Miyakogusa Predicted Gene
- Lj2g3v1455350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1455350.1 Non Chatacterized Hit- tr|I1L4S9|I1L4S9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,85.53,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; DYW_deaminase,NULL; TPR-like,NULL; PPR,gene.g41586.t1.1
(676 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 841 0.0
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 509 e-144
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 483 e-136
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 472 e-133
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 472 e-133
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 462 e-130
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-128
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 456 e-128
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 455 e-128
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 455 e-128
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 454 e-128
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 454 e-127
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 453 e-127
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 452 e-127
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 448 e-126
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 446 e-125
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 446 e-125
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 443 e-124
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 442 e-124
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 442 e-124
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 442 e-124
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 434 e-121
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 433 e-121
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 432 e-121
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 428 e-120
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 427 e-120
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-118
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 417 e-116
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 413 e-115
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-114
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-114
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 405 e-113
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 401 e-112
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-111
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 395 e-110
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 393 e-109
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 392 e-109
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 390 e-108
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 370 e-102
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 366 e-101
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 4e-99
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 4e-99
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 8e-99
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 6e-98
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 7e-98
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 354 1e-97
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 2e-97
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 4e-97
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 352 6e-97
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 349 4e-96
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 5e-96
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 8e-96
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 2e-95
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 5e-94
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 341 1e-93
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 3e-93
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 5e-93
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 333 2e-91
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 3e-91
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 9e-91
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 4e-90
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 8e-90
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 327 2e-89
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 3e-89
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 4e-89
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 325 6e-89
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 8e-89
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 3e-88
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 4e-88
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 1e-87
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 319 4e-87
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 2e-85
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 9e-85
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 311 1e-84
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 4e-84
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 304 1e-82
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 1e-82
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 7e-82
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 1e-81
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 8e-81
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 298 9e-81
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 6e-79
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 7e-79
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 7e-79
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 6e-78
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 1e-74
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 278 1e-74
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 2e-74
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 273 2e-73
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 2e-72
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 8e-72
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 267 1e-71
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 3e-71
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 1e-70
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 4e-70
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 261 1e-69
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 4e-67
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 1e-66
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 248 1e-65
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 9e-65
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 241 2e-63
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 7e-63
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 3e-60
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 229 4e-60
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 3e-59
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 6e-59
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 215 6e-56
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 7e-55
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 2e-54
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 8e-51
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 6e-50
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 9e-50
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 4e-49
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 4e-49
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 183 3e-46
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 5e-43
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 3e-38
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 4e-37
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 108 1e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 6e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 5e-22
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 101 2e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 4e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 1e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 5e-20
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 96 8e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 96 9e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 93 5e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 93 6e-19
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 86 7e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 83 8e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 7e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 76 8e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 75 2e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 73 6e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 71 3e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 69 1e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 69 1e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 66 7e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 66 8e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 64 3e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 64 3e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 58 2e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 58 3e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 3e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 50 4e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/675 (59%), Positives = 517/675 (76%), Gaps = 6/675 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
+S L+ QC +S++ ++ + AH++ SGF + G KL+D +KCG + AR++FD M E
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
RHIVTWNS+I+ + H +SK+AVE+Y M+ VLPD YT S++FKAFS+L L + +R+
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
HGLAV+LGLEV +VFV SALVDMY KF K R+A LV DRV EKDVVL TALI GY+Q G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
D EA++ F+ M+ +V+PNEYT AS L SCGNL D NG+LIHG +VKSG ES +ASQTS
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
LLTMY RCS+V+DS++VF + Y + V+WTS + GLVQNGREE+A+ FR+M+R S+ PN
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
FTLSS L+ CS+ AM E G QIH I TK G + +K AG+ LI+LYGKCG D AR VFD
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD 427
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
L+E+D++S+N+MIY+YAQNGFG EAL LF+R+ LGL PN VT +S+LLACNN+ LVEE
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEE 487
Query: 424 GCQLF-AFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNAC 482
GC+LF +F K+ I LT +H+ CM+DLLGR+ R EEA ML EV NPD+VLWRTLL+AC
Sbjct: 488 GCELFDSFRKD--KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSAC 545
Query: 483 RIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPA 542
++H ++EMAE+I RK+L++ PGD GT IL++NLYAS GKWN+VIEMK+ ++D+KLKK+PA
Sbjct: 546 KVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPA 605
Query: 543 RSWVDVDREVHTFMAGDM-SHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKM 601
SWV++++E HTFMAGD+ SHP + +I + L ELI+K+K LGY D V QD+ E K
Sbjct: 606 MSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKE 665
Query: 602 SSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKR 661
SL+ HSEKLAIAFA+W+ G +IRI KNLRVC DCHSWIK V+ + R+II RDSKR
Sbjct: 666 RSLHQHSEKLAIAFAVWRNVG--GSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKR 723
Query: 662 FHHFKGGLCSCKDYW 676
FHHF+ G CSC DYW
Sbjct: 724 FHHFRDGSCSCGDYW 738
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 509 bits (1311), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/675 (38%), Positives = 412/675 (61%), Gaps = 5/675 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMP 62
++ L+ C L + +H ++ SGFS L L + Y KC V EARK+FD MP
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER +V+WN++++ + +G ++ A+E+ +M E + P T ++ A S L L+ G+
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
HG A+ G + L V +++ALVDMYAK + A +FD +LE++VV + ++I Y Q+
Sbjct: 258 IHGYAMRSGFDSL-VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
EA+ +F++M+D VKP + ++ L +C +LGD G+ IH V+ GL+ V+
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
SL++MY +C V+ + +F +L + V+W + ++G QNGR A++ F +M +V P
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ FT S++ A + ++ + IH + + ++ N AL+++Y KCG + AR +F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
D+++E + + N+MI Y +GFG AL+LF+ ++K + PNGVTF+S++ AC+++GLVE
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNA 481
G + F MK N++IEL+ +H+ M+DLLGR+ R EA I ++ P V ++ +L A
Sbjct: 557 AGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
Query: 482 CRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSP 541
C+IH + AEK ++ +L P DGG H+LL N+Y +A W +V +++ ++ L+K+P
Sbjct: 617 CQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTP 676
Query: 542 ARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKM 601
S V++ EVH+F +G +HP + +I+ L +LI K GY PDT VL + + K
Sbjct: 677 GCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKE 735
Query: 602 SSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKR 661
L HSEKLAI+F L T TT I + KNLRVC DCH+ K+++L+TGR+I+ RD +R
Sbjct: 736 QLLSTHSEKLAISFGLLNTTAGTT-IHVRKNLRVCADCHNATKYISLVTGREIVVRDMQR 794
Query: 662 FHHFKGGLCSCKDYW 676
FHHFK G CSC DYW
Sbjct: 795 FHHFKNGACSCGDYW 809
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 261/502 (51%), Gaps = 16/502 (3%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
L+ +C+ SL LR + V +G + KL+ + + GSV EA ++F+ + +
Sbjct: 43 LLERCS---SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
V +++M+ +A++ + M + V P Y F+ + K + +R G+ HG
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG 185
L V G LD+F + L +MYAK ++ +A VFDR+ E+D+V + ++AGY+Q+G+
Sbjct: 160 LLVKSGFS-LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
ALE+ + M + +KP+ T+ S L + L G+ IHG+ ++SG +S V T+L+
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
MY++C +E + ++F+ + + V+W S + VQN + A+ +F++M+ V P
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
++ L AC+ E G IH ++ +LG++ N +LI++Y KC VD A S+F L
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 366 TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGC 425
LVS N+MI +AQNG +AL F +++ + P+ T++S++ A +
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 426 QLFAFMKN---NHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNAC 482
+ + + N+ +T T ++D+ + A ++ + ++ V W +++
Sbjct: 459 WIHGVVMRSCLDKNVFVT----TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514
Query: 483 RIHG----EIEMAEKIMRKVLQ 500
HG +E+ E++ + ++
Sbjct: 515 GTHGFGKAALELFEEMQKGTIK 536
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 149/305 (48%), Gaps = 6/305 (1%)
Query: 203 EYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFN 262
E+ A L C +L + + I + K+GL QT L++++ R V+++ +VF
Sbjct: 37 EHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 263 QLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREV 322
+ +V + + + G + + A+ F M V P + + +L+ C A V
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 323 GEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQ 382
G++IH + K G + A L N+Y KC V++AR VFD + E DLVS N+++ Y+Q
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 383 NGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTRE 442
NG AL++ K + + L P+ +T +S+L A + L+ G ++ + + L
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 443 HFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ-- 500
T ++D+ + E A L + + +VV W ++++A + + A I +K+L
Sbjct: 274 S-TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 501 LAPGD 505
+ P D
Sbjct: 333 VKPTD 337
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/677 (36%), Positives = 387/677 (57%), Gaps = 4/677 (0%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDE 60
N +SL+ C+ +L + +HA+ GF S + L++ Y KC + A F E
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
++V WN M+ A+ + + ++ M +E ++P+ YT+ +I K LG + G
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
+ H + + L+ +V S L+DMYAK K+ A + R KDVV +T +IAGY Q
Sbjct: 510 EQIHSQIIKTNFQ-LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
D +AL FR+M+DR ++ +E L + +++C L GQ IH SG S +
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
Q +L+T+YSRC +E+S F Q ++ W + V G Q+G E A+ VF M R +
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
N FT S ++A S A + G+Q+HA+ TK G + + ALI++Y KCG++ A
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
F ++ + VS N++I AY+++GFG EAL F ++ + PN VT + +L AC++ GL
Sbjct: 749 QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 808
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLL 479
V++G F M + + + EH+ C++D+L R+ A I E+ PD ++WRTLL
Sbjct: 809 VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
+AC +H +E+ E +L+L P D T++LL+NLYA + KW+ + +++ +KK
Sbjct: 869 SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKK 928
Query: 540 SPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEK 599
P +SW++V +H+F GD +HP A EI + +L ++A +GY D +L +L E+
Sbjct: 929 EPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQ 988
Query: 600 KMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDS 659
K ++ HSEKLAI+F L + T I + KNLRVC DCH+WIKFV+ ++ R+II RD+
Sbjct: 989 KDPIIFIHSEKLAISFGLL-SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDA 1047
Query: 660 KRFHHFKGGLCSCKDYW 676
RFHHF+GG CSCKDYW
Sbjct: 1048 YRFHHFEGGACSCKDYW 1064
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 238/477 (49%), Gaps = 7/477 (1%)
Query: 7 LITQCAHTK-SLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
L+ C T SL R +H+ ++ G S L KL D Y+ G + A K+FDEMPER
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG--RR 122
I TWN MI S + L+ M+ E V P+ TFS + +A G V + +
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQ 208
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H + GL V V + L+D+Y++ + A VFD + KD + A+I+G +++
Sbjct: 209 IHARILYQGLRDSTV-VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
+ EA+ +F +M + P Y +S L++C + G+ +HG ++K G S
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+L+++Y + + +F+ ++ VT+ + + GL Q G E A+ +F+ M + P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ TL+S++ ACS+ G+Q+HA TTKLG N AL+NLY KC +++ A F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
++V N M+ AY + ++F++++ + PN T+ SIL C G +E
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
G Q+ + + N +L + +ID+ + + + A ++ DVV W T++
Sbjct: 508 LGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 242/485 (49%), Gaps = 5/485 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+SS+++ C +SL +H V+ GFS + + L+ Y G++ A +F M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+R VT+N++I+ G ++A+EL+ M ++G+ PD+ T +++ A S G + G++
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H LG + + AL+++YAK + A F ++VVL+ ++ Y
Sbjct: 411 LHAYTTKLGFASNNK-IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
+ +FR+M + PN+YT S L +C LGD G+ IH I+K+ + +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
L+ MY++ ++ + + + A V+WT+ + G Q ++ A++ FR+M+ +
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ L++ + AC+ + G+QIHA G + AL+ LY +CG ++++ F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+ D ++ N+++ + Q+G EAL++F R+ + G+ N TF S + A + ++
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 423 EGCQLFAFM-KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
+G Q+ A + K ++ E E +I + + +A EV+ + V W ++NA
Sbjct: 710 QGKQVHAVITKTGYDSE--TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767
Query: 482 CRIHG 486
HG
Sbjct: 768 YSKHG 772
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/722 (36%), Positives = 406/722 (56%), Gaps = 64/722 (8%)
Query: 11 CAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTW 69
C S+ + HA + +GF S +G+ L+ Y +C S+++ARK+FDEM +V+W
Sbjct: 137 CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSW 196
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVE-GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
NS+I ++ GK K A+E++ M E G PD T + + LG G++ H AV
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFD--------------------------- 161
+ + ++FV + LVDMYAK M +A+ VF
Sbjct: 257 TSEM-IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 162 RVLEK--------DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASC 213
R+ EK DVV ++A I+GYAQ GL EAL V R+M+ +KPNE TL S L+ C
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 214 GNLGDSVNGQLIHGFIVK---------SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL 264
++G ++G+ IH + +K G E+ V +Q L+ MY++C V+ + +F+ L
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDTARAMFDSL 433
Query: 265 AYASH--VTWTSFVVGLVQNGREEVAVSVFREMIR--CSVSPNPFTLSSILQACSSRAMR 320
+ VTWT + G Q+G A+ + EM C PN FT+S L AC+S A
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 321 EVGEQIHAITTKLGMEGNKDA-----GAALINLYGKCGNVDKARSVFDVLTELDLVSVNS 375
+G+QIHA + ++A LI++Y KCG++ AR VFD + + V+ S
Sbjct: 494 RIGKQIHA----YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTS 549
Query: 376 MIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
++ Y +G+G EAL +F ++++G +GVT + +L AC+++G++++G + F MK
Sbjct: 550 LMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVF 609
Query: 436 NIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKI 494
+ EH+ C++DLLGR+ R A LI E+ P V+W L+ CRIHG++E+ E
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669
Query: 495 MRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHT 554
K+ +LA G++ LL+NLYA+AG+W V +++ +R +KK P SWV+ + T
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT 729
Query: 555 FMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIA 614
F GD +HP A EI+ +L + +++ K +GY P+T F L D+ +E+K L+ HSEKLA+A
Sbjct: 730 FFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALA 789
Query: 615 FALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKD 674
+ + T + AIRI KNLRVCGDCH+ +++ + DII RDS RFHHFK G CSCK
Sbjct: 790 YGILTT-PQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKG 848
Query: 675 YW 676
YW
Sbjct: 849 YW 850
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 161/555 (29%), Positives = 265/555 (47%), Gaps = 53/555 (9%)
Query: 15 KSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP--ERHIVTWNSM 72
K+++ ++ +H ++S G L LI YI G ++ A L P + + WNS+
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 98
Query: 73 ISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGL 132
I ++ +G + + + L+G M PD YTF +FKA E+ VR G AH L++V G
Sbjct: 99 IRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 158
Query: 133 EVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFR 192
+ +VFV +ALV MY++ + DA VFD + DVV + ++I YA+ G ALE+F
Sbjct: 159 -ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 193 EMVDR-RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRC 251
M + +P+ TL + L C +LG G+ +H F V S + + L+ MY++C
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 252 SMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVF------------------- 292
M++++ VF+ ++ V+W + V G Q GR E AV +F
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 293 ----------------REMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGME 336
R+M+ + PN TL S+L C+S G++IH K ++
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 337 GNKDAGA-------ALINLYGKCGNVDKARSVFDVLT--ELDLVSVNSMIYAYAQNGFGY 387
K+ LI++Y KC VD AR++FD L+ E D+V+ MI Y+Q+G
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 388 EALQLFKRI--KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT 445
+AL+L + + PN T L+AC + + G Q+ A+ N +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 446 CMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA-PG 504
