MKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDT 310
Query: 258 FGEVGILVNEMQVDGIMPS 276
E L+ M +G+MP+
Sbjct: 311 LDEASGLLEHMLENGLMPN 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+AL +L +M + CP+++T++ L+ G LF + + G++PD +Y +LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
+ +C+ A L E M +G +P+ T L+K K+ K + + E+
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQ 358
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 103/228 (45%), Gaps = 22/228 (9%)
Query: 390 AWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLI- 448
+ FF W QP + H+I + ++ +L++ V LI ++R E +L + ++
Sbjct: 130 GYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVL 189
Query: 449 IDFYGLSKNADAALKV--------FNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDA 500
+ + + A++V F D + G + + K G DA
Sbjct: 190 VQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDA------------LCKHGSVKDA 237
Query: 501 LDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEG 560
+ ++M + +++ F+ L++ + +G + + + + + G EPD Y L+ G
Sbjct: 238 AKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG 296
Query: 561 YCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y N+ + A A+ L DM+ GF P++ +L+++L K + +EA V
Sbjct: 297 YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 40/246 (16%)
Query: 342 KP-WLDPQALASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQ 400
KP W +L S + SP VS+L + P+TA NF W++
Sbjct: 72 KPNWHKSPSLKSMVSAISPSHVSSLFSLDL---------------DPKTALNFSHWISQN 116
Query: 401 PGFTHNINTVQRVMTLLARHGHSELVDK----LISKIRAEGMRLPFSTIRLIIDFY-GLS 455
P + H++ + ++TLL +G+ +V K +I + G L ++D ++
Sbjct: 117 PRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDAL------YVLDLCRKMN 170
Query: 456 KNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPD 515
K+ LK +++ G + + + G + + EM+ + +CP+
Sbjct: 171 KDERFELKY----KLIIGCYNTL---------LNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 516 IQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFE 575
I T++ +++ + LG+++ + + + + GL+PD + Y LI GYC K A+K+F
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 576 DMKNSG 581
+M G
Sbjct: 278 EMPLKG 283
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 138 FSLMTLLQWHAAARDVDSALRVWDQYRLDNTHACTESY-NVVMALCVEMGNDAEAVRVFQ 196
F+ +L+ + +D+DSA +V+++ L +Y +++ LCV D EA+ +F
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID-EAMDLFV 312
Query: 197 RMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSK 256
+M D+ P R+ T++++ L S++ +EA+ + M IK Y++LI+
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC 372
Query: 257 RFGEVGILVNEMQVDGIMPS 276
+F + L+ +M G+MP+
Sbjct: 373 KFEKARELLGQMLEKGLMPN 392
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G A +L M G+ PD T++ ++ ++ LF + Q G+ P+ +Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
LI+GYC + + A + E M + LP+S T L+ L +GK KEA +EE
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 31/239 (12%)
Query: 406 NINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVF 465
NI T +++ + G+ E ++ +SKI G+ F T +I Y K+ D+A KVF
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 466 N---------NDRILCGPISNVNXXXXXXXXXXXXXK--------------------CG- 495
N N+ I + K CG
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 496 -RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
R S+AL+++ EM GI P+I T++ L+ + + R+L + + GL P+ Y
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
LI GYC A + E M++ P++ T L+K K K + + E
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A+ +L++M+ + PD+ T++ L+ G+ + +L +++ GL PD + Y +I+
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
C SKR A LF+ ++ G P+ L+ K GK EA
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFT-MVRQIGLEPDAYLYKILI 558
+++L++M+ + + P+ +++ L+ +G+++ K+F M R G+ P ++ L+
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
C K+ A K+ +DM G LP + +L+ L+K+G+++ +V
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSV 853
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G A +M+ +G PD T++ + + G + + +R+ G+ PD + Y
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
LI+GY + + A+ + + M+++G P T + L+K L + K+ + E C
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G DA+D+++ M + P+ +T++ L+ + K + L M+ + L PD Y
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVL-PDVVTY 465
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
LI+G C S A++L M + G +PD T ++ SL K + +EA + +S E+
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 341 LKPWLDPQALASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQ 400
LK +D L SA+ E+S G P +W+FF W +
Sbjct: 30 LKHKVDSGLLKSAITTQVISELSLFSGYG----------------GPSLSWSFFIWTDSL 73
Query: 401 PGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADA 460
P H++ + +++ +L +H H + +L+ K+ + +R ++ G+S++ +
Sbjct: 74 PSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVG--GVSEDPED 131
Query: 461 ALKVFN------------NDRIL-------CGPISNVNXXXXXXXXXXXXXKCGRNSDAL 501
VF+ ND I+ CG ++ R +D +
Sbjct: 132 VSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQ----RLTDTV 187
Query: 502 -DMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEG 560
+ +M+ G+ +I ++ L+H + GD + KL + + + G+ PD + Y LI
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 561 YCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
YC A + + M+ SG P+ T + +EG+ +EA
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+AL + D M +G+ P+I T++ +H F+ G ++ +LF ++ + + Y LI
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLI 314
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+GYC A +L E M++ GF P T +++ L ++G+ +EA
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+A + L MI G P T+S L+ F N + KL + GL D LY+ LI
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
C ++ A LFE M+ G + DS + + W+ GK EA+A+
Sbjct: 490 RRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A +L EM I PD T + L++ + + D+ + K+ + + GL+ D Y Y
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSY 415
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
K LI G+C A + M GF P AT LV + + K+ E + E E+
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ +A ++ +EMI GI PD T++ L+ F + ++F ++ G EPD Y
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
ILI YC +KR +LF ++ + G +P++ T LV + GK A
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 4/197 (2%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
GF + T V+ L + G+S L L K+ ++ ++ID + D A
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
L +FN + G ++V G+ D ML EMI I PD+ TFS
Sbjct: 265 LSLFNEMEMK-GIKADVVTYSSLIGGLCND---GKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
L+ F G + ++L+ + G+ PD Y LI+G+C A ++F+ M + G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 582 FLPDSATKMLLVKSLWK 598
PD T +L+ S K
Sbjct: 381 CEPDIVTYSILINSYCK 397
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 420 HGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVN 479
H +++ D ++SK G T ++I+ Y +K D +++F G I N
Sbjct: 367 HEANQMFDLMVSK----GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNT- 420
Query: 480 XXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLF 539
+ G+ + A ++ EM+ G+ P + T+ L+ + G++ ++F
Sbjct: 421 --ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 540 TMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKE 599
+++ + +Y I+I G CN+ + AW LF + + G PD T +++ L K+
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 600 GKRKEA 605
G EA
Sbjct: 539 GSLSEA 544
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+A M D M+ G PDI T+S L++ + + +LF + GL P+ Y L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSP 618
G+C S + A +LF++M + G P T +L+ L G+ +A + E ++ +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 619 LPLAL 623
L + +
Sbjct: 488 LGIGI 492
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
ALD+ EM +G+ P+I TFS L+ + N+ DIK L+ + G+ PD Y LI+
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
+ A +L+ DM +G P+ T LV WKEG+
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G A + E+++ + P++ F L+ F ++ T R LF + + G++P+ Y
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+Y LI G+C S A L +M++ PD T +L+ L E + EA
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A + M+ G+ P++ ++ L+H G++ L + + + L PD + Y ILI
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
G C + A A +LF+ MKN P SAT L+ KE ++A
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 512 ICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAW 571
I P T++ L+H + +++ L + + G+EP+ + LI+GYCN + A
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 572 KLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
L+ +M G +PD T L+ + +KE KEA
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA 498
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 507 MILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKR 566
MI G+ PD+ + L G KL + +G++P+ Y+Y I I C +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 567 AALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
A K+FE MK G LP+ T ++ K G ++A +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 171/459 (37%), Gaps = 86/459 (18%)
Query: 174 SYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMM 233
+YNV+++ + G A+ V RM P+ + I+ L S KL +AMEV + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 234 PLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSR-EVSLSLQQMQEEGLL 292
Y+ILIE G L++EM+ G P ++ + + +EG L
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 293 KGVDEFLRELLRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQALAS 352
+FL ++ + + ++I W+D + L +
Sbjct: 291 DEAIKFLNDMPSSGCQPNV--ITHNIILRSMCSTGR---------------WMDAEKLLA 333
Query: 353 AL--KNWSPDEVSALEGANFVWTTRLVCK---ILRKLKSPETAWNFFCWVTNQPGFTH-- 405
+ K +SP V+ NF+ L+ + IL K+ N + GF
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 406 -------------------NINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIR 446
+I T ++T L + G E ++++++ ++G T
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 447 LIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDE 506
+ID GL+K G+ A+ +LDE
Sbjct: 454 TVID--GLAK-------------------------------------AGKTGKAIKLLDE 474
Query: 507 MILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKR 566
M + PD T+S L+ + G + K F ++G+ P+A + ++ G C S++
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 567 AALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
A M N G P+ + +L++ L EG KEA
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Query: 428 KLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXX 487
KL+ ++R G T ++++ D A+K F ND G NV
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK-FLNDMPSSGCQPNV---ITHNII 315
Query: 488 XXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGL 547
GR DA +L +M+ G P + TF+ L+++ G + + + Q G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 548 EPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA 607
+P++ Y L+ G+C K+ A + E M + G PD T ++ +L K+GK ++A
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 608 V 608
+
Sbjct: 436 I 436
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ G + L+ M+ +G PDI + L+ F LG + K+ ++ G PD
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y ++I GYC + A + + M S PD T +++SL GK K+A V
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEV 226
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T + + T L K G+ + +L+ + +K V + T++ A A A+++ D+
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
R + T +Y+ ++ G EA++ F G PN + IM L KS++
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIM 274
A++ M K Y+ILIEG A E L+NE+ G+M
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/520 (20%), Positives = 212/520 (40%), Gaps = 63/520 (12%)
Query: 98 FSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSAL 157
F +TL ++ A SG ++ LL I + ++ S + + + + A D A+
Sbjct: 73 FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAV 132
Query: 158 ----RVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGS----LPNCRS 209
R+ D++R + +S+N V+ + + G + + +++ PN S
Sbjct: 133 DLFHRMVDEFRCKRS---VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189
Query: 210 CTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQ 269
++++ L K + + A+EVF MP + G Y L++G +R E +L++EMQ
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 270 VDGIMPSREV-SLSLQQMQEEGLLKGVDE-----FLRELLRDEGNQGIKNVRYSIXXXXX 323
+G PS + ++ + + ++G L V + FL+ + +E V Y+
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE-------VTYNTL---- 298
Query: 324 XXXXXXXXXXNNVDGIHLKPWLDPQALASALKNWS----PDEVSALEGANFVWTTRLVCK 379
+ G+ LK LD +A++ + S P++V+ N + R
Sbjct: 299 ------------IHGLCLKGKLD-KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 380 ILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMR 439
+R L S E + G+ N + +++ L + G +E L K+ +G +
Sbjct: 346 AVRLLSSME-----------ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK 394
Query: 440 LPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSD 499
+++D + A ++ N I G + N K G +
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNR-MIASGCLPNA---YTYSSLMKGFFKTGLCEE 450
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A+ + EM G + +S L+ +G +K +++ + IG++PD Y +I+
Sbjct: 451 AVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIK 510
Query: 560 GYCNSKRAALAWKLFEDM---KNSGFLPDSATKMLLVKSL 596
G C A KL+ +M + PD T +L+ L
Sbjct: 511 GLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ ++A ++L+ MI +G P+ T+S LM F G + +++ + + G + + Y
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV--EESC 612
+LI+G C R A ++ M G PD+ ++K L G A + E C
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 613 EE 614
+E
Sbjct: 531 QE 532
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 175/461 (37%), Gaps = 47/461 (10%)
Query: 138 FSLMTLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQR 197
F+ LLQ + +RD A V+ + R +YN+++ + D +A +VF+
Sbjct: 204 FTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFED 260
Query: 198 MIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKR 257
M + + TI++ + + K EA+ +FN M + Y+ L++ A K
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320
Query: 258 FGEVGILVNEMQVDGIMPSR-EVSLSLQQMQEEGLLKGVDEFLRELLRDEGNQGIKNVRY 316
+ + + M G P+ SL L + EG L +D + E+ + QGI Y
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGI----Y 375
Query: 317 SIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQALASALKNWSPDEVSALEGANFVWTTRL 376
S + + W P +K +S LE T
Sbjct: 376 S----YLVRTLSKLGHVSEAHRLFCDMWSFP------VKGERDSYMSMLESLCGAGKTIE 425
Query: 377 VCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAE 436
++L K+ + + NTV + L + H + L K++ +
Sbjct: 426 AIEMLSKIHEKGVVTDTMMY-----------NTVFSALGKLKQISH---IHDLFEKMKKD 471
Query: 437 GMRLPFSTIRLIIDFYGLSKNADAALKVFNN-DRILCGP-ISNVNXXXXXXXXXXXXXKC 494
G T ++I +G D A+ +F +R C P I + N
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL--------- 522
Query: 495 GRNSDALDM---LDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
G+N D + EM G+ PD+ T+S LM F ++ LF + G +P+
Sbjct: 523 GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLL 592
Y IL++ + R A A L+ MK G PDS T +L
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ G +A+++ +E+ + PDI +++ L++ GD+ F +++ GL PD
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
Y L+E + ++R +A+ LFE+M G P+ T +L+ L K G+ EA
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAV 602
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ +A++ML ++ G+ D ++ + L I + LF +++ G PD + Y
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
ILI + A +FE+++ S PD + L+ L K G EA
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 369 NFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDK 428
NFV + V K+ PE A FF + N+ T +++ L + G + V
Sbjct: 171 NFVCSA--VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD 228
Query: 429 LISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXX 488
L+ ++ EG F + +G K A + DR + N +
Sbjct: 229 LVRRLEDEGFE--FDCVFYSNWIHGYFKGG-ALVDALMQDREMVEKGMNRDVVSYSILID 285
Query: 489 XXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLE 548
K G +AL +L +MI G+ P++ T++ ++ +G ++ LF + +G+E
Sbjct: 286 GLS-KEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIE 344
Query: 549 PDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
D +LY LI+G C A+ + DM+ G P T ++ L G+ EA V
Sbjct: 345 VDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Query: 609 EES 611
+
Sbjct: 405 SKG 407
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
DA +LD M+ G+ P+I ++ ++ + LG + ++ + + PDA+ +I
Sbjct: 743 DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMI 802
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+GYC A +F + K+ D + L+K +G+ +EA
Sbjct: 803 KGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEA 849
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 10/233 (4%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNAD 459
Q G N+ T V+ L + G ++L L++K+ A + IID ++ D
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 460 AALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
AL +F G NV GR SDA +L +MI I P++ TF
Sbjct: 278 DALNLFKEMETK-GIRPNV---VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
+ L+ F G KL+ + + ++PD + Y L+ G+C R A ++FE M +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 580 SGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVSS 632
PD T L+K K + VE+ E + L G + T ++
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKR------VEDGTELFREMSHRGLVGDTVTYTT 440
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A + D+MI I PDI T++ L++ F + +++F + PD
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y LI+G+C SKR +LF +M + G + D+ T L++ L+ +G A V
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G +A + +M+ +G+ PDI T+S L+ N G ++ ++F +++ ++ D Y+Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
+IEG C + + W LF + G P+ T ++ L + +EA A+ + +E
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 615 IKSPLP 620
PLP
Sbjct: 569 -DGPLP 573
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R D ++ EM G+ D T++ L+ + GD +K+F + G+ PD
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
Y IL++G CN+ + A ++F+ M+ S D +++ + K GK
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 162/442 (36%), Gaps = 103/442 (23%)
Query: 174 SYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAME-VFNM 232
SY +++ G +AV ++ MI G P+ ++C ++ L ++K+ A E V
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEE 210
Query: 233 MPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSR-EVSLSLQQMQEEGL 291
+ R+K + Y+ LI GF + R + L + M G P ++ L + +
Sbjct: 211 IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNM 270
Query: 292 LKGVDEFLRELLRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQALA 351
LK + + E++R GI L + Q L
Sbjct: 271 LKRAEGVMAEMVRS--------------------------------GIQLDAYSYNQLLK 298
Query: 352 SALKNWSPDEVSALEGANFV---WTTRLVCKILRKLKSPETAWNFFCWVTN--------- 399
+ PD+ NF+ R C ++ S T FC +N
Sbjct: 299 RHCRVSHPDKCY-----NFMVKEMEPRGFCDVV----SYSTLIETFCRASNTRKAYRLFE 349
Query: 400 ---QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGM---RLPFSTIRLIIDFYG 453
Q G N+ T ++ R G+S + KL+ ++ G+ R+ ++TI +D
Sbjct: 350 EMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI---LDHLC 406
Query: 454 LSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGIC 513
S N D A VFN +MI + I
Sbjct: 407 KSGNVDKAYGVFN---------------------------------------DMIEHEIT 427
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
PD +++ L+ G + KLF ++ PD +K +I G K+ + A+K+
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Query: 574 FEDMKNSGFLPDSATKMLLVKS 595
++ M + GF D L+K+
Sbjct: 488 WDQMMDKGFTLDRDVSDTLIKA 509
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G +S A +LD+M G+ PD ++ ++ + G++ +F + + + PDA Y
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
LI G C S R A KLFEDMK PD T ++ L + GK+ AA
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIR-GKKLSAA 484
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A + +EM G+ ++ T++ L+ F G+ +KL + ++GL PD Y +++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
C S A+ +F DM PD+ + L+ L + G+ EA + E
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 59/283 (20%)
Query: 372 WTTRLVCK----ILRKLKSPETAWNFFCWV-TNQPGFTHNINTVQRVMTLLARHGHSELV 426
W RL K ++ + ++ + A F + + PGFTHN +T ++ L+R + V
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPV 102
Query: 427 DKLISKIRAEGMRLPFSTIR----LIIDF---YGLSKNADAALKVF-------------- 465
+ L++ +R + I+ L ID YGL+ ++++++F
Sbjct: 103 ESLMADLRNS-----YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRS 157
Query: 466 ---------------------NNDRILCGPISNVNXXXXXXXXXXXXXKCGRN--SDALD 502
N + G N+ C +N A
Sbjct: 158 LNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKAL-----CKKNDIESAYK 212
Query: 503 MLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYC 562
+LDE+ G+ P++ T++ ++ + GD+++ +++ + G PDA Y +L++GYC
Sbjct: 213 VLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYC 272
Query: 563 NSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
R + A + +DM+ + P+ T +++++L KE K EA
Sbjct: 273 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 105 LHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQYR 164
L L L K GR E + L D+ E ++ + TL+ ++ A R+WD
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDEFEKGSIPSL-LTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 165 LDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLA 224
+YNV++ + GN E VRV + M++ G PN + I+ E L K K
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487
Query: 225 EAMEVFNMMPLMRIKRTGKQYSILIEGFAG 254
+AM++ + M +M K + + + ++ FAG
Sbjct: 488 DAMKIVS-MAVMNGKVDKESWELFLKKFAG 516
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G A +L+EM+ G PD T++ LM + LG + + + +EP+ Y
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
++I C K++ A +F++M F+PDS+ ++ +L ++ K EA +
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGL 353
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%)
Query: 138 FSLMTLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQR 197
F+ L++ D++SA +V D+ +Y ++ V G+ A RV +
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 198 MIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKR 257
M+D G P+ + T++M+ K + +EA V + M I+ Y ++I K+
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 258 FGEVGILVNEMQVDGIMP 275
GE + +EM MP
Sbjct: 312 SGEARNMFDEMLERSFMP 329
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+A + +M+ N PD S L+H+ G + RKLF + G P Y LI
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLI 407
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
G C A +L++DM P++ T +L++ L K G KE V E EI
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI 464
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR ++A + DE G P + T++ L+ G++ +L+ + + +P+A+
Sbjct: 378 KEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 436
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y +LIEG + ++ E+M G P+ T ++L + L K GK ++A +
Sbjct: 437 TYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
DA M D M+ G PD+ T++ L+ F ++ KLF + GL DA+ Y L
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
I GYC + + +A K+F M + G PD T +L+ L GK ++A + E ++
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R D + + EM G+ D T++ L+H + G + +K+F + G+ PD
Sbjct: 336 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y IL++ CN+ + A + ED++ S D T ++++ L + K KEA
Sbjct: 396 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+A ++ EMI + P++ T++ L++ F G + + +F ++ G PD Y LI
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
G+C SKR KLF +M G + D+ T L+ + GK A V
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ + A + + M+ G+ PDI T++ L+ N G I+ + +++ ++ D Y
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
I+I+G C + + AW LF + G PD+ + ++ L ++G ++EA ++ C
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA---DKLCRR 489
Query: 615 IK 616
+K
Sbjct: 490 MK 491
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G +A+ +L+EM +GI PDI T+S L++ F +G KT +++ + ++GL P+
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+Y LI C A +++E M G D T +LV SL K GK EA
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
KCG+ +A +L M+ + P I +F+ LMH G++ +L ++ GL+ D
