Miyakogusa Predicted Gene
- Lj2g3v1828360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1828360.1 tr|G7KAT3|G7KAT3_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,74.11,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
seg,NUL,CUFF.37870.1
(1957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59724 weakly similar to UniRef100_A9U8E1 Cluster: Pre... 1439 0.0
gnl|LJGI|TC80844 weakly similar to UniRef100_A7PV23 Cluster: Chr... 1193 0.0
>gnl|LJGI|TC59724 weakly similar to UniRef100_A9U8E1 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(10%)
Length = 842
Score = 1439 bits (726), Expect = 0.0
Identities = 726/726 (100%)
Strand = Plus / Plus
Query: 1 atgcagaactatagaattctcagaccattcttctccgagctgcaactgcaactacgttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atgcagaactatagaattctcagaccattcttctccgagctgcaactgcaactacgttcc 176
Query: 61 tacgtcgttcctcgtgaccccttcccctccaaagtttcccactacctcacccgcgccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tacgtcgttcctcgtgaccccttcccctccaaagtttcccactacctcacccgcgccaag 236
Query: 121 ctcatcgactccattcgcctcactctccgttccgacaccgccaactcttcactccccact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ctcatcgactccattcgcctcactctccgttccgacaccgccaactcttcactccccact 296
Query: 181 ctcgtcaaccaccgtctcgtagactccttcgtcgtcacccacgccctccgttccgcccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctcgtcaaccaccgtctcgtagactccttcgtcgtcacccacgccctccgttccgcccct 356
Query: 241 tctgcagattccgcactctccctcctccatgcactcgaggatagcccctatttttcccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tctgcagattccgcactctccctcctccatgcactcgaggatagcccctatttttcccat 416
Query: 301 acccaaaacaccctccatgccctcgccaccgtgctcgccaagtccggtcgacgcgccgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 acccaaaacaccctccatgccctcgccaccgtgctcgccaagtccggtcgacgcgccgag 476
Query: 361 ctcaaatcactcttggatgatatcgaagcgaaacggttcggcaatgttaagttcagcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctcaaatcactcttggatgatatcgaagcgaaacggttcggcaatgttaagttcagcttg 536
Query: 421 atgaccctcttgcagtggcatgctgctgctagggatgttgactctgctcttagggtttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atgaccctcttgcagtggcatgctgctgctagggatgttgactctgctcttagggtttgg 596
Query: 481 gatcagtataggcttgacaatactcatgcctgcactgaatcttacaatgttgttatggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gatcagtataggcttgacaatactcatgcctgcactgaatcttacaatgttgttatggct 656
Query: 541 ctttgtgttgaaatggggaatgacgcggaggcggtgcgagtttttcaaaggatgattgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ctttgtgttgaaatggggaatgacgcggaggcggtgcgagtttttcaaaggatgattgat 716
Query: 601 gaagggtcgcttccgaattgcagaagctgtactattataatggagcaccttgtgaaatcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gaagggtcgcttccgaattgcagaagctgtactattataatggagcaccttgtgaaatcc 776
Query: 661 cagaaattggctgaagccatggaagtttttaacatgatgcctttgatgaggatcaaacgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 cagaaattggctgaagccatggaagtttttaacatgatgcctttgatgaggatcaaacgc 836
Query: 721 actggg 726
||||||
Sbjct: 837 actggg 842
>gnl|LJGI|TC80844 weakly similar to UniRef100_A7PV23 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (42%)
Length = 869
Score = 1193 bits (602), Expect = 0.0
Identities = 602/602 (100%)
Strand = Plus / Plus
Query: 1356 tgggctttccaaaaatgctgatgctgctctgaaggttttcaataatgatagaatactttg 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggctttccaaaaatgctgatgctgctctgaaggttttcaataatgatagaatactttg 60
Query: 1416 tgggcccatatcaaatgttaatctgatgcttctgtattcctctcttctaagaacattaac 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgggcccatatcaaatgttaatctgatgcttctgtattcctctcttctaagaacattaac 120
Query: 1476 caagtgtggaaggaattccgatgccctggatatgcttgatgagatgattttaaatggaat 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagtgtggaaggaattccgatgccctggatatgcttgatgagatgattttaaatggaat 180
Query: 1536 ttgtccagatatccaaacattttcaggtctaatgcactattttgcaaaccttggagacat 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgtccagatatccaaacattttcaggtctaatgcactattttgcaaaccttggagacat 240
Query: 1596 taaaacggtgcggaagctctttacaatggtcaggcagatcggtttagagccagatgctta 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaaacggtgcggaagctctttacaatggtcaggcagatcggtttagagccagatgctta 300
Query: 1656 tctgtataagatactaatcgaaggttattgcaactcaaaaagagctgcactggcatggaa 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctgtataagatactaatcgaaggttattgcaactcaaaaagagctgcactggcatggaa 360
Query: 1716 gctatttgaagacatgaagaattcaggtttcttgcctgactctgccaccaaaatgttgct 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctatttgaagacatgaagaattcaggtttcttgcctgactctgccaccaaaatgttgct 420
Query: 1776 agtgaagagtctctggaaagaagggaaacggaaagaggctgcagcagtggaagagagctg 1835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtgaagagtctctggaaagaagggaaacggaaagaggctgcagcagtggaagagagctg 480
Query: 1836 tgaggaaatcaagtcaccccttccacttgcattgcctggtcattcatggactgtcagttc 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaggaaatcaagtcaccccttccacttgcattgcctggtcattcatggactgtcagttc 540
Query: 1896 tgcagatctcacaagagtctacaatatttattcaaattcttttgcgtcaaatgatggtta 1955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgcagatctcacaagagtctacaatatttattcaaattcttttgcgtcaaatgatggtta 600
Query: 1956 ga 1957
||
Sbjct: 601 ga 602