Miyakogusa Predicted Gene

Lj2g3v1757300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1757300.1 Non Chatacterized Hit- tr|I1LHS2|I1LHS2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45386
PE,86.15,0,Vps39_2,Vacuolar sorting protein 39/Transforming growth
factor beta receptor-associated domain 2; CN,CUFF.37804.1
         (989 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36630.1 | Symbols: EMB2754 | Vacuolar sorting protein 39 | c...  1302   0.0  
AT1G22860.1 | Symbols:  | Vacuolar sorting protein 39 | chr1:808...    51   4e-06

>AT4G36630.1 | Symbols: EMB2754 | Vacuolar sorting protein 39 |
            chr4:17272088-17276524 REVERSE LENGTH=1000
          Length = 1000

 Score = 1302 bits (3370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1001 (64%), Positives = 787/1001 (78%), Gaps = 14/1001 (1%)

Query: 1    MVHSAYDSSELVPNFPGKIESVVTYDSKLLVGCSDGSLRIYSP----EPDSPDRVKPPYV 56
            MVH+AYDS +L+ + P +I++V +Y SKL  GC DGSLRIYSP      D  +  +  YV
Sbjct: 1    MVHNAYDSFQLLKDCPARIDAVESYGSKLFAGCYDGSLRIYSPPESSASDPSELHQETYV 60

Query: 57   LEKNLTGFAKKPIXXXXXXXXXXXXXXXXXXIAFHRLPSLETIAVITKAKGANVFCWDHR 116
            LEK + GF+KKPI                  IAFH LP+LET+AVITKAKGAN + WD R
Sbjct: 61   LEKTVAGFSKKPIVAMEVLASRELLLSLSESIAFHGLPNLETVAVITKAKGANAYSWDDR 120

Query: 117  RGFLCFARQKRVSIFRHDGGRGFVEVKEFGVPDMVKSMCWCGENICLGIRREYLILNASN 176
            RGFLCF+RQKRV +F+HDGG GFVEV+++GVPD VKS+ WCGENICLGI++EY+ILN +N
Sbjct: 121  RGFLCFSRQKRVCVFKHDGGGGFVEVRDYGVPDTVKSISWCGENICLGIKKEYVILNTAN 180

Query: 177  GALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLIPEGRICWSEAPLEVVIQ 236
            G LSEVF SGR+APPLV+SLPSGEL+LGKENIGVFVDQNGKL+   RICWSEAP  +VIQ
Sbjct: 181  GTLSEVFPSGRVAPPLVISLPSGELILGKENIGVFVDQNGKLLQTERICWSEAPTSIVIQ 240

Query: 237  KPYAIALLPRFVEIRSLRDPYPLIQTVVLRNVRHICQSNNSMILALDNSIHGLVPVPLGA 296
             PYAIALLPR VE+R LR PYPLIQT+VL+N+R + +SNN++I+ LDNS++ L PV +GA
Sbjct: 241  NPYAIALLPRRVEVRLLRSPYPLIQTIVLQNIRRLVKSNNAVIVGLDNSVYVLFPVSIGA 300

Query: 297  QIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHIRYAHYLFENGSYEEAMEQFLAS 356
            QIVQLTASGNFEEAL+LCK+LPP++SSLRAAKE SIH R+AHYLFENGSYEEAME FLAS
Sbjct: 301  QIVQLTASGNFEEALALCKVLPPDESSLRAAKESSIHTRFAHYLFENGSYEEAMEHFLAS 360

Query: 357  QVDITYVLSLYPSIILPKTSVVHETEKL-DIDGDVSYLSRGSSGLSDDMEPSSTSHMSES 415
            QVDIT+VLS+YPSIILPKT+++ + +K+ DI GD + LSRGSSG+SDDME SS  +  ES
Sbjct: 361  QVDITHVLSMYPSIILPKTTIIPQPDKMVDISGDEASLSRGSSGISDDMESSSPRYFLES 420

Query: 416  DENAALESKKVNHNTLMALIKYLQKKRYSFVEKATAEGTEEVVLDAVGDNFASYN--RFK 473
            ++NA LESKK++HNTLMALIKYL K+R + +EKAT+EGTEEV+ DAVG  + + +  + K
Sbjct: 421  EDNADLESKKMSHNTLMALIKYLLKRRPAVIEKATSEGTEEVISDAVGKTYGANDSSKSK 480

Query: 474  KTNKGRSSIPVSSGAREMASIXXXXXXXXXXXXGQSSVALELLRGVNYCDLKICEEILRK 533
            K++KGR  IP++SGAREMA+I            GQS  A+ELL+GVNY D+KICEEIL K
Sbjct: 481  KSSKGRGMIPLNSGAREMAAILDTALLQALLHTGQSGAAIELLKGVNYSDVKICEEILMK 540