C+ID+ + +A ++ + + + V W +L+ +HG E A I ++ ++
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 505 DGGTHILLTNLYASA 519
DG T LL LYA +
Sbjct: 578 DGVT--LLVVLYACS 590
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 472 bits (1214), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/686 (37%), Positives = 405/686 (59%), Gaps = 17/686 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF--SYCLLGHKLIDGYIKC-GSVAEARKLFDE 60
Y+++I C+++ + R ++ +G S +G LID ++K S A K+FD+
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
M E ++VTW MI+ + G ++A+ + +M++ G D +T S++F A +EL + G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFD---KMRDAHLVFDRVLEKDVVLFTALIAG 177
++ H A+ GL V DV +LVDMYAK + D VFDR+ + V+ +TALI G
Sbjct: 289 KQLHSWAIRSGL-VDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 178 YAQS-GLDGEALEVFREMVDR-RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE 235
Y ++ L EA+ +F EM+ + V+PN +T +S +CGNL D G+ + G K GL
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 236 SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM 295
S + S+++M+ + +ED+ + F L+ + V++ +F+ G +N E A + E+
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 296 IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNV 355
+ + FT +S+L ++ GEQIH+ KLG+ N+ ALI++Y KCG++
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 356 DKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLAC 415
D A VF+ + +++S SMI +A++GF L+ F ++ + G+ PN VT+++IL AC
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 416 NNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVL 474
++ GLV EG + F M +H I+ EH+ CM+DLL R+ +A IN + DV++
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 475 WRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRD 534
WRT L ACR+H E+ + RK+L+L P + +I L+N+YA AGKW + EM+ +++
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 535 LKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQD 594
L K SW++V ++H F GD +HP AH+I+D L LI + K GY PDT VL
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHK 765
Query: 595 LHEEKKMSS----LYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLT 650
L EE + LY HSEK+A+AF L T ++ +R+FKNLRVCGDCH+ +K+++ ++
Sbjct: 766 LEEENDEAEKERLLYQHSEKIAVAFGLIST-SKSRPVRVFKNLRVCGDCHNAMKYISTVS 824
Query: 651 GRDIIARDSKRFHHFKGGLCSCKDYW 676
GR+I+ RD RFHHFK G CSC DYW
Sbjct: 825 GREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 260/495 (52%), Gaps = 17/495 (3%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEM- 61
+SSL+ C + + VHA +I +L + LI Y K G A+A +F+ M
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 62 --PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
+R +V+W++M++ + ++G+ A++++ L G++P+ Y ++A+ +A S V
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDK-MRDAHLVFDRVLEKDVVLFTALIAGY 178
GR G + G DV V +L+DM+ K + +A+ VFD++ E +VV +T +I
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
Q G EA+ F +MV + +++TL+S ++C L + G+ +H + ++SGL V
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV 304
Query: 239 ASQTSLLTMYSRCSM---VEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEV-AVSVFRE 294
+ SL+ MY++CS V+D KVF+++ S ++WT+ + G ++N A+++F E
Sbjct: 305 --ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 295 MI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
MI + V PN FT SS +AC + + VG+Q+ K G+ N ++I+++ K
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 354 NVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
++ A+ F+ L+E +LVS N+ + +N +A +L I + L + TF S+L
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
Query: 414 ACNNAGLVEEGCQLFAFMKNNHNIELTREHFTC--MIDLLGRSKRFEEAAMLINEVTNPD 471
N G + +G Q+ + + + L+ C +I + + + A+ + N + N +
Sbjct: 483 GVANVGSIRKGEQIHSQVV---KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539
Query: 472 VVLWRTLLNACRIHG 486
V+ W +++ HG
Sbjct: 540 VISWTSMITGFAKHG 554
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 227/451 (50%), Gaps = 25/451 (5%)
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVLP-DAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
+ +I H++ G + AV M +G+ P D+ TFS++ K+ R G+ H +
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFD---RVLEKDVVLFTALIAGYAQSGLDG 185
+E D + ++L+ +Y+K A VF+ R ++DVV ++A++A Y +G +
Sbjct: 90 EFDIEP-DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGREL 148
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG-LESFVASQTSL 244
+A++VF E ++ + PN+Y + + +C N G++ GF++K+G ES V SL
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 245 LTMYSRC-SMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
+ M+ + + E++ KVF++++ + VTWT + +Q G A+ F +M+ +
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKC---GNVDKARS 360
FTLSS+ AC+ +G+Q+H+ + G+ D +L+++Y KC G+VD R
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVECSLVDMYAKCSADGSVDDCRK 326
Query: 361 VFDVLTELDLVSVNSMIYAYAQN-GFGYEALQLFKRIKKLG-LAPNGVTFISILLACNNA 418
VFD + + ++S ++I Y +N EA+ LF + G + PN TF S AC N
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 419 GLVEEGCQLF--AF---MKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVV 473
G Q+ AF + +N ++ +I + +S R E+A ++ ++V
Sbjct: 387 SDPRVGKQVLGQAFKRGLASNSSVA------NSVISMFVKSDRMEDAQRAFESLSEKNLV 440
Query: 474 LWRTLLNACRIHGEIEMAEKIMRKVLQLAPG 504
+ T L+ + E A K++ ++ + G
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/674 (35%), Positives = 399/674 (59%), Gaps = 8/674 (1%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERH 65
++ SL + VH + G L + + LI+ Y K AR +FD M ER
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD 380
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSEL--GLVRYGRRA 123
+++WNS+I+ +G +AV L+ +L G+ PD YT +++ KA S L GL ++
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL-SLSKQV 439
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H A+ + V D FV++AL+D Y++ M++A ++F+R D+V + A++AGY QS
Sbjct: 440 HVHAIKIN-NVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHD 497
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
+ L++F M + + +++TLA+ +CG L G+ +H + +KSG + + +
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
+L MY +C + + F+ + V WT+ + G ++NG EE A VF +M V P+
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
FT++++ +A S E G QIHA KL + G +L+++Y KCG++D A +F
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK 677
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
+ +++ + N+M+ AQ+G G E LQLFK++K LG+ P+ VTFI +L AC+++GLV E
Sbjct: 678 RIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSE 737
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNAC 482
+ M ++ I+ EH++C+ D LGR+ ++A LI ++ ++RTLL AC
Sbjct: 738 AYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAAC 797
Query: 483 RIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPA 542
R+ G+ E +++ K+L+L P D ++LL+N+YA+A KW+++ +T ++ K+KK P
Sbjct: 798 RVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPG 857
Query: 543 RSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMS 602
SW++V ++H F+ D S+ + I+ + ++I K GY P+T F L D+ EE+K
Sbjct: 858 FSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKER 917
Query: 603 SLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRF 662
+LYYHSEKLA+AF L T +T IR+ KNLRVCGDCH+ +K++ + R+I+ RD+ RF
Sbjct: 918 ALYYHSEKLAVAFGLLST-PPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRF 976
Query: 663 HHFKGGLCSCKDYW 676
H FK G+CSC DYW
Sbjct: 977 HRFKDGICSCGDYW 990
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 228/482 (47%), Gaps = 57/482 (11%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
++ +C H + LT +I++ LI Y KCGS+ AR++FD+MP+R +
Sbjct: 56 MLGKCTHARILTFEENPERFLINN----------LISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 67 VTWNSMISAHVSHGKS-----KQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
V+WNS+++A+ + +QA L+ + + V T S + K G V
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
HG A +GL+ D FVA ALV++Y KF K+++ ++F+ + +DVVL+ ++ Y +
Sbjct: 166 SFHGYACKIGLDG-DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
G EA+++ + PNE TL G+ DS GQ VKS AS
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD--DSDAGQ------VKSFANGNDASS 276
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
S + +F + + + +G+ + F +M+ V
Sbjct: 277 VSEI--------------IFRNKGLSEY----------LHSGQYSALLKCFADMVESDVE 312
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
+ T +L +G+Q+H + KLG++ +LIN+Y K AR+V
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
FD ++E DL+S NS+I AQNG EA+ LF ++ + GL P+ T S+L A A +
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA---ASSL 429
Query: 422 EEGCQLFAFMKNNHNIELTR--EHF--TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRT 477
EG L + + H I++ + F T +ID R++ +EA +L E N D+V W
Sbjct: 430 PEGLSL-SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNA 487
Query: 478 LL 479
++
Sbjct: 488 MM 489
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 225/493 (45%), Gaps = 45/493 (9%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYC-LLGHKLIDGYIKCGSVAEARKLFDEMPE 63
S ++ C H+ + + H + G + L++ Y+K G V E + LF+EMP
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY 208
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAF---SELGLVRYG 120
R +V WN M+ A++ G ++A++L G+ P+ T + + S+ G V+
Sbjct: 209 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVK-- 266
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
F DA V +++ ++ Y
Sbjct: 267 ----------------------------SFANGNDASSV------SEIIFRNKGLSEYLH 292
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
SG L+ F +MV+ V+ ++ T LA+ + GQ +H +K GL+ +
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV 352
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
SL+ MY + + VF+ ++ ++W S + G+ QNG E AV +F +++RC +
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 301 SPNPFTLSSILQACSSRAM-REVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
P+ +T++S+L+A SS + +Q+H K+ + ALI+ Y + + +A
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
+F+ DLV+ N+M+ Y Q+ G++ L+LF + K G + T ++ C
Sbjct: 473 ILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 420 LVEEGCQLFAF-MKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTL 478
+ +G Q+ A+ +K+ ++++L + ++D+ + A + + PD V W T+
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 589
Query: 479 LNACRIHGEIEMA 491
++ C +GE E A
Sbjct: 590 ISGCIENGEEERA 602
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 345 LINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFG-----YEALQLFKRIKKL 399
LI++Y KCG++ AR VFD + + DLVS NS++ AYAQ+ +A LF+ +++
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 400 GLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTC--MIDLLGRSKRF 457
+ + +T +L C ++G V + I L + F ++++ + +
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYVWASESFHGYA---CKIGLDGDEFVAGALVNIYLKFGKV 196
Query: 458 EEAAMLINEVTNPDVVLWRTLLNA 481
+E +L E+ DVVLW +L A
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKA 220
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/659 (37%), Positives = 386/659 (58%), Gaps = 11/659 (1%)
Query: 23 VHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
VH V+ +G + + + LI+ Y+KCG+V +AR LFD+ + +VTWNSMIS + ++G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 82 SKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVAS 141
+A+ ++ +M + V +F+++ K + L +R+ + H V G + D + +
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRT 334
Query: 142 ALVDMYAKFDKMRDAHLVFDRV-LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVK 200
AL+ Y+K M DA +F + +VV +TA+I+G+ Q+ EA+++F EM + V+
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 201 PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKV 260
PNE+T + L + + S +H +VK+ E T+LL Y + VE++ KV
Sbjct: 395 PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 261 FNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS-SRAM 319
F+ + V W++ + G Q G E A+ +F E+ + + PN FT SSIL C+ + A
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 320 REVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYA 379
G+Q H K ++ + +AL+ +Y K GN++ A VF E DLVS NSMI
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 380 YAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIEL 439
YAQ+G +AL +FK +KK + +GVTFI + AC +AGLVEEG + F M + I
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 440 TREHFTCMIDLLGRSKRFEEAAMLINEVTNP-DVVLWRTLLNACRIHGEIEMAEKIMRKV 498
T+EH +CM+DL R+ + E+A +I + NP +WRT+L ACR+H + E+ K+
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 499 LQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAG 558
+ + P D ++LL+N+YA +G W + +++ + + +KK P SW++V + ++F+AG
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 750
Query: 559 DMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALW 618
D SHP +I+ L +L + K LGY PDT +VLQD+ +E K + L HSE+LAIAF L
Sbjct: 751 DRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLI 810
Query: 619 KTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKG-GLCSCKDYW 676
T + + + I KNLRVCGDCH IK + + R+I+ RDS RFHHF G+CSC D+W
Sbjct: 811 AT-PKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 231/473 (48%), Gaps = 14/473 (2%)
Query: 23 VHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKS 82
++A+ ++ YC G + + A LFD+ P R ++ S++ G++
Sbjct: 22 IYANGVAQVRIYCF-------GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRT 74
Query: 83 KQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASA 142
++A L+ N+ G+ D FS++ K + L +GR+ H + G + DV V ++
Sbjct: 75 QEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVGTS 133
Query: 143 LVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPN 202
LVD Y K +D VFD + E++VV +T LI+GYA++ ++ E L +F M + +PN
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 203 EYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFN 262
+T A+ L G G +H +VK+GL+ + SL+ +Y +C V + +F+
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD 253
Query: 263 QLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREV 322
+ S VTW S + G NG + A+ +F M V + + +S+++ C++
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 323 GEQIHAITTKLGMEGNKDAGAALINLYGKC-GNVDKARSVFDVLTELDLVSVNSMIYAYA 381
EQ+H K G +++ AL+ Y KC +D R ++ ++VS +MI +
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Query: 382 QNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTR 441
QN EA+ LF +K+ G+ PN T+ IL A E Q+ +K N+ E +
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV---VKTNY--ERSS 428
Query: 442 EHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKI 494
T ++D + + EEAA + + + + D+V W +L GE E A K+
Sbjct: 429 TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKM 481
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/708 (34%), Positives = 394/708 (55%), Gaps = 39/708 (5%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
+LI KS + + +HA I + +I Y + EA LF +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
++ W S+I +A+ + M G PD F ++ K+ + + +R+G HG
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 126 LAVVLGLEVLDVFVASALVDMYAK-------------FDKMRD----------------- 155
V LG++ D++ +AL++MYAK FD+M
Sbjct: 130 FIVRLGMDC-DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 156 ------AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLAST 209
VF+ + KDVV + +IAGYAQSG+ +AL + REM +KP+ +TL+S
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 210 LASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH 269
L D + G+ IHG++++ G++S V +SL+ MY++ + +EDS +VF++L
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 270 VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAI 329
++W S V G VQNGR A+ +FR+M+ V P SS++ AC+ A +G+Q+H
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA 389
+ G N +AL+++Y KCGN+ AR +FD + LD VS ++I +A +G G+EA
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 390 LQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMID 449
+ LF+ +K+ G+ PN V F+++L AC++ GLV+E F M + + EH+ + D
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488
Query: 450 LLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGT 508
LLGR+ + EEA I+++ P +W TLL++C +H +E+AEK+ K+ + + G
Sbjct: 489 LLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGA 548
Query: 509 HILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEI 568
++L+ N+YAS G+W ++ +++ +R L+K PA SW+++ + H F++GD SHP +I
Sbjct: 549 YVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
Query: 569 FDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIR 628
+ L ++E+ + GY DT VL D+ EE K L+ HSE+LA+AF + T TT IR
Sbjct: 609 NEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT-IR 667
Query: 629 IFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
+ KN+R+C DCH IKF++ +T R+II RD+ RFHHF G CSC DYW
Sbjct: 668 VTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+SS+I CAH +L + +H +V+ GF S + L+D Y KCG++ ARK+FD M
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLV 117
V+W ++I H HG +AV L+ M +GV P+ F A+ A S +GLV
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/541 (40%), Positives = 349/541 (64%), Gaps = 7/541 (1%)
Query: 137 VFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVD 196
+F+ + L++MY KF+ + DAH +FD++ +++V+ +T +I+ Y++ + +ALE+ M+
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 197 RRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED 256
V+PN YT +S L SC + D +++H I+K GLES V +++L+ ++++ ED
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 257 SVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSS 316
++ VF+++ + W S + G QN R +VA+ +F+ M R TL+S+L+AC+
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 317 RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSM 376
A+ E+G Q H K + + AL+++Y KCG+++ A VF+ + E D+++ ++M
Sbjct: 273 LALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 377 IYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHN 436
I AQNG+ EAL+LF+R+K G PN +T + +L AC++AGL+E+G F MK +
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 437 IELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIM 495
I+ REH+ CMIDLLG++ + ++A L+NE+ PD V WRTLL ACR+ + +AE
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 496 RKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTF 555
+KV+ L P D GT+ LL+N+YA++ KW+ V E++T +RD +KK P SW++V++++H F
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAF 510
Query: 556 MAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAF 615
+ GD SHP+ E+ L++LI + +GY P+T FVLQDL E+ SL +HSEKLA+AF
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570
Query: 616 ALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDY 675
L T IRI KNLR+CGDCH + K + L R I+ RD R+HHF+ G CSC DY
Sbjct: 571 GL-MTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDY 629
Query: 676 W 676
W
Sbjct: 630 W 630
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 203/379 (53%), Gaps = 9/379 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
YS LI C +++ + H+ +G L + LI+ Y+K + +A +LFD+MP
Sbjct: 64 YSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP 123
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+R++++W +MISA+ ++A+EL ML + V P+ YT+S++ ++ + + VR
Sbjct: 124 QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM--- 180
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H + GLE DVFV SAL+D++AK + DA VFD ++ D +++ ++I G+AQ+
Sbjct: 181 LHCGIIKEGLES-DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
ALE+F+ M + TL S L +C L G H IVK + +
Sbjct: 240 RSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLIL--NN 297
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+L+ MY +C +ED+++VFNQ+ +TW++ + GL QNG + A+ +F M P
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKP 357
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKL-GMEGNKDAGAALINLYGKCGNVDKARSV 361
N T+ +L ACS + E G KL G++ ++ +I+L GK G +D A +
Sbjct: 358 NYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKL 417
Query: 362 FDVL-TELDLVSVNSMIYA 379
+ + E D V+ +++ A
Sbjct: 418 LNEMECEPDAVTWRTLLGA 436
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 268/757 (35%), Positives = 406/757 (53%), Gaps = 101/757 (13%)
Query: 19 TLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHV 77
T + VH VI SG + + L + L++ Y K G ARKLFDEMP R +WN+++SA+
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 78 SHG-------------------------------KSKQAVELYGNMLVEGVLPDAYTFSA 106
G + +A+ + G+M+ EG+ P +T +
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 107 IFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAK----------FDKM--R 154
+ + + + G++ H V LGL +V V+++L++MYAK FD+M R
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRG-NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 155 D-------------------AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
D A F+++ E+D+V + ++I+G+ Q G D AL++F +M+
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 196 -DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMV 254
D + P+ +TLAS L++C NL G+ IH IV +G + +L++MYSRC V
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 255 EDSVKVFNQ---------------------------------LAYASHVTWTSFVVGLVQ 281
E + ++ Q L V WT+ +VG Q
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 282 NGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDA 341
+G A+++FR M+ PN +TL+++L SS A G+QIH K G +
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450
Query: 342 GAALINLYGKCGNVDKARSVFDVL-TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
ALI +Y K GN+ A FD++ E D VS SMI A AQ+G EAL+LF+ + G
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA 460
L P+ +T++ + AC +AGLV +G Q F MK+ I T H+ CM+DL GR+ +EA
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 570
Query: 461 AMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASA 519
I ++ PDVV W +LL+ACR+H I++ + ++L L P + G + L NLY++
Sbjct: 571 QEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 630
Query: 520 GKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKA 579
GKW + +++ +++D ++KK SW++V +VH F D +HP +EI+ + ++ ++
Sbjct: 631 GKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEI 690
Query: 580 KTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDC 639
K +GY PDT VL DL EE K L +HSEKLAIAF L T +TT +RI KNLRVC DC
Sbjct: 691 KKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTT-LRIMKNLRVCNDC 749
Query: 640 HSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
H+ IKF++ L GR+II RD+ RFHHFK G CSC+DYW
Sbjct: 750 HTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 203/456 (44%), Gaps = 86/456 (18%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGF--------------SYC--------LLGHK-- 40
+S+++ CA+ + L + +H+H++++GF S C L+ +
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 41 ----------LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYG 90
L+DGYIK G + +A+ +F + +R +V W +MI + HG +A+ L+
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 91 NMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKF 150
+M+ G P++YT +A+ S L + +G++ HG AV G E+ V V++AL+ MYAK
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG-EIYSVSVSNALITMYAKA 461
Query: 151 DKMRDAHLVFDRV-LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLAST 209
+ A FD + E+D V +T++I AQ G EALE+F M+ ++P+ T
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 210 LASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH 269
++C H +V G + F M++D K+ L++ +
Sbjct: 522 FSAC-----------THAGLVNQGRQYF--------------DMMKDVDKIIPTLSHYAC 556
Query: 270 VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAI 329
+ GL+Q +E + + + P+ T S+L AC ++G ++ A
Sbjct: 557 MVDLFGRAGLLQEAQEFIE--------KMPIEPDVVTWGSLLSACRVHKNIDLG-KVAAE 607
