Miyakogusa Predicted Gene

Lj2g3v1550460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1550460.1 Non Characterized Hit- tr|D8RDT7|D8RDT7_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,51.49,1e-18,UPF0114,Uncharacterised protein family UPF0114;
FAMILY NOT NAMED,NULL; seg,NULL,CUFF.37448.1
         (263 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g025750.1 | transmembrane protein, putative | HC | chr5:10...   321   5e-88
Medtr4g068770.1 | structural constituent of ribosome protein | H...   174   6e-44
Medtr4g082590.1 | transmembrane protein, putative | HC | chr4:32...   119   2e-27
Medtr3g032770.1 | transmembrane protein, putative | LC | chr3:10...    49   7e-06

>Medtr5g025750.1 | transmembrane protein, putative | HC |
           chr5:10503071-10498640 | 20130731
          Length = 267

 Score =  321 bits (822), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 171/250 (68%), Positives = 198/250 (79%), Gaps = 4/250 (1%)

Query: 1   MKLLQTLVRLPFTTTSPPASSWHSQNSILTSNSKRVSAFGRKGPRFPNCACTSSGPAVSS 60
           MKL Q LV+ PFT T  P+S  H QNSI +   KRVS  G K  RF +  C+SS  A  S
Sbjct: 1   MKLSQALVQKPFTLT--PSSLIHCQNSIFSCYGKRVSVLGYKSFRFSDFVCSSSSEASVS 58

Query: 61  PASNPSTQ-FAASDSGFDPVVTQTE-SGYHDRVEEGIEKVIYRFRFMAILGVFGSLFGSF 118
            ++  ++    AS+SGFD VV+  E  G  + +EEGIEKVIYR RF+AI+GVFGSL GS 
Sbjct: 59  SSAVNASSPLVASNSGFDSVVSHQEMPGKLEGIEEGIEKVIYRCRFLAIIGVFGSLIGSI 118

Query: 119 LCFMRGCTFVAESFMKYLVDRTKVIQMLIEAVDVYLLGTVMLVFGMGLYELFVSTLDSAS 178
           LCF++G TFVAESF+ YLV+R+KVIQMLIEA+D+YLLGTVMLVFGMGLYELFVS LDSAS
Sbjct: 119 LCFIKGSTFVAESFLGYLVNRSKVIQMLIEALDLYLLGTVMLVFGMGLYELFVSNLDSAS 178

Query: 179 SLSDKKPSGRSNLFGLFTLKERPKWLDINSVNELKTKIGHVIVMLLLIGLFDRSKKAAIN 238
           SL D+KPS RSNLFG+FTLKERPKWLDI +VN+LKTK+GHVIVMLLLIGL DRSKKA I 
Sbjct: 179 SLQDQKPSDRSNLFGIFTLKERPKWLDIKTVNDLKTKVGHVIVMLLLIGLIDRSKKATIQ 238

Query: 239 TPVDLLCFCA 248
           TPVDLLCFCA
Sbjct: 239 TPVDLLCFCA 248


>Medtr4g068770.1 | structural constituent of ribosome protein | HC |
           chr4:25791585-25794189 | 20130731
          Length = 262

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 91/197 (46%), Positives = 132/197 (67%), Gaps = 13/197 (6%)

Query: 57  AVSSPASNPSTQFAASDSGFDPVVTQTESGYHDRVEEGIEKVIYRFRFMAILGVFGSLFG 116
           +V S  + P+  +A +++  +P+V   ++      E  IE+VI+ FRF+A+L V GSL G
Sbjct: 51  SVPSRPTEPAFNYAFNNTNGNPLVRMVQN-----TESSIERVIFDFRFLALLAVGGSLAG 105

Query: 117 SFLCFMRGCTFVAESFMKYL------VDRTKVIQMLIEAVDVYLLGTVMLVFGMGLYELF 170
           S LCF+ GC ++ E++  Y       V   K++ +L+EA+DVYL GTVML+FGMGLY LF
Sbjct: 106 SLLCFLNGCVYIVEAYKVYWTSCVKGVHTGKMVLLLVEAIDVYLAGTVMLIFGMGLYGLF 165

Query: 171 VS-TLDSASSLSDKKPSGRSNLFGLFTLKERPKWLDINSVNELKTKIGHVIVMLLLIGLF 229
           +S T        D+   G S+LFG+F LKERPKW+ I+S++ELKTK+GHVIVM+LL+ +F
Sbjct: 166 ISNTPHDVQPAVDRALKG-SSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMF 224

Query: 230 DRSKKAAINTPVDLLCF 246
           +RSK   I T +DLL +
Sbjct: 225 ERSKLVVIATGLDLLSY 241


>Medtr4g082590.1 | transmembrane protein, putative | HC |
           chr4:32119330-32121070 | 20130731
          Length = 292

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 97/160 (60%), Gaps = 14/160 (8%)

Query: 95  IEKVIYRFRFMAILGVFGSLFGSFLCFMRGCTFVAESFMKYL------VDRTKVIQMLIE 148
           IEK I   RF  +  V GSL GS LCF+ GC  V +S+  YL      +++  ++ +LIE
Sbjct: 123 IEKAIMDCRFFTLFAVAGSLLGSVLCFLEGCVLVIKSYAHYLHMLSQPLNQGHLVHLLIE 182

Query: 149 AVDVYLLGTVMLVFGMGLYELFVSTLDSASSLSDKKPSGRSNLFGLFTLKERPKWLDINS 208
           A+D++L+GT +L+FG+GLY +FV +  +      K+ SG      L+ +K  P+W+ + S
Sbjct: 183 AIDMFLVGTALLMFGVGLYVMFVGSWTTGK---QKESSGL-----LYIMKSPPRWVGMQS 234

Query: 209 VNELKTKIGHVIVMLLLIGLFDRSKKAAINTPVDLLCFCA 248
           + + K+KIGH ++M+L +GL ++     + T +DL CF A
Sbjct: 235 IEQAKSKIGHAVMMILQVGLIEKFNDIPMVTGLDLACFAA 274


>Medtr3g032770.1 | transmembrane protein, putative | LC |
           chr3:10366302-10365353 | 20130731
          Length = 107

 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 8/58 (13%)

Query: 124 GCTFVAESFMKYL------VDRTKVIQMLIEAV--DVYLLGTVMLVFGMGLYELFVST 173
           GC ++ +++  Y       V   K++  L+EAV  DVYL GTVML+FGMGLYE   S 
Sbjct: 7   GCVYIVDAYKVYWSSCVKGVHTGKMVLRLVEAVAADVYLAGTVMLIFGMGLYETLFSN 64