Sbjct: 981 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1040
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSL 596
Y +LI G C ALA++L+E+MK GFL ++ T L++ L
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 106/524 (20%), Positives = 185/524 (35%), Gaps = 43/524 (8%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T + L VL G + L+ +E + + T+L W+ +A+ + D
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
+ A +YN+++ A+ + + M PN + ++ K+
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVSLSL 283
A ++ N M + ++ LI+G F E + M+ G+ PS EVS +
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS-EVSYGV 413
Query: 284 QQMQEEGLLKGVD-EFLRELLRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNVDGIHLK 342
+GL K + + R G+ R + +DG+
Sbjct: 414 LL---DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM--------------IDGLCKN 456
Query: 343 PWLDPQALASALKNWSPDEVSALEGANFVWTTRLV---CKILRKLKSPETAWNFFCWVTN 399
+LD + L S D + + V + L+ CK+ R +TA C +
Sbjct: 457 GFLDEAVVL--LNEMSKDGIDP----DIVTYSALINGFCKVGR----FKTAKEIVCRIY- 505
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEG-MRLPFSTIRLIIDFYGLSKNA 458
+ G + N ++ R G + ++ + EG R F+ L+ K A
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 459 DAA--LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDI 516
+A ++ +D IL +S G A + DEM G P
Sbjct: 566 EAEEFMRCMTSDGILPNTVS-------FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 618
Query: 517 QTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFED 576
T+ L+ G ++ K + + D +Y L+ C S A A LF +
Sbjct: 619 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 678
Query: 577 MKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLP 620
M LPDS T L+ L ++GK A + E + LP
Sbjct: 679 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G + L EM+ ICPD+ TF+ L++ G + L + + G P
Sbjct: 210 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 269
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
Y ++ YC R A +L + MK+ G D T +L+ L + +
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 107/266 (40%), Gaps = 49/266 (18%)
Query: 385 KSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFST 444
+ P+ AW+FFCW Q +THN+ + LVD L + +R S
Sbjct: 130 EKPDIAWSFFCWSRKQKKYTHNLEC------------YVSLVDVLALAKDVDRIRFVSSE 177
Query: 445 IRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDML 504
I+ +F A+A +K F K G + L +
Sbjct: 178 IKKF-EFPMTVSAANALIKSFG--------------------------KLGMVEELLWVW 210
Query: 505 DEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNS 564
+M NGI P + T++ LM+ + + + ++F ++ ++PD Y +I+GYC +
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 565 KRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALP 624
+ A + DM+ G D T M ++++ + + A+ + +E + +P
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG----IQVP 326
Query: 625 GHSWTV------SSADLTRVYNIYSN 644
H++++ L Y ++ N
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFEN 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 14/205 (6%)
Query: 429 LISKIRAEGMRLPFSTIRLIIDFYGLSKNA--DAALKVFNNDRILCGPISNVNXXXXXXX 486
L ++ +G+++P L+I GL K + VF N I G NV
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIG--GLCKEGKLNEGYTVFEN-MIRKGSKPNV---AIYTV 367
Query: 487 XXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIG 546
K G DA+ +L MI G PD+ T+S +++ G ++ F R G
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 547 LEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
L ++ Y LI+G + R A +LFE+M G DS L+ + K K EA
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 607 AV------EESCEEIKSPLPLALPG 625
A+ EE C++ + L G
Sbjct: 488 ALFKRMEEEEGCDQTVYTYTILLSG 512
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T + + K+G+ + L D+E + K + MT++Q A D S + ++ +
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
++++V+ + G E VF+ MI +GS PN T++++ KS +
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEV----------GILVNEM----Q 269
+A+ + + M K YS+++ G + R E G+ +N M
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 270 VDGIMPSREVSLS---LQQMQEEGLLK 293
+DG+ + V + ++M E+G +
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTR 465
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R +A+ +L+EM+LNG P I T++ L+ +A G + +L + + G +PD +
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKE 604
Y L+ G+ + + A +FE+M+N+G P+ T +K GK E
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 10/239 (4%)
Query: 373 TTRLVCKILRKLKSPETAWNFFCWVTNQ---PGFTHNINTVQRVMTLLARHGHSELVDKL 429
T ++ + K+ +P WN + + G + T ++T R + ++
Sbjct: 245 TYNVILNVFGKMGTP---WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301
Query: 430 ISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXX 489
+++A G T ++D YG S A+KV N + +L G ++
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLN-EMVLNGFSPSI---VTYNSLIS 357
Query: 490 XXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEP 549
+ G +A+++ ++M G PD+ T++ L+ F G +++ +F +R G +P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 550 DAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+ + I+ Y N + K+F+++ G PD T L+ + G E + V
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
+ A +LD M G P + T++ LM+ + D ++ + G++PD Y +
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
I YC + R A ++F +M+NSG +PD T + S + +EA V
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ G+ A+ + +EM G P+I TF+ + + N G + K+F + GL PD
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+ L+ + + + +F++MK +GF+P+ T L+ + + G ++A V
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
GF+ +I T +++ AR G + +L +++ +G + T ++ + + ++A
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 462 LKVFNNDR-ILCGP-ISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
+ +F R C P I N G+ ++ + + DE+ + G+ PDI T+
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNR------GKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
+ L+ F G V +F +++ G P+ + LI Y A ++ M +
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 580 SGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
+G PD +T ++ +L + G +++ V E+
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 79/182 (43%)
Query: 98 FSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSAL 157
FS+ + T +AL V KS R E +L+++ F + +L+ +A +D A+
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 158 RVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHL 217
+ +Q T +Y +++ G A+ +F+ M + G PN + ++
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 218 VKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSR 277
K E M++F+ + + + ++ L+ F + EV + EM+ G +P R
Sbjct: 430 GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 489
Query: 278 EV 279
E
Sbjct: 490 ET 491
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 39/251 (15%)
Query: 371 VWTTRLVCKILRKLKS-PETAWNFFCWVTNQPGFTHNINTVQRVMTLL--AR---HGHSE 424
+W R +L +LK P+ A+ FF W + GF H++ + V +L AR +S
Sbjct: 109 IWVPR----VLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSV 164
Query: 425 LVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXX 484
L + ++SK + + +ST + + +G+ DA V
Sbjct: 165 LKEMVLSKADCDVFDVLWSTRNVCVPGFGV---FDALFSVL------------------- 202
Query: 485 XXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQ 544
G +A+ +M + P ++ +GL+H FA LG V++ F +
Sbjct: 203 -------IDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 255
Query: 545 IGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKE 604
G P + Y I+I+ C A LFE+MK G +PD+ T ++ K G+ +
Sbjct: 256 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 315
Query: 605 AAAVEESCEEI 615
E +++
Sbjct: 316 TVCFFEEMKDM 326
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G A + +EM G+ PD T++ ++ F +G + F ++ + EPD Y
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
LI +C + + + + +MK +G P+ + LV + KEG ++A
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 9/203 (4%)
Query: 403 FTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAAL 462
FT+NI ++ + + G E L +++ G+ T +ID +G D +
Sbjct: 263 FTYNI-----MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 463 KVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGL 522
F + +C + K G+ L+ EM NG+ P++ ++S L
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFC----KFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 523 MHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGF 582
+ F G ++ K + +R++GL P+ Y Y LI+ C + A++L +M G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 583 LPDSATKMLLVKSLWKEGKRKEA 605
+ T L+ L + KEA
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEA 456
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMV-RQIGLEPDA 551
K G ++ L +LDEM I + TF L+ + F + GL+ +A
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEES 611
++ +I+G C + A LFE M G +PD L+ +K+G EA A+ +
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 612 CEEIKSPLP-LALPGHSWTVSSAD 634
EI L LA W +S +
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCN 697
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 112/235 (47%), Gaps = 15/235 (6%)
Query: 376 LVCKILRKLK-SPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIR 434
L+ ++L + + + + A+ FFCW + GF H+ T +M++LA+ E + ++ ++
Sbjct: 163 LIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMG 222
Query: 435 AEGMRLPFSTIRLIIDFYGLSKNADAALKVF---NNDRILCGPISNVNXXXXXXXXXXXX 491
+G+ L T + + + +K A+ +F + G + +N
Sbjct: 223 TKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG-VETINCLLDSLGRA--- 277
Query: 492 XKCGRNSDAL-DMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPD 550
K G+ + L D L E P++ T++ L++ + + ++ +++ + GL+PD
Sbjct: 278 -KLGKEAQVLFDKLKERF----TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPD 332
Query: 551 AYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ +++EG S++ + A KLF MK+ G P+ + ++++ K+ + A
Sbjct: 333 IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T++ L L ++ E + L D ++ +RF + LL R++ A R+W+
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
++NV++ + ++A+++F M +G PN RS TI++ K +
Sbjct: 325 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMP 275
A+E F+ M ++ Y+ LI GF K+ V L+ EMQ G P
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 436
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ SDA+ + M G CP++++++ ++ F ++T + F + GL+PDA +Y
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK 594
LI G+ K+ ++L ++M+ G PD T L+K
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 502 DMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGY 561
++L EM G PD +T++ L+ AN + +++ + Q +EP + + ++++ Y
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 562 CNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA-VEESCEE-IKSPL 619
++ + ++E+M G PD + +L++ L EGK +EA +EE ++ +K+PL
Sbjct: 484 FMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPL 543
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ D + +EM GI PD+ T++ L+ G+I+ +KLF + GL PD
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLV 471
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
+ IL+EGYC + A L ++M G P T +++K KEG K A +
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 613 EE 614
E+
Sbjct: 532 EK 533
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ S+A+ M D+M+ G+ P++ T++ L++ F +K +F V+ G P +Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+LI+ YC + + L E+M+ G +PD T L+ L + G + A
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+ALDM + G P + ++ L+ + LG I L + + G+ PD Y LI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
G C + A KLF+ + + G LPD T +L++ ++G+ ++AA
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAA 490
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNA- 458
+ GF N T V+ ++ + G + L +L+ K+ ++L +IID GL K+
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID--GLCKDGS 278
Query: 459 -DAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQ 517
D A +FN I G +++ GR D +L +MI I P++
Sbjct: 279 LDNAFNLFNEMEIK-GFKADI---ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 518 TFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDM 577
TFS L+ F G ++ +L + Q G+ P+ Y LI+G+C R A ++ + M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 578 KNSGFLPDSATKMLLVKSLWKEGK 601
+ G PD T +L+ K +
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANR 418
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 187/484 (38%), Gaps = 46/484 (9%)
Query: 159 VWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLV 218
V D RL + A T+ Y +V+ALC +M + A ++ I CR + +
Sbjct: 88 VIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMG 147
Query: 219 KSQKL----------------------AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSK 256
K KL +EA+E+ + M M K T + L+ G +
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 257 RFGEVGILVNEMQVDGIMPSREVSLS--LQQMQEEGLLKGVDEFLRELLRDEGNQGIKNV 314
+ + +L++ M G P+ EV+ L M + G E LR++ +E N + V
Sbjct: 208 KVSDAVVLIDRMVETGFQPN-EVTYGPVLNVMCKSGQTALAMELLRKM--EERNIKLDAV 264
Query: 315 RYSIXXXXXXXXXXXXXXXNNVDGIHLKPW----LDPQALASALKN---WSP------DE 361
+YSI N + + +K + + L N W D
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 362 VSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHG 421
+ N V + L+ +++ K E + Q G N T ++ +
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREA--DQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 422 HSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXX 481
E +++ + ++G T ++I+ Y + D L++F + L G I+N
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR-EMSLRGVIANT--- 438
Query: 482 XXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTM 541
+ G+ A + EM+ + PDI ++ L+ + G+++ ++F
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 542 VRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
+ + +E D +Y I+I G CN+ + AW LF + G D+ +++ L ++
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 602 RKEA 605
+A
Sbjct: 559 LSKA 562
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +A+ M+D MI G PDI TF+ L++ + I +LF + G+ + Y
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
L++G+C S + +A KLF++M + PD + +L+ L G+ ++A + E+
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 616 KSPLPLAL 623
K L + +
Sbjct: 503 KMELDIGI 510
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ SDA+ ++D M+ G P+ T+ +++ G +L + + ++ DA Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
I+I+G C A+ LF +M+ GF D T L+ G+ + A
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR S+A + +EMI + PDI T+S L++ + ++F + G PD Y
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
ILI GYC SK+ KLF +M G + ++ T +L++ + GK A +
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 62/114 (54%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ + A ++ M+ G+ P+I T++ L+H + G I+ + +++ G++ D Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
I+I G C + A AW ++ + G +PD T ++ L+K+G R+EA A+
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +A +M M+ G PD+ T+S L++ + ++ KLF + Q G+ + Y
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
ILI+GYC + + +A ++F M G P+ T +L+ L GK ++A +
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+C + S AL L +MI G P I TF L++ F + +F + +G +P+
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+Y +I+G C SK+ A L M+ G PD T L+ L G+ +A
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR SDA M+ M I PD+ TF+ L+ G + + + + + L+PD Y
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
+LI G C R A ++F M + G PD T +L+ K K
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R DAL M D+M+ G P++ ++ ++ + L + + G+ PD Y
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
LI G C+S R + A ++ M PD T L+ + KEG+ EA EE EE+
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA---EEFYEEM 282
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 30/271 (11%)
Query: 357 WSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTL 416
W P + L +F V +LR+LK A +F W + H + ++ +
Sbjct: 48 WGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLV 107
Query: 417 LARHGHSELVDKLISKIRAEGMRLPFST-IRLIIDFYGLSKNADAALKV----------- 464
+AR + + +D+++ ++ G +T I +++ +K + V
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 465 FNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDA-LDMLDEMILNGICPDIQTFSGLM 523
F+ L G S VN +SD L + +M G P + F+ L+
Sbjct: 168 FSAYTTLIGAFSAVN-----------------HSDMMLTLFQQMQELGYEPTVHLFTTLI 210
Query: 524 HYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFL 583
FA G + + L ++ L+ D LY + I+ + + +AWK F +++ +G
Sbjct: 211 RGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK 270
Query: 584 PDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
PD T ++ L K + EA + E E+
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR +A +L+E++ G+ P++ T++ L+ +I F ++++ P+
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y ILI G C ++ A+ +++M+ G P + + ++ L K G EA A+
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G M +E+ PD +++S L+H G +LF +++ G D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y I+I+G+C + A++L E+MK GF P T ++ L K + EA
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T ++ VL K+ R E + + +E R ++ T++ + +A D A + ++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
R + +YN ++ +MG EA++VF+ M + + PN + I+++ L ++ KL
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKL 393
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVSLSL 283
A E+ + M + + +I+++ S++ E + EM P SL
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 77/165 (46%)
Query: 112 LAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQYRLDNTHAC 171
K G+ + LL++++ K F + +++ A +D A ++++ +
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 172 TESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFN 231
Y+ ++ ++G EA + + ++ +G PN + +++ LVK++++ EA+ F
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 232 MMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPS 276
M ++ Y ILI G ++F + + EMQ G+ PS
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
KCG+ + A +L+EM G P + T+ ++ A + + LF + +E +
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
+Y LI+G+ R A+ + E++ G P+ T L+ +L K + EA +S
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 613 EEIK 616
+E+K
Sbjct: 719 KELK 722
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 103/513 (20%), Positives = 203/513 (39%), Gaps = 84/513 (16%)
Query: 158 RVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQ--------------------- 196
R+ D RL + A T+ Y++V+ LC +M A ++
Sbjct: 71 RLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAM 130
Query: 197 -RMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGS 255
++I G P+ + + ++ L +++EA+E+ + M M K T + L+ G +
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
Query: 256 KRFGEVGILVNEMQVDGIMPSREVSLS--LQQMQEEGLLKGVDEFLRELLRDEGNQGIKN 313
+ + +L++ M G P+ EV+ L+ M + G E LR++ +E +
Sbjct: 191 GKVSDAVLLIDRMVETGFQPN-EVTYGPVLKVMCKSGQTALAMELLRKM--EERKIKLDA 247
Query: 314 VRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQALASALKNWSPDEVSALEGANFVWT 373
V+YSI +DG+ LD +A ++ E+ + ++T
Sbjct: 248 VKYSII----------------IDGLCKDGSLD-----NAFNLFNEMEIKGFKADIIIYT 286
Query: 374 T--RLVC--------------KILRKLKSPETAWNFF--CWVTN--------------QP 401
T R C I RK+ A++ C+V Q
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G + + T ++ + + + ++ + ++G T ++I+ Y + D
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
L++F L G +++ + G+ A ++ EM+ + PDI ++
Sbjct: 407 LELFRK-MSLRGVVADT---VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
L+ + G+ + ++F + + +E D +Y I+I G CN+ + AW LF + G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 582 FLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
PD T +++ L K+G EA + EE
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 503 MLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYC 562
MLD M+ G P+I+TF+ L++ + I +LF + G+ D Y LI+G+C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 563 NSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLA 622
+ +A +LF++M + PD + +L+ L G+ ++A + E E+ K L +
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 623 L 623
+
Sbjct: 494 I 494
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
DA D+ + L G+ PD++T++ ++ G + LF + + G P+ Y ILI
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ A + KL E++K GF D++T ++V + +G+ K++
Sbjct: 570 RAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV-DMLSDGRLKKS 615
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 493 KCGRNSDALDMLDEMILNGICP-DIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
K GR S+A D+++EM+ G CP D+ T++ +++ F LG++ +KL ++ G +P+
Sbjct: 430 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNT 489
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y L+ G C + ++ A ++ + + P+S T +++ L +EGK EA V
Sbjct: 490 VSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 93/247 (37%), Gaps = 41/247 (16%)
Query: 356 NWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMT 415
+W+P + VC +LR A FF W Q + H+ ++
Sbjct: 156 SWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLE 215
Query: 416 LLARHGHSELVDKLISKIRAEGM-RLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGP 474
+L++ + +++ ++ G+ R P + R+++ +
Sbjct: 216 VLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSY----------------------- 252
Query: 475 ISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKT 534
+ G+ DAL +L M G+ P++ + + F ++
Sbjct: 253 -----------------SRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEK 295
Query: 535 VRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK 594
+ ++ +G+ P+ Y +I GYC+ R A +L EDM + G LPD + ++
Sbjct: 296 ALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG 355
Query: 595 SLWKEGK 601
L KE +
Sbjct: 356 YLCKEKR 362
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 110/537 (20%), Positives = 218/537 (40%), Gaps = 75/537 (13%)
Query: 96 PYFSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDS 155
P FS + L +SG ++K +L+D+++ R + + L++ +A D
Sbjct: 77 PNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDE 136
Query: 156 ALRV--W--DQYRLD-NTHACTESYNVVMALCVEMGNDAEAVRV-FQRMIDEGSLPNCRS 209
L V W D++ L +TH YN ++ L V+ GN + V + +M G P+ +
Sbjct: 137 ILSVVDWMIDEFGLKPDTHF----YNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVST 191
Query: 210 CTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQ 269
++++ L ++ +L A+ + MP + K ++ +++G+ + E
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY------------IEEGD 239
Query: 270 VDGIMPSRE-------------VSLSLQQMQEEGLLKGVDEFLRELLRDEGNQGIKNVRY 316
+DG + RE V++ + +EG ++ F++E+ G +Y
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM---SNQDGFFPDQY 296
Query: 317 SIXXXXXXXXXXXXXXXNNVDGI----HLKPWLDPQALASALKNWSPDEVSALEGANFVW 372
+ V+G+ H+K ++ + + + PD V+
Sbjct: 297 TFNTL--------------VNGLCKAGHVKHAIEIMDVMLQ-EGYDPD----------VY 331
Query: 373 TTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISK 432
T V L KL + A + + + N T +++ L + E +L
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 433 IRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRIL-CGPISNVNXXXXXXXXXXXX 491
+ ++G+ T +I L++N A+++F R C P +
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP----DEFTYNMLIDSLC 446
Query: 492 XKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
K G+ +AL+ML +M L+G + T++ L+ F + ++F + G+ ++
Sbjct: 447 SK-GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y LI+G C S+R A +L + M G PD T L+ + G K+AA +
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R DA ++D+MI+ G PD T++ L+ +F GDIK + + G EPD
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y LI G C + R +A KL ++ G +++ L+++ K EA
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 103/226 (45%), Gaps = 22/226 (9%)
Query: 390 AWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLII 449
+ FF W T QPG+ H+ + ++ +L++ V LI ++R L + +++
Sbjct: 114 GYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVL 173
Query: 450 DFYGLSKN-ADAALKVFNN--------DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDA 500
S N A++V + D + G + + K G +A
Sbjct: 174 MRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA------------LCKNGSVKEA 221
Query: 501 LDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEG 560
+ ++M P+++ F+ L++ + G + +++ +++ GLEPD ++ L+ G