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE--------LDLVSVNSMIYAYA 381
L N A +AL NLY CG ++A + + + + V ++ +
Sbjct: 608 RLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFG 667
Query: 382 --------QNGFGYEALQLFKRIKKLGLAPNGVTFI 409
+N +++ IKK+G P+ + +
Sbjct: 668 VEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL 703
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 454 bits (1168), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/714 (35%), Positives = 410/714 (57%), Gaps = 53/714 (7%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGF---SYCLLGHKLIDGYIKCG---SVAEARKLFD 59
SL+ C K+L +LR +HA +I G +Y L KLI+ I + A +F
Sbjct: 38 SLLHNC---KTLQSLRIIHAQMIKIGLHNTNYAL--SKLIEFCILSPHFEGLPYAISVFK 92
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
+ E +++ WN+M H A++LY M+ G+LP++YTF + K+ ++ +
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 152
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALI---- 175
G++ HG + LG + LD++V ++L+ MY + ++ DAH VFD+ +DVV +TALI
Sbjct: 153 GQQIHGHVLKLGCD-LDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 176 ---------------------------AGYAQSGLDGEALEVFREMVDRRVKPNEYTLAS 208
+GYA++G EALE+F++M+ V+P+E T+ +
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271
Query: 209 TLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYAS 268
+++C G G+ +H +I G S + +L+ +YS+C +E + +F +L Y
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331
Query: 269 HVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA 328
++W + + G + A+ +F+EM+R +PN T+ SIL AC+ ++G IH
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 329 ITTKL--GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFG 386
K G+ +LI++Y KCG+++ A VF+ + L S N+MI+ +A +G
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 387 YEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTC 446
+ LF R++K+G+ P+ +TF+ +L AC+++G+++ G +F M ++ + EH+ C
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 511
Query: 447 MIDLLGRSKRFEEAAMLINEVTN-PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGD 505
MIDLLG S F+EA +IN + PD V+W +LL AC++HG +E+ E ++++ P +
Sbjct: 512 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 571
Query: 506 GGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRA 565
G+++LL+N+YASAG+WN+V + + + D +KK P S +++D VH F+ GD HPR
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 631
Query: 566 HEIFDMLHE---LIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCG 622
EI+ ML E L+EKA G+ PDT VLQ++ EE K +L +HSEKLAIAF L T
Sbjct: 632 REIYGMLEEMEVLLEKA---GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST-K 687
Query: 623 RTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
T + I KNLRVC +CH K ++ + R+IIARD RFHHF+ G+CSC DYW
Sbjct: 688 PGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/688 (35%), Positives = 399/688 (57%), Gaps = 18/688 (2%)
Query: 6 SLITQCAH---TKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
S++T C++ + L + VHA+ + G + + L+ Y K G +A ++ L
Sbjct: 204 SVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
R +VTWN+++S+ + + +A+E M++EGV PD +T S++ A S L ++R G+
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H A+ G + FV SALVDMY ++ VFD + ++ + L+ A+IAGY+Q+
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 383
Query: 183 LDGEALEVFREMVDRR-VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
D EAL +F M + + N T+A + +C G + IHGF+VK GL+ Q
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM------ 295
+L+ MYSR ++ ++++F ++ VTW + + G V + E A+ + +M
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 296 -----IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYG 350
R S+ PN TL +IL +C++ + G++IHA K + + G+AL+++Y
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 351 KCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFIS 410
KCG + +R VFD + + ++++ N +I AY +G G EA+ L + + G+ PN VTFIS
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 411 ILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNP 470
+ AC+++G+V+EG ++F MK ++ +E + +H+ C++DLLGR+ R +EA L+N +
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 471 --DVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEM 528
W +LL A RIH +E+ E + ++QL P ++LL N+Y+SAG W++ E+
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 529 KTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDT 588
+ +++ ++K P SW++ EVH F+AGD SHP++ ++ L L E+ + GY PDT
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDT 803
Query: 589 RFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTL 648
VL ++ E++K L HSEKLAIAF + T T IR+ KNLRVC DCH KF++
Sbjct: 804 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNT-SPGTIIRVAKNLRVCNDCHLATKFISK 862
Query: 649 LTGRDIIARDSKRFHHFKGGLCSCKDYW 676
+ R+II RD +RFH FK G CSC DYW
Sbjct: 863 IVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 259/517 (50%), Gaps = 27/517 (5%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY--CLLGHKLIDGYIKCGSVAEARKLFDEM 61
+ +L+ A + + + +HAHV G+ + + L++ Y KCG K+FD +
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGL---VR 118
ER+ V+WNS+IS+ S K + A+E + ML E V P ++T ++ A S L + +
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G++ H + G L+ F+ + LV MY K K+ + ++ +D+V + +++
Sbjct: 220 MGKQVHAYGLRKG--ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL---E 235
Q+ EALE REMV V+P+E+T++S L +C +L G+ +H + +K+G
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 236 SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM 295
SFV S +L+ MY C V +VF+ + W + + G QN ++ A+ +F M
Sbjct: 338 SFVGS--ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 296 IRCS-VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGN 354
+ + N T++ ++ AC E IH K G++ ++ L+++Y + G
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGK 455
Query: 355 VDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKL-----------GLAP 403
+D A +F + + DLV+ N+MI Y + +AL L +++ L L P
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 404 NGVTFISILLACNNAGLVEEGCQLFAF-MKNNHNIELTREHFTCMIDLLGRSKRFEEAAM 462
N +T ++IL +C + +G ++ A+ +KNN ++ + ++D+ + + +
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRK 573
Query: 463 LINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVL 499
+ +++ +V+ W ++ A +HG + A ++R ++
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 212/421 (50%), Gaps = 13/421 (3%)
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
W ++ + V ++AV Y +M+V G+ PD Y F A+ KA ++L + G++ H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEAL 188
G V V VA+ LV++Y K + VFDR+ E++ V + +LI+ AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 189 EVFREMVDRRVKPNEYTLASTLASCGNLGDS---VNGQLIHGFIVKSG-LESFVASQTSL 244
E FR M+D V+P+ +TL S + +C NL + G+ +H + ++ G L SF+ + +L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIIN--TL 242
Query: 245 LTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNP 304
+ MY + + S + VTW + + L QN + A+ REM+ V P+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 305 FTLSSILQACSSRAMREVGEQIHAITTKLG-MEGNKDAGAALINLYGKCGNVDKARSVFD 363
FT+SS+L ACS M G+++HA K G ++ N G+AL+++Y C V R VFD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK-LGLAPNGVTFISILLACNNAGLVE 422
+ + + N+MI Y+QN EAL LF +++ GL N T ++ AC +G
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 423 EGCQLFAFMKNNHNIELTREHF--TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLN 480
+ F+ L R+ F ++D+ R + + A + ++ + D+V W T++
Sbjct: 423 RKEAIHGFVVKRG---LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 481 A 481
Sbjct: 480 G 480
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/672 (35%), Positives = 395/672 (58%), Gaps = 11/672 (1%)
Query: 14 TKSLTTLRAVHA------HVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
+KS ++LR+VH ++ SGF +G+ L+ Y+K V ARK+FDEM ER +
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
++WNS+I+ +VS+G +++ + ++ MLV G+ D T ++F ++ L+ GR H +
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGE 186
V D F + L+DMY+K + A VF + ++ VV +T++IAGYA+ GL GE
Sbjct: 322 GVKACFSREDRF-CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 187 ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLT 246
A+++F EM + + P+ YT+ + L C G+ +H +I ++ L + +L+
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 247 MYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS-VSPNPF 305
MY++C ++++ VF+++ ++W + + G +N A+S+F ++ SP+
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
T++ +L AC+S + + G +IH + G ++ +L+++Y KCG + A +FD +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 366 TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGC 425
DLVS MI Y +GFG EA+ LF ++++ G+ + ++F+S+L AC+++GLV+EG
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 426 QLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLI-NEVTNPDVVLWRTLLNACRI 484
+ F M++ IE T EH+ C++D+L R+ +A I N PD +W LL CRI
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 485 HGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARS 544
H ++++AEK+ KV +L P + G ++L+ N+YA A KW QV ++ I L+K+P S
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 545 WVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSL 604
W+++ V+ F+AGD S+P I L ++ + GYSP T++ L D E +K +L
Sbjct: 741 WIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEAL 800
Query: 605 YYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHH 664
HSEKLA+A + + G IR+ KNLRVCGDCH KF++ LT R+I+ RDS RFH
Sbjct: 801 CGHSEKLAMALGIISS-GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQ 859
Query: 665 FKGGLCSCKDYW 676
FK G CSC+ +W
Sbjct: 860 FKDGHCSCRGFW 871
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 248/483 (51%), Gaps = 4/483 (0%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
S++ CA +KSL + V + +GF LG KL Y CG + EA ++FDE+
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
+ WN +++ G ++ L+ M+ GV D+YTFS + K+FS L V G + H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLD 184
G + G + V ++LV Y K ++ A VFD + E+DV+ + ++I GY +GL
Sbjct: 219 GFILKSGFGERNS-VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSL 244
+ L VF +M+ ++ + T+ S A C + G+ +H VK+ +L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 245 LTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNP 304
L MYS+C ++ + VF +++ S V++TS + G + G AV +F EM +SP+
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 305 FTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDV 364
+T++++L C+ + + G+++H + + + AL+++Y KCG++ +A VF
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 365 LTELDLVSVNSMIYAYAQNGFGYEALQLFK-RIKKLGLAPNGVTFISILLACNNAGLVEE 423
+ D++S N++I Y++N + EAL LF +++ +P+ T +L AC + ++
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACR 483
G ++ ++ N R ++D+ + A ML +++ + D+V W ++
Sbjct: 518 GREIHGYIMRNGYFS-DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 484 IHG 486
+HG
Sbjct: 577 MHG 579
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 212/420 (50%), Gaps = 10/420 (2%)
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP-DAYTFSAIFKAFSELGLVRYGR 121
+R + N+ + G + AV+L + V G D T ++ + ++ ++ G+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
G V+D + S L MY +++A VFD V + + + L+ A+S
Sbjct: 115 EVDNFIRGNGF-VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKS 173
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
G ++ +F++M+ V+ + YT + S +L G+ +HGFI+KSG +
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
SL+ Y + V+ + KVF+++ ++W S + G V NG E +SVF +M+ +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
+ T+ S+ C+ + +G +H+I K L+++Y KCG++D A++V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F +++ +VS SMI YA+ G EA++LF+ +++ G++P+ T ++L C L+
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 422 EEGCQLFAFMKNNHNIELTREHF--TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
+EG ++ ++K N +L + F ++D+ + +EA ++ +E+ D++ W T++
Sbjct: 414 DEGKRVHEWIKEN---DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII 470
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 188/427 (44%), Gaps = 60/427 (14%)
Query: 205 TLASTLASCGNLGDSVNGQLIHGFIVKSG--LESFVASQTSLLTMYSRCSMVEDSVKVFN 262
TL S L C + +G+ + FI +G ++S + S+ SL MY+ C ++++ +VF+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSL--MYTNCGDLKEASRVFD 153
Query: 263 QLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREV 322
++ + W + L ++G ++ +F++M+ V + +T S + ++ SS
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 323 GEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQ 382
GEQ+H K G G +L+ Y K VD AR VFD +TE D++S NS+I Y
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 383 NGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEG------------------ 424
NG + L +F ++ G+ + T +S+ C ++ L+ G
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 425 CQLFAFMKN-----NHNIELTRE-------HFTCMIDLLGRSKRFEEAAMLINEV----T 468
C M + + + RE +T MI R EA L E+
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 469 NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTN----LYASAGKWNQ 524
+PDV +LN C + ++ +++ + + D G I ++N +YA G
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE---NDLGFDIFVSNALMDMYAKCG---S 447
Query: 525 VIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGY 584
+ E + ++++K SW +T + G + A+E + + L+E+ + +
Sbjct: 448 MQEAELVFSEMRVK--DIISW-------NTIIGGYSKNCYANEALSLFNLLLEEKR---F 495
Query: 585 SPDTRFV 591
SPD R V
Sbjct: 496 SPDERTV 502
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/656 (35%), Positives = 379/656 (57%), Gaps = 3/656 (0%)
Query: 23 VHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
+H+ ++ G+ S +G LI+ Y CGSV AR +F+ + + IV W ++S +V +G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 82 SKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVAS 141
+ +++L M + G +P+ YTF KA LG + + HG ++ VLD V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG-QILKTCYVLDPRVGV 286
Query: 142 ALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKP 201
L+ +Y + M DA VF+ + + DVV ++ +IA + Q+G EA+++F M + V P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 202 NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF 261
NE+TL+S L C S G+ +HG +VK G + + +L+ +Y++C ++ +VK+F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 262 NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
+L+ + V+W + +VG G A S+FRE +R VS T SS L AC+S A +
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 322 VGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYA 381
+G Q+H + K +LI++Y KCG++ A+SVF+ + +D+ S N++I Y+
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYS 526
Query: 382 QNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTR 441
+G G +AL++ +K PNG+TF+ +L C+NAGL+++G + F M +H IE
Sbjct: 527 THGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCL 586
Query: 442 EHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
EH+TCM+ LLGRS + ++A LI + P V++WR +L+A E A + ++L+
Sbjct: 587 EHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILK 646
Query: 501 LAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDM 560
+ P D T++L++N+YA A +W V ++ +++++ +KK P SW++ +VH F G
Sbjct: 647 INPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLS 706
Query: 561 SHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKT 620
HP I ML L KA GY PD VL D+ +E+K L+ HSE+LA+A+ L +
Sbjct: 707 DHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRM 766
Query: 621 CGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
I I KNLR+C DCHS +K ++ + RD++ RD RFHHF G+CSC D+W
Sbjct: 767 PSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 239/494 (48%), Gaps = 9/494 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMP 62
Y +++ +C + +A+H ++ G L L++ Y+K G +A LFDEMP
Sbjct: 52 YGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP 111
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER+ V++ ++ + + + LY + EG + + F++ K F L
Sbjct: 112 ERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H V LG + + FV +AL++ Y+ + A VF+ +L KD+V++ +++ Y ++G
Sbjct: 168 LHSPIVKLGYDS-NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
++L++ M PN YT + L + LG + +HG I+K+
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
LL +Y++ + D+ KVFN++ V W+ + QNG AV +F M V P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
N FTLSSIL C+ +GEQ+H + K+G + + ALI++Y KC +D A +F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
L+ + VS N++I Y G G +A +F+ + ++ VTF S L AC + ++
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 423 EGCQLFAF-MKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
G Q+ +K N+ ++ + +ID+ + + A + NE+ DV W L++
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSN--SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Query: 482 CRIHGEIEMAEKIM 495
HG A +I+
Sbjct: 525 YSTHGLGRQALRIL 538
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 7/367 (1%)
Query: 135 LDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM 194
LD+F + L++ Y K +DA +FD + E++ V F L GYA G + RE
Sbjct: 82 LDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHRE- 140
Query: 195 VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMV 254
+ P+ +T S L +L + +H IVK G +S +L+ YS C V
Sbjct: 141 -GHELNPHVFT--SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 255 EDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQAC 314
+ + VF + V W V V+NG E ++ + M PN +T + L+A
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 315 SSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVN 374
+ + +H K + G L+ LY + G++ A VF+ + + D+V +
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWS 317
Query: 375 SMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF-MKN 433
MI + QNGF EA+ LF R+++ + PN T SIL C G QL +K
Sbjct: 318 FMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV 377
Query: 434 NHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEK 493
++++ + +ID+ + ++ + A L E+++ + V W T++ GE A
Sbjct: 378 GFDLDIYVSN--ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 494 IMRKVLQ 500
+ R+ L+
Sbjct: 436 MFREALR 442
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 25/288 (8%)
Query: 202 NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF 261
+ + + L C D ++ + IH I+K G + + LL Y + +D++ +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 262 NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
+++ ++V++ V L Q + + ++ + R NP +S L+ S E
Sbjct: 108 DEMPERNNVSF----VTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 322 VGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYA 381
+ +H+ KLG + N GAALIN Y CG+VD AR+VF+ + D+V ++ Y
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 382 QNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTR 441
+NG+ ++L+L ++ G PN TF + L A G F F K H L
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA-------SIGLGAFDFAKGVHGQILK- 275
Query: 442 EHFTC----------MIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
TC ++ L + +A + NE+ DVV W ++
Sbjct: 276 ---TCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/666 (37%), Positives = 379/666 (56%), Gaps = 40/666 (6%)
Query: 17 LTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISA 75
+ TLR VH+ +I LG KL+ Y VA ARK+FDE+PER+++ N MI +
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 76 HVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL 135
+V++G + V+++G M V PD YTF + KA S G + GR+ HG A +GL
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
+FV + LV MY K + +A LV D + +DVV + +L+ GYAQ+ +ALEV REM
Sbjct: 175 -LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 196 DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE 255
++ + T+AS L + V++ T+ MY V+
Sbjct: 234 SVKISHDAGTMASLLPA-------------------------VSNTTTENVMY-----VK 263
Query: 256 DSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS 315
D +F ++ S V+W + ++N AV ++ M P+ +++S+L AC
Sbjct: 264 D---MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 316 SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNS 375
+ +G++IH + + N ALI++Y KCG ++KAR VF+ + D+VS +
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 376 MIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
MI AY +G G +A+ LF +++ GL P+ + F++ L AC++AGL+EEG F M +++
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440
Query: 436 NIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKI 494
I EH CM+DLLGR+ + +EA I +++ P+ +W LL ACR+H + ++
Sbjct: 441 KITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLA 500
Query: 495 MRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHT 554
K+ QLAP G ++LL+N+YA AG+W +V ++ ++ LKK+P S V+V+R +HT
Sbjct: 501 ADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHT 560
Query: 555 FMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIA 614
F+ GD SHP++ EI+ L L++K K LGY PD+ L D+ EE K + L HSEKLAI
Sbjct: 561 FLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIV 620
Query: 615 FALWKTC----GRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLC 670
FAL T IRI KNLR+CGDCH K ++ +T R+II RD+ RFH F+ G+C
Sbjct: 621 FALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVC 680
Query: 671 SCKDYW 676
SC DYW
Sbjct: 681 SCGDYW 686
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/659 (35%), Positives = 377/659 (57%), Gaps = 8/659 (1%)
Query: 21 RAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSH 79
R +H + G S LLG ++ Y K V +ARK+FD MPE+ + WN+MIS + +
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 80 GKSKQAVELYGNMLVEGVLP-DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVF 138
++++++ +++ E D T I A +EL +R G + H LA G D +
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD-Y 257
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR 198
V + + +Y+K K++ +F + D+V + A+I GY +G +L +F+E++
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 199 VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSV 258
+ TL S + G+L + IHG+ +KS S + T+L T+YS+ + +E +
Sbjct: 318 ARLRSSTLVSLVPVSGHL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
K+F++ S +W + + G QNG E A+S+FREM + SPNP T++ IL AC+
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
+G+ +H + E + ALI +Y KCG++ +AR +FD++T+ + V+ N+MI
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIE 438
Y +G G EAL +F + G+ P VTF+ +L AC++AGLV+EG ++F M + + E
Sbjct: 495 GYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Query: 439 LTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRK 497
+ +H+ CM+D+LGR+ + A I ++ P +W TLL ACRIH + +A + K
Sbjct: 555 PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEK 614
Query: 498 VLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMA 557
+ +L P + G H+LL+N++++ + Q ++ T + KL K+P + +++ H F +
Sbjct: 615 LFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTS 674
Query: 558 GDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFAL 617
GD SHP+ EI++ L +L K + GY P+T L D+ EE++ + HSE+LAIAF L
Sbjct: 675 GDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGL 734
Query: 618 WKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
T T IRI KNLRVC DCH+ K ++ +T R I+ RD+ RFHHFK G+CSC DYW
Sbjct: 735 IAT-EPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 233/490 (47%), Gaps = 8/490 (1%)
Query: 14 TKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSM 72
+ S++ L HA +I GF + L KL G++ AR +F + + +N +
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 73 ISAHVSHGKSKQAVELYGNMLVEGVL-PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLG 131
+ + ++ ++ ++ L P++ T++ A S R GR HG AVV G
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG 149
Query: 132 LEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVF 191
+ ++ + S +V MY KF ++ DA VFDR+ EKD +L+ +I+GY ++ + E+++VF