Query: 534  GNHNVALLELFKCNSLHREALELLHKLVEESRS--SQSEITQRFKPEDIVEYLKPLCGTD 591
              +  ALLELFK NS+H EAL+LL++L +ES++  SQ+++TQ F PE I+EYLKPLC TD
Sbjct: 541  SKNYSALLELFKSNSMHHEALKLLNQLADESKTNQSQTDVTQIFSPELIIEYLKPLCRTD 600

Query: 592  PMLVLEFSMLVLESCPSQTIELFLSGNIPADMVNSYLKQHSPNMQATYLELMLAMNENAI 651
            PMLVLE+SMLVLESCP+QTI+LFLSGNI AD+VNSYLKQH+PNMQ  YLELM+AMN+ A+
Sbjct: 601  PMLVLEYSMLVLESCPTQTIDLFLSGNISADLVNSYLKQHAPNMQGRYLELMMAMNDTAV 660

Query: 652  SGNLQNEMVNIYLSEVLDWHADLSAQQNWDEKAYSPTRKKLLSALEGISGYNPEALLKRL 711
            SGNLQNEMV IYLSEVLD +A  SAQQ WDEK + P RKKLLSALE ISGY+P+ LLKRL
Sbjct: 661  SGNLQNEMVQIYLSEVLDLYAAKSAQQKWDEKDHPPERKKLLSALESISGYSPQPLLKRL 720

Query: 712  PRDALYEERATLLGKMNQHELALSLYVHKLHVPELALSYCDRVYES-THQPSVKSXXXXX 770
            PRDALYEERA +LGKMNQHELALS+YVHKLH P+LAL+YCDR+YES T+ PS K      
Sbjct: 721  PRDALYEERAVILGKMNQHELALSIYVHKLHAPDLALAYCDRIYESVTYLPSGKPSSNIY 780

Query: 771  XXXXXXXXXPRRTTARFEERITNLLSPQNTNLPK-VSSATSAKSKGGRGTKKVAEIEGAE 829
                     P+++   F +RI  L S ++++  K + S  S+K+KGGR +KK+  IEGAE
Sbjct: 781  LTVLQIYLNPKKSAKDFAKRIVALGSFESSDTTKMMDSVLSSKAKGGR-SKKIVAIEGAE 839

Query: 830  DTKVXXXXXXXXXXXXXXXE--FVEGGSTIMFTEVLDLLSRRWDRINGAQALKLLPKETK 887
            D +V               E    EG ST+M +EVLDLLS+RW+RINGAQALKLLP+ETK
Sbjct: 840  DMRVGLSSSTDSGRSDVDTEEPLEEGDSTVMISEVLDLLSQRWERINGAQALKLLPRETK 899

Query: 888  LQDLLSFIEPLLRKSSEMYRNCSVIKSLRHSENLQVKDELYNQRKAVVKITGDSICSLCH 947
            L +LL F+ PLLR SSE +RN SVIKSLR SENLQVK+ELY  RK V ++T +S+CSLC+
Sbjct: 900  LHNLLPFLAPLLRNSSEAHRNFSVIKSLRQSENLQVKEELYKHRKGVAQVTSESMCSLCN 959

Query: 948  KKLGTSVFAVYPNGSTLVHFVCFRDSQNMKAVSKGSQSRKR 988
            KK+GTSVFAVYPNG TLVHFVCFRDSQ MKAVSK +  R+R
Sbjct: 960  KKIGTSVFAVYPNGKTLVHFVCFRDSQGMKAVSKTTHGRRR 1000


>AT1G22860.1 | Symbols:  | Vacuolar sorting protein 39 |
           chr1:8083400-8088867 FORWARD LENGTH=961
          Length = 961

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 852 EGGSTIMFTEVLDLLSRRWDRINGAQALKLLPKETKLQDLLSFIEPLLRKSSEMYRNCSV 911
           + G   MF   + LL    + ++  Q L  L  +  L+     I  +LR     +R   +
Sbjct: 816 QNGKEPMFKAAVRLLHNHGESLDPLQVLDKLSPDMPLKLASDTILRMLRARVHHHRQGQI 875

Query: 912 IKSLRHSENLQVKDELYNQRKAVVKITGDSICSLCHKKLGTSVFAVYPNGSTLVHFVCFR 971
           + ++  + ++  +     +R   ++I  +S+C  C+ +LGT +FA+YP+  T+V + C+R
Sbjct: 876 VHNISRALDVDSRLARLEERSRHMQINDESLCDSCYARLGTKLFAMYPD-DTIVCYKCYR 934

Query: 972 DSQNMKAVS 980
                K+V+
Sbjct: 935 RLGESKSVT 943