Sbjct: 222 SKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSG 280
Query: 561 YCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
Y ++ + A A+ L DM+ GF P+ +L+++L + KR + A
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 181/432 (41%), Gaps = 57/432 (13%)
Query: 176 NVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPL 235
++V + V+ G E +RVF M+ +G + RSC + + K +++ +E+F M
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 236 MRIKRTGKQYSILIEGFAGSKRFGEV---GILVNEMQVDGIMP-SREVSLSLQQMQEEGL 291
+K T +I++EG R GEV L+ E V GI P + + + ++
Sbjct: 218 SGVKITVYSLTIVVEGLC---RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274
Query: 292 LKGVDEFLRELLRDEGNQGI--KNVRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQA 349
GV+ L+ + +D G+ V Y++ ++ +
Sbjct: 275 FSGVEGVLKVMKKD----GVVYNKVTYTLL---------------------MELSVKNGK 309
Query: 350 LASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINT 409
++ A K + +E V+T+ L+ RK + + A+ F +T + G + + T
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTS-LISWNCRK-GNMKRAFLLFDELT-EKGLSPSSYT 366
Query: 410 VQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA-------- 461
++ + + G + L+++++++G+ + +ID Y D A
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
K F D C I++ + R +A L M+ G+ +++
Sbjct: 427 QKGFQADVFTCNTIASC------------FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
L+ + G+++ ++LF + G++P+A Y ++I YC + A KL +M+ +G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 582 FLPDSATKMLLV 593
PDS T L+
Sbjct: 535 MDPDSYTYTSLI 546
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 10/216 (4%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKN---A 458
G + ++ V+ L R G E KLI + +G++ T II+ Y ++
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 459 DAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQT 518
+ LKV D ++ ++ K G+ SDA + DEM GI D+
Sbjct: 279 EGVLKVMKKDGVVYNKVT-------YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 519 FSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMK 578
++ L+ + G++K LF + + GL P +Y Y LI+G C A L +M+
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 579 NSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
+ G L+ ++G EA+ + + E+
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ 427
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G +A + EM G+ P+ T++ +++ + G IK RKL + G++PD+Y
Sbjct: 481 KEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSY 540
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y LI G C + A +LF +M G +S T +++ L K GK EA
Sbjct: 541 TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 119/538 (22%), Positives = 199/538 (36%), Gaps = 59/538 (10%)
Query: 132 RFGNVKFSLMTLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEA 191
RF + + L+Q A +DSA + + L N + ++G EA
Sbjct: 230 RFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA 289
Query: 192 VRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEG 251
+ + + E +P+ T ++ L ++ EAM+ N M YS L+ G
Sbjct: 290 LTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG 346
Query: 252 FAGSKRFGEVGILVNEMQVDGIMPSREVSLSLQQMQEEGLLKGVDEFLRELLRDEGNQG- 310
K+ G ++N M ++G PS ++ SL G + +LL+ G
Sbjct: 347 CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY---CTSGDHSYAYKLLKKMVKCGH 403
Query: 311 -IKNVRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQALASALKNWSPDEVSALEGAN 369
V Y+I N D + L + LA+ + L N
Sbjct: 404 MPGYVVYNILIGSICGDKDSL----NCDLLDLAEKAYSEMLAAGV---------VLNKIN 450
Query: 370 FVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKL 429
TR +C + E A++ + Q GF + +T +V+ L EL L
Sbjct: 451 VSSFTRCLCSAGKY----EKAFSVIREMIGQ-GFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 430 ISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDR-ILCGPISNVNXXXXXXXXX 488
+++ G+ T +++D + + + A K FN R + C P NV
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP--NV---VTYTALI 560
Query: 489 XXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLE 548
K + S A ++ + M+ G P+I T+S L+ G ++ ++F R G +
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE--RMCGSK 618
Query: 549 ------------------PDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKM 590
P+ Y L++G+C S R A KL + M G P+
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 591 LLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVSSADLTRVYNIYSNSFAS 648
L+ L K GK EA V+ E P L +T SS + R + + AS
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATL------YTYSSL-IDRYFKVKRQDLAS 729
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 10/186 (5%)
Query: 417 LARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRIL---CG 473
L + G + ++ +++ G T +ID Y K D A KV + ++L C
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS--KMLENSCA 741
Query: 474 PISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIK 533
P NV K G+ +A ++ M G P++ T++ ++ F +G I+
Sbjct: 742 P--NV---VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 534 TVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLV 593
T +L + G+ P+ Y++LI+ C + +A L E+MK + + +A ++
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 594 KSLWKE 599
+ KE
Sbjct: 857 EGFNKE 862
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R DA +DEM L G+ P+ +T+ ++H+ + + ++ + + + + EP Y+
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRM---QRSKEAYEVYQTMSCEPTVSTYE 408
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
I++ +CN +R +A K++++MK G LP L+ +L E K ++E+CE
Sbjct: 409 IMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENK------LDEACEYF 462
Query: 616 KSPLPLAL--PGHSWT 629
L + + PGH ++
Sbjct: 463 NEMLDVGIRPPGHMFS 478
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 11/290 (3%)
Query: 346 DPQALASALKNWSPDEVSAL-EGANFVWTTRLVCKILRKLKSPET-AWNFFCWVTNQPGF 403
D + + L ++ +V L A+ + L+ ++L+KL + A + F W NQ GF
Sbjct: 65 DAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGF 124
Query: 404 THNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALK 463
H + ++ L + +L+ L+ ++A+ + L T LI Y ++ A+
Sbjct: 125 KHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIG 183
Query: 464 VFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRN-SDALDMLDEMILNGICPDIQTFSGL 522
F+ + + + RN DA + D+M PDI++++ L
Sbjct: 184 AFHKMEEFGFKMESSDFNRMLDTLSK-----SRNVGDAQKVFDKMKKKRFEPDIKSYTIL 238
Query: 523 MHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGF 582
+ + ++ V ++ ++ G EPD Y I+I +C +K+ A + F +M+
Sbjct: 239 LEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNC 298
Query: 583 LPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVSS 632
P L+ L E K +A E + S PL P ++ V +
Sbjct: 299 KPSPHIFCSLINGLGSEKKLNDALEFFERSKS--SGFPLEAPTYNALVGA 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 3/187 (1%)
Query: 98 FSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKR-FGNVKFSLMTLLQWHAAARDVDSA 156
F HT + +AL L K + + SL+DD++AK+ F+L++ + +A AR V A
Sbjct: 124 FKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALIS--RRYARARKVKEA 181
Query: 157 LRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEH 216
+ + + + +N ++ + N +A +VF +M + P+ +S TI++E
Sbjct: 182 IGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 241
Query: 217 LVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPS 276
+ L EV M + Y I+I +K++ E NEM+ PS
Sbjct: 242 WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPS 301
Query: 277 REVSLSL 283
+ SL
Sbjct: 302 PHIFCSL 308
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ DA ++ +EMI I P+I T++ L++ F G + R++F ++ G PD Y
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
LI G+C K+ A K+F +M G ++ T L++ + GK A V
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +A+ M+++M+ GI PD+ ++ ++ G + LF + G+ PD +Y
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
L+ G CNS R A L M PD T L+ + KEGK +A
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A L +M+ G PDI TF+ L++ F ++ + + ++G++PD +Y +I+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
C + A LF+ M+N G PD LV L G+ ++A ++
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
KC + DA+ + EM G+ + T++ L+ F +G +++F+ + G+ P+
Sbjct: 329 KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKN---SGFLPDSATKMLLVKSLWKEGKRKEAAAVE 609
Y +L+ C + + A +FEDM+ G P+ T +L+ L GK ++A V
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 610 E 610
E
Sbjct: 449 E 449
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ DA+ +L++M G+ PD+ ++S ++ F D+ ++ + + G++PD Y
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
LI+G+C +R A L+E+M G PD T L+ + EG ++A + E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 615 IKSPLP 620
K LP
Sbjct: 549 -KGVLP 553
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+AL + EM+ GI PD T+S L+ F K L+ + ++GL PD + Y LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
YC A +L +M G LPD T +L+ L K+ + +EA
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G AL M EM+ +G+ P + T++ L+H G++ + +R GL P+
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y L++G+ A+++ +M ++GF P T L+ GK ++A AV E
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 613 EE 614
+E
Sbjct: 442 KE 443
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
S A ++ EM+ + + P++ T++ L+ F G+I LF + G P+ Y L
Sbjct: 187 SFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTL 246
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
I+GYC ++ +KL M G P+ + +++ L +EG+ KE + V
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 513 CPDIQ--TFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALA 570
C +I+ + L+ F G + ++F + +PD Y I+I G+C + A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 571 WKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+ L+++M SGFL + T + LVK+L KEGK E +V
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
AL + D+M G P++ T++ L+ + L I KL + GLEP+ Y ++I
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
G C R + +M G+ D T L+K KEG +A
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 6/234 (2%)
Query: 381 LRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRL 440
LR P+ A + F W Q G+ HN ++ + V+ LI ++ A +
Sbjct: 82 LRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEM 141
Query: 441 PFSTIRLIIDF-----YGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCG 495
II F + ++ D K+ +D + C
Sbjct: 142 SVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCY 201
Query: 496 RNSDALDML-DEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
A+ L +M NG+ PD + ++ +A ++ ++F + G EP+AY Y
Sbjct: 202 VYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTY 261
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
L++G C R +++M+ G +P+ + M+L+ SL E + EA V
Sbjct: 262 SYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEV 315
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 97/247 (39%), Gaps = 9/247 (3%)
Query: 377 VCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAE 436
V K+L+ K+P A+ F T PG+ H+ ++ L+ V +++ IR++
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 437 GMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRIL--CGP-ISNVNXXXXXXXXXXXXXK 493
+ +I YG + D AL VF R + C P I + N K
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 494 CGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
+ G+ P++QT++ L+ + + R + + G +PD +
Sbjct: 133 ------VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
Y +I + + A +LF++M G PD +L+ KE K A + +
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 614 EIKSPLP 620
E S P
Sbjct: 247 EDSSVYP 253
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 11/239 (4%)
Query: 373 TTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISK 432
T ++ K+ K K E A F W+ + GF ++ + V+ LA+ G + +L +
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 433 IRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXX 492
+ G+ + ++ID + K+ A++++ DR+L S
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELW--DRLL-EDSSVYPNVKTHNIMISGLS 266
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
KCGR D L + + M N D+ T+S L+H + G++ +F + + D
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Query: 553 LYKILIEGYCNS---KRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y ++ G+C K + W++ E KNS + + +L+K L + GK EA +
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEH-KNS---VNIVSYNILIKGLLENGKIDEATMI 381
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ DA+ ++ M ++ T++ LM F +GD ++ + ++GL+PD Y
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSL 596
+++G C + + A + F+D +N G P T +LV+++
Sbjct: 643 NTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 406 NINTVQRVMTLLARHGHS-ELVDKLISKIRAEGMR---LPFSTIRLIIDFYGLSKNADAA 461
+I T V+ AR G E + L +++R EG++ + ++T+ GL A+
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 269
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
+ N+ I V K R D+L EM G PDI +++
Sbjct: 270 FRTMNDGGI-------VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
L+ +A G IK +F ++ G P+A Y +L+ + S R +LF +MK+S
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 582 FLPDSATKMLLVKSLWKEGKRKEAAA-----VEESCE 613
PD+AT +L++ + G KE VEE+ E
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 46/247 (18%)
Query: 98 FSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAAR---DVD 154
FS+T AL ++GR LLD ++ ++ + T++ +A AR D +
Sbjct: 177 FSYT-----ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVI--NACARGGLDWE 229
Query: 155 SALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMID-------------- 200
L ++ + R + +YN +++ C G EA VF+ M D
Sbjct: 230 GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 201 ---------------------EGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIK 239
GSLP+ S +++E KS + EAM VF+ M
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 240 RTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMP-SREVSLSLQQMQEEGLLKGVDEF 298
YS+L+ F S R+ +V L EM+ P + ++ ++ E G K V
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 299 LRELLRD 305
+++ +
Sbjct: 410 FHDMVEE 416
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 111/235 (47%), Gaps = 15/235 (6%)
Query: 376 LVCKILRKLK-SPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIR 434
L+ ++L + + + + A+ FFCW + GF H+ T +M++LA+ E + ++ ++
Sbjct: 162 LIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMG 221
Query: 435 AEGMRLPFSTIRLIIDFYGLSKNADAALKVF---NNDRILCGPISNVNXXXXXXXXXXXX 491
+G+ L T + + + +K A+ +F + G + +N
Sbjct: 222 TKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG-VETINCLLDSLGRA--- 276
Query: 492 XKCGRNSDAL-DMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPD 550
K G+ + L D L E P++ T++ L++ + + ++ +++ + GL+PD
Sbjct: 277 -KLGKEAQVLFDKLKERFT----PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPD 331
Query: 551 AYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ +++EG S + + A KLF MK+ G P+ + ++++ K+ + A
Sbjct: 332 IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 7/193 (3%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T++ L L ++ E + L D ++ +RF + LL R++ A R+W+
Sbjct: 265 TINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 323
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
++NV++ + ++A+++F M +G PN RS TI++ K +
Sbjct: 324 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 383
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVSLSL 283
A+E F+ M ++ Y+ LI GF K+ V L+ EMQ G P + +L
Sbjct: 384 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
Query: 284 ------QQMQEEG 290
Q+M E G
Sbjct: 444 IKLMANQKMPEHG 456
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ SDA+ + M G CP++++++ ++ F ++T + F + GL+PDA +Y
Sbjct: 347 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK 594
LI G+ K+ ++L ++M+ G PD T L+K
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 502 DMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGY 561
++L EM G PD +T++ L+ AN + +++ + Q +EP + + ++++ Y
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Query: 562 CNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA-VEESCEE-IKSPL 619
++ + ++++M G PD + +L++ L EGK +EA +EE ++ +K+PL
Sbjct: 483 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPL 542
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ + AL + EM GI P I TF+ L+ G I+ KLF + + ++P+ Y
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
++IEGYC + A++ ++M G +PD+ + L+ L G+ EA
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A +++ MI +G+ PD T++ +++ D+K +L+ + + G+ PD Y
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSAT 588
LI G C + A +L +M G +P++ T
Sbjct: 861 NTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%)
Query: 170 ACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEV 229
A T +YN+++ G EA + RMI +G P+C + T ++ L + + +A+E+
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 230 FNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVS 280
+N M I+ Y+ LI G + G+ L NEM G++P+ + S
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTS 895
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ AL L EM+ G+ + ++ L++ GDI + LEP Y
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
L+ GYC+ + A +L+ +M G P T L+ L++ G ++A
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A+++ ++M+ GI PD+ ++G++ L D+ +++ + G + + Y +LI+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
G C ++ A + +D+ PD T LV L K
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
L+M+DEM+ P S L+ G I+ L V G+ P+ ++Y LI+
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
C ++ A LF+ M G P+ T +L+ + GK A
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 416 LLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRI-LCGP 474
L+ R G++E + +++ + + T L+I+ YG + + + K++ R C P
Sbjct: 238 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 297
Query: 475 ISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKT 534
N+ C + + + L E +G+ PD+ ++ LM ++ G
Sbjct: 298 --NICTYTALVNAFAREGLCEKAEEIFEQLQE---DGLEPDVYVYNALMESYSRAGYPYG 352
Query: 535 VRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK 594
++F++++ +G EPD Y I+++ Y + + A +FE+MK G P + MLL+
Sbjct: 353 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412
Query: 595 SLWK 598
+ K
Sbjct: 413 AYSK 416
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 55/97 (56%)
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
P+I T++ L++ FA G + ++F +++ GLEPD Y+Y L+E Y + A ++
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 574 FEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
F M++ G PD A+ ++V + + G +A AV E
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 60/115 (52%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A ++ EM+ +G+ P+I T++ L+ G ++ +F +++ +EP Y Y I+IE
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
G C + + W LF ++ G PD ++ ++G ++EA A+ + +E
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 4/207 (1%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G ++ T V+ L + G ++L L++K+ + IID K+ D A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
L +F G NV GR SDA +L +MI I PD+ TFS
Sbjct: 276 LNLFKEMETK-GIRPNV---VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
L+ F G + KL+ + + ++P Y LI G+C R A ++FE M +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 582 FLPDSATKMLLVKSLWKEGKRKEAAAV 608
PD T L+K K + +E V
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 106/533 (19%), Positives = 196/533 (36%), Gaps = 80/533 (15%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
TL +L S R +E +L+D + + + TL+ A+ + D+
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSL-PNCRSCTIIMEHLVKSQK 222
+Y VV+ + G+ A + +M ++G L P I++ L K +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 223 LAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSR-EVSL 281
+ +A+ +F M I+ YS LI R+ + L+++M I P S
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 282 SLQQMQEEGLLKGVDEFLRELLRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNVDGIHL 341
+ +EG L ++ E+++ + I V YS + ++G +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSI--VTYS----------------SLINGFCM 373
Query: 342 KPWLDPQALASAL---KNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVT 398
LD K+ PD V T + K K K E F ++
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPD----------VVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 399 NQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNA 458
Q G N T ++ L + G ++ ++ ++ ++G+ T ++D GL KN
Sbjct: 424 -QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD--GLCKN- 479
Query: 459 DAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQT 518
G+ A+ + + + + + P I T
Sbjct: 480 ------------------------------------GKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 519 FSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMK 578
++ ++ G ++ LF + G++PD Y +I G+C A LF++MK
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 579 NSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVS 631
G LP+S L+++ ++G R E S E IK G + T+
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDR------EASAELIKEMRSCGFAGDASTIG 610
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 416 LLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRI-LCGP 474
L+ R G++E + +++ + + T L+I+ YG + + + K++ R C P
Sbjct: 260 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 319
Query: 475 ISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKT 534
N+ C + + + L E +G+ PD+ ++ LM ++ G
Sbjct: 320 --NICTYTALVNAFAREGLCEKAEEIFEQLQE---DGLEPDVYVYNALMESYSRAGYPYG 374
Query: 535 VRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK 594
++F++++ +G EPD Y I+++ Y + + A +FE+MK G P + MLL+
Sbjct: 375 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 434
Query: 595 SLWK 598
+ K
Sbjct: 435 AYSK 438
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 55/97 (56%)
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
P+I T++ L++ FA G + ++F +++ GLEPD Y+Y L+E Y + A ++
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 574 FEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
F M++ G PD A+ ++V + + G +A AV E
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 415
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 101/264 (38%), Gaps = 44/264 (16%)
Query: 377 VCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAE 436
V + LR +K P FF WV+N+ GF+H + ++ L R + + +
Sbjct: 71 VLQTLRLIKVPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFL------ 123
Query: 437 GMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGR 496
+ + + ++ +K+ DR I + G
Sbjct: 124 ---------------FSIERRSNGCVKL--QDRYFNSLIRSYG-------------NAGL 153
Query: 497 NSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLF-TMVRQIGLEPDAYLYK 555
+++ + M GI P + TF+ L+ G LF M R G+ PD+Y +
Sbjct: 154 FQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFN 213
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
LI G+C + A+++F+DM+ PD T ++ L + GK K A V +
Sbjct: 214 TLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV------L 267
Query: 616 KSPLPLALPGHSWTVSSADLTRVY 639
L A H VS L R Y
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGY 291
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 100/494 (20%), Positives = 193/494 (39%), Gaps = 48/494 (9%)
Query: 159 VWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQ---------------------- 196
V D RL + A T+ Y++V+ALC +M A ++
Sbjct: 88 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 197 RMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSK 256
++I G PN + + ++ L +++EA+E+ + M M K + L+ G S
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 257 RFGEVGILVNEMQVDGIMPSR-EVSLSLQQMQEEGLLKGVDEFLRELLRDEGNQGIKNVR 315
+ E +L+++M G P+ L M + G E LR++ +E N + V+
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM--EERNIKLDAVK 265
Query: 316 YSIXXXXXXXXXXXXXXXNNVDGIHLKPW----LDPQALASALKN---WSP------DEV 362
YSI N + + +K + L N W D +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 363 SALEGANFVWTTRLVCKILR--KLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARH 420
N V + L+ ++ KL+ E G + T ++ +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI----HRGIAPDTITYTSLIDGFCKE 381
Query: 421 GHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNX 480
H + ++++ + ++G T ++I+ Y + D L++F L G +++