Sbjct: 150 CDS-ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 192 REMVDRR-VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSR 250
R++++ + + TL L + L + G IH K+G S T +++YS+
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 251 CSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSI 310
C ++ +F + V + + + G NG E+++S+F+E++ TL S+
Sbjct: 269 CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 311 LQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDL 370
+ + IH K + AL +Y K ++ AR +FD E L
Sbjct: 329 VPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 371 VSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF 430
S N+MI Y QNG +A+ LF+ ++K +PN VT IL AC G + G +
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 431 MKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEM 490
+++ + E + T +I + + EA L + +T + V W T+++ +HG+ +
Sbjct: 446 VRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQE 504
Query: 491 AEKIMRKVLQ 500
A I ++L
Sbjct: 505 ALNIFYEMLN 514
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/677 (36%), Positives = 375/677 (55%), Gaps = 11/677 (1%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISS--GFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
L+ S+ R VHA ++ + L + LI+ Y K AR + P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
++V+W S+IS +G A+ + M EGV+P+ +TF FKA + L L G++ H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLD 184
LAV G +LDVFV + DMY K DA +FD + E+++ + A I+ G
Sbjct: 132 ALAVKCG-RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 185 GEALEVFREMVDRRVK--PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
EA+E F E RR+ PN T + L +C + G +HG +++SG ++ V+
Sbjct: 191 REAIEAFIEF--RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
L+ Y +C + S +F ++ + V+W S V VQN +E A ++ + V
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ F +SS+L AC+ A E+G IHA K +E G+AL+++YGKCG ++ + F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRI--KKLGLAPNGVTFISILLACNNAGL 420
D + E +LV+ NS+I YA G AL LF+ + + G PN +TF+S+L AC+ AG
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLL 479
VE G ++F M++ + IE EH++C++D+LGR+ E A I ++ P + +W L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
NACR+HG+ ++ + +L P D G H+LL+N +A+AG+W + ++ ++ + +KK
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 540 SPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEK 599
SW+ V +VH F A D SH EI L +L + + GY PD + L DL EE+
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEE 608
Query: 600 KMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDS 659
K + + +HSEKLA+AF L + + IRI KNLR+CGDCHS+ KFV+ R+II RD+
Sbjct: 609 KAAEVSHHSEKLALAFGLL-SLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDN 667
Query: 660 KRFHHFKGGLCSCKDYW 676
RFH FK G+CSCKDYW
Sbjct: 668 NRFHRFKDGICSCKDYW 684
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPE 63
SS+++ CA L R++HAH + + + +G L+D Y KCG + ++ + FDEMPE
Sbjct: 314 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 373
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGV--LPDAYTFSAIFKAFSELGLVRYGR 121
+++VT NS+I + G+ A+ L+ M G P+ TF ++ A S G V G
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433
Query: 122 RA-HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV-LEKDVVLFTAL----- 174
+ + G+E S +VDM + + A+ ++ ++ + ++ AL
Sbjct: 434 KIFDSMRSTYGIEP-GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACR 492
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
+ G Q GL A +F+ +D + N L++T A+ G ++
Sbjct: 493 MHGKPQLGLLA-AENLFK--LDPKDSGNHVLLSNTFAAAGRWAEA 534
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/708 (35%), Positives = 383/708 (54%), Gaps = 41/708 (5%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEM 61
Y++++ A KS T R V + FS+ + L+ Y K G ++E F+++
Sbjct: 43 LYNNIVHAYALMKSSTYARRVFDRIPQPNLFSW----NNLLLAYSKAGLISEMESTFEKL 98
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE-GVLPDAYTFSAIFKAFSELGLVRYG 120
P+R VTWN +I + G AV+ Y M+ + T + K S G V G
Sbjct: 99 PDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLG 158
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFD------------------- 161
++ HG + LG E + V S L+ MYA + DA VF
Sbjct: 159 KQIHGQVIKLGFESY-LLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 162 -----------RVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
R +EKD V + A+I G AQ+GL EA+E FREM + +K ++Y S L
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
+CG LG G+ IH I+++ + + ++L+ MY +C + + VF+++ + V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAIT 330
+WT+ VVG Q GR E AV +F +M R + P+ +TL + AC++ + E G Q H
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 331 TKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEAL 390
G+ +L+ LYGKCG++D + +F+ + D VS +M+ AYAQ G E +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 391 QLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDL 450
QLF ++ + GL P+GVT ++ AC+ AGLVE+G + F M + + I + H++CMIDL
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDL 517
Query: 451 LGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTH 509
RS R EEA IN + PD + W TLL+ACR G +E+ + +++L P +
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 510 ILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIF 569
LL+++YAS GKW+ V +++ +R+ +KK P +SW+ ++H+F A D S P +I+
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIY 637
Query: 570 DMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFAL-WKTCGRTTAIR 628
L EL K GY PDT FV D+ E K+ L YHSE+LAIAF L + G+ IR
Sbjct: 638 AKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQ--PIR 695
Query: 629 IFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
+ KNLRVC DCH+ K ++ +TGR+I+ RD+ RFH FK G CSC D+W
Sbjct: 696 VGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 219/465 (47%), Gaps = 48/465 (10%)
Query: 81 KSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVA 140
+S+ ++GN++ P+ + ++ I A++ + Y RR V + ++F
Sbjct: 21 QSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARR-----VFDRIPQPNLFSW 75
Query: 141 SALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV-DRRV 199
+ L+ Y+K + + F+++ ++D V + LI GY+ SGL G A++ + M+ D
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 200 KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSR--------- 250
TL + L + G G+ IHG ++K G ES++ + LL MY+
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 251 ----------------------CSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVA 288
C M+ED++++F + S V+W + + GL QNG + A
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-VSWAAMIKGLAQNGLAKEA 254
Query: 289 VSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
+ FREM + + + S+L AC G+QIHA + + + G+ALI++
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 349 YGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTF 408
Y KC + A++VFD + + ++VS +M+ Y Q G EA+++F +++ G+ P+ T
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 409 ISILLACNNAGLVEEGCQLFAFMKNN---HNIELTREHFTCMIDLLGRSKRFEEAAMLIN 465
+ AC N +EEG Q + H + ++ ++ L G+ +++ L N
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNS----LVTLYGKCGDIDDSTRLFN 430
Query: 466 EVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ--LAPGDGGT 508
E+ D V W +++A G ++ K++Q L P DG T
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP-DGVT 474
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/709 (34%), Positives = 398/709 (56%), Gaps = 43/709 (6%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSG-FSYCLLGHKL--IDGYIKCGSVAEARKLFDEMP 62
SLI +C SL L+ H H+I +G FS KL + S+ ARK+FDE+P
Sbjct: 35 SLIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLPDAYTFSAIFKAFSELGLVRYGR 121
+ + WN++I A+ S ++ + +M+ E P+ YTF + KA +E+ + G+
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
HG+AV + DVFVA++L+ Y + A VF + EKDVV + ++I G+ Q
Sbjct: 152 SLHGMAVKSAVGS-DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
G +ALE+F++M VK + T+ L++C + + G+ + +I ++ + +
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLV--------------------- 280
++L MY++C +ED+ ++F+ + +VTWT+ + G
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 281 ----------QNGREEVAVSVFREM-IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAI 329
QNG+ A+ VF E+ ++ ++ N TL S L AC+ E+G IH+
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA 389
K G+ N +ALI++Y KCG+++K+R VF+ + + D+ ++MI A +G G EA
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 390 LQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMID 449
+ +F ++++ + PNGVTF ++ AC++ GLV+E LF M++N+ I +H+ C++D
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 450 LLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGT 508
+LGRS E+A I + P +W LL AC+IH + +AE ++L+L P + G
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 509 HILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEI 568
H+LL+N+YA GKW V E++ +R LKK P S +++D +H F++GD +HP + ++
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Query: 569 FDMLHELIEKAKTLGYSPDTRFVLQDLHEEK-KMSSLYYHSEKLAIAFALWKTCGRTTAI 627
+ LHE++EK K+ GY P+ VLQ + EE+ K SL HSEKLAI + L T I
Sbjct: 631 YGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIST-EAPKVI 689
Query: 628 RIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
R+ KNLRVCGDCHS K ++ L R+II RD RFHHF+ G CSC D+W
Sbjct: 690 RVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/678 (35%), Positives = 392/678 (57%), Gaps = 15/678 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ S++ C +++ +H + GF + + LI Y + +V AR LFDEMP
Sbjct: 156 FPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP 212
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
R + +WN+MIS + G +K+A+ L + D+ T ++ A +E G G
Sbjct: 213 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVT 268
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H ++ GLE ++FV++ L+D+YA+F ++RD VFDR+ +D++ + ++I Y +
Sbjct: 269 IHSYSIKHGLES-ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG--LESFVAS 240
A+ +F+EM R++P+ TL S + LGD + + GF ++ G LE +
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED-ITI 386
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR-CS 299
+++ MY++ +V+ + VFN L ++W + + G QNG A+ ++ M
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
++ N T S+L ACS G ++H K G+ + +L ++YGKCG ++ A
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 506
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
S+F + ++ V N++I + +G G +A+ LFK + G+ P+ +TF+++L AC+++G
Sbjct: 507 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTL 478
LV+EG F M+ ++ I + +H+ CM+D+ GR+ + E A I ++ PD +W L
Sbjct: 567 LVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGAL 626
Query: 479 LNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLK 538
L+ACR+HG +++ + + ++ P G H+LL+N+YASAGKW V E+++ L+
Sbjct: 627 LSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLR 686
Query: 539 KSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEE 598
K+P S ++VD +V F G+ +HP E++ L L K K +GY PD RFVLQD+ ++
Sbjct: 687 KTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDD 746
Query: 599 KKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARD 658
+K L HSE+LAIAFAL T +TT IRIFKNLRVCGDCHS KF++ +T R+II RD
Sbjct: 747 EKEHILMSHSERLAIAFALIATPAKTT-IRIFKNLRVCGDCHSVTKFISKITEREIIVRD 805
Query: 659 SKRFHHFKGGLCSCKDYW 676
S RFHHFK G+CSC DYW
Sbjct: 806 SNRFHHFKNGVCSCGDYW 823
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 261/513 (50%), Gaps = 21/513 (4%)
Query: 13 HTKSLTTLRAVHAH-VISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNS 71
+ +L + + +HA V+S + KL++ Y G+VA AR FD + R + WN
Sbjct: 63 YCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNL 122
Query: 72 MISAHVSHGKSKQAVELYG-NMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVL 130
MIS + G S + + + ML G+ PD TF ++ KA V G + H LA+
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIHCLALKF 179
Query: 131 GLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEV 190
G + DV+VA++L+ +Y+++ + +A ++FD + +D+ + A+I+GY QSG EAL +
Sbjct: 180 GF-MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 191 ---FREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTM 247
R M + T+ S L++C GD G IH + +K GLES + L+ +
Sbjct: 239 SNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 248 YSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTL 307
Y+ + D KVF+++ ++W S + N + A+S+F+EM + P+ TL
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 308 SSILQACSSRAMREVGEQIHAITTKLG-MEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
S+ S + T + G + G A++ +Y K G VD AR+VF+ L
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 367 ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISILLACNNAGLVEEGC 425
D++S N++I YAQNGF EA++++ +++ G +A N T++S+L AC+ AG + +G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 426 QLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIH 485
+L + N + L T + D+ G+ R E+A L ++ + V W TL+ H
Sbjct: 472 KLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 530
Query: 486 GEIEMAEKIMRKVLQLAPGDGGTHILLTNLYAS 518
G E A + +++L G HI L ++
Sbjct: 531 GHGEKAVMLFKEMLD--EGVKPDHITFVTLLSA 561
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/682 (33%), Positives = 390/682 (57%), Gaps = 15/682 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF---SYCLLGHKLIDGYIKCGSVAEARKLFDE 60
+++L+ C + VHA + GF + + + L+ Y + + A LF+E
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+PE+ VT+N++I+ + G +++ L+ M G P +TFS + KA L G
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
++ H L+V G D V + ++D Y+K D++ + ++FD + E D V + +I+ Y+Q
Sbjct: 270 QQLHALSVTTGFS-RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 181 SGLDGEALEVFREM----VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES 236
+ +L FREM DRR + A+ L+ NL G+ +H + + +S
Sbjct: 329 ADQYEASLHFFREMQCMGFDRR----NFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI 296
+ SL+ MY++C M E++ +F L + V+WT+ + G VQ G + +F +M
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 297 RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVD 356
++ + T +++L+A +S A +G+Q+HA + G N +G+ L+++Y KCG++
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 357 KARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN 416
A VF+ + + + VS N++I A+A NG G A+ F ++ + GL P+ V+ + +L AC+
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 417 NAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLW 475
+ G VE+G + F M + I ++H+ CM+DLLGR+ RF EA L++E+ PD ++W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQLAP-GDGGTHILLTNLYASAGKWNQVIEMKTTIRD 534
++LNACRIH +AE+ K+ + D ++ ++N+YA+AG+W +V ++K +R+
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Query: 535 LKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQD 594
+KK PA SWV+V+ ++H F + D +HP EI ++EL + + GY PDT V+QD
Sbjct: 685 RGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQD 744
Query: 595 LHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDI 654
+ E+ K+ SL YHSE+LA+AFAL T I + KNLR C DCH+ IK ++ + R+I
Sbjct: 745 VDEQMKIESLKYHSERLAVAFALIST-PEGCPIVVMKNLRACRDCHAAIKLISKIVKREI 803
Query: 655 IARDSKRFHHFKGGLCSCKDYW 676
RD+ RFHHF G+CSC DYW
Sbjct: 804 TVRDTSRFHHFSEGVCSCGDYW 825
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 222/463 (47%), Gaps = 4/463 (0%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG--VL 98
+I G++K G V+ AR LFD MP+R +VTW ++ + + +A +L+ M L
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVF-VASALVDMYAKFDKMRDAH 157
PD TF+ + ++ + H AV LG + V++ L+ Y + ++ A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 158 LVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
++F+ + EKD V F LI GY + GL E++ +F +M +P+++T + L + L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVV 277
D GQ +H V +G + +L YS+ V ++ +F+++ V++ +
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 278 GLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEG 337
Q + E ++ FREM F +++L ++ + ++G Q+H +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 338 NKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK 397
G +L+++Y KC ++A +F L + VS ++I Y Q G L+LF +++
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 398 KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRF 457
L + TF ++L A + + G QL AF+ + N+E + ++D+ +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSI 503
Query: 458 EEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
++A + E+ + + V W L++A +G+ E A K+++
Sbjct: 504 KDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 172/373 (46%), Gaps = 11/373 (2%)
Query: 116 LVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALI 175
L+R G+ + V + + + ++ + K + A +FD + ++ VV +T L+
Sbjct: 58 LLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILM 117
Query: 176 AGYAQSGLDGEALEVFREMVDRR--VKPNEYTLASTLASCGN-LGDSVNGQLIHGFIVKS 232
YA++ EA ++FR+M P+ T + L C + + + GQ +H F VK
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQ-VHAFAVKL 176
Query: 233 GLES--FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVS 290
G ++ F+ LL Y ++ + +F ++ VT+ + + G ++G ++
Sbjct: 177 GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIH 236
Query: 291 VFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYG 350
+F +M + P+ FT S +L+A +G+Q+HA++ G + G +++ Y
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYS 296
Query: 351 KCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFIS 410
K V + R +FD + ELD VS N +I +Y+Q +L F+ ++ +G F +
Sbjct: 297 KHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFAT 356
Query: 411 ILLACNNAGLVEEGCQLF--AFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT 468
+L N ++ G QL A + +I ++D+ + + FEEA ++ +
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVG---NSLVDMYAKCEMFEEAELIFKSLP 413
Query: 469 NPDVVLWRTLLNA 481
V W L++
Sbjct: 414 QRTTVSWTALISG 426
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/682 (35%), Positives = 384/682 (56%), Gaps = 23/682 (3%)
Query: 1 MNFYSSLITQCAH--TKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLF 58
+ F + + C H ++ + R V V S S L K+I GY + + +A LF
Sbjct: 33 VEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVS---LYTKMITGYTRSNRLVDALNLF 89
Query: 59 DEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
DEMP R +V+WNSMIS V G AV+L+ M V+ +++A+ G R
Sbjct: 90 DEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV----SWTAMVN-----GCFR 140
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G+ + + V D +++V Y +F K+ DA +F ++ K+V+ +T +I G
Sbjct: 141 SGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGL 200
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL--ES 236
Q+ GEAL++F+ M+ +K + +C N G +HG I+K G E
Sbjct: 201 DQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEE 260
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI 296
+V++ SL+T Y+ C + DS KVF++ + WT+ + G N + E A+S+F M+
Sbjct: 261 YVSA--SLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGML 318
Query: 297 RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVD 356
R S+ PN T +S L +CS+ + G+++H + KLG+E + G +L+ +Y GNV+
Sbjct: 319 RNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVN 378
Query: 357 KARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN 416
A SVF + + +VS NS+I AQ+G G A +F ++ +L P+ +TF +L AC+
Sbjct: 379 DAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACS 438
Query: 417 NAGLVEEGCQLFAFMKNNHN-IELTREHFTCMIDLLGRSKRFEEAAMLINE-VTNPDVVL 474
+ G +E+G +LF +M + N I+ +H+TCM+D+LGR + +EA LI V P+ ++
Sbjct: 439 HCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMV 498
Query: 475 WRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRD 534
W LL+ACR+H +++ EK + L ++LL+N+YASAG+W+ V +++ ++
Sbjct: 499 WLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKK 558
Query: 535 LKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQD 594
+ K P SWV + + H F +GD P I++ L L EK K LGY+PD R L D
Sbjct: 559 NGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHD 616
Query: 595 LHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDI 654
+ +E+K L+YHSE+LAIAF L T +A+ + KNLRVC DCH+ IK ++ + GR+I
Sbjct: 617 VEDEQKEEMLWYHSERLAIAFGLINTV-EGSAVTVMKNLRVCEDCHTVIKLISGVVGREI 675
Query: 655 IARDSKRFHHFKGGLCSCKDYW 676
+ RD RFHHFK G CSC DYW
Sbjct: 676 VLRDPIRFHHFKNGTCSCGDYW 697
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/684 (35%), Positives = 390/684 (57%), Gaps = 20/684 (2%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGFSYC-LLGHKLIDGYIKCGSVAEARKLFDE 60
+FY+SLI H L+ +HA ++ G + L KLI G + AR++FD+
Sbjct: 22 SFYASLIDSATHK---AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+P I WN++I + + + A+ +Y NM + V PD++TF + KA S L ++ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFD--RVLEKDVVLFTALIAGY 178
R H LG + DVFV + L+ +YAK ++ A VF+ + E+ +V +TA+++ Y
Sbjct: 139 RFVHAQVFRLGFDA-DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
AQ+G EALE+F +M VKP+ L S L + L D G+ IH +VK GLE
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
SL TMY++C V + +F+++ + + W + + G +NG A+ +F EMI
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 299 SVSPNPFTLSSILQACSSRAMREVG--EQIHAITTKLGMEGNKD---AGAALINLYGKCG 353
V P+ +++S + AC+ +VG EQ ++ +G +D +ALI+++ KCG
Sbjct: 318 DVRPDTISITSAISACA-----QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 354 NVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
+V+ AR VFD + D+V ++MI Y +G EA+ L++ +++ G+ PN VTF+ +L+
Sbjct: 373 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 432
Query: 414 ACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDV 472
ACN++G+V EG F M +H I ++H+ C+IDLLGR+ ++A +I + P V
Sbjct: 433 ACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 491
Query: 473 VLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTI 532
+W LL+AC+ H +E+ E +++ + P + G ++ L+NLYA+A W++V E++ +
Sbjct: 492 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 551
Query: 533 RDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVL 592
++ L K SWV+V + F GD SHPR EI + + + K G+ + L
Sbjct: 552 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 611
Query: 593 QDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGR 652
DL++E+ +L HSE++AIA+ L T + T +RI KNLR C +CH+ K ++ L R
Sbjct: 612 HDLNDEEAEETLCSHSERIAIAYGLIST-PQGTPLRITKNLRACVNCHAATKLISKLVDR 670
Query: 653 DIIARDSKRFHHFKGGLCSCKDYW 676
+I+ RD+ RFHHFK G+CSC DYW
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/664 (34%), Positives = 394/664 (59%), Gaps = 12/664 (1%)
Query: 23 VHAHVISSGFSYCLL-GHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
VH +++ SG L+ + LID Y KC A K+FD MPER++V+W++++S HV +G
Sbjct: 28 VHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGD 87
Query: 82 SKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVAS 141
K ++ L+ M +G+ P+ +TFS KA L + G + HG + +G E++ V V +
Sbjct: 88 LKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM-VEVGN 146
Query: 142 ALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVK- 200
+LVDMY+K ++ +A VF R++++ ++ + A+IAG+ +G +AL+ F M + +K
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 201 -PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL--ESFVASQTSLLTMYSRCSMVEDS 257
P+E+TL S L +C + G G+ IHGF+V+SG S SL+ +Y +C + +
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 258 VKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSR 317
K F+Q+ + ++W+S ++G Q G A+ +F+ + + + F LSSI+ +
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 318 AMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMI 377
A+ G+Q+ A+ KL +++++Y KCG VD+A F + D++S +I
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Query: 378 YAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
Y ++G G +++++F + + + P+ V ++++L AC+++G+++EG +LF+ + H I
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Query: 438 ELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMR 496