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK-MSLRGVVADT-- 438
Query: 481 XXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFT 540
+ G+ + A ++ EM+ + P+I T+ L+ + G+ + ++F
Sbjct: 439 -VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 541 MVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
+ + +E D +Y I+I G CN+ + AW LF + G P T +++ L K+G
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 601 KRKEAAAVEESCEE 614
EA + EE
Sbjct: 558 PLSEAELLFRKMEE 571
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%)
Query: 503 MLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYC 562
M+D M+ G P+I+TF+ L++ + I +LF + G+ D Y LI+G+C
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 563 NSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLA 622
+ +A +LF++M + P+ T +L+ L G+ ++A + E E+ K L +
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 623 L 623
+
Sbjct: 510 I 510
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
DA D+ + L G+ P ++T++ ++ G + LF + + G PD + Y ILI
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ A + KL E++K GF D++T + +V + +G+ K++
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDAST-IKMVIDMLSDGRLKKS 631
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 94/234 (40%), Gaps = 12/234 (5%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNAD 459
Q G ++ T V+ L + G +L L+ K+ + IID K+ D
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 460 AALKVFNN-DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQT 518
AL +F D P GR SDA +L +MI I P++ T
Sbjct: 276 DALNLFTEMDNKGIRP-----DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 519 FSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMK 578
FS L+ F G + KL+ + + ++PD + Y LI G+C R A +FE M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 579 NSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVSS 632
+ P+ T L+K K A VEE E + L G++ T ++
Sbjct: 391 SKDCFPNVVTYSTLIKGFCK------AKRVEEGMELFREMSQRGLVGNTVTYTT 438
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 495 GRNSDALDML-DEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
R+ D M+ +M+ G+ P+I T++ L+ G + +F +++ +EPD Y
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
Y I+IEG C + + W+LF ++ G P+ ++ ++G ++EA ++ + +
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 614 EIKSPLP 620
E PLP
Sbjct: 566 E-DGPLP 571
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ S+A+ ++D+M+ G PD+ T+ +++ GDI L + + +E D +Y
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I+G C K A LF +M N G PD T L+ L G+ +A+
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R + +++ EM G+ + T++ L+H F D + +F + +G+ P+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y IL++G C + + A A +FE ++ S PD T ++++ + K GK ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A + DEMI I PDI T+S L++ F + + +F ++ P+
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
Y LI+G+C +KR +LF +M G + ++ T L+ ++
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 505 DEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNS 564
++M GI D+ T+S ++ F + + + ++G EPD L+ GYC+S
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 565 KRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA-----VEESCE 613
KR + A L + M G+ PD+ T L+ L+ K EA A V+ C+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ 220
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 4/175 (2%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T L K+ R E L ++ + + TL+ ARD D+A V+ Q
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
H +YN+++ + G A+A+ VF+ + P+ + I++E + K+ K+
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFA--GSKRFGEVGILVNEMQVDGIMPS 276
+ E+F + L + Y+ +I GF GSK E L+ +M+ DG +P+
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE--EADSLLKKMKEDGPLPN 572
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ + A+ + + + + + PDI T++ ++ G ++ +LF + G+ P+
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y +I G+C A L + MK G LP+S T L+++ ++G R E S
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR------EASA 593
Query: 613 EEIKSPLPLALPGHSWTVS 631
E IK G + T+
Sbjct: 594 ELIKEMRSCGFAGDASTIG 612
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R DA+ + DE + C D +TF+ L+ +G + +L ++ G EPD
Sbjct: 183 KLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIV 242
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFL-PDSATKMLLVKSLWKEGKRKEAAAV 608
Y LI+G+C S A ++F+D+K+ PD T ++ K GK +EA+++
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A +LD+M+ GI P TF+ L+ +A G++ T ++ + G PD
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ LI+GYC + + ++L+E+M G P++ T +L+ +L E + +A
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G A ++ +MI G PD+ TF+ L+ + +G + +L+ + G+ P+A+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y ILI CN R A +L + + +P ++ K GK EA + E
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 613 EEIK 616
E+ K
Sbjct: 444 EKKK 447
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGL-EPDAYL 553
G+ AL++L M G PDI T++ L+ F ++ ++F V+ + PD
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y +I GYC + + A L +DM G P + T +LV K G+ A +
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R DA+ + DE + C D +TF+ L+ +G + +L ++ G EPD
Sbjct: 183 KLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIV 242
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFL-PDSATKMLLVKSLWKEGKRKEAAAV 608
Y LI+G+C S A ++F+D+K+ PD T ++ K GK +EA+++
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A +LD+M+ GI P TF+ L+ +A G++ T ++ + G PD
Sbjct: 289 KAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ LI+GYC + + ++L+E+M G P++ T +L+ +L E + +A
Sbjct: 349 TFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G A ++ +MI G PD+ TF+ L+ + +G + +L+ + G+ P+A+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y ILI CN R A +L + + +P ++ K GK EA + E
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 613 EEIK 616
E+ K
Sbjct: 444 EKKK 447
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGL-EPDAYL 553
G+ AL++L M G PDI T++ L+ F ++ ++F V+ + PD
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y +I GYC + + A L +DM G P + T +LV K G+ A +
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+AL++LD M+ NG+ PD+ T++ L++ + V + + + + G P+ + + IL+
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSP 618
E C ++ A L E+MKN PD+ T L+ K G A + EE
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE---- 594
Query: 619 LPLALPGHSWTVSSADLTRVYNIYSNSFA 647
++ VSS+ T YNI ++F
Sbjct: 595 --------AYKVSSS--TPTYNIIIHAFT 613
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G A+ M+ +I G PD+ T++ L++ + + GLEPD+Y Y
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
LI GYC LA ++ D +GF+PD T L+ L EG+ A A+
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 518 TFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDM 577
T++ ++H F ++ KLF + L PD Y Y+++++G+C + L +K +M
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Query: 578 KNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+GF+P T ++ L E + EAA +
Sbjct: 664 MENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G SDA ++ MI G PDI TF+ L+H ++ ++ ++ ++ G++PD Y
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y L+ G C + + + ++ M G P+ T +L++SL + K EA + E
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 98 FSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKRFGN--VKFSLMTLLQWHAAARDVDS 155
F HT +T ++ L G+ ++ +L D+ + GN ++ + ++ + V
Sbjct: 36 FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 156 ALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIME 215
A+ V+++ + SYN +M++ V+ G +A +V+ RM D G P+ S TI M+
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 216 HLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGF 252
K+ + A+ + N M + Y ++ GF
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 5/219 (2%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G + ++T +++ +L + G + +KL+ K+ G+ T L I D A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
+++ I GP +V K + +A L +M+ G+ PD T++
Sbjct: 271 VRMVGC-LIEQGPKPDV---ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
L+ + G ++ ++ G PD + Y+ LI+G C+ A LF + G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 582 FLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLP 620
P+ L+K L +G EAA + E K +P
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSE-KGLIP 424
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 413 VMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILC 472
+M++L G+ + K+ ++R G+ + + + + + AAL++ NN
Sbjct: 117 IMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 473 GPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDI 532
++ V K ++ ++ +M+ +G+ + TF+ L+ GD+
Sbjct: 177 CEMNVVAYCTVVGGFYEENFK----AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 533 KTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLL 592
K KL V + G+ P+ + Y + I+G C A ++ + G PD T L
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 593 VKSLWKEGKRKEA 605
+ L K K +EA
Sbjct: 293 IYGLCKNSKFQEA 305
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+A + +EM G+ P++QTF+ L++ +G + L ++ G PD + + ILI
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA-----AAVEESC 612
GY + A ++ + M ++G PD T L+ L K K ++ VE+ C
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 10/233 (4%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNAD 459
Q G N+ T V+ L + G +L L++K+ A + IID ++ D
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 460 AALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
AL +F G NV GR SDA +L +MI I P++ TF
Sbjct: 203 DALNLFKEMETK-GIRPNV---VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 258
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
+ L+ F G KL + + ++PD + Y LI G+C R A ++FE M +
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 580 SGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVSS 632
PD T L+K K + VE+ E + L G + T ++
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKR------VEDGTELFREMSHRGLVGDTVTYTT 365
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A + D+MI I PDI T++ L++ F + +++F + PD
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y LI+G+C SKR +LF +M + G + D+ T L++ L+ +G A V
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G +A + +M+ +G+ PDI T+S L+ N G ++ ++F +++ ++ D Y+Y
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
+IEG C + + W LF + G P+ T ++ L + +EA A+ + +E
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 615 IKSPLP 620
PLP
Sbjct: 494 -DGPLP 498
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R D ++ EM G+ D T++ L+ + GD +K+F + G+ PD
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
Y IL++G CN+ + A ++F+ M+ S D +++ + K GK
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 511 GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALA 570
GI ++ T++ L++ F I L + ++G EP L+ GYC+ KR + A
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 571 WKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA-----VEESCE 613
L + M G+ PD+ T L+ L+ K EA A V+ C+
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 147
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ S+A+ ++D M+ G P++ T+ +++ GDI L + +E D ++
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I+ C + A LF++M+ G P+ T L+ L G+ +A+
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 110/235 (46%), Gaps = 15/235 (6%)
Query: 376 LVCKILRKLK-SPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIR 434
L+ ++L + + + + A+ FFCW + GF H T +M++LA+ E + ++ ++
Sbjct: 163 LIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMG 222
Query: 435 AEGMRLPFSTIRLIIDFYGLSKNADAALKVF---NNDRILCGPISNVNXXXXXXXXXXXX 491
+G+ L T + + + +K A+ +F + G + +N
Sbjct: 223 TKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG-VETINCLLDSLGRA--- 277
Query: 492 XKCGRNSDAL-DMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPD 550
K G+ + L D L E P++ T++ L++ + + ++ +++ + GL+PD
Sbjct: 278 -KLGKEAQVLFDKLKERFT----PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPD 332
Query: 551 AYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ +++EG S + + A KLF MK+ G P+ + ++++ K+ + A
Sbjct: 333 IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 7/193 (3%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T++ L L ++ E + L D ++ +RF + LL R++ A R+W+
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
++NV++ + ++A+++F M +G PN RS TI++ K +
Sbjct: 325 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVSLSL 283
A+E F+ M ++ Y+ LI GF K+ V L+ EMQ G P + +L
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 284 ------QQMQEEG 290
Q+M E G
Sbjct: 445 IKLMANQKMPEHG 457
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ SDA+ + M G CP++++++ ++ F ++T + F + GL+PDA +Y
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK 594
LI G+ K+ ++L ++M+ G PD T L+K
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 502 DMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGY 561
++L EM G PD +T++ L+ AN + +++ + Q +EP + + ++++ Y
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 562 CNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA-VEESCEE-IKSPL 619
++ + ++++M G PD + +L++ L EGK +EA +EE ++ +K+PL
Sbjct: 484 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPL 543
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
D +L +M NGI PDI T + L+H ++ G+ + + F ++ GL PD +Y+ +I
Sbjct: 402 DVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMI 461
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSP 618
GY N+ + L +L ++M+ M L+++ + G AA + S + S
Sbjct: 462 LGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSM-QYASD 520
Query: 619 LPLALPGHSWTVSS 632
PL+ +S V +
Sbjct: 521 GPLSFEAYSLFVEA 534
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ G A +LD M NG P++ +S LM+ F +G I+ ++ F V++ GL+ D
Sbjct: 280 RAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTV 339
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y L+ +C + A KL +MK S D+ T ++++ L EG+ +EA
Sbjct: 340 GYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 42/248 (16%)
Query: 380 ILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMR 439
++++ + P+ + F + Q GF HN T ++ L RH VD ++ +++ E R
Sbjct: 62 LMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCR 121
Query: 440 LPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSD 499
S ++ + S D +++FN L I+ V
Sbjct: 122 FQESLFLNLMRHFSRSDLHDKVMEMFN----LIQVIARVK-------------------- 157
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQ-IGLEPDAYLYKILI 558
P + S ++ + G++ RKL + +GL+P+ ++ IL+
Sbjct: 158 --------------PSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILV 203
Query: 559 EGYCNSKRAALAWKLFEDMKNSGF-LPDSATKMLLVKSLWKEGKRKEAAAVEES--CEEI 615
+ +C + A+ + E+MK SG P+S T L+ L+ + KEA + E +E
Sbjct: 204 KHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEG 263
Query: 616 KSPLPLAL 623
SP P+
Sbjct: 264 ISPDPVTF 271
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 496 RNSDALDMLDEMI-LNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
R+ +A+++ ++MI GI PD TF+ +++ F G+++ +K+ +++ G P+ Y Y
Sbjct: 247 RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNY 306
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
L+ G+C + A + F+++K +G D+ L+ + G+ EA
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA 357
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDI--------------------EAKRFGNVK--FSLM 141
T +AL + K G+ E + L D++ + RF + K F LM
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 142 ---------TLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAV 192
T++ + A+ VD +++ + A T +YN ++ E+ N A
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 193 RVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGF 252
+FQ MI G P+ +C I++ +++KL EA+E+F ++ + +I Y+I+I G
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 253 AGSKRFGEVGILVNEMQVDGIMP 275
+ E L + + G+ P
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEP 570
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G AL++L +M I PD+ +S ++ G + LF+ + + G+ P+ +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y +I+G+C+ R + A +L DM PD T L+ + KEGK EA E+ C
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA---EKLC 389
Query: 613 EEI 615
+E+
Sbjct: 390 DEM 392
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A D+ EMI +G+CPD T + L++ F ++ +LF +++ ++ D Y I+I
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSL 596
G C + AW LF + G PD T +++
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A ++++M+ G+ D+ T+ +++ +GD K+ L + + + ++PD +Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+I+ C + A LF +M G P+ T ++ G+ +A
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ S+A+ + +EM + PD+ T++ L++ G + +++ ++ G PD Y
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
LI G+C SKR KLF +M G + D+ T +++ ++ G+ A +
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR SDA ++ +M++ I P++ TF+ ++ F G KL+ + + ++PD + Y
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
LI G C R A ++ + M G LPD T L+ K + E
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+C R AL ++ +M+ G PD+ T S L++ F + L + + ++G PD
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+Y +I+G C A +LF+ M+ G D+ T LV L G+ +AA
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R DA+D++ +M G PD+ ++ ++ +G + +LF + + G+ DA Y
Sbjct: 154 RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 213
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
L+ G C S R + A +L DM +P+ T ++ KEGK EA + E
Sbjct: 214 SLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A MLD M+ G PD+ T++ L++ F + KLF + Q GL D Y
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
+I+GY + R A ++F M + P+ T +L+ L + ++A + E+ +
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQ- 408
Query: 615 IKSPLPLALPGHSWTV 630
KS + L + ++ +
Sbjct: 409 -KSEIELDITTYNIVI 423
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A + +M+ +G+ PDI T+S L+ G ++ +F +++ +EPD Y Y I+IE
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
G C + + W LF + G P+ ++ ++G ++EA A+ +E
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR SDA +L +MI I P++ TFS L+ F G + KL+ + + ++PD + Y
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
LI G+C R A +FE M + P+ T L+K K A VEE E
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK------AKRVEEGMEL 417
Query: 615 IKSPLPLALPGHSWTVSS 632
+ L G++ T ++
Sbjct: 418 FREMSQRGLVGNTVTYNT 435
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A + DEMI I PDI T+S L++ F + + +F ++ P+
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
Y LI+G+C +KR +LF +M G + ++ T L++ L++ G
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ S+A+ ++D M+ G PD+ T+ +++ GDI L + + +E D +Y
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I+ CN K A LF +M N G P+ T L++ L G+ +A+
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R + +++ EM G+ + T++ L+ GD +K+F + G+ PD
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y IL++G C + A +FE ++ S PD T ++++ + K GK ++
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 142 TLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDE 201
TL++ A+ V+ + ++ + T +YN ++ + G+ A ++F++M+ +
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 202 GSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEV 261
G P+ + +I+++ L K KL +A+ VF + +++ Y+I+IEG + + +
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 262 GILVNEMQVDGIMPSREVSLSL-QQMQEEGLLKGVDEFLRELLRD 305
L + + G+ P+ + ++ +GL + D RE+ D
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +A M + MI P++ T++ L+ F ++ +LF + Q GL + Y
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
LI+G + +A K+F+ M + G PD T +L+ L K GK ++A V E ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 616 K 616
K
Sbjct: 495 K 495
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR SD ++L +M NG+ P+ T++ L++ + LG +K ++ +++Q + PD
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y ILI G CN+ +L + MK+ PD T L+ ++ G EA + E
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 613 E 613
E
Sbjct: 372 E 372
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
AL+M DEM I P + TF+ L+ + G + + F + + GL PD + +I
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
GYC R A++ + + F PD+ T +L+ L KEG ++A
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 495 GRNSDALDMLDEMILN-GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
G+ DAL ML+ M+ + PD T++ ++ + G + +++L +++ GL P+
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
Y L+ GYC A+++ E MK + LPD T +L+ L G +E + ++ +
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 614 EIK 616
+K
Sbjct: 338 SLK 340
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDI--------------------EAKRFGNVK--FSLM 141
T +AL + K G+ E + L D++ + RF + K F LM
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 142 ---------TLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAV 192
T++ + A+ VD +++ + A T +YN ++ E+ N A
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 193 RVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGF 252
+FQ MI G P+ +C I++ +++KL EA+E+F ++ + +I Y+I+I G
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 253 AGSKRFGEVGILVNEMQVDGIMP 275
+ E L + + G+ P
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEP 570
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G AL++L +M I PD+ +S ++ G + LF+ + + G+ P+ +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y +I+G+C+ R + A +L DM PD T L+ + KEGK EA E+ C
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA---EKLC 389
Query: 613 EEI 615
+E+
Sbjct: 390 DEM 392
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A D+ EMI +G+CPD T + L++ F ++ +LF +++ ++ D Y I+I
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
G C + AW LF + G PD T +++ + +A
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A ++++M+ G+ D+ T+ +++ +GD K+ L + + + ++PD +Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+I+ C + A LF +M G P+ T ++ G+ +A
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 24/210 (11%)
Query: 411 QRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKV------ 464
R+++ + + ++V L K+ G+R T ++I+ + AL +
Sbjct: 89 NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK 148
Query: 465 --FNNDRILCGPISNVNXXXXXXXXXXXXXKCGRN--SDALDMLDEMILNGICPDIQTFS 520
+ DR+ G + N C RN SDA+ ++D+M+ G PDI ++
Sbjct: 149 LGYEPDRVTIGSLVN--------------GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 521 GLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNS 580
++ + F + + G+ P+ Y L+ G CNS R + A +L DM
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 581 GFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
P+ T L+ + K GK EA + E
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFE 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R D + + EM G+ + T++ L+ F GD+ ++ F+ + G+ PD +
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y IL+ G C++ A +FEDM+ D T +++ + K GK +EA
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A ++ +EM+ I PDI T+S L++ I ++F ++ G D
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y LI G+C +KR KLF +M G + ++ T L++ ++ G +A
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R SDA +L +MI I P++ T+S L+ F G + ++LF + ++ ++PD Y
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKE 604
LI G C R A ++F+ M + G L D + L+ K KR E
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK-AKRVE 347
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G A + +M GI PDI T++ L+ + G+++ +F +++ ++ D Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
+I G C + + AW LF + G PD T ++ L +G E A+ ++
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 615 IKSPLPLALPGHSWTVSSADLT 636
L + T+S D+T
Sbjct: 499 ------EGLMKNDCTLSDGDIT 514
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 496 RNSDALDML-DEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
R+ D M+ +M+ +G+ P+I T++ L+ G ++ +F +++ +EP Y Y
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
I+IEG C + + W LF + G PD ++ ++G ++EA A+ E
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Query: 615 IKSPLP 620
PLP
Sbjct: 569 -DGPLP 573
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 10/233 (4%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNAD 459
Q G N+ T V+ L + G +L L++K+ A + +ID ++ D
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 460 AALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
AL +F G NV R SDA +L +MI I P++ TF
Sbjct: 278 DALNLFTEMENK-GVRPNVITYSSLISCLCNYE---RWSDASRLLSDMIERKINPNVVTF 333
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
+ L+ F G + KL+ + + ++PD + Y LI G+C R A +FE M +
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 580 SGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVSS 632
P+ T L+ K A ++E E + L G++ T ++
Sbjct: 394 KDCFPNVVTYNTLINGFCK------AKRIDEGVELFREMSQRGLVGNTVTYTT 440
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A + DEMI I PDI T+S L++ F + + +F ++ P+
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
Y LI G+C +KR +LF +M G + ++ T L+ ++
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T + L K+ R E L ++ + + TL+ ARD D+A V+ Q
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
D H +YN ++ + G +A+ VF+ + P + I++E + K+ K+
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMP 275
+ ++F + L +K Y+ +I GF E L +M+ DG +P
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 511 GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALA 570
GI ++ T++ L++ F I L + ++G EP L+ GYC+ KR + A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 571 WKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA-----VEESCE 613
L + M G+ PD+ T L+ L+ K EA A V+ C+
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 44/273 (16%)
Query: 377 VCKILRKLKSPETAWNFFCWVTNQPGFTHN----------------INTVQRVM------ 414
+ +++ KS A F W + PGF H+ +TV +++
Sbjct: 46 IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDS 105
Query: 415 -----------TLLARHGHSELVDKLISKI---RAEGMRLPFSTIRLIIDFYGLSKNADA 460
T++ G + L+ ++IS + G++ I+D + ++ D
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL-VKEDIDI 164
Query: 461 ALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFS 520
A + F + G +V + G D +L M +G+ P+ ++
Sbjct: 165 AREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIG---DGFKLLQIMKTSGVAPNAVVYN 221
Query: 521 GLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNS 580
L+H G + R L + ++ EP+ + ILI YCN ++ + L E +
Sbjct: 222 TLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSL 277
Query: 581 GFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
GF+PD T +++ L EG+ EA V E E
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR S+AL++L+ + G D+ + L+ + LG ++ ++ F + + G P+ Y
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
+LI GYC+ A F DMK + AT L++ L G+ + + E ++
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 10/259 (3%)
Query: 346 DPQALASALKNWSP--DEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPG- 402
D ++ +NWS D+ A E FV + V +++ E F W++++
Sbjct: 37 DTVSILKTQQNWSQILDDCFADEEVRFVDISPFV---FDRIQDVEIGVKLFDWLSSEKKD 93
Query: 403 -FTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
F N + LLAR+ ++ ++ +R E ++L + ++ Y S + A
Sbjct: 94 EFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKA 153
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
+++++ L + +V K R DA + DEM G D +
Sbjct: 154 VEIYDYVVELYDSVPDV---IACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI 210
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
L+ N G ++ RKL G P+ Y +I GYC A+ +F+++K G
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 582 FLPDSATKMLLVKSLWKEG 600
F+P T ++ KEG
Sbjct: 271 FMPTLETFGTMINGFCKEG 289
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A +L +M G PDI T+ L+H G + + + G+ PDA +Y +L+
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
G C + R A LF +M + LPD+ L+ + G EA V
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 14/205 (6%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDF-YGLSKNADA 460
GF + T ++ + G D+L+S+++ G+R+ + IID Y D
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 461 ALKV---FNNDRILCGP-ISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDI 516
A + ND C P ++ N K G+ A+ LDE G+ P+
Sbjct: 330 AESIGWIIAND---CKPDVATYNILINRLC------KEGKKEVAVGFLDEASKKGLIPNN 380
Query: 517 QTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFED 576
+++ L+ + + KL + + G +PD Y ILI G S A +
Sbjct: 381 LSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVK 440
Query: 577 MKNSGFLPDSATKMLLVKSLWKEGK 601
+ + G PD+A +L+ L K G+
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGR 465
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G +AL ++ M + PD T+S ++ + D+ T K+F + + +P+ Y
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
LI G+C +A + F++M+ +P+ T L++SL KE E A
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A ++ + MI + PD+ T+ L++ G + R++F ++ + G P+
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
+Y LI G+C SKR K+F +M G + ++ T +L++ G+ A V
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 613 EEIKSP 618
++P
Sbjct: 390 SSRRAP 395
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%)
Query: 504 LDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCN 563
L +M+ G PD+ TF+ L++ + + I+ LF + +G +P+ Y LI C
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 564 SKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
++ A +LF M +G P+ T LV L + G+ +AA
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G +A M M NG P+ ++ L+H F ++ K+F + Q G+ + Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
+LI+GYC R +A ++F M + PD T +L+ L GK ++A + E
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 393 FFCWVTNQPGFTH-NINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDF 451
FF W T++ + H + + ++ L + +L LI +++ + + T ++I
Sbjct: 136 FFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRR 195
Query: 452 YGLSKNADAALKVFNN-DRILCGP--------ISNVNXXXXXXXXXXXXXKCGRNSDALD 502
Y + A A+ FN + C P ISN++ R S+A
Sbjct: 196 YVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKR-------------RASEAQS 242
Query: 503 MLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYC 562
D + + PD+ ++ L+ + G+I K+F ++ G+EP+ Y Y I+I+ C
Sbjct: 243 FFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC 301
Query: 563 NSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+ + A +F DM +SG P++ T L++ K G+ ++ V
Sbjct: 302 RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+CG+ S A D+ +M+ +G P+ TF+ LM G + V +++ ++++G EPD
Sbjct: 302 RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI 361
Query: 553 LYKILIEGYCNSKRAALAWKLFEDM 577
Y LIE +C + A K+ M
Sbjct: 362 TYNFLIEAHCRDENLENAVKVLNTM 386
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 143 LLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEG 202
++ R D A + D + N E++ +++ V G +EAV F RM D G
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216
Query: 203 SLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVG 262
+P+ + +I++ +L + ++ +EA F+ + R + Y+ L+ G+ + E
Sbjct: 217 CVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAE 275
Query: 263 ILVNEMQVDGIMPS 276
+ EM++ GI P+
Sbjct: 276 KVFKEMKLAGIEPN 289
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+C R S AL +L +M+ G P I TF L+H F + I L ++ + G EP+
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+Y LI+G C + +A +L +M+ G D T L+ L G+ +AA
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR SDA ML +M+ I PD+ TF+ L+ F G++ ++L+ + Q ++P+ Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
+I G C R A K F+ M + G P+ T L+ K
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ ALD+ M+ + PDI T L+H G+I++ F +R+ Y
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
I+I G C + + AW+LF + G PD+ T +++ L K G R+EA
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
S A + DEM+ D+ ++ L+ GD+ K+F + +GL+PDAY + I
Sbjct: 225 SGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIF 284
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
I YC++ A+K+ + MK +P+ T ++K+L K K +A
Sbjct: 285 IHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
DA +LDEMI G PD T++ +M Y + ++ KL + + + PD + Y +++
Sbjct: 331 DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL 390
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLW-KEGKRKEAAAVEESCEEIKS 617
+ R A +++E M F P AT +++ L K+GK +EE+C +
Sbjct: 391 KLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGK------LEEACRYFEM 444
Query: 618 PLPLALPGHSWTV 630
+ +P +S TV
Sbjct: 445 MIDEGIPPYSTTV 457
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 79/187 (42%), Gaps = 4/187 (2%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G ++ + +++ L H + K + G+ T +++ + ++A A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
KVF D +L + V K G M EM G+ PD +F+
Sbjct: 228 RKVF--DEML--ERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
+H + + GD+ + K+ +++ L P+ Y + +I+ C +++ A+ L ++M G
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 582 FLPDSAT 588
PD+ T
Sbjct: 344 ANPDTWT 350
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 7/235 (2%)
Query: 381 LRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRL 440
+ KL T W F+ + + GF N+ +M + G+ K+ +I ++
Sbjct: 215 MMKLNPTGTIWGFYMEILDA-GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQP 273
Query: 441 PFSTIRLIIDFYGLSKNADAALKVFNN-DRILCGPISNVNXXXXXXXXXXXXXKCGRNSD 499
+ +I+ Y N D ++ + ++ P K +
Sbjct: 274 TVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRP-----DVFTYSALINALCKENKMDG 328
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A + DEM G+ P+ F+ L+H + G+I +++ + + GL+PD LY L+
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
G+C + A + + M G PD T L+ + G + A + + ++
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ 443
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A +++D MI G+ PD T++ L+ F GD++T ++ + Q G+E D + L+
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
G C R A + +M +G PD T +++ + K+G
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR DA L EM+ GI PD T++ +M F GD +T KL ++ G P
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y +L+ G C + A L + M N G +PD T L+ EG + A
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL-----EGHHRHA 569
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
AL++ EM NGI D FS L+ G + + + + G++PD Y ++++
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+C A +KL ++M++ G +P T +L+ L K G+ K A
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 496 RNSDALDMLDE----MILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
RN + +D++ E M+ G+ PDI ++ L++ F GD+ R + + + GL PD
Sbjct: 357 RNGE-IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y LI+G+C A ++ ++M +G D LV + KEG+ +A
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 11/238 (4%)
Query: 377 VCKILRKLKSPETAWNFFCWVTNQ-PGFTHNINTVQRVMTLLARHGHSELVDKLISKIRA 435
V + L K + E A F C+ Q G + T +M L G ++ +
Sbjct: 249 VIQYLAKAEKLEVA--FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEK 306
Query: 436 EGMRLPFSTIRLIIDFYGLSKNADAALKVFNN--DRILCGPISNVNXXXXXXXXXXXXXK 493
L ST LII S DAA K+F +R L S + K
Sbjct: 307 TDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFS------SLVDSMGK 360
Query: 494 CGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
GR ++ + EM G P F L+ +A G + T +L+ +++ G P+ L
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEES 611
Y ++IE + S + +A +F+DM+ +GFLP +T L++ G+ A + S
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNS 478
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 137/358 (38%), Gaps = 64/358 (17%)
Query: 342 KPWLDPQALASALK-----NWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCW 396
KP+++ ++A ++ W P+ + L+ FV + + L+ +K + A + F W
Sbjct: 135 KPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRW 194
Query: 397 VTNQPGF-----------------------------------TH---NINTVQRVMTLLA 418
QP + +H + N +V+ LA
Sbjct: 195 AKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLA 254
Query: 419 RHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNN----DRILCGP 474
+ E+ K + G ++ T ++ + A +++ + D +L G
Sbjct: 255 KAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGS 314
Query: 475 ISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKT 534
+ K GR A + +M + P FS L+ G + T
Sbjct: 315 TYEL--------IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDT 366
Query: 535 VRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK 594
K++ ++ G P A ++ LI+ Y + + A +L+++MK SGF P+ ++++
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 595 SLWKEGKRKEAAAVEESCEEIKS-PLP------LALPGHSWTVSSADLTRVYNIYSNS 645
S K GK + A V + E+ P P L + S V SA ++YN +N+
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSA--MKIYNSMTNA 482
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 81/189 (42%), Gaps = 4/189 (2%)
Query: 408 NTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNN 467
+T + ++ LA+ G + KL +++ +R FS ++D G + D ++KV+
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME 373
Query: 468 DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFA 527
+ + K G+ AL + DEM +G P+ ++ ++ A
Sbjct: 374 MQ----GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHA 429
Query: 528 NLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSA 587
G ++ +F + + G P Y L+E + S + A K++ M N+G P +
Sbjct: 430 KSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLS 489
Query: 588 TKMLLVKSL 596
+ + L+ L
Sbjct: 490 SYISLLTLL 498
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 494 CGRNSD---ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPD 550
C N D A DEM+ G+ P T++ L+H I+ L +R+ G+ D
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 551 AYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ Y ILI GYC A A+ L ++M G P T L+ L ++ K +EA
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G A + DEM+ +GI P T++ L++ + +LF V G++PD +
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
L++G+C A+ L ++M PD T L++ L EGK +EA
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G A +L EM + I PD T++ LM G + R+L +++ G++PD Y
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
LI GY A+ + ++M + GF P T L+K L K +E EE E
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL---SKNQEGELAEELLRE 597
Query: 615 IKS 617
+KS
Sbjct: 598 MKS 600
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 4/187 (2%)
Query: 424 ELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXX 483
E + LI +IR +G+ L T ++I+ G ++ DA +D ++ I
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILIN--GYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Query: 484 XXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVR 543
R +D ++ ++++ G+ PD+ + LM +G++ L +
Sbjct: 437 SLIYVLCRKNKTREAD--ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Query: 544 QIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRK 603
+ + PD Y L+ G C + A +L +MK G PD + L+ K+G K
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Query: 604 EAAAVEE 610
A V +
Sbjct: 555 HAFMVRD 561
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ A L M + GI P I T++ L+ F+ G I+ R + + ++ G +PD
Sbjct: 237 KEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQ 296
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA 607
Y ++ CN RA+ ++ +MK G +PDS + +L++ G + A A
Sbjct: 297 TYNPILSWMCNEGRAS---EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 506 EMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSK 565
+M+ +G+ P+I T++ L+ G ++ +F +++ +EPD Y Y I+ EG C +
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 566 RAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLP 620
+ W LF + G PD ++ K+G ++EA + +E PLP
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE-DGPLP 553
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR SDA +L +M+ I P++ TF+ L+ FA G + KLF + Q ++P+ Y
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
LI G+C R A ++F M + LPD T L+ K K
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A + DEMI I P+I T++ L++ F + +++FT++ PD
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y LI G+C +K+ +LF DM G + ++ T L+ ++ A V
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
PDI T++ + G ++ LF + G++PD Y +I G+C A+ L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 574 FEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKS 617
F MK G LPDS T L+++ ++G + AA E +E++S
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDK---AASAELIKEMRS 583
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ S+A+ +++ M++ G PD+ T+ +++ G+ L + + +E D +Y
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I+ C + A LF +M N G PD T L+ L G+ +A+
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
D +++ +M G+ + T++ L+H F D + +F + G+ P+ Y L+
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+G C + + A +FE ++ S PD T ++ + + K GK ++
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR +AL++ ++ PD+ + ++ +AN G K K+F + G+ P+AY
Sbjct: 209 KDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAY 268
Query: 553 LYKILIEGY-CNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y +LI+G + K A K +M +G P++AT + ++ +EGK + A
Sbjct: 269 TYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
S AL + + M +G+ P++ TF+ L+H F ++ K+F ++ + + P+ Y L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
I GY +A++ +EDM +G D T L+ L K+ K ++AA
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
S AL + + M +G+ P++ TF+ L+H F ++ K+F ++ + + P+ Y L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
I GY +A++ +EDM +G D T L+ L K+ K ++AA
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 6/154 (3%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A + +EM+ P++ TF LM G +K+F + G+ P+ Y ILI
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPL 619
G C A A KLF +M+ SG PDS L+ K G+ EA + E K
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFE--KDGF 299
Query: 620 PLALPGHSWTVS----SADLTRVYNIYSNSFASN 649
L L G+S + + T+ + +Y+N N
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR SDA M D+M GI P+ T++ L+ G RKLF ++ G PD+
Sbjct: 210 KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSV 269
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ L++G+C R A++L + GF+ L+ L++ + +A
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ DAL +L M GI PD ++ ++ G ++ R L + + PDA
Sbjct: 350 KAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDAC 409
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ ILI C + A ++F +++ SG P AT L+ L K G+ KEA
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R + A ++ M+ I PDI ++ L+ + G I+ KL + + G+ PD Y Y
Sbjct: 318 RYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYN 377
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+I+ C L +M + PD+ T +L+ S+ + G +EA +
Sbjct: 378 AVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR +DA L EM I P++ TFS L+ +A G + V ++ M+ Q+ ++P+ +
Sbjct: 95 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 154
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
Y LI G C R A K+ + M + G P+ T L +K +
Sbjct: 155 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 203
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +A+ MLD MI G P++ T+S L + F + KL + Q G+ +
Sbjct: 168 RVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCN 227
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
LI+GY + + LA +F M ++G +P+ + +++ L+ G+ ++A + E ++
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKT 287
Query: 616 KSPLPL 621
++ L +
Sbjct: 288 RNDLDI 293
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
+ +D+++E G+ PD+ TFS LM+ ++++GD+K +++T + + G++PD + + IL
Sbjct: 586 GEVVDLMEEF---GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+GY + A ++ M+ G P+ ++ G+ K+A V
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV 693
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 41/215 (19%)
Query: 387 PETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIR 446
P+ A + F + + G ++ T ++T L R H + LISK+ G++
Sbjct: 335 PQEAHSIFNTLIEE-GHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFN 393
Query: 447 LIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDE 506
II+ S N D A+K+F ++
Sbjct: 394 AIINASSESGNLDQAMKIF---------------------------------------EK 414
Query: 507 MILNGICPDIQTFSGLMHYFANLGDIK-TVRKLFTMVRQIGLEPDAYLYKILIEGYCNSK 565
M +G P TF+ L+ + +G ++ + R L M+R L+P+ IL++ +CN +
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 566 RAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
+ AW + M++ G PD T L K+ + G
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A + + +I G P + T++ L+ ++ L + V + GL+PD L+
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I S A K+FE MK SG P ++T L+K K GK +E++
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
PDI T++ L+H G K ++ ++ G EPD Y+ILI+G C S R A ++
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 574 FEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWT 629
+ +M+ +GF+PD+ L+ K A V E+C+ + + + WT
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLK------ARKVTEACQLFEKMVQEGVRASCWT 396
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R DA+ + EM NG PD ++ L+ + +LF + Q G+ +
Sbjct: 336 KSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCW 395
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y ILI+G + RA + LF D+K G D+ T ++ L +EGK + A + E
Sbjct: 396 TYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Query: 613 E 613
E
Sbjct: 456 E 456
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 139 SLMTLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRM 198
SL+ +L A+D AL VWD+ ++ +Y +++ C + +A+R++ M
Sbjct: 294 SLIHVLCLFGKAKD---ALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM 350
Query: 199 IDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRF 258
G +P+ +++ +K++K+ EA ++F M ++ + Y+ILI+G + R
Sbjct: 351 QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Query: 259 GEVGILVNEMQVDG-IMPSREVSLSLQQMQEEGLLKGVDEFLREL 302
L +++ G + + S+ Q+ EG L+G + + E+
Sbjct: 411 EAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 494 CGRNS--DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
CG+ +A LDEM+ G+ PD T+S L+ N+ ++ + + ++ G+ PD
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y Y ++I+G C ++R + F++M + P++ L+++ + G+ A + E
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+A+ D+ NG+ PD+ T+S ++ + ++ F + ++P+ +Y LI
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
YC S R ++A +L EDMK+ G P+SAT L+K + + +EA + E
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR S AL++ ++M GI P+ T++ L+ + + ++ + LF +R GLEP+ + Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
LI+GY + L +M + P+ T +++ ++G EA+
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +A + +EM + G+ P++ ++ L+ + LG + V L + + P+ Y
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
++I GY A +L +M+ G +PDS T + K+G EA
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G++S AL++ + + G D +T + L+H G + ++ + G D
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y LI G C K+ A+ ++M G PD+ T +L+ L+ K +EA + C
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 613 E 613
+
Sbjct: 602 K 602
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 494 CGRNS--DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
CG+ +A LDEM+ G+ PD T+S L+ N+ ++ + + ++ G+ PD
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y Y ++I+G C ++R + F++M + P++ L+++ + G+ A + E
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+A+ D+ NG+ PD+ T+S ++ + ++ F + ++P+ +Y LI
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
YC S R ++A +L EDMK+ G P+SAT L+K + + +EA + E
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR S AL++ ++M GI P+ T++ L+ + + ++ + LF +R GLEP+ + Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
LI+GY + L +M + P+ T +++ ++G EA+
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +A + +EM + G+ P++ ++ L+ + LG + V L + + P+ Y
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
++I GY A +L +M+ G +PDS T + K+G EA
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G++S AL++ + + G D +T + L+H G + ++ + G D
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y LI G C K+ A+ ++M G PD+ T +L+ L+ K +EA + C
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 613 E 613
+
Sbjct: 602 K 602
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 495 GRNSDALDMLDEMILN-GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
GR DA +L +M+ + GI PD+ T++ L++ + G + ++ +R G +P+ Y