+ EH+ C++DLLGR+ R +EA LI+ + P+V +W+TLL+ CR+HG+IE+ +++ +
Sbjct: 447 KPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGK 506
Query: 497 KVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFM 556
+L++ + +++++NLY AG WN+ + LKK SWV+++REVH F
Sbjct: 507 ILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFR 566
Query: 557 AGDMSHPRAHEIFDMLHELIEKAK-TLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAF 615
+G+ SHP I + L E + + LGY + L D+ +E K +L HSEKLAI
Sbjct: 567 SGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGL 626
Query: 616 ALWKTCG---RTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSC 672
AL T G + IR+FKNLRVC DCH +IK ++ +T + RD+ RFH F+ G CSC
Sbjct: 627 AL-ATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSC 685
Query: 673 KDYW 676
DYW
Sbjct: 686 GDYW 689
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 209/400 (52%), Gaps = 8/400 (2%)
Query: 106 AIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE 165
+I + + GL G + H + G L++ ++ L+DMY K + A+ VFD + E
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSG-SGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 166 KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLI 225
++VV ++AL++G+ +G +L +F EM + + PNE+T ++ L +CG L G I
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 226 HGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGRE 285
HGF +K G E V SL+ MYS+C + ++ KVF ++ S ++W + + G V G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 286 EVAVSVFREMIRCSVS--PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDA-- 341
A+ F M ++ P+ FTL+S+L+ACSS M G+QIH + G A
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 342 GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGL 401
+L++LY KCG + AR FD + E ++S +S+I YAQ G EA+ LFKR+++L
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 402 APNGVTFISILLACNNAGLVEEGCQLFAF-MKNNHNIELTREHFTCMIDLLGRSKRFEEA 460
+ SI+ + L+ +G Q+ A +K +E + ++D+ + +EA
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEA 367
Query: 461 AMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
E+ DV+ W ++ HG + + +I ++L+
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 407
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 155/313 (49%), Gaps = 20/313 (6%)
Query: 201 PNE-YTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVK 259
PN+ L S L C G S G +H +++KSG + + L+ MY +C + K
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 260 VFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAM 319
VF+ + + V+W++ + G V NG + ++S+F EM R + PN FT S+ L+AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 320 REVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYA 379
E G QIH K+G E + G +L+++Y KCG +++A VF + + L+S N+MI
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 380 YAQNGFGYEALQLFKRIKKLGLA--PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
+ G+G +AL F +++ + P+ T S+L AC++ G++ G Q+ F
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF------- 235
Query: 438 ELTREHFTC---------MIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEI 488
L R F C ++DL + A +++ ++ W +L+ GE
Sbjct: 236 -LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 489 EMAEKIMRKVLQL 501
A + +++ +L
Sbjct: 295 VEAMGLFKRLQEL 307
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 167/352 (47%), Gaps = 38/352 (10%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGF---SYCLLGHKLIDGYIKCGSVAEARKLFDEM 61
+SL+ C+ T + + +H ++ SGF S + L+D Y+KCG + ARK FD++
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
E+ +++W+S+I + G+ +A+ L+ + D++ S+I F++ L+R G+
Sbjct: 274 KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 333
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ LAV L L+ V +++VDMY K + +A F + KDV+ +T +I GY +
Sbjct: 334 QMQALAVKLP-SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 392
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
GL +++ +F EM+ ++P+E + L++C H ++K G E F
Sbjct: 393 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS-----------HSGMIKEGEELF---- 437
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
+ LL + VE V + L A GR + A + M +
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRA---------------GRLKEAKHLIDTM---PIK 479
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
PN ++L C E+G+++ I ++ + N + NLYG+ G
Sbjct: 480 PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK-NPANYVMMSNLYGQAG 530
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/704 (34%), Positives = 398/704 (56%), Gaps = 37/704 (5%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
++ CA +++ +H ++ G++ L + + L+ Y +CG + ARK+FDEM ER++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLV-EGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
V+W SMI + +K AV+L+ M+ E V P++ T + A ++L + G + +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG 185
G+EV D+ V SALVDMY K + + A +FD ++ L A+ + Y + GL
Sbjct: 261 FIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
EAL VF M+D V+P+ ++ S ++SC L + + G+ HG+++++G ES+ +L+
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM---------- 295
MY +C + + ++F++++ + VTW S V G V+NG + A F M
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 296 ----------------IRCS------VSPNPFTLSSILQACSSRAMREVGEQIHAITTKL 333
+ CS V+ + T+ SI AC ++ + I+ K
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 334 GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLF 393
G++ + G L++++ +CG+ + A S+F+ LT D+ + + I A A G A++LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 394 KRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
+ + GL P+GV F+ L AC++ GLV++G ++F M H + H+ CM+DLLGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 454 SKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILL 512
+ EEA LI ++ P+ V+W +LL ACR+ G +EMA K+ LAP G+++LL
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 513 TNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
+N+YASAG+WN + +++ ++++ L+K P S + + + H F +GD SHP I ML
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 573 HELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKN 632
E+ ++A LG+ PD VL D+ E++K+ L HSEKLA+A+ L + + T IRI KN
Sbjct: 740 DEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISS-NKGTTIRIVKN 798
Query: 633 LRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
LRVC DCHS+ KF + + R+II RD+ RFH+ + G CSC D+W
Sbjct: 799 LRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 218/442 (49%), Gaps = 39/442 (8%)
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
+NS+I + S G +A+ L+ M+ G+ PD YTF A ++ G + HGL V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEAL 188
+G D+FV ++LV YA+ ++ A VFD + E++VV +T++I GYA+ +A+
Sbjct: 162 KMGY-AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 189 EVFREMV-DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTM 247
++F MV D V PN T+ +++C L D G+ ++ FI SG+E ++L+ M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 248 YSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTL 307
Y +C+ ++ + ++F++ ++ + V+ G A+ VF M+ V P+ ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 308 SSILQACSSRAMREV--GEQIHAITTKLGMEGNKDAGAALINLYGKC------------- 352
S + +CS +R + G+ H + G E + ALI++Y KC
Sbjct: 341 LSAISSCSQ--LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 353 ------------------GNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFK 394
G VD A F+ + E ++VS N++I Q EA+++F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 395 RIK-KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
++ + G+ +GVT +SI AC + G ++ ++ +++ N I+L T ++D+ R
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSR 517
Query: 454 SKRFEEAAMLINEVTNPDVVLW 475
E A + N +TN DV W
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAW 539
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 168/323 (52%), Gaps = 2/323 (0%)
Query: 170 LFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFI 229
++ +LI GYA SGL EA+ +F M++ + P++YT L++C NG IHG I
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 230 VKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAV 289
VK G + Q SL+ Y+ C ++ + KVF++++ + V+WTS + G + + AV
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 290 SVFREMIRC-SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
+F M+R V+PN T+ ++ AC+ E GE+++A G+E N +AL+++
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 349 YGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTF 408
Y KC +D A+ +FD +L N+M Y + G EAL +F + G+ P+ ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 409 ISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT 468
+S + +C+ + G ++ N E +ID+ + R + A + + ++
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 469 NPDVVLWRTLLNACRIHGEIEMA 491
N VV W +++ +GE++ A
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAA 422
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 209/450 (46%), Gaps = 69/450 (15%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYC-LLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
+I+ CA + L T V+A + +SG L+ L+D Y+KC ++ A++LFDE +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
+ N+M S +V G +++A+ ++ M+ GV PD + + + S+L + +G+ HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG--- 182
+ G E D + +AL+DMY K + A +FDR+ K VV + +++AGY ++G
Sbjct: 362 YVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420
Query: 183 ----------------------------LDGEALEVFREMVDRR-VKPNEYTLASTLASC 213
L EA+EVF M + V + T+ S ++C
Sbjct: 421 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 480
Query: 214 GNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWT 273
G+LG + I+ +I K+G++ V T+L+ M+SRC E ++ +FN L WT
Sbjct: 481 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 540
Query: 274 SFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKL 333
+ + + G E A+ +F +MI + P+ L ACS + + G++I KL
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 334 -GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQL 392
G+ +++L G+ G ++ EA+QL
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLE-------------------------------EAVQL 629
Query: 393 FKRIKKLGLAPNGVTFISILLACNNAGLVE 422
I+ + + PN V + S+L AC G VE
Sbjct: 630 ---IEDMPMEPNDVIWNSLLAACRVQGNVE 656
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 136/264 (51%), Gaps = 9/264 (3%)
Query: 208 STLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED---SVKVF-NQ 263
S+L +C + + ++ H + K GL++ V++ T L+ E + +VF N
Sbjct: 37 SSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 264 LAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG 323
+Y + + S + G +G A+ +F M+ +SP+ +T L AC+ + G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQN 383
QIH + K+G + +L++ Y +CG +D AR VFD ++E ++VS SMI YA+
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 384 GFGYEALQLFKR-IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTRE 442
F +A+ LF R ++ + PN VT + ++ AC +E G +++AF++N+ IE+
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDL 272
Query: 443 HFTCMIDLLGRSKRFEEAAMLINE 466
+ ++D+ + + A L +E
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDE 296
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/664 (36%), Positives = 389/664 (58%), Gaps = 9/664 (1%)
Query: 21 RAVHAHVISSGFSYCL--LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVS 78
R VH HVI++G + +G+ L++ Y KCGS+A+AR++F M ++ V+WNSMI+
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 79 HGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVF 138
+G +AVE Y +M +LP ++T + + + L + G++ HG ++ LG++ L+V
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID-LNVS 451
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLD-GEALEVFREMVDR 197
V++AL+ +YA+ + + +F + E D V + ++I A+S EA+ F
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 198 RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDS 257
K N T +S L++ +L G+ IHG +K+ + ++ +L+ Y +C ++
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571
Query: 258 VKVFNQLA-YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSS 316
K+F+++A +VTW S + G + N A+ + M++ + F +++L A +S
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 317 RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSM 376
A E G ++HA + + +E + G+AL+++Y KCG +D A F+ + + S NSM
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691
Query: 377 IYAYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
I YA++G G EAL+LF+ +K G P+ VTF+ +L AC++AGL+EEG + F M +++
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 751
Query: 436 NIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNAC-RIHG-EIEMAE 492
+ EHF+CM D+LGR+ ++ I ++ P+V++WRT+L AC R +G + E+ +
Sbjct: 752 GLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGK 811
Query: 493 KIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREV 552
K + QL P + ++LL N+YA+ G+W +++ + ++D +KK SWV + V
Sbjct: 812 KAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGV 871
Query: 553 HTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLA 612
H F+AGD SHP A I+ L EL K + GY P T F L DL +E K L YHSEKLA
Sbjct: 872 HMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLA 931
Query: 613 IAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSC 672
+AF L T IRI KNLRVCGDCHS K+++ + GR II RDS RFHHF+ G CSC
Sbjct: 932 VAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSC 991
Query: 673 KDYW 676
D+W
Sbjct: 992 SDFW 995
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 262/536 (48%), Gaps = 27/536 (5%)
Query: 3 FYSSLITQCAHTKS-LTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDE 60
F S + T C+ T+ + L + + SG + +G L+ + K GS++ ARK+F++
Sbjct: 209 FGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ 268
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNM--LVEGVLPDAYTFSAIFKAFSELGL-- 116
M R+ VT N ++ V ++A +L+ +M +++ V P++Y + +F E L
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID-VSPESYVI--LLSSFPEYSLAE 325
Query: 117 ---VRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTA 173
++ GR HG + GL V + + LV+MYAK + DA VF + +KD V + +
Sbjct: 326 EVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNS 385
Query: 174 LIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
+I G Q+G EA+E ++ M + P +TL S+L+SC +L + GQ IHG +K G
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGRE-EVAVSVF 292
++ V+ +L+T+Y+ + + K+F+ + V+W S + L ++ R AV F
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 293 REMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKC 352
R N T SS+L A SS + E+G+QIH + K + ALI YGKC
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKC 565
Query: 353 GNVDKARSVFDVLTE-LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISI 411
G +D +F + E D V+ NSMI Y N +AL L + + G + + ++
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 412 LLACNNAGLVEEG-----CQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINE 466
L A + +E G C + A ++++ + + ++D+ + R + A N
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVG------SALVDMYSKCGRLDYALRFFNT 679
Query: 467 VTNPDVVLWRTLLNACRIHGEIEMAEKIMR--KVLQLAPGDGGTHILLTNLYASAG 520
+ + W ++++ HG+ E A K+ K+ P D T + + + + AG
Sbjct: 680 MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 227/458 (49%), Gaps = 18/458 (3%)
Query: 37 LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L + LI+ Y++ G ARK+FDEMP R+ V+W ++S + +G+ K+A+ +M+ EG
Sbjct: 38 LCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEG 97
Query: 97 VLPDAYTFSAIFKAFSELGLVR--YGRRAHGLAVVLGLEVLDVFVASALVDMYAK-FDKM 153
+ + Y F ++ +A E+G V +GR+ HGL L V D V++ L+ MY K +
Sbjct: 98 IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV-DAVVSNVLISMYWKCIGSV 156
Query: 154 RDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASC 213
A F + K+ V + ++I+ Y+Q+G A +F M +P EYT S + +
Sbjct: 157 GYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTA 216
Query: 214 GNLGDSVNGQL--IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT 271
+L + L I I KSGL + + + L++ +++ + + KVFNQ+ + VT
Sbjct: 217 CSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVT 276
Query: 272 WTSFVVGLVQNGREEVAVSVFREMIR-CSVSPNPFTL-------SSILQACSSRAMREVG 323
+VGLV+ E A +F +M VSP + + S+ + + REV
Sbjct: 277 LNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV- 335
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQN 383
H ITT L ++ G L+N+Y KCG++ AR VF +T+ D VS NSMI QN
Sbjct: 336 -HGHVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 384 GFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREH 443
G EA++ +K +++ + P T IS L +C + + G Q+ I+L
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG-ESLKLGIDLNVSV 452
Query: 444 FTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
++ L + E + + + D V W +++ A
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 186/405 (45%), Gaps = 21/405 (5%)
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
DV++ + L++ Y + A VFD + ++ V + +++GY+++G EAL R+MV
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 196 DRRVKPNEYTLASTLASCGNLGDS--VNGQLIHGFIVKSGLESFVASQTSLLTMYSRC-S 252
+ N+Y S L +C +G + G+ IHG + K L++MY +C
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 253 MVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQ 312
V ++ F + + V+W S + Q G + A +F M P +T S++
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 313 ACSSRAMREVG--EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDL 370
S +V EQI K G+ + G+ L++ + K G++ AR VF+ + +
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 371 VSVNSMIYAYAQNGFGYEALQLFKRIKKL-GLAPNGVTFISILLACNNAGLVEE-----G 424
V++N ++ + +G EA +LF + + ++P +++ +L + L EE G
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKG 332
Query: 425 CQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRI 484
++ + ++ ++++ + +A + +T+ D V W +++
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 485 HG-EIEMAE--KIMRKVLQLAPGDGGTHILLTNLYASAG-KWNQV 525
+G IE E K MR+ + P G+ L+++L + A KW ++
Sbjct: 393 NGCFIEAVERYKSMRR-HDILP---GSFTLISSLSSCASLKWAKL 433
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 6/213 (2%)
Query: 208 STLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA 267
S + SC +G + H + K+ L+ V +L+ Y + KVF+++
Sbjct: 8 SFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 268 SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREV--GEQ 325
+ V+W V G +NG + A+ R+M++ + N + S+L+AC + G Q
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKC-GNVDKARSVFDVLTELDLVSVNSMIYAYAQNG 384
IH + KL + LI++Y KC G+V A F + + VS NS+I Y+Q G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 385 FGYEALQLFKRIKKLGLAPNGVTFISIL-LACN 416
A ++F ++ G P TF S++ AC+
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/725 (31%), Positives = 385/725 (53%), Gaps = 74/725 (10%)
Query: 24 HAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKS 82
HA ++ SG + KLI Y +A + +P+ I +++S+I A
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 83 KQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASA 142
Q++ ++ M G++PD++ +FK +EL + G++ H ++ V GL+ +D FV +
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD-MDAFVQGS 156
Query: 143 LVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVK-- 200
+ MY + +M DA VFDR+ +KDVV +AL+ YA+ G E + + EM ++
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 201 ---------------------------------PNEYTLASTLASCGNLGDSVNGQLIHG 227
P++ T++S L S G+ G+LIHG
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 228 FIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL---------AYASH--------- 269
+++K GL ++++ MY + V + +FNQ AY +
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 270 -----------------VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQ 312
V+WTS + G QNG++ A+ +FREM V PN T+ S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 313 ACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVS 372
AC + A G H ++ + N G+ALI++Y KCG ++ ++ VF+++ +LV
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 373 VNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMK 432
NS++ ++ +G E + +F+ + + L P+ ++F S+L AC GL +EG + F M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 433 NNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMA 491
+ I+ EH++CM++LLGR+ + +EA LI E+ PD +W LLN+CR+ +++A
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 492 EKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDRE 551
E K+ L P + GT++LL+N+YA+ G W +V ++ + L LKK+P SW+ V
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNR 636
Query: 552 VHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKL 611
V+T +AGD SHP+ +I + + E+ ++ + G+ P+ F L D+ E+++ L+ HSEKL
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKL 696
Query: 612 AIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCS 671
A+ F L T T +++ KNLR+CGDCH+ IKF++ GR+I RD+ RFHHFK G+CS
Sbjct: 697 AVVFGLLNT-PDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 672 CKDYW 676
C D+W
Sbjct: 756 CGDFW 760
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/703 (33%), Positives = 397/703 (56%), Gaps = 37/703 (5%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
++ CA +++ +H ++ G++ L + + L+ Y +CG + ARK+FDEM ER++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLV-EGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
V+W SMI + +K AV+L+ M+ E V P++ T + A ++L + G + +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG 185
G+EV D+ V SALVDMY K + + A +FD ++ L A+ + Y + GL
Sbjct: 261 FIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
EAL VF M+D V+P+ ++ S ++SC L + + G+ HG+++++G ES+ +L+
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM---------- 295
MY +C + + ++F++++ + VTW S V G V+NG + A F M
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 296 ----------------IRCS------VSPNPFTLSSILQACSSRAMREVGEQIHAITTKL 333
+ CS V+ + T+ SI AC ++ + I+ K
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 334 GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLF 393
G++ + G L++++ +CG+ + A S+F+ LT D+ + + I A A G A++LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 394 KRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
+ + GL P+GV F+ L AC++ GLV++G ++F M H + H+ CM+DLLGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 454 SKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILL 512
+ EEA LI ++ P+ V+W +LL ACR+ G +EMA K+ LAP G+++LL
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 513 TNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
+N+YASAG+WN + +++ ++++ L+K P S + + + H F +GD SHP I ML
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 573 HELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKN 632
E+ ++A LG+ PD VL D+ E++K+ L HSEKLA+A+ L + + T IRI KN
Sbjct: 740 DEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISS-NKGTTIRIVKN 798
Query: 633 LRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDY 675
LRVC DCHS+ KF + + R+II RD+ RFH+ + G CSC D+
Sbjct: 799 LRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 218/442 (49%), Gaps = 39/442 (8%)
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
+NS+I + S G +A+ L+ M+ G+ PD YTF A ++ G + HGL V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEAL 188
+G D+FV ++LV YA+ ++ A VFD + E++VV +T++I GYA+ +A+
Sbjct: 162 KMGY-AKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 189 EVFREMV-DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTM 247
++F MV D V PN T+ +++C L D G+ ++ FI SG+E ++L+ M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 248 YSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTL 307
Y +C+ ++ + ++F++ ++ + V+ G A+ VF M+ V P+ ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 308 SSILQACSSRAMREV--GEQIHAITTKLGMEGNKDAGAALINLYGKC------------- 352