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y IL++G+C + A+ + +M G P++ L+ + KE + EA +
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A ++L+EM +G+ P+ F+ L+ F I ++F + + G +PD Y
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ LI G C A L DM + G + ++ T L+ + + G+ KEA
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
AL +L +MI G+ + T++ L++ F G+IK RKL + G D Y LI+
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
G C + A LFE M G P + + +L+ L + G +EA ++
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ G +A++ EM+L G PDI TF+ L++ G I+ +F ++ G+ PD
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSL 596
+ L+ C A L ++ GF+P+ T +L++S+
Sbjct: 671 TFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%)
Query: 511 GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALA 570
GI P+ TF+ L + F N + + V + + G EPD Y L+ YC R A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 571 WKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ L++ M +PD T L+K L K+G+ +EA
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A + M + PD+ T++ L+ G ++ + F + G++PD Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
LI YC + KL +M + +PD T ++V+ +EG+ A
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 615 IKSPLPLAL 623
+K +P +
Sbjct: 405 LKVDIPFEV 413
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%)
Query: 502 DMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGY 561
D L++M G PD+ T++ L+ + G +K L+ ++ + + PD Y LI+G
Sbjct: 257 DFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGL 316
Query: 562 CNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
C R A + F M + G PD + L+ + KEG +++
Sbjct: 317 CKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQS 360
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A+ L EM G+ D+ ++ L+ F + G++ + LF V + G P A
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y LI G+C + A ++FE M G P+ T L+ L GK KEA
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A ++ + MI G+ P++ T++GL+ +G K +L ++ + EP+A
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y I+I C A A ++ E MK PD+ T +L+ L +G EA+ +
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 494 CGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
CG + DE++ G P T++ L+ F LG +K ++F + + G+ P+ Y
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y LI+G C + A +L M P++ T +++ L K+G +A + E
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 409 TVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNND 468
T ++ R G S+ +I + +G+ T +ID YG + D ALK+F +
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 469 RILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFAN 528
+ G + N K R+++ + ML +M NG P+ T++ ++ N
Sbjct: 413 K-EAGCVPNT---CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN 468
Query: 529 LGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSAT 588
G K V ++F ++ G EPD + LI Y A K++ +M +GF T
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 589 KMLLVKSLWKEG 600
L+ +L ++G
Sbjct: 529 YNALLNALARKG 540
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 3/212 (1%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T + + A+ G E K ++++ + + LLQ A AL V +
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
++ A + +YN ++A V G EA V + M +G +PN + T +++ K+ K
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVSLSL 283
EA+++F M Y+ ++ R E+ ++ +M+ +G P+R ++
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 284 QQMQEEGLLKGVDEFLRELLRDEGNQGIKNVR 315
+ KG+D+F+ + R+ + G + R
Sbjct: 463 LALCGN---KGMDKFVNRVFREMKSCGFEPDR 491
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G ++AL +L EM N D T++ L+ + G K + M+ + G+ P+A
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKE 604
Y +I+ Y + + A KLF MK +G +P++ T ++ L K+ + E
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
AL ++M GI PD TF+ +++ F + KLF ++ + P Y +I+
Sbjct: 274 ALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK 333
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
GY R ++FE+M++SG P++ T L+ L GK EA +
Sbjct: 334 GYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 18/230 (7%)
Query: 372 WTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLAR-----HGHSELV 426
W LV +L K E A FF W H+ +T +++ +L H L+
Sbjct: 115 WDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILL 174
Query: 427 DKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILC--GPISNVNXXXXX 484
D + +G+ ++I+ YG + ++K+F + L I + N
Sbjct: 175 D-----MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKV 229
Query: 485 XXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQ 544
+ GR A ++M+ G+ P T++ ++ F ++T + F ++
Sbjct: 230 IL------RRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKT 283
Query: 545 IGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK 594
G+ PD + +I G+C K+ A KLF +MK + P + ++K
Sbjct: 284 RGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK 333
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 493 KCGRNSDALDMLDEMILN-GIC-PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPD 550
K G++S ALD+ + M C PD+ TF+ +MH ++ G+I+ R +F + GL+P+
Sbjct: 295 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 354
Query: 551 AYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKE---GKRKE 604
Y L+ Y + A + D+K +G +PD + L+ S + GK KE
Sbjct: 355 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 85/202 (42%), Gaps = 4/202 (1%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNAD 459
Q G N+ +V ++ +R VD ++S ++ G+ L + I Y + +
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 460 AALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
A+ ++ + R +V + + +A+ L EM I + +
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSC----RMSKYPEAISYLKEMEDLSIPLTKEVY 568
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
S ++ ++ G + +F ++ G EPD Y ++ Y S++ A +LF +M+
Sbjct: 569 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Query: 580 SGFLPDSATKMLLVKSLWKEGK 601
+G PDS L+++ K G+
Sbjct: 629 NGIEPDSIACSALMRAFNKGGQ 650
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 493 KCGRNSDALDMLDEMILN-GIC-PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPD 550
K G++S ALD+ + M C PD+ TF+ +MH ++ G+I+ R +F + GL+P+
Sbjct: 163 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 222
Query: 551 AYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKE---GKRKE 604
Y L+ Y + A + D+K +G +PD + L+ S + GK KE
Sbjct: 223 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 10/222 (4%)
Query: 383 KLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPF 442
K + + A+ FF W Q F H N +M + A G + + +LI ++ +G
Sbjct: 128 KTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTA 187
Query: 443 STIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALD 502
T L+I G + A ++ F + N + +D
Sbjct: 188 CTFNLLICTCGEAGLARDVVEQFIKSKTF-----NYRPYKHSYNAILHSLLGVKQYKLID 242
Query: 503 -MLDEMILNGICPDIQTFSGLMHYFAN--LGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
+ ++M+ +G PD+ T++ +M FAN LG + +L + + G PD Y Y IL+
Sbjct: 243 WVYEQMLEDGFTPDVLTYNIVM--FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
+ A L M+ G P L+ L + GK
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 342
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Query: 396 WVTNQ---PGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFY 452
WV Q GFT ++ T VM R G ++ + +L+ ++ +G T +++
Sbjct: 243 WVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHL 302
Query: 453 GLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGI 512
AAL + N+ R + + G+ +DE + G
Sbjct: 303 ATGNKPLAALNLLNHMR----EVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGC 358
Query: 513 CPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWK 572
PD+ ++ ++ + + G+++ ++F + + G P+ + Y +I G+C + + A
Sbjct: 359 TPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACA 418
Query: 573 LFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
L ++M++ G P+ LV +L GK EA V
Sbjct: 419 LLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEV 454
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 496 RNSD---ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+N+D A+ M M G P+ T+ LM +F+ DI+ KLF +++ G+ P
Sbjct: 683 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y I+I+G C R A +F ++ LPD +L++ K G+ EAA + E
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G + A + M+ GI P++ T++ L+ G I ++ + + G+EP
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
Y LI+G+C + L+EDM G+ PD +LV L K+G
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +AL + M + GI PD+ TF+ +M G ++ LF + ++GLEPDA Y
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
LI+ +C + + +LF+ M+ + D A +++ L+K + ++A+
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 472 CGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGD 531
CGP NV K G A D+ M GI PD+ +S L+ + G
Sbjct: 280 CGPAPNV---VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 532 IKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKML 591
+ KLF+ G++ D ++ I+ Y S A A +++ M G P+ T +
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 592 LVKSLWKEGKRKEA 605
L+K L ++G+ EA
Sbjct: 397 LIKGLCQDGRIYEA 410
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
L + D M N I DI + ++H I+ K F + + +EPD Y +I
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
GYC+ +R A ++FE +K + F P++ T +L+ L K
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 21/206 (10%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G ++ T V+ L + G +L L++K+ + IID K+ D A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 462 LKVFNN--------DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGIC 513
+FN D P+ + GR SDA +L +M+ I
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISC------------LCNYGRWSDASRLLSDMLEKNIN 317
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLF-TMVRQIGLEPDAYLYKILIEGYCNSKRAALAWK 572
PD+ F+ L+ F G + KL+ MV+ PD Y LI+G+C KR +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 573 LFEDMKNSGFLPDSATKMLLVKSLWK 598
+F +M G + ++ T L+ ++
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQ 403
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 496 RNSDALDML-DEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
R+ D M+ +M+ +G+ PDI T++ L+ N G+++T +F +++ ++ D Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
+IE C + + W LF + G P+ T ++ ++G ++EA A+ +E
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 615 IKSPLP 620
PLP
Sbjct: 525 -DGPLP 529
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 142 TLLQWHAAARDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDE 201
TL+ ARD D+A V+ Q D H +YN+++ GN A+ VF+ M
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 202 GSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEV 261
+ + T ++E L K+ K+ + ++F + L +K Y+ ++ GF E
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 262 GILVNEMQVDGIMPS 276
L EM+ DG +P+
Sbjct: 516 DALFVEMKEDGPLPN 530
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R + +++ EM G+ + T++ L+H F D + +F + G+ PD Y
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
IL++G CN+ A +FE M+ D T ++++L K GK ++
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ S+A+ +++ M++ G PD+ T+ +++ G+ L + + +E D +Y
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I+G C K A+ LF M+ G PD T L+ L G+ +A+
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 511 GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALA 570
GI ++ T+S ++YF + + + ++G P L+ G+C+ R + A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 571 WKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
L + M G+ PD+ T LV L++ K EA A+ E
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
DA D+ ++M GI PD+ T++ L+ N G +L + + + + PD + LI
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 559 EGYCNSKRAALAWKLFEDM-KNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKS 617
+ + + A KL+++M K+ PD L+K K + VEE E +
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR------VEEGMEVFRE 381
Query: 618 PLPLALPGHSWTVSS 632
L G++ T ++
Sbjct: 382 MSQRGLVGNTVTYTT 396
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 10/233 (4%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNAD 459
Q G ++ T V+ L + G ++L L++K+ A + +ID ++ D
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 460 AALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
AL +F G NV GR SDA +L +MI I P++ TF
Sbjct: 271 DALNLFTEMENK-GVRPNV---ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
S L+ F G + KL+ + + ++P+ + Y LI G+C R A ++ E M
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 580 SGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVSS 632
LP+ T L+ K A V++ E + L G++ T ++
Sbjct: 387 KDCLPNVVTYNTLINGFCK------AKRVDKGMELFREMSQRGLVGNTVTYTT 433
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R +++ EM G+ + T++ L+H F D + +F + +G+ P+
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRK 603
Y IL++G C + + A A +FE ++ S PD T ++++ + K GK K
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ A + +EMI I P+I T+S L++ F L + +++ ++ + P+
Sbjct: 335 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
Y LI G+C +KR +LF +M G + ++ T L+ ++
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ S+A+ ++D M+ G PD+ T+ +++ GD L + +E + +Y
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I+ C + A LF +M+N G P+ T L+ L G+ +A+
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 7/258 (2%)
Query: 353 ALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQR 412
AL + E + +E +++T V L K + + A N F + N+ G N+ T
Sbjct: 237 ALNLLNKMEAAKIEANVVIYST--VIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSS 293
Query: 413 VMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILC 472
+++ L +G +L+S + + T +ID + A K++ + I
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE-EMIKR 352
Query: 473 GPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDI 532
N+ + G +A ML+ MI P++ T++ L++ F +
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLG---EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 533 KTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLL 592
+LF + Q GL + Y LI G+ ++ A +F+ M + G P+ T +L
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Query: 593 VKSLWKEGKRKEAAAVEE 610
+ L K GK +A V E
Sbjct: 470 LDGLCKNGKLAKAMVVFE 487
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G + N+ T +M L ++ + ++ +++ +G++L +ID + N ++A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 462 LKVFNNDRIL------CGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPD 515
+F+ +L PI N G ALD+ +M+ +G+ D
Sbjct: 674 SALFS--ELLEEGLNPSQPIYN--------SLISGFRNLGNMVAALDLYKKMLKDGLRCD 723
Query: 516 IQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFE 575
+ T++ L+ G++ +L+T ++ +GL PD +Y +++ G + K+FE
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783
Query: 576 DMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+MK + P+ ++ ++EG EA
Sbjct: 784 EMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 10/233 (4%)
Query: 400 QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNAD 459
Q G ++ T V+ L + G +L L++K+ A ++ IID ++ +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 460 AALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
A+ +F G NV GR SDA +L M+ I P++ TF
Sbjct: 276 VAVDLFTEMETK-GIRPNV---VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
+ L+ F G + KL + Q ++PD Y +LI G+C R A ++F+ M +
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 580 SGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVSS 632
LP+ T L+ K VE+ E + L G++ T ++
Sbjct: 392 KDCLPNIQTYNTLINGFCK------CKRVEDGVELFREMSQRGLVGNTVTYTT 438
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 505 DEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNS 564
++M GI D+ T+S ++ F + + + ++G EPD L+ GYC+S
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 565 KRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA-----VEESCE 613
KR + A L + M G+ PD+ T L+ L+ K EA A V+ C+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ 220
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 38/171 (22%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ G A + +M+ N + DI T+S L+H + G + T +F +++ +E + +
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 553 LYKILIEGYCNSKRAALAW--------------------------------KLFEDMKNS 580
+Y +IEG C + + AW LF MK
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 581 GFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPLPLALPGHSWTVS 631
G LP+S T L+++ ++ R AA E +E++S G + T+S
Sbjct: 565 GTLPNSGTYNTLIRANLRDCDR---AASAELIKEMRSS---GFVGDASTIS 609
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
+ S+A+ ++D+M+ G PD+ T+ +++ GDI L + ++ + ++
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
+I+ C + +A LF +M+ G P+ T L+ L G+ +A+
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A + +EMI I PD T++ L++ F + +++F + P+
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y LI G+C KR +LF +M G + ++ T +++ ++ G A V
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 494 CGRNS--DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
C +N+ +ML +M G PD T++ L+ +F D ++V ++ +R+ GL+P
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMK-NSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y +I+ YC+ A KLF+DM +S P++ +L+ + K G +A +++E
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 17/236 (7%)
Query: 369 NFVWTTRLVCKILRKLKSPETAWNFFCWVTNQ------PGFTHNINTVQRVMTLLARHGH 422
N VW TR + + + ++ TAW+ + P F +++ L R+
Sbjct: 258 NSVWLTRFISSLCKNARA-NTAWDILSDLMKNKTPLEAPPFNA-------LLSCLGRNMD 309
Query: 423 SELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXX 482
++ L+ K+ +R T+ ++I+ S+ D AL+VF R NV
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD 369
Query: 483 XXXXXXXXXXKC--GRNSDALDMLDEMILNGIC-PDIQTFSGLMHYFANLGDIKTVRKLF 539
C GR +A ++L M L C P+ T++ L+ + G ++T +++
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 540 TMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
+ +++ ++P+ ++ G C +A F DM+ G + T M L+ +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 8/206 (3%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G ++ T R++ + G + +++++ +G++ S+ L+I + +D
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 462 LKVFN--NDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTF 519
KV DR + +S N K ++ +A +LD M+ G+ P+ T+
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLC------KRKKSKEAKALLDGMLSAGMKPNTVTY 295
Query: 520 SGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKN 579
S L+H F N D + +KLF ++ G +PD+ Y LI C A L ++
Sbjct: 296 SHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESME 355
Query: 580 SGFLPDSATKMLLVKSLWKEGKRKEA 605
++P + LV L K+ K +EA
Sbjct: 356 KNWVPSFSIMKSLVNGLAKDSKVEEA 381
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 494 CGRNS--DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
C +N+ +ML +M G PD T++ L+ +F D ++V ++ +R+ GL+P
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMK-NSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y +I+ YC+ A KLF+DM +S P++ +L+ + K G +A +++E
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 98/236 (41%), Gaps = 17/236 (7%)
Query: 369 NFVWTTRLVCKILRKLKSPETAWNFFCWVTNQ------PGFTHNINTVQRVMTLLARHGH 422
N VW TR + + + ++ AW+ + P F +++ L R+
Sbjct: 258 NSVWLTRFISSLCKNARA-NAAWDILSDLMKNKTPLEAPPFNA-------LLSCLGRNMD 309
Query: 423 SELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXX 482
++ L+ K+ +R T+ ++I+ S+ D AL+VF R NV
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKAD 369
Query: 483 XXXXXXXXXXKC--GRNSDALDMLDEMILNGIC-PDIQTFSGLMHYFANLGDIKTVRKLF 539
C GR +A ++L M L C P+ T++ L+ + G ++T +++
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 540 TMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
+ +++ ++P+ ++ G C +A F DM+ G + T M L+ +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 494 CGRNS--DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
C +N+ +ML +M G PD T++ L+ +F D ++V ++ +R+ GL+P
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMK-NSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y +I+ YC+ A KLF+DM +S P++ +L+ + K G +A +++E
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 17/236 (7%)
Query: 369 NFVWTTRLVCKILRKLKSPETAWNFFCWVTNQ------PGFTHNINTVQRVMTLLARHGH 422
N VW TR + + + ++ TAW+ + P F +++ L R+
Sbjct: 258 NSVWLTRFISSLCKNARA-NTAWDILSDLMKNKTPLEAPPFNA-------LLSCLGRNMD 309
Query: 423 SELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXX 482
++ L+ K+ +R T+ ++I+ S+ D AL+VF R NV
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD 369
Query: 483 XXXXXXXXXXKC--GRNSDALDMLDEMILNGIC-PDIQTFSGLMHYFANLGDIKTVRKLF 539
C GR +A ++L M L C P+ T++ L+ + G ++T +++
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 540 TMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
+ +++ ++P+ ++ G C +A F DM+ G + T M L+ +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 96/260 (36%), Gaps = 41/260 (15%)
Query: 348 QALASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPE--TAWNFFCWVTNQPGFTH 405
+ L L+ + + L AN + + ++LR+ + + FF W H
Sbjct: 34 ERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRH 93
Query: 406 NINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVF 465
+ + +L +L+ +I R E + T+R+++ + AD AL V
Sbjct: 94 SAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVL 153
Query: 466 NNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHY 525
P NV C D ++ ++
Sbjct: 154 RK-----FPEFNV----------------------------------CADTVAYNLVIRL 174
Query: 526 FANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPD 585
FA+ GD+ L + +GL PD Y +I GYCN+ + AW+L ++M + +
Sbjct: 175 FADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLN 234
Query: 586 SATKMLLVKSLWKEGKRKEA 605
S T +++ + K G + A
Sbjct: 235 SVTYSRILEGVCKSGDMERA 254
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 499 DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILI 558
+A D++ +M G+ PDI T++ + + GD+ + + +G++P+ Y LI
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 559 EGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA---AAVEESCEEI 615
+G+ + A +E+MK G PD A L+ SL EA + V C+E+
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEM 866
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 444 TIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDM 503
T II Y S + +L+VF+ R CG + V+ + + A+++
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMR-RCGCVPTVHTFNGLINGLVEKRQMEK---AVEI 646
Query: 504 LDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCN 563
LDEM L G+ + T++ +M +A++GD + FT ++ GL+ D + Y+ L++ C
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 564 SKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
S R A + ++M +S +L+ + G EAA
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 4/185 (2%)
Query: 424 ELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXX 483
E + L+ ++ EG+ P + ++D Y + + L VF + CG V
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK-ECGFTPTV---VT 486
Query: 484 XXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVR 543
K G+ S AL++ M G+ +++T+S +++ F L D +F +
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 544 QIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRK 603
+ G++PD LY +I +C A + ++M+ P + T M ++ K G +
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 604 EAAAV 608
+ V
Sbjct: 607 RSLEV 611
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 151 RDVDSALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSC 210
R ++ A+ + D+ L A +Y +M +G+ +A F R+ +EG + +
Sbjct: 638 RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 211 TIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQV 270
+++ KS ++ A+ V M I R Y+ILI+G+A E L+ +M+
Sbjct: 698 EALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 271 DGIMP 275
+G+ P
Sbjct: 758 EGVKP 762
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 409 TVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFY---GLSKNADAALKVF 465
T ++ + G +++ + + +G+ L T +ID G +++A L+
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 466 NNDRILCGPIS-NVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMH 524
RIL P S NV K + + L ML ++ G+ P + T++ L+
Sbjct: 538 VKMRILTTPHSLNV--------ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589
Query: 525 YFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLP 584
GDI ++ +++ G P+ Y Y I+I G C R A KL M++SG P
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Query: 585 DSATKMLLVKSLWKEGKRKEA 605
+ T ++VK GK A
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRA 670
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ A+ +L M+ NG+ PDI +++ L+ G + T KL + + +EPD +
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEES 611
+I +C +A +A M G D T L+ + K GK ++A + E+
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 11/216 (5%)
Query: 392 NFFCWVT----NQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRL 447
F +VT GF + + ++ L ++G++E + +SKI G L
Sbjct: 176 GFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTS 235
Query: 448 IIDFYGLSKNADAALKVFN--NDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLD 505
++ + N ALKVF+ + + C P S + GR +A + D
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNS-----VSYSILIHGLCEVGRLEEAFGLKD 290
Query: 506 EMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSK 565
+M G P +T++ L+ + G I LF + G +P+ + Y +LI+G C
Sbjct: 291 QMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Query: 566 RAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
+ A + M P T L+ K+G+
Sbjct: 351 KIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR A ++L M P+++TF+ LM +G L + GL PD Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA 607
+LI+G C A+KL M PD T ++ + K+GK A+A
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 499 DALDMLDEMILNGIC-PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
DAL + D M C P+ ++S L+H +G ++ L + + G +P Y +L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
I+ C+ A+ LF++M G P+ T +L+ L ++GK +EA V
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 175/422 (41%), Gaps = 42/422 (9%)
Query: 186 GND-AEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQ 244
GN+ +A+ +F RM +EG P+ ++++E K+ ++ +A+E + M +RI +
Sbjct: 358 GNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVL 417
Query: 245 YSILIEG-FAGSKRFGEVGILVNEMQ---VDGIMPSREVSLSLQQMQEEGLLKGVDEFLR 300
+I+G + I + + G M ++ L +Q G + FL+
Sbjct: 418 VHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQ----GKVDAATSFLK 473
Query: 301 ELLRDEGNQGIK-NVRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDPQALASALKNWSP 359
+ + +GI+ NV + NN+ H + + LA ++ +S
Sbjct: 474 MMEQ----KGIEPNVVF----------------YNNMMLAHCR--MKNMDLARSI--FSE 509
Query: 360 DEVSALEGANFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLAR 419
LE NF ++ ++ K K + AW+ + N F N ++ L +
Sbjct: 510 MLEKGLEPNNFTYS--ILIDGFFKNKDEQNAWDVINQM-NASNFEANEVIYNTIINGLCK 566
Query: 420 HGHSELVDKLISK-IRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNV 478
G + +++ I+ + + ++ IID + + D+A++ + + G NV
Sbjct: 567 VGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR-EMSENGKSPNV 625
Query: 479 NXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKL 538
K R AL+M EM + D+ + L+ F D+KT L
Sbjct: 626 ---VTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 539 FTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
F+ + ++GL P+ +Y LI G+ N + A L++ M N G D T ++ L K
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK 742
Query: 599 EG 600
+G
Sbjct: 743 DG 744
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ A L M GI P++ ++ +M + ++ R +F+ + + GLEP+ +
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y ILI+G+ +K AW + M S F + ++ L K G+ +A
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 494 CGRNS--DALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
C +N A + E+ G+ P++ ++ L+ F NLG + L+ + G+ D
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
+ Y +I+G LA L+ ++ + G +PD M+LV L K+G+ +A+ + E
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLE 789
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 170 ACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEV 229
+CT SYN ++ V++G+ AV ++ M + G PN + T ++ KS ++ A+E+
Sbjct: 589 SCT-SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 230 FNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVSLSL 283
+ M M +K Y LI+GF L +E+ G+MP+ V SL
Sbjct: 648 THEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ A+D+ +M+ +GI D+ T++ ++ G+I L++ + +G+ PD L+
Sbjct: 709 GKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILH 768
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+L+ G + A K+ E+MK P+ ++ +EG EA
Sbjct: 769 MVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 115/561 (20%), Positives = 212/561 (37%), Gaps = 94/561 (16%)
Query: 96 PYFSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDS 155
P F HT +L A+ +L +SGR ++ +S L+ +++ +R
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQS---------------CLLRMIRRSGVSR---- 147
Query: 156 ALRVWDQYRLDNTHACTESYNVVMALCVEMGNDA----EAVRVFQRMIDEGSLPNCRSCT 211
L + + LD+T + S + V L + A EA F + +G + +C
Sbjct: 148 -LEIVNS--LDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACN 204
Query: 212 IIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVD 271
++ LV+ + A V+ I R+G ++ + I+VN + D
Sbjct: 205 ALIGSLVRIGWVELAWGVYQ-----EISRSGVGINVYT-----------LNIMVNALCKD 248
Query: 272 GIMPSREVSLSLQQMQEEGLLKGVDEFLRELLRDEGNQGIKNVRYSIXXXXXXXXXXXXX 331
G M +V L Q+QE+G+ + + L+ ++G+ + +
Sbjct: 249 GKM--EKVGTFLSQVQEKGVYPDIVTY-NTLISAYSSKGLMEEAFELM------------ 293
Query: 332 XXNNVDGIHLKPWLDPQALASALKNWSPDEVSALEGANFVWTTRLVCKILRKLKSPETAW 391
N + G K +SP V+T V L K E A
Sbjct: 294 --NAMPG----------------KGFSPG----------VYTYNTVINGLCKHGKYERAK 325
Query: 392 NFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDF 451
F + + G + + T + ++ + G +K+ S +R+ + ++
Sbjct: 326 EVFAEML-RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 452 YGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNG 511
+ S N D AL FN+ + NV + G S A+++ +EM+ G
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNV----IYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 512 ICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAW 571
D+ T++ ++H + KLF + + L PD+Y ILI+G+C A
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 572 KLFEDMKNSGFLPDSATKMLLVKSLWKEG---KRKEAAAVEESCEEIKSPLPLALPGHSW 628
+LF+ MK D T L+ K G KE A S E + +P+ ++ ++
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 629 TVSSADLTRVYNIYSNSFASN 649
S L + ++ + N
Sbjct: 561 -CSKGHLAEAFRVWDEMISKN 580
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVR---------KLFTMVRQIGLEPD 550
A ++ EM+ +G+ PDI T++ L+ G ++ LF + G++P+
Sbjct: 35 AQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPN 94
Query: 551 AYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y +I G+C A+ LF MK G LPDS T L+++ ++G + AA E
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDK---AASAE 151
Query: 611 SCEEIKS 617
+E++S
Sbjct: 152 LIKEMRS 158
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 20/252 (7%)
Query: 380 ILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMR 439
+L L+ + FF WV ++ F M L +L++++ ++ +G+
Sbjct: 159 VLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVE 218
Query: 440 LPFSTIRLIIDFYGLSKNADAALKVFNN--------DRILCGPISNVNXXXXXXXXXXXX 491
L T II + A++ F D + I +V
Sbjct: 219 LDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV------------Y 266
Query: 492 XKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
K G+ + L + + + G PD FS L F GD +R + ++ + ++P+
Sbjct: 267 SKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNV 326
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEES 611
+Y L+E + + LA LF +M +G P+ T LVK K ++A + E
Sbjct: 327 VVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEE 386
Query: 612 CEEIKSPLPLAL 623
+ K P+ L
Sbjct: 387 MKAKKWPMDFIL 398
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 498 SDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKIL 557
S A D+LD M G+ P+ + L+ + + +++ R+ F ++ + PD + Y I+
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
I YC A+ LFEDMK PD T +L+ S
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G +A + D+MI +G+ PD ++ L+ +G +K + +F + + G++PD
Sbjct: 773 KIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSAT 588
Y LI G C + A KL ++M G P A+
Sbjct: 833 PYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A+++ EM GI PD+ ++ L+ G L + G PD
Sbjct: 408 KLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
+Y +L G + A A++ + M+N G P T ++++ L G+ +A A ES
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 613 E 613
E
Sbjct: 528 E 528
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 5/225 (2%)
Query: 381 LRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRL 440
L++++ PE A + F + GF H+ + ++ LA+ + + VD+++ +R +R
Sbjct: 56 LKEIEDPEEALSLF-HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRC 114
Query: 441 PFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDA 500
S +I YG + + D A+ VF+ + + + +
Sbjct: 115 RESLFMGLIQHYGKAGSVDKAIDVFHKITSF-DCVRTIQSLNTLINVLVDNGELEKAKSF 173
Query: 501 LDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEG 560
D +M L P+ +F+ L+ F + D + K+F + ++ ++P Y LI
Sbjct: 174 FDGAKDMRLR---PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF 230
Query: 561 YCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
C + A L EDM P++ T LL+K L +G+ EA
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEA 275
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLF-TMVRQIGLEPDA 551
K G A +ML+EM+ NG P++ T + L+ G + +LF +VR +P+
Sbjct: 299 KKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNV 358
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
+ Y +I GYC + A LF MK G P+ T L+ K G
Sbjct: 359 HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG 407
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 170/459 (37%), Gaps = 55/459 (11%)
Query: 184 EMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMPLMRIKRTGK 243
E+G EAV + M ++G P+ + ++E V+ + A VF+ M + +
Sbjct: 159 EIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSS 218
Query: 244 QYSILIEGFAGSKRFGEVGILVNEMQVDGIMP-SREVSLSLQQMQEEGLLKGVDEFLREL 302
Y +++ G + E + M G +P + +L L + E GL+ + R++
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM 278
Query: 303 LRDEGNQGIKNVRYSIXXXXXXXXXXXXXXXNNVDGIHLKPWLDP--QALASALKN-WSP 359
+ + G K + +DG+ K + + L ++N W P
Sbjct: 279 I----DLGFKPNLINFTSL--------------IDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 360 D---EVSALEG-ANFVWTTRLVCKILRKLKSPETAWNFFCWVT----------------- 398
+ + ++G WT + L+ ++S N + +
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 399 ----NQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGL 454
+ G N+NT ++ + G +L++ + EG T ID
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 455 SKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRN--SDALDMLDEMILNGI 512
A A ++ N CG ++ +C +N + AL M G
Sbjct: 441 KSRAPEAYELLNK-AFSCGLEAD-----GVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 513 CPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWK 572
D++ + L+ F +K +LF +V +GL P Y +I YC LA K
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 573 LFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEES 611
F +MK G +PDS T L+ L K+ EA + E+
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 593
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 511 GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALA 570
G+ P +T++ ++ + GDI K F +++ G PD++ Y LI G C A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Query: 571 WKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
KL+E M + G P T++ L ++ KR ++A
Sbjct: 588 CKLYEAMIDRGLSPPEVTRVTLA---YEYCKRNDSA 620
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 493 KCGRNSDALDMLDEMILN-GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
KC + +DEM + + PD+ +F+ L+ N +++ L + + G +PD
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+LY +++G+C + + A +++ MK G PD T L+ L K G+ +EA
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQ-IGLEPDAYL 553
GR +A D++ E+ PD T++ L+ + D+ V + +R ++PD
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
+ ILI+ CNSK A L + N+GF PD ++K K EA V + +
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 614 E 614
E
Sbjct: 293 E 293
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G + A + DEM L GI P+I T++ L+ LG++ ++L + Q G+ P+A Y
Sbjct: 769 GDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITY 828
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDS 586
LI+G S A A +L E M G + S
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGS 860
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ G+ DA+ + D MI G+ + + L++ + G + ++F+ + L+PD +
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVK------------SLWKEG 600
Y L++GYC + A KL + M +P T +L+K SLWK
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 601 KRKEAAAVEESCEEIKSPL 619
++ A E SC + L
Sbjct: 463 LKRGVNADEISCSTLLEAL 481
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 112 LAKSGRRAELKSLLDDI-EAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQYRLDNTHA 170
L K+G+ + + L D+ + RF +++ L+ A A D++ A + D+ L
Sbjct: 729 LCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIP 788
Query: 171 CTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVF 230
+YN ++ ++GN A R+ ++ +G PN + +++ LVKS +AEAM +
Sbjct: 789 NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLK 848
Query: 231 NMM 233
M
Sbjct: 849 EKM 851
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR +A ++L EM GI PD+ ++ L+ + G + L + G+ PD
Sbjct: 400 KLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLI 459
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA----AAV 608
Y +L+ G + +++E MK G P++ T ++++ L K KEA +++
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Query: 609 EESCEEIKSPL 619
E+ C E K+
Sbjct: 520 EQKCPENKASF 530
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 26/222 (11%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G + ++ T +++ LAR+GH E V ++ +++AEG + T +II+ ++ A
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXK-----------------------C--GR 496
F++ C P + + C G
Sbjct: 513 EDFFSSLEQKC-PENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGY 571
Query: 497 NSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKI 556
A D+L +M + P ++ F L +++ + LF + + GL PD + Y I
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI 631
Query: 557 LIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
+I YC A LFEDMK G PD T +L+ K
Sbjct: 632 MIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 673
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 495 GRNSDALDMLDEMILN-GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
G DALD+ ++MI G+ P++ ++ L+ F + G+I +F+ + +IG P+
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 554 YKILIEGYCNSKRAAL--AWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
Y LI G+ +KR +L A ++ M SG P+ +V++L + K KEA ++ E
Sbjct: 390 YGSLINGF--AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 92/241 (38%), Gaps = 39/241 (16%)
Query: 377 VCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAE 436
V K LR+ A +FF + N F H T + ++ LA G + V L+ +++ +
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 437 GMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGR 496
G +I Y + G
Sbjct: 106 GFHCSEDLFISVISVY---------------------------------------RQVGL 126
Query: 497 NSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKI 556
A++M + G P ++ ++ ++ I+ + ++ +++ G EP+ + Y +
Sbjct: 127 AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186
Query: 557 LIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIK 616
L++ C + + A KL +M N G PD+ + ++ S+ + G KE + E E +
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVV 246
Query: 617 S 617
S
Sbjct: 247 S 247
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 493 KCGRNSDALDMLDEMILN-GICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
KC + +DEM + + PD+ +F+ L+ N +++ L + + G +PD
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+LY +++G+C + + A +++ MK G PD T L+ L K G+ +EA
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR +A L M+ G PD T++ LM+ G+ L + G P+
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDC 371
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y L+ G C ++ +L+E MK+SG +S LV+SL K GK EA V +
Sbjct: 372 TYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYA 431
Query: 613 EEIKS 617
+ KS
Sbjct: 432 VDSKS 436
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQ-IGLEPDAYL 553
GR +A D++ E+ PD T++ L+ + D+ V + +R ++PD
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
+ ILI+ CNSK A L + N+GF PD ++K K EA V + +
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 614 E 614
E
Sbjct: 293 E 293
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A+ ++ L P+I +S + + GD+ +F + ++GL PD
Sbjct: 353 KVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y +I+GYCN R A++ F + SG P T +L+ + + G +A +V
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
PD+ T S L+H + ++ LF + GL+PD LY LI GYC+ A +L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 574 FEDMKNSGFLPDSATKMLLVKSLWKEGKR 602
M G LP+ +T LV L EGKR
Sbjct: 641 IGLMVQRGMLPNESTHHALVLGL--EGKR 667
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 82/200 (41%), Gaps = 14/200 (7%)
Query: 418 ARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRI--LCGPI 475
+R G + + ++ EG++L T ++ YG + + ++ + R + +
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 476 SNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTV 535
+ N G +A +++ E+I G P F+ ++ F+ GD +
Sbjct: 514 ATYNILIHSMVVR------GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 536 RKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
L+ + + ++PD L+ GYC ++R A LF + ++G PD L+
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 596 LWKEGKRKEAAAVEESCEEI 615
G +E++CE I
Sbjct: 628 YCSVGD------IEKACELI 641
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR A ++ +G P + T + L+ + G I +F ++ GL+ D Y
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
L+ GY + + ++L ++M+++G PD AT +L+ S+ G EA +
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G+ +A+ ++ L P+I +S + + GD+ +F + ++GL PD
Sbjct: 353 KVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y +I+GYCN R A++ F + SG P T +L+ + + G +A +V
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
PD+ T S L+H + ++ LF + GL+PD LY LI GYC+ A +L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 574 FEDMKNSGFLPDSATKMLLVKSLWKEGKR 602
M G LP+ +T LV L EGKR
Sbjct: 641 IGLMVQRGMLPNESTHHALVLGL--EGKR 667
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 82/200 (41%), Gaps = 14/200 (7%)
Query: 418 ARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRI--LCGPI 475
+R G + + ++ EG++L T ++ YG + + ++ + R + +
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 476 SNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTV 535
+ N G +A +++ E+I G P F+ ++ F+ GD +
Sbjct: 514 ATYNILIHSMVVR------GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 536 RKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
L+ + + ++PD L+ GYC ++R A LF + ++G PD L+
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 596 LWKEGKRKEAAAVEESCEEI 615
G +E++CE I
Sbjct: 628 YCSVGD------IEKACELI 641
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR A ++ +G P + T + L+ + G I +F ++ GL+ D Y
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
L+ GY + + ++L ++M+++G PD AT +L+ S+ G EA +
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR DA ++L M PD+ +++ LMH + +G LF +R + P Y
Sbjct: 357 GRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
LI+G C S A +L E+M PD T LVK K G A V
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR A EM G+ P++ T + L++ G+I + + + G+ P+ Y
Sbjct: 597 KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVE 609
Y +LI C+ ++ KL+++M + PD T L K L K+ + +E +E
Sbjct: 657 SYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLE 713
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 443 STIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRN---SD 499
ST +ID YG + + A +F+ PI V CG + S+
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT-------CGTHGHLSE 358
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A +L +M GI PD +T++ L+ A+ GDI+ + + +R++GL PD ++ ++
Sbjct: 359 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
C K A + +M + D + ++++ EG +A A+ E
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE 469
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR +DA ++ EM+ +G+ D TF+ ++H G + L + + G+ PD
Sbjct: 317 KAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTK 376
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y IL+ + ++ A + + ++ G PD+ T ++ L +RK A VE
Sbjct: 377 TYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC---QRKMVAEVEAVI 433
Query: 613 EEI 615
E+
Sbjct: 434 AEM 436
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%), Gaps = 4/192 (2%)
Query: 419 RHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNV 478
+HG + +++ + G +T ++I+ YG + D ++ + G + NV
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ-GILPNV 549
Query: 479 NXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKL 538
K GR +DA++ L+EM G+ P ++ L++ +A G +
Sbjct: 550 ---VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606
Query: 539 FTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
F ++ GL+P LI + +R A A+ + + MK +G PD T L+K+L +
Sbjct: 607 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Query: 599 EGKRKEAAAVEE 610
K ++ V E
Sbjct: 667 VDKFQKVPVVYE 678
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 99/258 (38%), Gaps = 16/258 (6%)
Query: 362 VSALEGANFVWTTRLVCKIL-RKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARH 420
VS L+ N ++ L+ IL L E + F Q T T ++ AR+
Sbjct: 154 VSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQKQ---TLTPLTYNALIGACARN 210
Query: 421 GHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAAL-----KVFNNDRILCGPI 475
E LI+K+R +G + F L+I S D+ + K D++ +
Sbjct: 211 NDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELD-V 269
Query: 476 SNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTV 535
VN K G S AL +L G+ T ++ A+ G
Sbjct: 270 QLVNDIIMGFA------KSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 323
Query: 536 RKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
LF +RQ G++P Y L++GY + A + +M+ G PD T LL+ +
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
Query: 596 LWKEGKRKEAAAVEESCE 613
G+ + A V + E
Sbjct: 384 YVNAGRWESARIVLKEME 401
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A+ D M+ GI PD T++ L+ G ++F + + G P A Y I+I
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKS 617
Y + +R +L MK+ G LP+ T LV K G+ +A E EE+KS
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI---ECLEEMKS 577
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ DA EM+ GI ++ T++ L+ + G + L + + GL+PD + Y
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
LI GY + L+E+MK SG P T LL+ KEG
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 61/116 (52%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G + + + M + I P + TF+ L+ G ++ + ++ +G PDA+
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+ IL +GY ++++A A ++E +SG ++ T +L+ +L KEGK ++A +
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G A ++ +MI I D T++ L+ +G + VR L + +EP+A Y
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
I+++G+C K A+ + +M+ GFL D LV L +E + KEA V
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIV 792
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G S AL +L+ M+ G+ P++ T + L+H + G + + +R + PD Y
Sbjct: 419 GDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTY 478
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
+L+ C LA++L+++M G PD T LV+ L +G+ K+A ++
Sbjct: 479 NLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 28/218 (12%)
Query: 401 PGF-THNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNAD 459
PG THN ++ L + G+ E D L+ ++R G + +I N D
Sbjct: 154 PGLITHN-----HLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVD 208
Query: 460 AALKVFNN--------DRILCGPISNVNXXXXXXXXXXXXXKCGRNSDAL--DMLDEMIL 509
AL +FN +R+ C I + G N+ L ++LD