S + +CS +R + G+ H + G E + ALI++Y KC
Sbjct: 341 LSAISSCSQ--LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 353 ------------------GNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFK 394
G VD A F+ + E ++VS N++I Q EA+++F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 395 RIK-KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
++ + G+ +GVT +SI AC + G ++ ++ +++ N I+L T ++D+ R
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSR 517
Query: 454 SKRFEEAAMLINEVTNPDVVLW 475
E A + N +TN DV W
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAW 539
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 168/323 (52%), Gaps = 2/323 (0%)
Query: 170 LFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFI 229
++ +LI GYA SGL EA+ +F M++ + P++YT L++C NG IHG I
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 230 VKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAV 289
VK G + Q SL+ Y+ C ++ + KVF++++ + V+WTS + G + + AV
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 290 SVFREMIRC-SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
+F M+R V+PN T+ ++ AC+ E GE+++A G+E N +AL+++
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 349 YGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTF 408
Y KC +D A+ +FD +L N+M Y + G EAL +F + G+ P+ ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 409 ISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT 468
+S + +C+ + G ++ N E +ID+ + R + A + + ++
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 469 NPDVVLWRTLLNACRIHGEIEMA 491
N VV W +++ +GE++ A
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAA 422
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 209/450 (46%), Gaps = 69/450 (15%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYC-LLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
+I+ CA + L T V+A + +SG L+ L+D Y+KC ++ A++LFDE +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
+ N+M S +V G +++A+ ++ M+ GV PD + + + S+L + +G+ HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG--- 182
+ G E D + +AL+DMY K + A +FDR+ K VV + +++AGY ++G
Sbjct: 362 YVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420
Query: 183 ----------------------------LDGEALEVFREMVDRR-VKPNEYTLASTLASC 213
L EA+EVF M + V + T+ S ++C
Sbjct: 421 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 480
Query: 214 GNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWT 273
G+LG + I+ +I K+G++ V T+L+ M+SRC E ++ +FN L WT
Sbjct: 481 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 540
Query: 274 SFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKL 333
+ + + G E A+ +F +MI + P+ L ACS + + G++I KL
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 334 -GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQL 392
G+ +++L G+ G ++ EA+QL
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLE-------------------------------EAVQL 629
Query: 393 FKRIKKLGLAPNGVTFISILLACNNAGLVE 422
I+ + + PN V + S+L AC G VE
Sbjct: 630 ---IEDMPMEPNDVIWNSLLAACRVQGNVE 656
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 136/265 (51%), Gaps = 9/265 (3%)
Query: 207 ASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED---SVKVF-N 262
S+L +C + + ++ H + K GL++ V++ T L+ E + +VF N
Sbjct: 36 PSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 263 QLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREV 322
+Y + + S + G +G A+ +F M+ +SP+ +T L AC+ +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 323 GEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQ 382
G QIH + K+G + +L++ Y +CG +D AR VFD ++E ++VS SMI YA+
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 383 NGFGYEALQLFKR-IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTR 441
F +A+ LF R ++ + PN VT + ++ AC +E G +++AF++N+ IE+
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVND 271
Query: 442 EHFTCMIDLLGRSKRFEEAAMLINE 466
+ ++D+ + + A L +E
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDE 296
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/675 (34%), Positives = 375/675 (55%), Gaps = 5/675 (0%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
S+L++ H R +H V+ GF S + + L+ Y G EA +F +MP
Sbjct: 265 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 324
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
+ +++WNS++++ V+ G+S A+ L +M+ G + TF++ A GR
Sbjct: 325 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
HGL VV GL + + +ALV MY K +M ++ V ++ +DVV + ALI GYA+
Sbjct: 385 HGLVVVSGL-FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN-GQLIHGFIVKSGLESFVASQT 242
+AL F+ M V N T+ S L++C GD + G+ +H +IV +G ES +
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 503
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
SL+TMY++C + S +FN L + +TW + + +G E + + +M VS
Sbjct: 504 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 563
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ F+ S L A + A+ E G+Q+H + KLG E + A ++Y KCG + + +
Sbjct: 564 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 623
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
L S N +I A ++G+ E F + ++G+ P VTF+S+L AC++ GLV+
Sbjct: 624 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 683
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNA 481
+G + + + +E EH C+IDLLGRS R EA I+++ P+ ++WR+LL +
Sbjct: 684 KGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLAS 743
Query: 482 CRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSP 541
C+IHG ++ K + +L P D ++L +N++A+ G+W V ++ + +KK
Sbjct: 744 CKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 803
Query: 542 ARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKM 601
A SWV + +V +F GD +HP+ EI+ L ++ + K GY DT LQD EE+K
Sbjct: 804 ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKE 863
Query: 602 SSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKR 661
+L+ HSE+LA+A+AL T +T +RIFKNLR+C DCHS KFV+ + GR I+ RD R
Sbjct: 864 HNLWNHSERLALAYALMSTPEGST-VRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYR 922
Query: 662 FHHFKGGLCSCKDYW 676
FHHF+ GLCSCKDYW
Sbjct: 923 FHHFERGLCSCKDYW 937
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 250/497 (50%), Gaps = 5/497 (1%)
Query: 5 SSLITQCAHTKSLTTLRA-VHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+SL+T C + S+ VH V SG S + ++ Y G V+ +RK+F+EMP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+R++V+W S++ + G+ ++ +++Y M EGV + + S + + L GR+
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
G V GLE + V ++L+ M + A+ +FD++ E+D + + ++ A YAQ+G
Sbjct: 182 IIGQVVKSGLES-KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
E+ +F M + N T+++ L+ G++ G+ IHG +VK G +S V
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+LL MY+ ++ VF Q+ ++W S + V +GR A+ + MI S
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
N T +S L AC + E G +H + G+ N+ G AL+++YGK G + ++R V
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG-LV 421
+ D+V+ N++I YA++ +AL F+ ++ G++ N +T +S+L AC G L+
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
E G L A++ + E +I + + + L N + N +++ W +L A
Sbjct: 481 ERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 482 CRIHGEIEMAEKIMRKV 498
HG E K++ K+
Sbjct: 540 NAHHGHGEEVLKLVSKM 556
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 220/444 (49%), Gaps = 15/444 (3%)
Query: 45 YIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTF 104
Y K G V AR LFD MP R+ V+WN+M+S V G + +E + M G+ P ++
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 105 SAIFKAFSELG-LVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV 163
+++ A G + R G + HG GL + DV+V++A++ +Y + + + VF+ +
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 164 LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQ 223
+++VV +T+L+ GY+ G E +++++ M V NE +++ ++SCG L D G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 224 LIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNG 283
I G +VKSGLES +A + SL++M V+ + +F+Q++ ++W S QNG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 284 REEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGA 343
E + +F M R N T+S++L ++ G IH + K+G +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 344 ALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAP 403
L+ +Y G +A VF + DL+S NS++ ++ +G +AL L + G +
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 404 NGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF------TCMIDLLGRSKRF 457
N VTF S L AC E+G L H + + F ++ + G+
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRIL-------HGLVVVSGLFYNQIIGNALVSMYGKIGEM 413
Query: 458 EEAAMLINEVTNPDVVLWRTLLNA 481
E+ ++ ++ DVV W L+
Sbjct: 414 SESRRVLLQMPRRDVVAWNALIGG 437
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 174/339 (51%), Gaps = 10/339 (2%)
Query: 146 MYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYT 205
MY KF +++ A +FD + ++ V + +++G + GL E +E FR+M D +KP+ +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 206 LASTLASCGNLGDSV-NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL 264
+AS + +CG G G +HGF+ KSGL S V T++L +Y +V S KVF ++
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 265 AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGE 324
+ V+WTS +VG G E + +++ M V N ++S ++ +C +G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 325 QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNG 384
QI K G+E +LI++ G GNVD A +FD ++E D +S NS+ AYAQNG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 385 FGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF 444
E+ ++F +++ N T ++L + + G + + +++ +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV-----VKMGFDSV 295
Query: 445 TCMIDLLGR----SKRFEEAAMLINEVTNPDVVLWRTLL 479
C+ + L R + R EA ++ ++ D++ W +L+
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 334
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/677 (34%), Positives = 368/677 (54%), Gaps = 14/677 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHV-ISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y L C +SL+ R +H + + LL + ++ Y +C S+ +A KLFDEM
Sbjct: 86 YQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMS 145
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
E + V+ +MISA+ G +AV L+ ML G P + ++ + K+ + +GR+
Sbjct: 146 ELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQ 205
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H + GL + + + +V+MY K + A VFD++ K V T L+ GY Q+G
Sbjct: 206 IHAHVIRAGL-CSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
+AL++F ++V V+ + + + L +C +L + G+ IH + K GLES V+ T
Sbjct: 265 RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGT 324
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
L+ Y +CS E + + F ++ + V+W++ + G Q + E AV F+ + + S
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASI 384
Query: 303 -NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
N FT +SI QACS A +G Q+HA K + G++ +ALI +Y KCG +D A V
Sbjct: 385 LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEV 444
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F+ + D+V+ + I +A G EAL+LF+++ G+ PN VTFI++L AC++AGLV
Sbjct: 445 FESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLV 504
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLN 480
E+G M +N+ T +H+ CMID+ RS +EA + + PD + W+ L+
Sbjct: 505 EQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564
Query: 481 ACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKS 540
C H +E+ E ++ QL P D ++L NLY AGKW + EM + + LKK
Sbjct: 565 GCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKE 624
Query: 541 PARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKK 600
+ SW+ ++H F+ GD HP+ EI++ L E G+ F + ++
Sbjct: 625 LSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD------GFMEGDMF---QCNMTER 675
Query: 601 MSSLYYHSEKLAIAFALWKTCGRTTA-IRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDS 659
L HSE+LAIAF L G A I++FKNLR C DCH + K V+L+TG +I+ RDS
Sbjct: 676 REQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDS 735
Query: 660 KRFHHFKGGLCSCKDYW 676
+RFHHFK G CSC DYW
Sbjct: 736 RRFHHFKEGKCSCNDYW 752
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 188/360 (52%), Gaps = 4/360 (1%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDE 60
+ Y++L+ + ++L R +HAHVI +G S + +++ Y+KCG + A+++FD+
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
M + V ++ + G+++ A++L+ +++ EGV D++ FS + KA + L + G
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
++ H LGLE +V V + LVD Y K A F + E + V ++A+I+GY Q
Sbjct: 305 KQIHACVAKLGLES-EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 181 SGLDGEALEVFREMVDRRVKP-NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
EA++ F+ + + N +T S +C L D G +H +K L
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
+++L+TMYS+C ++D+ +VF + V WT+F+ G G A+ +F +M+ C
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 483
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQ-IHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ PN T ++L ACS + E G+ + + K + D +I++Y + G +D+A
Sbjct: 484 MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 543
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 207/422 (49%), Gaps = 3/422 (0%)
Query: 79 HGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVF 138
H K +A E M GV +Y++ +F+A EL + +GR H + +G+E V
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVL 119
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR 198
+ + ++ MY + + DA +FD + E + V T +I+ YA+ G+ +A+ +F M+
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 199 VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSV 258
KP + L S N G+ IH ++++GL S + +T ++ MY +C + +
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
+VF+Q+A V T +VG Q GR A+ +F +++ V + F S +L+AC+S
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
+G+QIHA KLG+E G L++ Y KC + + A F + E + VS +++I
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 379 AYAQNGFGYEALQLFKRIK-KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
Y Q EA++ FK ++ K N T+ SI AC+ G Q+ A I
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 438 ELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRK 497
++ + +I + + ++A + + NPD+V W ++ +G A ++ K
Sbjct: 420 G-SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 478
Query: 498 VL 499
++
Sbjct: 479 MV 480
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREV--GEQIHAITTKL 333
+V L ++ + A +EM + VS + ++ + +AC R +R + G +H ++
Sbjct: 55 LVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEAC--RELRSLSHGRLLHD-RMRM 111
Query: 334 GMEGNKD-AGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQL 392
G+E ++ +Y +C +++ A +FD ++EL+ VS +MI AYA+ G +A+ L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 393 FKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFA 429
F + G P + ++L + N ++ G Q+ A
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/645 (34%), Positives = 368/645 (57%), Gaps = 35/645 (5%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
++ GY + G V +AR +FD MPE++ V+WN+++SA+V + K ++A L+ + ++
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV-- 220
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
+++ + F V+ + + V DV + ++ YA+ K+ +A +F
Sbjct: 221 --SWNCLLGGF-----VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF 273
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
D +DV +TA+++GY Q+ + EA E+F +M +R NE + + LA
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAG-------- 321
Query: 221 NGQLIHGFIVKSGLESF-------VASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWT 273
+ G ++ E F V++ +++T Y++C + ++ +F+++ V+W
Sbjct: 322 ---YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 274 SFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKL 333
+ + G Q+G A+ +F +M R N + SS L C+ E+G+Q+H K
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 334 GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLF 393
G E G AL+ +Y KCG++++A +F + D+VS N+MI Y+++GFG AL+ F
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 394 KRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
+ +K+ GL P+ T +++L AC++ GLV++G Q F M ++ + +H+ CM+DLLGR
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 454 SKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILL 512
+ E+A L+ + PD +W TLL A R+HG E+AE K+ + P + G ++LL
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 618
Query: 513 TNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
+NLYAS+G+W V +++ +RD +KK P SW+++ + HTF GD HP EIF L
Sbjct: 619 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 678
Query: 573 HELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWK-TCGRTTAIRIFK 631
EL + K GY T VL D+ EE+K + YHSE+LA+A+ + + + GR IR+ K
Sbjct: 679 EELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGR--PIRVIK 736
Query: 632 NLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
NLRVC DCH+ IK++ +TGR II RD+ RFHHFK G CSC DYW
Sbjct: 737 NLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 8/221 (3%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+SS ++ CA +L + +H ++ G+ + C +G+ L+ Y KCGS+ EA LF EM
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+ IV+WN+MI+ + HG + A+ + +M EG+ PD T A+ A S GLV GR+
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 123 A-HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAH-LVFDRVLEKDVVLFTALIAGYAQ 180
+ + G+ A +VD+ + + DAH L+ + E D ++ L+
Sbjct: 532 YFYTMTQDYGVMPNSQHYA-CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV 590
Query: 181 SGLDGEALEVFREMVDRRVKPNE--YTLASTL-ASCGNLGD 218
G + E E + + N Y L S L AS G GD
Sbjct: 591 HG-NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGD 630
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 143/330 (43%), Gaps = 64/330 (19%)
Query: 245 LTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI-RCSVSPN 303
++ Y R ++++VF ++ S V++ + G ++NG E+A +F EM R VS N
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
+I Y + N+ KAR +F+
Sbjct: 131 ----------------------------------------VMIKGYVRNRNLGKARELFE 150
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
++ E D+ S N+M+ YAQNG +A +F R+ + N V++ ++L A +EE
Sbjct: 151 IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEE 206
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACR 483
C LF K+ N L + C++ + K+ EA + + DVV W T++
Sbjct: 207 ACMLF---KSRENWALV--SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYA 261
Query: 484 IHGEIEMAEKIMRKVLQLAP-GDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPA 542
G+I+ A R++ +P D T + + Y N+++E + D K P
Sbjct: 262 QSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQ----NRMVEEARELFD----KMPE 309
Query: 543 RSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
R+ V + + ++ G+ A E+FD++
Sbjct: 310 RNEVSWNAMLAGYVQGERME-MAKELFDVM 338
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 143/338 (42%), Gaps = 40/338 (11%)
Query: 165 EKDVVLFTALIAGYAQSGLDGEALEVFRE-----------MVDRRVKPNEYTLASTLASC 213
+ D+ + I+ Y ++G EAL VF+ M+ ++ E+ LA L
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 214 GNLGDSVNGQ-LIHGFIVKSGL-----------ESFVASQTSLLTMYSRCSMVEDSVKVF 261
D V+ +I G++ L E V S ++L+ Y++ V+D+ VF
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 262 NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
+++ + V+W + + VQN + E A +F+ ++ L ++ + + E
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK---KKKIVE 237
Query: 322 VGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYA 381
+ ++ + + N +I Y + G +D+AR +FD D+ + +M+ Y
Sbjct: 238 ARQFFDSMNVRDVVSWN-----TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 382 QNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTR 441
QN EA +LF ++ + N V++ ++L +E +LF M N+
Sbjct: 293 QNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMP-CRNVST-- 345
Query: 442 EHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
+ MI + + EA L +++ D V W ++
Sbjct: 346 --WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/627 (34%), Positives = 358/627 (57%), Gaps = 39/627 (6%)
Query: 83 KQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASA 142
++AV+L G P A T+ + + S+ + G++ H G V + + +
Sbjct: 71 REAVQLLGR----AKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF-VPGIVIWNR 125
Query: 143 LVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR----- 197
L+ MYAK + DA VFD + +D+ + ++ GYA+ GL EA ++F EM ++
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 198 ------------------------RV---KPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
RV +PN +T++ +A+ + G+ IHG IV
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVS 290
++GL+S +SL+ MY +C ++++ +F+++ V+WTS + ++ R S
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 291 VFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYG 350
+F E++ PN +T + +L AC+ E+G+Q+H T++G + A ++L+++Y
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYT 365
Query: 351 KCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFIS 410
KCGN++ A+ V D + DLVS S+I AQNG EAL+ F + K G P+ VTF++
Sbjct: 366 KCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVN 425
Query: 411 ILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-N 469
+L AC +AGLVE+G + F + H + T +H+TC++DLL RS RFE+ +I+E+
Sbjct: 426 VLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMK 485
Query: 470 PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMK 529
P LW ++L C +G I++AE+ +++ ++ P + T++ + N+YA+AGKW + +M+
Sbjct: 486 PSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMR 545
Query: 530 TTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTR 589
++++ + K P SW ++ R+ H F+A D SHP ++I + L EL +K K GY P T
Sbjct: 546 KRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATS 605
Query: 590 FVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLL 649
VL D+ +E+K +L YHSEKLA+AFA+ T TAI++FKNLR C DCH IKF++ +
Sbjct: 606 LVLHDVEDEQKEENLVYHSEKLAVAFAILST-EEGTAIKVFKNLRSCVDCHGAIKFISNI 664
Query: 650 TGRDIIARDSKRFHHFKGGLCSCKDYW 676
T R I RDS RFH F+ G CSC DYW
Sbjct: 665 TKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 158/334 (47%), Gaps = 36/334 (10%)
Query: 21 RAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSH 79
+ +H H++ +G S +L L+D Y KCG + EAR +FD++ E+ +V+W SMI +
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 80 GKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFV 139
+ ++ L+ ++ P+ YTF+ + A ++L G++ HG +G + F
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS-FA 356
Query: 140 ASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRV 199
+S+LVDMY K + A V D + D+V +T+LI G AQ+G EAL+ F ++
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 200 KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVK 259
KP+ T + L++C H +V+ GLE F + +T R S D
Sbjct: 417 KPDHVTFVNVLSAC-----------THAGLVEKGLEFFYS-----ITEKHRLSHTSDH-- 458
Query: 260 VFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAM 319
+T V L ++GR E SV EM + P+ F +S+L CS+
Sbjct: 459 ------------YTCLVDLLARSGRFEQLKSVISEM---PMKPSKFLWASVLGGCSTYGN 503
Query: 320 REVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
++ E+ K+ E N + N+Y G
Sbjct: 504 IDLAEEAAQELFKIEPE-NPVTYVTMANIYAAAG 536
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 45/318 (14%)
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGR 284
+HGFI+K L SF AS L +S K FN +H V L + R
Sbjct: 12 LHGFILKRNLSSFHAS----LKRFS-------DKKFFN----PNHEDGGVVVERLCRANR 56
Query: 285 EEVAVSVF--REMIRCSVS-------PNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
A+ V ++++R +V P T +++Q CS E G+++H G
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 116
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKR 395