Sbjct: 209 KALYLFNTMNKYGIRPNRVTCNIIVHA---------LCQKGVIGNNNKKLLEEILDSSQA 259
Query: 510 NGICP-DIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAA 568
N P DI + LM G++ +++ + Q + D+ +Y ++I G C+S
Sbjct: 260 NA--PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMV 317
Query: 569 LAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAA 606
A+ DM G PD T L+ +L KEGK EA
Sbjct: 318 AAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEAC 355
>AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:338538-339905 FORWARD
LENGTH=409
Length = 409
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 27/273 (9%)
Query: 348 QALASALKNWSPDEVS--ALEGANFVWTTRL---------VCKILRKLKSPETAWNFFCW 396
QAL + +SP++ S L GA W R+ + K L+ L SP F+
Sbjct: 99 QALMRQIICFSPEKGSFCDLLGA---WLRRMNPIRADWLSILKELKNLDSP-----FYIK 150
Query: 397 VTN----QPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFY 452
V Q F N +++ + E ++ + ++ G + T+ ++ Y
Sbjct: 151 VAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLY 210
Query: 453 GLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGI 512
+ A + FN ++L P+ + G +L EM I
Sbjct: 211 SKAGCHKLAEETFNEIKLLGEPLD----YRSYGSMIMAYIRAGVPEKGESLLREMDSQEI 266
Query: 513 CPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWK 572
C + + L+ ++ GD + +++F V+ G+ PD L +LI Y S ++ A
Sbjct: 267 CAGREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARL 326
Query: 573 LFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
FE+M+ +G L++ + KE K EA
Sbjct: 327 AFENMRKAGIKATDKCVALVLAAYEKEEKLNEA 359
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 500 ALDMLDEMILNGIC-PDIQTFSGLMHYFANLGDIKTVRKLFT-MVRQIGLEPDAYLYKIL 557
A+++L EM + +C PD+ T+ L+ GD+ V KL MV + L D Y L
Sbjct: 384 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 443
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKS 617
I+ C + A+ LFE+M + P T +LL++ + K+ + A +E + +K
Sbjct: 444 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKL 503
Query: 618 PLPL 621
P+
Sbjct: 504 TAPV 507
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 500 ALDMLDEMILNGIC-PDIQTFSGLMHYFANLGDIKTVRKLFT-MVRQIGLEPDAYLYKIL 557
A+++L EM + +C PD+ T+ L+ GD+ V KL MV + L D Y L
Sbjct: 384 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 443
Query: 558 IEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKS 617
I+ C + A+ LFE+M + P T +LL++ + K+ + A +E + +K
Sbjct: 444 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKL 503
Query: 618 PLPL 621
P+
Sbjct: 504 TAPV 507
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+C R S AL L +M+ G P I TF L++ F ++ L + +G EP+
Sbjct: 126 RCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVV 185
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
+Y +I+ C + A + + MK G PD T L+ L+ G
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG 233
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K R D + +L M +G+ D T++ L + G K+ + G+ PD Y
Sbjct: 336 KAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY 395
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
+ IL++G C+ + A ED++ S + T +++K L K K ++A
Sbjct: 396 TFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ G A+D+ ++MI G P++ T++ L+ F +LG + + + V+ GL PD
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
L ++I Y R A K+F ++ +PD T ++ SL GK
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGK 367
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ G S+A ++ MI +GI + +S L+ F G+ + LF + QIG P+
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y LI+G+ + A+ + +++ G PD L++ + + G+ +EA V S
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 613 EEIK 616
E+ K
Sbjct: 344 EKRK 347
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%)
Query: 512 ICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAW 571
I P + +F+ +M + LG + + F V + GL P Y + ILI G C A A
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 572 KLFEDMKNSGFLPDSATKMLLVKSL 596
+L DM G PDS T +L K
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGF 302
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G +AL++ +I GI P + TF+ L++ + +I RK+ +++ GL P
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y L++ Y N +L +MK G P + T ++ K L + K + V
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%)
Query: 512 ICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAW 571
I P + +F+ +M + LG + + F V + GL P Y + ILI G C A A
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 572 KLFEDMKNSGFLPDSATKMLLVKSL 596
+L DM G PDS T +L K
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGF 302
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G +AL++ +I GI P + TF+ L++ + +I RK+ +++ GL P
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y L++ Y N +L +MK G P + T ++ K L + K + V
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 509 LNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAA 568
LN I P SGL G I LF ++ GL PD Y I+I G C +
Sbjct: 360 LNSIIPCSVMLSGL----CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 569 LAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEES 611
+A L+++M + LP+S T L+ L ++G EA ++ +S
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 62/114 (54%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR+ +A + + +M + G P+I +S L++ ++ GD K +L T ++ IGL P+ +
Sbjct: 251 GRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMM 310
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
L++ Y + +L +++++G+ + +L+ L K GK +EA ++
Sbjct: 311 TTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSI 364
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +A + L+ M GI P++ T++ LM GDI++ LF EPD +Y
Sbjct: 808 GRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF---EGTNCEPDQVMY 864
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLP--DSATKML 591
L++G C+ KR A L +M+ SG P DS K+L
Sbjct: 865 STLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 172 TESYNVVM-ALCVEMGNDAEAV-RVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEV 229
T +YNV++ CVE ND+E+ RV M+++G P+ S +I+ + +K EA +
Sbjct: 293 TVTYNVLINGFCVE--NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYL 350
Query: 230 FNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSRE-VSLSLQQMQE 288
F MP Y I+ +G +F E ++++EM G P R+ + LQ++ E
Sbjct: 351 FEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE 410
Query: 289 EGLLKGVDEFLRELLR 304
G L+ + + + L R
Sbjct: 411 SGKLEILSKVISSLHR 426
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKL-FTMVRQIGLEPDAYL 553
G DAL + DEM+ + P TF L+H +K K+ M++ G+ P ++
Sbjct: 166 GCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHI 225
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCE 613
Y LI+ C + A+KL ++ D+A L+ SL K G+ E + + E
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 614 E 614
E
Sbjct: 286 E 286
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR+++ +L+EM G PD T++ L++ F D ++ ++ + + GL+PD
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y +++ + K+ A LFEDM G PD+ + ++ L EG + E AAV
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC-EGLQFEEAAV 384
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R DA MLD M G PD+ TFS L++ + + ++F + + G+ + Y
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
LI G+C A L +M + G PD T ++ L + + ++A A+ E
Sbjct: 190 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR SDA +L MI I PDI TFS L++ F + +++ + + + P Y
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
+I+G+C R A ++ + M + G PD T L+ K
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R DA MLD M G PD+ TFS L++ + + ++F + + G+ + Y
Sbjct: 25 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 84
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
LI G+C A L +M + G PD T ++ L + + ++A A+ E
Sbjct: 85 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 139
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 12/243 (4%)
Query: 369 NFVWTTRLVCKILRKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDK 428
N +TT + C R+ P+ A +F +++ N+ T+ ++ R G+ ++
Sbjct: 210 NATFTTIISCA--RQNGVPKRAVEWFEKMSSFGCEPDNV-TMAAMIDAYGRAGNVDMALS 266
Query: 429 LISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXX 488
L + R E R+ T +I YG+S N D L ++ + L G N+
Sbjct: 267 LYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKAL-GVKPNL---VIYNRLI 322
Query: 489 XXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYF--ANLGDIKTVRKLFTMVRQIG 546
+ R A + ++I NG P+ T++ L+ + A GD ++ +++ G
Sbjct: 323 DSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGD--DALAIYREMKEKG 380
Query: 547 LEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFL-PDSATKMLLVKSLWKEGKRKEA 605
L LY L+ +++ A+++F+DMKN PDS T L+ G+ EA
Sbjct: 381 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Query: 606 AAV 608
A
Sbjct: 441 EAA 443
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 5/178 (2%)
Query: 424 ELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAALKVFNNDRILCGPISNVNXXXX 483
ELV+ + ++R G T+ ++ Y + ++ AL VFN IL + +
Sbjct: 196 ELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFN--EILSRGWLDEHISTI 253
Query: 484 XXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVR 543
+ + + ++ML+E I + +T+ L+H F I +LF +R
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEE---RDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMR 310
Query: 544 QIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
++G+ D LY +LI G C K +A L+ ++K SG PD L+ S +E +
Sbjct: 311 RMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 493 KCGRNSDALDMLDEMI-LNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
K GR+ +A +L E I L G+ P I T++ L+ G +LF ++ ++P+
Sbjct: 130 KLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPEL 188
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKE 604
Y ILI G C S+R + ++K SG+ P++ T ++K +K KR E
Sbjct: 189 MTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKT-KRIE 240
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 174 SYNVVMALCVEMGNDAEAVRVFQRMID-EGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNM 232
SYN +M+ ++G EA ++ I G +P + I+++ L KS A+E+F
Sbjct: 120 SYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH 179
Query: 233 MPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPSREVSLSLQQM--QEEG 290
+ R+K Y+ILI G S+R G V ++ E++ G P+ ++ +M + +
Sbjct: 180 LK-SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKR 238
Query: 291 LLKGVDEFLRELLRDEG 307
+ KG+ FL+ ++ EG
Sbjct: 239 IEKGLQLFLK--MKKEG 253
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 497 NSDALD-MLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
N DA+D +L+E+ + G+ PD T + +++ N+G+ K + ++G++P
Sbjct: 309 NLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCN 368
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEI 615
LI+G C + A +LF M+ + D T +V +L K+G+ A+ + SC
Sbjct: 369 CLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNK 424
Query: 616 KSPLP 620
+P
Sbjct: 425 GMKIP 429
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR +DA +L +MI I PD+ TFS L++ G + +++ + + G+ P Y
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
+I+G+C R A ++ + M + PD T L+ K
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G AL++L +M I + ++ ++ G + LFT + G+ PD
Sbjct: 53 KMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVI 112
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y +I+ +C S R A +L DM PD T L+ +L KEGK EA +
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +DA MLD M PD+ TFS L++ + + ++F + + G+ + Y
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
LI G+C A L M +SG P+ T ++ SL + + ++A A+ E
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G+ S+A ++ +M+ GI P T++ ++ F + +++ + PD +
Sbjct: 160 GKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
LI GYC +KR ++F +M G + ++ T L+ + G
Sbjct: 220 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +AL + +EM+ G+ P + ++ L+ FA G ++ + +F +R+ + PD + Y
Sbjct: 329 REEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYT 388
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
++ Y N+ A K F+ +K GF P+ T L+K K
Sbjct: 389 TMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%)
Query: 496 RNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYK 555
R +AL + +EM+ G+ P + ++ L+ FA G ++ + +F +R+ + PD + Y
Sbjct: 336 REEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYT 395
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWK 598
++ Y N+ A K F+ +K GF P+ T L+K K
Sbjct: 396 TMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR ++ L EM G+ PD+ ++ L+ I+ +KL+ + G + +
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT 468
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESC 612
Y +LI A + +LF+ M G PD M L++ L KE K + A V C
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKC 528
Query: 613 EE 614
E
Sbjct: 529 ME 530
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 97 YFSHTQNTLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSA 156
YFS Q + + + L K+GR E + L +++ + L++ A + A
Sbjct: 393 YFSELQ-SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA 451
Query: 157 LRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEH 216
++WD+ ++ +YNV++ E G E++R+F +M++ G P+ ++E
Sbjct: 452 KKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
Query: 217 LVKSQKLAEAMEVF 230
L K K+ AMEVF
Sbjct: 512 LCKETKIEAAMEVF 525
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 495 GRNSDALDMLDEMILNGIC---PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDA 551
G +A D+ D MI G P +TF+ ++ A + +L + G PD
Sbjct: 317 GMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDV 376
Query: 552 YLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
YK +IEG C +++ A+K ++M N G+ PD T ++ L + K EA
Sbjct: 377 STYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEA 430
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 9/213 (4%)
Query: 399 NQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNA 458
+ G T ++ + M ++ + G KL ++++ M+L +I G S+
Sbjct: 216 DTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGV 275
Query: 459 DAALKVFNNDRIL-CGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQ 517
+ ++VF R C P NV GR DA MLDEM G PD
Sbjct: 276 EFGIRVFREMRERGCEP--NVATHNTIIKLLCED---GRMRDAYRMLDEMPKRGCQPDSI 330
Query: 518 TFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDM 577
T+ M F+ L + LF + + G+ P Y +L+ + +++ M
Sbjct: 331 TY---MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTM 387
Query: 578 KNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEE 610
K SG PDSA ++ +L ++G A EE
Sbjct: 388 KESGDTPDSAAYNAVIDALIQKGMLDMAREYEE 420
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
P++ ++ +++ + GD+ + + + + +PD + ILI GYC S + LA L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 574 FEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
F +MK G P+ + L++ GK +E +
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKM 285
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 495 GRNSDALDMLDEMILNGIC-PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYL 553
G +A D+ +MI +C PD T++ ++ F +++T K++ +R+ G+ P +
Sbjct: 391 GEKDEAFDVFRKMI--KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 554 YKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGK 601
+ +LI G C + A L E+M G P T L + L KE +
Sbjct: 449 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 59/116 (50%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K GR +AL ++ M + P +S L+H + ++ F + + G++ D
Sbjct: 284 KAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVA 343
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
++ LI +C + R +++ ++MK+ G P+S + ++++ L + G++ EA V
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 1/173 (0%)
Query: 104 TLHALATVLAKSGRRAELKSLLDDIEAKRFGNVKFSLMTLLQWHAAARDVDSALRVWDQY 163
T + +L K+GR E ++ ++ F L+ + ++ A+ + +
Sbjct: 274 TYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEM 333
Query: 164 RLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKL 223
A +N ++ + RV + M +G PN +SC II+ HL++ +
Sbjct: 334 ERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEK 393
Query: 224 AEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPS 276
EA +VF M + + Y+++I+ F K + M+ G+ PS
Sbjct: 394 DEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 175 YNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIMEHLVKSQKLAEAMEVFNMMP 234
+N V+ C + A+++F+ M+D G P S ++ L K + EA V+N M
Sbjct: 461 WNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI 520
Query: 235 LMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIMPS 276
+ I+ Y+ + G ++F + L+ EM GI PS
Sbjct: 521 KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPS 562
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 514 PDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKL 573
PD+ ++ +++ K V +F +R+ GL P+ Y + +E S +
Sbjct: 339 PDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDF 398
Query: 574 FEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
F MK+SG P + T +LV++LW+EGK +EA
Sbjct: 399 FRKMKSSGEAPKAITYKVLVRALWREGKIEEA 430
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 7/255 (2%)
Query: 363 SALEGANFVWTTRLVCKILRKLKS-PETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHG 421
SAL+ + LV + +L S P + F W +PGFT + + V+ L +
Sbjct: 90 SALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAR 149
Query: 422 HSELVDKLI-SKIRA-EGMRL-PFSTIRLIIDFYGLSKNADAALKVFNNDR---ILCGPI 475
E+ L+ ++R+ EG L T ++I Y + A++ F R +C
Sbjct: 150 EFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSA 209
Query: 476 SNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTV 535
+ + S L+ + + + P ++ F+ L++ + +K
Sbjct: 210 TELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQA 269
Query: 536 RKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS 595
KL+ ++ + ++P Y LIEGYC +R +A ++ E+MK + + ++
Sbjct: 270 EKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDG 329
Query: 596 LWKEGKRKEAAAVEE 610
L + G+ EA + E
Sbjct: 330 LGEAGRLSEALGMME 344
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 12/226 (5%)
Query: 382 RKLKSPETAWNFFCWVTNQPGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLP 441
RKLK E W + +P + T ++ R ++ +++ +++ M +
Sbjct: 264 RKLKQAEKLWEEMKAMNVKP----TVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEIN 319
Query: 442 FSTIRLIIDFYGLSKNADAALKVFNNDRILC--GPISNVNXXXXXXXXXXXXXKCGRNSD 499
F IID G + AL + +C GP K G
Sbjct: 320 FMVFNPIIDGLGEAGRLSEALGMMER-FFVCESGP-----TIVTYNSLVKNFCKAGDLPG 373
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
A +L M+ G+ P T++ YF+ + L+ + + G PD Y ++++
Sbjct: 374 ASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILK 433
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
C + +LA ++ ++MKN G PD T +L+ L + +EA
Sbjct: 434 MLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
+ GR S+AL M++ + P I T++ L+ F GD+ K+ M+ G++P
Sbjct: 332 EAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTT 391
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y + + + L+ + +G PD T L++K L ++GK A V
Sbjct: 392 TYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQV 447
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 497 NSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLF-TMVRQIGLEPDAYLYK 555
++ AL +EM GI P +++ LM FA G K ++F M+ ++ D +
Sbjct: 539 SAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWN 598
Query: 556 ILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKS------------LWKEGKRK 603
+L+EGYC A ++ MK +GF P+ AT L LWKE K +
Sbjct: 599 MLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Query: 604 EAAAVEESCEEIKS-PLPLAL 623
A +E+ + S P P L
Sbjct: 659 CAVKKKEAPSDSSSDPAPPML 679
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K G AL +L++M L+G PD+ T++ ++ + G+ + + + Q G P
Sbjct: 186 KKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMI 245
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
Y +L+E C +A A ++ EDM G PD T LV + G +E A+V
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASV 301
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 86/216 (39%), Gaps = 7/216 (3%)
Query: 396 WVTNQ---PGFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFY 452
WV Q GF+ ++ T ++ R G + D+L ++ +G T +++
Sbjct: 240 WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 299
Query: 453 GLSKNADAALKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGI 512
G AAL N+ + + + G LDEM+ G
Sbjct: 300 GKGNKPLAALTTLNHMK----EVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGC 355
Query: 513 CPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWK 572
PD+ ++ ++ + G++ +++F + G P+ + Y +I G C + A
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACW 415
Query: 573 LFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAV 608
L ++M++ G P+ LV L K GK EA V
Sbjct: 416 LLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKV 451
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%)
Query: 500 ALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIE 559
AL +LDE P++ TFS L+ F N G + KL + + +EPD + ILI
Sbjct: 221 ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILIS 280
Query: 560 GYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
G R L E MK G P+ T ++ L + + EA
Sbjct: 281 GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
GR + + +L++M + + PD+ ++ ++ D KLF + +GL PD Y Y
Sbjct: 265 GRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTY 324
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEG 600
+ I G C A K+ M G P+ T +L+K+L K G
Sbjct: 325 NVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 6/218 (2%)
Query: 402 GFTHNINTVQRVMTLLARHGHSELVDKLISKIRAEGMRLPFSTIRLIIDFYGLSKNADAA 461
G ++ + V+ +L +G E +++++ + +T R+ +D K ADA
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 662
Query: 462 LKVFNNDRILCGPISNVNXXXXXXXXXXXXXKCGRNSDALDMLDEMILNGICPDIQTFSG 521
K ++ +L I K G A ++ +M G PD TF+
Sbjct: 663 FK--THETLLSYGIKL--SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 718
Query: 522 LMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLYKILIEGYCNSKRAALAWKLFEDMKNSG 581
LMH + ++ ++++ + G+ P+ Y +I G ++ K +MK+ G
Sbjct: 719 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 778
Query: 582 FLPDSATKMLLVKSLWKEGKRKEAAAVEESCEEIKSPL 619
PD T L+ K G K + + CE I L
Sbjct: 779 MRPDDFTYNALISGQAKIGNMKGSMTI--YCEMIADGL 814
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G +A L EM+ GI PD +++ L+ F +G+ + L + ++ L +
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL----ITH 230
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAAVEESCEE 614
IL+ Y N A++ DM SGF PD T ++ L K GK E + EE
Sbjct: 231 TILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEE 287
Query: 615 IKSPLPLALPGHSWTVSSADLTRVYNIYSNSFA 647
+ P H + D NIY ++ A
Sbjct: 288 MS-----VYPNHVTYTTLVDSLFKANIYRHALA 315
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%)
Query: 495 GRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAYLY 554
G +AL + EM GI + ++ LM + I+ V LFT +R GL+P A Y
Sbjct: 358 GLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATY 417
Query: 555 KILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEAAA 607
IL++ Y + + L +M++ G P+ + L+ + + K + AA
Sbjct: 418 NILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAA 470
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 155 SALRVWDQYRLDNTHACTESYNVVMALCVEMGNDAEAVRVFQRMIDEGSLPNCRSCTIIM 214
A +++ + N +Y ++M C + G E ++ M++ PN +
Sbjct: 403 EAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQ 462
Query: 215 EHLVKSQKLAEAMEVFNMMPLMRIKRTGKQYSILIEGFAGSKRFGEVGILVNEMQVDGIM 274
+ L+K+ KL +A F+MM + ++K + Y ++ + + R E+ +V+EM D +
Sbjct: 463 DQLIKAGKLDDAKSFFDMM-VSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTV 521
Query: 275 PSREVSLSLQQMQEEGLLKGVDEFLRELLRDE 306
VS LQ+ +E L KG E E L +E
Sbjct: 522 ---RVSEELQEFVKEELRKGGREGDLEKLMEE 550
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 493 KCGRNSDALDMLDEMILNGICPDIQTFSGLMHYFANLGDIKTVRKLFTMVRQIGLEPDAY 552
K + +A + DEM+ G+ P I+T+ M L + V +L +R++G EP
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI---LRTGEEVFELLAKMRKMGCEPTVE 441
Query: 553 LYKILIEGYCNSKRAALAWKLFEDMKNSGFLPDSATKMLLVKSLWKEGKRKEA 605
Y +LI C + L+++MK PD ++ ++++ L+ GK +EA
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEA 494