L+ +Y KCG++ AR VFD + DL S N M+ YA+ G EA +LF
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 396 IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREH-FTCMI------ 448
+ + + ++ +++ EE L++ M+ N +R + FT I
Sbjct: 177 MTE----KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPN---SRPNIFTVSIAVAAAA 229
Query: 449 --DLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDG 506
+ R K E ++ + D VLW +L++ G I+ A I K+++ D
Sbjct: 230 AVKCIRRGK--EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE---KDV 284
Query: 507 GTHILLTNLYASAGKWNQ 524
+ + + Y + +W +
Sbjct: 285 VSWTSMIDRYFKSSRWRE 302
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/568 (36%), Positives = 338/568 (59%), Gaps = 4/568 (0%)
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
D ++ + K + L+ GR H ++ + D+ + + L++MYAK + +A V
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHA-HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
F+++ ++D V +T LI+GY+Q +AL F +M+ PNE+TL+S + +
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
G +HGF VK G +S V ++LL +Y+R +++D+ VF+ L + V+W + + G
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 280 VQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNK 339
+ E A+ +F+ M+R P+ F+ +S+ ACSS E G+ +HA K G +
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 340 DAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKL 399
AG L+++Y K G++ AR +FD L + D+VS NS++ AYAQ+GFG EA+ F+ ++++
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 400 GLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEE 459
G+ PN ++F+S+L AC+++GL++EG + MK + I H+ ++DLLGR+
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 460 AAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYAS 518
A I E+ P +W+ LLNACR+H E+ V +L P D G H++L N+YAS
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 519 AGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEK 578
G+WN ++ +++ +KK PA SWV+++ +H F+A D HP+ EI E++ K
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAK 536
Query: 579 AKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGD 638
K LGY PDT V+ + ++++ +L YHSEK+A+AFAL T +T I I KN+RVCGD
Sbjct: 537 IKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGST-IHIKKNIRVCGD 595
Query: 639 CHSWIKFVTLLTGRDIIARDSKRFHHFK 666
CH+ IK + + GR+II RD+ RFHHFK
Sbjct: 596 CHTAIKLASKVVGREIIVRDTNRFHHFK 623
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 204/357 (57%), Gaps = 2/357 (0%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEM 61
FY++L+ +C K L R VHAH++ S F + ++G+ L++ Y KCGS+ EARK+F++M
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
P+R VTW ++IS + H + A+ + ML G P+ +T S++ KA + G
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ HG V G + +V V SAL+D+Y ++ M DA LVFD + ++ V + ALIAG+A+
Sbjct: 182 QLHGFCVKCGFDS-NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
+ALE+F+ M+ +P+ ++ AS +C + G G+ +H +++KSG + +
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
+LL MY++ + D+ K+F++LA V+W S + Q+G + AV F EM R +
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
PN + S+L ACS + + G + + K G+ +++L G+ G++++A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y+SL C+ T L + VHA++I SG G+ L+D Y K GS+ +ARK+FD +
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+R +V+WNS+++A+ HG K+AV + M G+ P+ +F ++ A S GL+ G
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKF-DKMRDAHLVFDRVLEKDVVLFTALI 175
+ L G+ V + + +VD+ + D R + + +E ++ AL+
Sbjct: 385 YYELMKKDGI-VPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/638 (35%), Positives = 366/638 (57%), Gaps = 5/638 (0%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
L+ Y+K +AR++FDEM R V++N+MI ++ +++V ++ L + PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPD 306
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
T S++ +A L + + + + G VL+ V + L+D+YAK M A VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF-VLESTVRNILIDVYAKCGDMITARDVF 365
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
+ + KD V + ++I+GY QSG EA+++F+ M+ + + T ++ L D
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLV 280
G+ +H +KSG+ ++ +L+ MY++C V DS+K+F+ + VTW + + V
Sbjct: 426 FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 485
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
+ G + V +M + V P+ T L C+S A + +G++IH + G E
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
G ALI +Y KCG ++ + VF+ ++ D+V+ MIYAY G G +AL+ F ++K G
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA 460
+ P+ V FI+I+ AC+++GLV+EG F MK ++ I+ EH+ C++DLL RS++ +A
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 665
Query: 461 AMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASA 519
I + PD +W ++L ACR G++E AE++ R++++L P D G IL +N YA+
Sbjct: 666 EEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAAL 725
Query: 520 GKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKA 579
KW++V ++ +++D + K+P SW++V + VH F +GD S P++ I+ L L
Sbjct: 726 RKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLM 785
Query: 580 KTLGYSPDTRFVLQDLHEEKKMSSLYY-HSEKLAIAFALWKTCGRTTAIRIFKNLRVCGD 638
GY PD R V Q+L EE++ L HSE+LAIAF L T T +++ KNLRVCGD
Sbjct: 786 AKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNT-EPGTPLQVMKNLRVCGD 844
Query: 639 CHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
CH K ++ + GR+I+ RD+ RFH FK G CSCKD W
Sbjct: 845 CHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 261/492 (53%), Gaps = 10/492 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ S+I CA V+ ++ GF S +G+ L+D Y + G + AR++FDEMP
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP 168
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
R +V+WNS+IS + SHG ++A+E+Y + ++PD++T S++ AF L +V+ G+
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
HG A+ G+ + V V + LV MY KF + DA VFD + +D V + +I GY +
Sbjct: 229 LHGFALKSGVNSV-VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG--LESFVAS 240
+ E++ +F E +D + KP+ T++S L +CG+L D + I+ +++K+G LES V
Sbjct: 288 MVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV-- 344
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+ L+ +Y++C + + VFN + V+W S + G +Q+G A+ +F+ M+
Sbjct: 345 RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
+ T ++ + A + G+ +H+ K G+ + ALI++Y KCG V +
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
+F + D V+ N++I A + G LQ+ +++K + P+ TF+ L C +
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 524
Query: 421 VEEGCQLF-AFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
G ++ ++ + EL + +I++ + E ++ + ++ DVV W ++
Sbjct: 525 KRLGKEIHCCLLRFGYESEL--QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMI 582
Query: 480 NACRIHGEIEMA 491
A ++GE E A
Sbjct: 583 YAYGMYGEGEKA 594
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 255/492 (51%), Gaps = 10/492 (2%)
Query: 12 AHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEM-PERHIVTW 69
+ + +L LR +HA VIS G S KLID Y A + +F + P +++ W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVV 129
NS+I A +G +A+E YG + V PD YTF ++ KA + L G + +
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 130 LGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALE 189
+G E D+FV +ALVDMY++ + A VFD + +D+V + +LI+GY+ G EALE
Sbjct: 135 MGFES-DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 190 VFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYS 249
++ E+ + + P+ +T++S L + GNL GQ +HGF +KSG+ S V L+ MY
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYL 253
Query: 250 RCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSS 309
+ D+ +VF+++ V++ + + G ++ E +V +F E + P+ T+SS
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSS 312
Query: 310 ILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELD 369
+L+AC + + I+ K G LI++Y KCG++ AR VF+ + D
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 370 LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFA 429
VS NS+I Y Q+G EA++LFK + + + +T++ ++ ++ G L +
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 430 F-MKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEI 488
+K+ I+L+ + +ID+ + ++ + + + D V W T+++AC G+
Sbjct: 433 NGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 489 EMAEKI---MRK 497
++ MRK
Sbjct: 491 ATGLQVTTQMRK 502
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 211/423 (49%), Gaps = 22/423 (5%)
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE-KDVVLFTALIAGYA 179
RR H L + LGL+ D F + L+D Y+ F + + VF RV K+V L+ ++I ++
Sbjct: 24 RRIHALVISLGLDSSDFF-SGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFS 82
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
++GL EALE + ++ + +V P++YT S + +C L D+ G L++ I+ G ES +
Sbjct: 83 KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
+L+ MYSR ++ + +VF+++ V+W S + G +G E A+ ++ E+
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
+ P+ FT+SS+L A + + + G+ +H K G+ L+ +Y K AR
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISILLACNNA 418
VFD + D VS N+MI Y + E++++F ++ L P+ +T S+L AC +
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHL 320
Query: 419 GLVEEGCQLFAFM-KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRT 477
+ ++ +M K +E T + +ID+ + A + N + D V W +
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 478 LLNACRIHGEIEMAEKIMRKVLQLAP-GDGGTHILLTNLYASAGKWNQVIEMKTTIRDLK 536
+++ G++ A K+ + ++ + D T+++L I + T + DLK
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML-------------ISVSTRLADLK 425
Query: 537 LKK 539
K
Sbjct: 426 FGK 428
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/563 (37%), Positives = 333/563 (59%), Gaps = 8/563 (1%)
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFD---KMRDAHLVFDRVLEK-DVVLFTALIA 176
R+ H ++ G+ + D + L+ M AH VF ++ + +V ++ LI
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 177 GYAQSGLDGEALEVFREM-VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE 235
GYA+ G A ++REM V V+P+ +T + + + D G+ IH +++SG
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 236 SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM 295
S + Q SLL +Y+ C V + KVF+++ V W S + G +NG+ E A++++ EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 296 IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNV 355
+ P+ FT+ S+L AC+ +G+++H K+G+ N + L++LY +CG V
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 356 DKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKL-GLAPNGVTFISILLA 414
++A+++FD + + + VS S+I A NGFG EA++LFK ++ GL P +TF+ IL A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 415 CNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVV 473
C++ G+V+EG + F M+ + IE EHF CM+DLL R+ + ++A I + P+VV
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 474 LWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIR 533
+WRTLL AC +HG+ ++AE ++LQL P G ++LL+N+YAS +W+ V +++ +
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 534 DLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQ 593
+KK P S V+V VH F+ GD SHP++ I+ L E+ + ++ GY P V
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
Query: 594 DLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRD 653
D+ EE+K +++ YHSEK+AIAF L T R + I + KNLRVC DCH IK V+ + R+
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPER-SPITVVKNLRVCADCHLAIKLVSKVYNRE 572
Query: 654 IIARDSKRFHHFKGGLCSCKDYW 676
I+ RD RFHHFK G CSC+DYW
Sbjct: 573 IVVRDRSRFHHFKNGSCSCQDYW 595
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 212/407 (52%), Gaps = 13/407 (3%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSY--CLLGHKLIDGYIKCGS---VAEARKLFDEMP 62
+ Q S+T LR +HA I G S LG LI + S ++ A K+F ++
Sbjct: 21 LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE 80
Query: 63 ER-HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL-PDAYTFSAIFKAFSELGLVRYG 120
+ ++ WN++I + G S A LY M V G++ PD +T+ + KA + + VR G
Sbjct: 81 KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
H + + G L ++V ++L+ +YA + A+ VFD++ EKD+V + ++I G+A+
Sbjct: 141 ETIHSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
+G EAL ++ EM + +KP+ +T+ S L++C +G G+ +H +++K GL + S
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS- 299
LL +Y+RC VE++ +F+++ + V+WTS +VGL NG + A+ +F+ M
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 300 VSPNPFTLSSILQACSSRAMREVG-EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ P T IL ACS M + G E + + +E + +++L + G V KA
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 359 RSVFDVLT-ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPN 404
+ + ++V +++ A +G L F RI+ L L PN
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDS--DLAEFARIQILQLEPN 424
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 136/246 (55%), Gaps = 25/246 (10%)
Query: 5 SSLITQCAHT-----KSLTTL------RAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVA 52
S L+ HT K++TT+ +H+ VI SGF S + + L+ Y CG VA
Sbjct: 114 SGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVA 173
Query: 53 EARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFS 112
A K+FD+MPE+ +V WNS+I+ +GK ++A+ LY M +G+ PD +T ++ A +
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 113 ELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFT 172
++G + G+R H + +GL ++ ++ L+D+YA+ ++ +A +FD +++K+ V +T
Sbjct: 234 KIGALTLGKRVHVYMIKVGL-TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292
Query: 173 ALIAGYAQSGLDGEALEVFREMVDRR-VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVK 231
+LI G A +G EA+E+F+ M + P E T L +C + G +VK
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG-----------MVK 341
Query: 232 SGLESF 237
G E F
Sbjct: 342 EGFEYF 347
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/680 (32%), Positives = 376/680 (55%), Gaps = 12/680 (1%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVI----SSGFSYCLLGHKLIDGYIKCGSVAEARKLFDE 60
+ L+ CA++ L ++HAH+I SS + LI+ Y+KC ARKLFD
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLPDAYTFSAIFKAFSELGLVRY 119
MPER++V+W +M+ + + G + ++L+ +M G P+ + + +FK+ S G +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G++ HG + GL + FV + LV MY+ +A V D + D+ +F++ ++GY
Sbjct: 155 GKQFHGCFLKYGL-ISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
+ G E L+V R+ + N T S+L NL D +H +V+ G + V
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
+ +L+ MY +C V + +VF+ + T+ + Q+ E A+++F +M
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
V PN +T + +L + + ++ + G+ +H + K G + G AL+N+Y K G+++ AR
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
F +T D+V+ N+MI + +G G EAL+ F R+ G PN +TFI +L AC++ G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNP---DVVLWR 476
VE+G F + +++ +H+TC++ LL ++ F++A + T P DVV WR
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMR--TAPIEWDVVAWR 511
Query: 477 TLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLK 536
TLLNAC + + +K+ ++ P D G ++LL+N++A + +W V ++++ + +
Sbjct: 512 TLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRG 571
Query: 537 LKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLH 596
+KK P SW+ + + H F+A D HP I+ + E++ K K LGYSPD D+
Sbjct: 572 VKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVD 631
Query: 597 EEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIA 656
EE++ +L YHSEKLA+A+ L KT + + + KN+R+C DCHS IK ++ ++ R I+
Sbjct: 632 EEQREDNLSYHSEKLAVAYGLIKT-PEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVI 690
Query: 657 RDSKRFHHFKGGLCSCKDYW 676
RDS RFHHF G CSC DYW
Sbjct: 691 RDSNRFHHFLDGQCSCCDYW 710
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 301 SPNPFT-LSSILQACSSRAMREVGEQIHA---ITTKLGMEGNKDAGAALINLYGKCGNVD 356
+P P L+ +L+ C++ + +GE IHA +T + + +LINLY KC
Sbjct: 27 TPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETV 86
Query: 357 KARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA-PNGVTFISILLAC 415
+AR +FD++ E ++VS +M+ Y +GF +E L+LFK + G + PN + +C
Sbjct: 87 RARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSC 146
Query: 416 NNAGLVEEGCQL 427
+N+G +EEG Q
Sbjct: 147 SNSGRIEEGKQF 158
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/668 (34%), Positives = 368/668 (55%), Gaps = 5/668 (0%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
S+L++ H R +H V+ GF S + + L+ Y G EA +F +MP
Sbjct: 248 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 307
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
+ +++WNS++++ V+ G+S A+ L +M+ G + TF++ A GR
Sbjct: 308 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
HGL VV GL + + +ALV MY K +M ++ V ++ +DVV + ALI GYA+
Sbjct: 368 HGLVVVSGL-FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN-GQLIHGFIVKSGLESFVASQT 242
+AL F+ M V N T+ S L++C GD + G+ +H +IV +G ES +
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 486
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
SL+TMY++C + S +FN L + +TW + + +G E + + +M VS
Sbjct: 487 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 546
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ F+ S L A + A+ E G+Q+H + KLG E + A ++Y KCG + + +
Sbjct: 547 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 606
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
L S N +I A ++G+ E F + ++G+ P VTF+S+L AC++ GLV+
Sbjct: 607 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 666
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNA 481
+G + + + +E EH C+IDLLGRS R EA I+++ P+ ++WR+LL +
Sbjct: 667 KGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLAS 726
Query: 482 CRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSP 541
C+IHG ++ K + +L P D ++L +N++A+ G+W V ++ + +KK
Sbjct: 727 CKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 786
Query: 542 ARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKM 601
A SWV + +V +F GD +HP+ EI+ L ++ + K GY DT LQD EE+K
Sbjct: 787 ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKE 846
Query: 602 SSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKR 661
+L+ HSE+LA+A+AL T +T +RIFKNLR+C DCHS KFV+ + GR I+ RD R
Sbjct: 847 HNLWNHSERLALAYALMSTPEGST-VRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYR 905
Query: 662 FHHFKGGL 669
FHHF+ GL
Sbjct: 906 FHHFERGL 913
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 250/497 (50%), Gaps = 5/497 (1%)
Query: 5 SSLITQCAHTKSLTTLRA-VHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+SL+T C + S+ VH V SG S + ++ Y G V+ +RK+F+EMP
Sbjct: 45 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 104
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+R++V+W S++ + G+ ++ +++Y M EGV + + S + + L GR+
Sbjct: 105 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 164
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
G V GLE + V ++L+ M + A+ +FD++ E+D + + ++ A YAQ+G
Sbjct: 165 IIGQVVKSGLES-KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 223
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
E+ +F M + N T+++ L+ G++ G+ IHG +VK G +S V
Sbjct: 224 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 283
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+LL MY+ ++ VF Q+ ++W S + V +GR A+ + MI S
Sbjct: 284 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 343
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
N T +S L AC + E G +H + G+ N+ G AL+++YGK G + ++R V
Sbjct: 344 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG-LV 421
+ D+V+ N++I YA++ +AL F+ ++ G++ N +T +S+L AC G L+
Sbjct: 404 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 463
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
E G L A++ + E +I + + + L N + N +++ W +L A
Sbjct: 464 ERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 482 CRIHGEIEMAEKIMRKV 498
HG E K++ K+
Sbjct: 523 NAHHGHGEEVLKLVSKM 539
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 211/428 (49%), Gaps = 15/428 (3%)
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELG-LVRY 119
MP R+ V+WN+M+S V G + +E + M G+ P ++ +++ A G + R
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G + HG GL + DV+V++A++ +Y + + + VF+ + +++VV +T+L+ GY+
Sbjct: 61 GVQVHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
G E +++++ M V NE +++ ++SCG L D G+ I G +VKSGLES +A
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
+ SL++M V+ + +F+Q++ ++W S QNG E + +F M R
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
N T+S++L ++ G IH + K+G + L+ +Y G +A
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
VF + DL+S NS++ ++ +G +AL L + G + N VTF S L AC
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 420 LVEEGCQLFAFMKNNHNIELTREHF------TCMIDLLGRSKRFEEAAMLINEVTNPDVV 473
E+G L H + + F ++ + G+ E+ ++ ++ DVV
Sbjct: 360 FFEKGRIL-------HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 412
Query: 474 LWRTLLNA 481
W L+
Sbjct: 413 AWNALIGG 420
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/621 (32%), Positives = 365/621 (58%), Gaps = 3/621 (0%)
Query: 57 LFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGL 116
LF +I +NS+I+ V++ + ++L+ ++ G+ +TF + KA +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 117 VRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIA 176
+ G H L V G DV ++L+ +Y+ ++ DAH +FD + ++ VV +TAL +
Sbjct: 127 RKLGIDLHSLVVKCGFN-HDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 177 GYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES 236
GY SG EA+++F++MV+ VKP+ Y + L++C ++GD +G+ I ++ + ++
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI 296
+T+L+ +Y++C +E + VF+ + VTW++ + G N + + +F +M+
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 297 RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVD 356
+ ++ P+ F++ L +C+S ++GE ++ + N ALI++Y KCG +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 357 KARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN 416
+ VF + E D+V +N+ I A+NG + +F + +KLG++P+G TF+ +L C
Sbjct: 366 RGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCV 425
Query: 417 NAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLW 475
+AGL+++G + F + + ++ T EH+ CM+DL GR+ ++A LI ++ P+ ++W
Sbjct: 426 HAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDL 535
LL+ CR+ + ++AE ++++++ L P + G ++ L+N+Y+ G+W++ E++ +
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKK 545
Query: 536 KLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDL 595
+KK P SW++++ +VH F+A D SHP + +I+ L +L + + +G+ P T FV D+
Sbjct: 546 GMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDV 605
Query: 596 HEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDII 655
EE+K L YHSEKLA+A L T IR+ KNLRVCGDCH +K ++ +T R+I+
Sbjct: 606 EEEEKERVLGYHSEKLAVALGLIST-DHGQVIRVVKNLRVCGDCHEVMKLISKITRREIV 664
Query: 656 ARDSKRFHHFKGGLCSCKDYW 676
RD+ RFH F G CSC DYW
Sbjct: 665 VRDNNRFHCFTNGSCSCNDYW 685
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 189/361 (52%), Gaps = 11/361 (3%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGH-KLIDGYIKCGSVAEARKLFDEMP 62
+ ++ C S +H+ V+ GF++ + L+ Y G + +A KLFDE+P
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP 173
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+R +VTW ++ S + + G+ ++A++L+ M+ GV PD+Y + A V G
Sbjct: 174 DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA-----CVHVGDL 228
Query: 123 AHGLAVVLGLEVLDV----FVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G +V +E +++ FV + LV++YAK KM A VFD ++EKD+V ++ +I GY
Sbjct: 229 DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY 288
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
A + E +E+F +M+ +KP+++++ L+SC +LG G+ I + + +
Sbjct: 289 ASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNL 348
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
+L+ MY++C + +VF ++ V + + GL +NG +++ +VF + +
Sbjct: 349 FMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKL 408
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQ-IHAITTKLGMEGNKDAGAALINLYGKCGNVDK 357
+SP+ T +L C + + G + +AI+ ++ + +++L+G+ G +D
Sbjct: 409 GISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDD 468
Query: 358 A 358
A
Sbjct: 469 A 469
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 184/376 (48%), Gaps = 1/376 (0%)
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
D F+ + L+ F + + ++L+F ++ L+ +LI G+ + L E L++F +
Sbjct: 44 DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIR 103
Query: 196 DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE 255
+ + +T L +C G +H +VK G VA+ TSLL++YS +
Sbjct: 104 KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLN 163
Query: 256 DSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS 315
D+ K+F+++ S VTWT+ G +GR A+ +F++M+ V P+ + + +L AC
Sbjct: 164 DAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACV 223
Query: 316 SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNS 375
+ GE I ++ M+ N L+NLY KCG ++KARSVFD + E D+V+ ++
Sbjct: 224 HVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWST 283
Query: 376 MIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
MI YA N F E ++LF ++ + L P+ + + L +C + G ++ G + + + H
Sbjct: 284 MIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI-DRH 342
Query: 436 NIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIM 495
+ID+ + + E+ D+V+ ++ +G ++++ +
Sbjct: 343 EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF 402
Query: 496 RKVLQLAPGDGGTHIL 511
+ +L G+ L
Sbjct: 403 GQTEKLGISPDGSTFL 418
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 158/318 (49%), Gaps = 16/318 (5%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
L++ Y KCG + +AR +FD M E+ IVTW++MI + S+ K+ +EL+ ML E + PD
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL-DVFVASALVDMYAKFDKMRDAHLV 159
++ + + LG + G G++++ E L ++F+A+AL+DMYAK M V
Sbjct: 313 QFSIVGFLSSCASLGALDLGEW--GISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
F + EKD+V+ A I+G A++G + VF + + P+ T L C + G
Sbjct: 371 FKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLI 430
Query: 220 VNG-QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH-VTWTSFVV 277
+G + + L+ V ++ ++ R M++D+ ++ + + + W + +
Sbjct: 431 QDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
Query: 278 GLVQNGREEVAVSVFREMIRCSVSP----NPFTLSSILQACSSRAMREVGEQIHAITTKL 333
G ++A +V +E+I ++ P N LS+I S + ++ + K
Sbjct: 491 GCRLVKDTQLAETVLKELI--ALEPWNAGNYVQLSNIY---SVGGRWDEAAEVRDMMNKK 545
Query: 334 GMEGNKDAGAALINLYGK 351
GM+ K G + I L GK
Sbjct: 546 GMK--KIPGYSWIELEGK 561
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/563 (36%), Positives = 335/563 (59%), Gaps = 3/563 (0%)
Query: 115 GLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTAL 174
G V + HG + + LE DV + + L++ Y+K + A VFD +LE+ +V + +
Sbjct: 75 GAVMEAKACHGKIIRIDLEG-DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 133
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL 234
I Y ++ ++ EAL++F EM + K +E+T++S L++CG D++ + +H VK+ +
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 235 ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFRE 294
+ + T+LL +Y++C M++D+V+VF + S VTW+S V G VQN E A+ ++R
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 295 MIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGN 354
R S+ N FTLSS++ ACS+ A G+Q+HA+ K G N ++ +++Y KCG+
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGS 313
Query: 355 VDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
+ ++ +F + E +L N++I +A++ E + LF+++++ G+ PN VTF S+L
Sbjct: 314 LRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 373
Query: 415 CNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVV 473
C + GLVEEG + F M+ + + H++CM+D+LGR+ EA LI + +P
Sbjct: 374 CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS 433
Query: 474 LWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIR 533
+W +LL +CR++ +E+AE K+ +L P + G H+LL+N+YA+ +W ++ + + +R
Sbjct: 434 IWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLR 493
Query: 534 DLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQ 593
D +KK +SW+D+ +VHTF G+ HPR EI L L+ K + GY P L
Sbjct: 494 DCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELH 553
Query: 594 DLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRD 653
D+ KK L HSEKLA+ F L ++ +RI KNLR+C DCH ++K ++ T R
Sbjct: 554 DVEIGKKEELLMQHSEKLALVFGLM-CLPESSPVRIMKNLRICVDCHEFMKAASMATRRF 612
Query: 654 IIARDSKRFHHFKGGLCSCKDYW 676
II RD RFHHF G CSC D+W
Sbjct: 613 IIVRDVNRFHHFSDGHCSCGDFW 635
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 190/359 (52%), Gaps = 3/359 (0%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDE 60
N ++ CA ++ +A H +I L + LI+ Y KCG V AR++FD
Sbjct: 62 NLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDG 121
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
M ER +V+WN+MI + + +A++++ M EG +T S++ A
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
++ H L+V ++ L+++V +AL+D+YAK ++DA VF+ + +K V +++++AGY Q
Sbjct: 182 KKLHCLSVKTCID-LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ 240
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
+ EAL ++R ++ N++TL+S + +C NL + G+ +H I KSG S V
Sbjct: 241 NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+S + MY++C + +S +F+++ + W + + G ++ R + + +F +M + +
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGM 360
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAIT-TKLGMEGNKDAGAALINLYGKCGNVDKA 358
PN T SS+L C + E G + + T G+ N + ++++ G+ G + +A
Sbjct: 361 HPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 147/302 (48%), Gaps = 7/302 (2%)
Query: 202 NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF 261
N + L C G + + HG I++ LE V L+ YS+C VE + +VF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 262 NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
+ + S V+W + + +N E A+ +F EM + FT+SS+L AC
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 322 VGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYA 381
+++H ++ K ++ N G AL++LY KCG + A VF+ + + V+ +SM+ Y
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 382 QNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN---HNIE 438
QN EAL L++R +++ L N T S++ AC+N + EG Q+ A + + N+
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 439 LTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
+ + +D+ + E+ ++ +EV ++ LW T+++ H + + K+
Sbjct: 300 VA----SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
Query: 499 LQ 500
Q
Sbjct: 356 QQ 357
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 143/275 (52%), Gaps = 4/275 (1%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPE 63
SS+++ C + +H + + L +G L+D Y KCG + +A ++F+ M +
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD 225
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
+ VTW+SM++ +V + ++A+ LY + + +T S++ A S L + G++
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H + G +VFVAS+ VDMYAK +R+++++F V EK++ L+ +I+G+A+
Sbjct: 286 HAVICKSGFGS-NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 344
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKS-GLESFVASQT 242
E + +F +M + PNE T +S L+ CG+ G G+ + + GL V +
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVT-WTSFV 276
++ + R ++ ++ ++ + + + W S +
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 248/784 (31%), Positives = 397/784 (50%), Gaps = 115/784 (14%)
Query: 2 NFYSSLITQCAHTK--SLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLF 58
N Y++ + C + SL RAVH ++I+ GF + ++LID Y K + AR+LF
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 59 DEMPE---------------------------------RHIVTWNSMISAHVSHGKSKQA 85
DE+ E R V +N+MI+ + A
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 86 VELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA----HGLAVVLGLEVLDVFVAS 141
+ L+ M EG PD +TF+++ L LV + H A+ G + V++
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAG---LALVADDEKQCVQFHAAALKSGAGYI-TSVSN 188
Query: 142 ALVDMYAKFDK----MRDAHLVFDRVLEKD------------------------------ 167
ALV +Y+K + A VFD +LEKD
Sbjct: 189 ALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN 248
Query: 168 --VVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLI 225
+V + A+I+GY G EALE+ R MV ++ +E+T S + +C G G+ +
Sbjct: 249 MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 226 HGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF---------- 275
H ++++ SF SL+++Y +C +++ +F ++ V+W +
Sbjct: 309 HAYVLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 276 ---------------------VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQAC 314
+ GL +NG E + +F M R P + S +++C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 315 SSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVN 374
+ G+Q HA K+G + + AG ALI +Y KCG V++AR VF + LD VS N
Sbjct: 428 AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN 487
Query: 375 SMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN 434
++I A Q+G G EA+ +++ + K G+ P+ +T +++L AC++AGLV++G + F M+
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETV 547
Query: 435 HNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEK 493
+ I +H+ +IDLL RS +F +A +I + P +W LL+ CR+HG +E+
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGII 607
Query: 494 IMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVH 553
K+ L P GT++LL+N++A+ G+W +V ++ +RD +KK A SW++++ +VH
Sbjct: 608 AADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVH 667
Query: 554 TFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEE-KKMSSLYYHSEKLA 612
TF+ D SHP A ++ L +L ++ + LGY PDT FVL D+ + K L HSEK+A
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIA 727
Query: 613 IAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSC 672
+AF L K TT IRIFKNLR CGDCH++ +F++ + RDII RD KRFHHF+ G CSC
Sbjct: 728 VAFGLMKLPPGTT-IRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSC 786
Query: 673 KDYW 676
++W
Sbjct: 787 GNFW 790
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/686 (34%), Positives = 379/686 (55%), Gaps = 22/686 (3%)
Query: 2 NFYSSLITQCAHTKSLTTLRAV-HAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDE 60
N + +L ++C L+ RA ++ + FSY ++ + Y K + AR+LFDE
Sbjct: 47 NHFVNLYSKCGR---LSYARAAFYSTEEPNVFSYNVI----VKAYAKDSKIHIARQLFDE 99
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+P+ V++N++IS + ++ A+ L+ M G D +T S + A + V
Sbjct: 100 IPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLI 157
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE-KDVVLFTALIAGYA 179
++ H +V G + V +A V Y+K +R+A VF + E +D V + ++I Y
Sbjct: 158 KQLHCFSVSGGFDSYSS-VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYG 216
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
Q +AL +++EM+ + K + +TLAS L + +L + G+ HG ++K+G
Sbjct: 217 QHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH 276
Query: 240 SQTSLLTMYSRCSMVE---DSVKVFNQLAYASHVTWTSFVVGLVQNGR-EEVAVSVFREM 295
+ L+ YS+C + DS KVF ++ V W + + G N E AV FR+M
Sbjct: 277 VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM 336
Query: 296 IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNK-DAGAALINLYGKCGN 354
R P+ + + ACS+ + +QIH + K + N+ ALI+LY K GN
Sbjct: 337 QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGN 396
Query: 355 VDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
+ AR VFD + EL+ VS N MI YAQ+G G EAL L++R+ G+APN +TF+++L A
Sbjct: 397 LQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456
Query: 415 CNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVV 473
C + G V+EG + F MK IE EH++CMIDLLGR+ + EEA I+ + P V
Sbjct: 457 CAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSV 516
Query: 474 LWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIR 533
W LL ACR H + +AE+ +++ + P +++L N+YA A KW ++ ++ ++R
Sbjct: 517 AWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMR 576
Query: 534 DLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQ 593
+++K P SW++V ++ H F+A D SHP E+ + L E+++K K +GY D ++ +
Sbjct: 577 GKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMV 636
Query: 594 DLHEEKKMSS---LYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLT 650
E + L +HSEKLA+AF L T + + KNLR+CGDCH+ IKF++ +
Sbjct: 637 KEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELV-VVKNLRICGDCHNAIKFMSAVA 695
Query: 651 GRDIIARDSKRFHHFKGGLCSCKDYW 676
GR+II RD+ RFH FK G CSC DYW
Sbjct: 696 GREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 49/330 (14%)
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRC-------------------------- 251
D G+ +H VKS + S + +YS+C
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 252 -----SMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFT 306
S + + ++F+++ V++ + + G A+ +F+ M + + FT
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 307 LSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
LS ++ AC R ++ +Q+H + G + A + Y K G + +A SVF +
Sbjct: 143 LSGLIAACCDRV--DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 367 EL-DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGC 425
EL D VS NSMI AY Q+ G +AL L+K + G + T S+L A + + G
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 426 QLF------AFMKNNH-NIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTL 478
Q F +N+H L + C G ++ + E+ +PD+V+W T+
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKC-----GGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 479 LNACRIHGEI-EMAEKIMRKVLQLA--PGD 505
++ ++ E+ E A K R++ ++ P D
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDD 345
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 383/719 (53%), Gaps = 56/719 (7%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKL------IDGYIKCGSVAEARKLF 58
++++ + + KSL ++ +HAH++ + ++ HKL + +++ A +F
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRT-----VINHKLNSFLFNLSVSSSSINLSYALNVF 67
Query: 59 DEMP-ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLV 117
+P + +N + + + + Y + G D ++F I KA S++ +
Sbjct: 68 SSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSAL 127
Query: 118 RYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAG 177
G HG+A + + D FV + +DMYA ++ A VFD + +DVV + +I
Sbjct: 128 FEGMELHGVAFKIAT-LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIER 186
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF 237
Y + GL EA ++F EM D V P+E L + +++CG G+ + I+ F++++ +
Sbjct: 187 YCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMD 246
Query: 238 VASQTSLLTMY-------------------------------SRCSMVEDSVKVFNQLAY 266
T+L+TMY S+C ++D+ +F+Q
Sbjct: 247 THLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEK 306
Query: 267 ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI 326
V WT+ + V++ + A+ VF EM + P+ ++ S++ AC++ + + + +
Sbjct: 307 KDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV 366
Query: 327 HAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFG 386
H+ G+E ALIN+Y KCG +D R VF+ + ++VS +SMI A + +G
Sbjct: 367 HSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEA 426
Query: 387 YEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTC 446
+AL LF R+K+ + PN VTF+ +L C+++GLVEEG ++FA M + +NI EH+ C
Sbjct: 427 SDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGC 486
Query: 447 MIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGD 505
M+DL GR+ EA +I + +VV+W +L++ACRIHGE+E+ + +++L+L P
Sbjct: 487 MVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDH 546
Query: 506 GGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRA 565
G +L++N+YA +W V ++ + + + K S +D + + H F+ GD H ++
Sbjct: 547 DGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQS 606
Query: 566 HEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWK------ 619
+EI+ L E++ K K GY PD VL D+ EE+K + +HSEKLA+ F L
Sbjct: 607 NEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEE 666
Query: 620 --TCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
+CG IRI KNLRVC DCH + K V+ + R+II RD RFH +K GLCSC+DYW
Sbjct: 667 KDSCG---VIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/621 (34%), Positives = 358/621 (57%), Gaps = 12/621 (1%)
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
+ +WNS+I+ G S +A+ + +M + P +F KA S L + G++ H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG 185
A V G + D+FV+SAL+ MY+ K+ DA VFD + ++++V +T++I GY +G
Sbjct: 101 QAFVFGYQS-DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 186 EALEVFREMV------DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
+A+ +F++++ D + + L S +++C + + IH F++K G + V+
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 240 SQTSLLTMYSRCSM--VEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR 297
+LL Y++ V + K+F+Q+ V++ S + Q+G A VFR +++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 298 CSV-SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVD 356
V + N TLS++L A S +G+ IH ++G+E + G ++I++Y KCG V+
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 357 KARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN 416
AR FD + ++ S +MI Y +G +AL+LF + G+ PN +TF+S+L AC+
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 417 NAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLW 475
+AGL EG + F MK +E EH+ CM+DLLGR+ ++A LI + PD ++W
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDL 535
+LL ACRIH +E+AE + ++ +L + G ++LL+++YA AG+W V ++ +++
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 536 KLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDL 595
L K P S ++++ EVH F+ GD HP+ +I++ L EL K GY +T V D+
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV 579
Query: 596 HEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDII 655
EE+K +L HSEKLAIAF + T +T + + KNLRVC DCH+ IK ++ + R+ +
Sbjct: 580 DEEEKEMTLRVHSEKLAIAFGIMNTVPGST-VNVVKNLRVCSDCHNVIKLISKIVDREFV 638
Query: 656 ARDSKRFHHFKGGLCSCKDYW 676
RD+KRFHHFK G CSC DYW
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 200/387 (51%), Gaps = 16/387 (4%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ I C+ + + + H G+ S + LI Y CG + +ARK+FDE+P
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLV------EGVLPDAYTFSAIFKAFSELGL 116
+R+IV+W SMI + +G + AV L+ ++LV + + D+ ++ A S +
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198
Query: 117 VRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDK--MRDAHLVFDRVLEKDVVLFTAL 174
H + G + V V + L+D YAK + + A +FD++++KD V + ++
Sbjct: 199 KGLTESIHSFVIKRGFD-RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKP-NEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
++ YAQSG+ EA EVFR +V +V N TL++ L + + G G+ IH +++ G
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFR 293
LE V TS++ MY +C VE + K F+++ + +WT+ + G +G A+ +F
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 294 EMIRCSVSPNPFTLSSILQACSSRAMREVGEQ-IHAITTKLGMEGNKDAGAALINLYGKC 352
MI V PN T S+L ACS + G + +A+ + G+E + +++L G+
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 353 GNVDKARSVFDVLTELDLVSVNSMIYA 379
G + KA +D++ + + +S+I++
Sbjct: 438 GFLQKA---YDLIQRMKM-KPDSIIWS 460
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 178/360 (49%), Gaps = 26/360 (7%)
Query: 159 VFDRVLEK-DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
+F+R ++K DV + ++IA A+SG EAL F M + P + + +C +L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVV 277
D +G+ H G +S + ++L+ MYS C +ED+ KVF+++ + V+WTS +
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 278 GLVQNGREEVAVSVFREMI------RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITT 331
G NG AVS+F++++ ++ + L S++ ACS + + E IH+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 332 KLGMEGNKDAGAALINLYGKCGN--VDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA 389
K G + G L++ Y K G V AR +FD + + D VS NS++ YAQ+G EA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 390 LQLFKR-IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREH----F 444
++F+R +K + N +T ++LLA +++G + G + ++ I + E
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI-----HDQVIRMGLEDDVIVG 325
Query: 445 TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG 504
T +ID+ + R E A + + N +V W ++ +HG K L+L P
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA-------KALELFPA 378
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 182/353 (51%), Gaps = 12/353 (3%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGS--VAEARKLFDEMP 62
S+I+ C+ + ++H+ VI GF + +G+ L+D Y K G VA ARK+FD++
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP-DAYTFSAIFKAFSELGLVRYGR 121
++ V++NS++S + G S +A E++ ++ V+ +A T S + A S G +R G+
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
H + +GLE DV V ++++DMY K ++ A FDR+ K+V +TA+IAGY
Sbjct: 308 CIHDQVIRMGLED-DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNG-QLIHGFIVKSGLESFVAS 240
G +ALE+F M+D V+PN T S LA+C + G V G + + + G+E +
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAY-ASHVTWTSFVVGL-VQNGREEVAVSVFREMIRC 298
++ + R ++ + + ++ + W+S + + E +SV R
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGK 351
S + + L S + A + R ++V E++ I G+ K G +L+ L G+
Sbjct: 487 SSNCGYYMLLSHIYADAGR-WKDV-ERVRMIMKNRGLV--KPPGFSLLELNGE 535
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
S+++ +H+ +L + +H VI G ++G +ID Y KCG V ARK FD M
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
+++ +W +MI+ + HG + +A+EL+ M+ GV P+ TF ++ A S GL G R
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW 410
Query: 124 HG-----LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV-LEKDVVLFTALIAG 177
V GLE +VD+ + ++ A+ + R+ ++ D +++++L+A
Sbjct: 411 FNAMKGRFGVEPGLEHY-----GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/673 (33%), Positives = 371/673 (55%), Gaps = 7/673 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
+ ++ C L + VH HV+ G+ + + + LI Y+KCG V AR LFD MP
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
R I++WN+MIS + +G + +EL+ M V PD T +++ A LG R GR
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H + G V D+ V ++L MY R+A +F R+ KD+V +T +I+GY +
Sbjct: 319 IHAYVITTGFAV-DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
L +A++ +R M VKP+E T+A+ L++C LGD G +H +K+ L S+V
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+L+ MYS+C ++ ++ +F+ + + ++WTS + GL N R A+ R+M + ++ P
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQP 496
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
N TL++ L AC+ G++IHA + G+ + AL+++Y +CG ++ A S F
Sbjct: 497 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF 556
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+ + D+ S N ++ Y++ G G ++LF R+ K + P+ +TFIS+L C+ + +V
Sbjct: 557 NSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVR 615
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNA 481
+G F+ M++ + + +H+ C++DLLGR+ +EA I ++ PD +W LLNA
Sbjct: 616 QGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Query: 482 CRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSP 541
CRIH +I++ E + + +L G +ILL NLYA GKW +V +++ +++ L
Sbjct: 675 CRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA 734
Query: 542 ARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKM 601
SWV+V +VH F++ D HP+ EI +L EK +G + + D E +
Sbjct: 735 GCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRD 794
Query: 602 SSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKR 661
HSE+ AIAF L T I + KNL +C +CH +KF++ R+I RD++
Sbjct: 795 EIFCGHSERKAIAFGLINTVP-GMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEH 853
Query: 662 FHHFKGGLCSCKD 674
FHHFK G CSC D
Sbjct: 854 FHHFKDGECSCGD 866
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 253/501 (50%), Gaps = 6/501 (1%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDE 60
+ + +L+ C ++ V++ +SS S + LG+ + +++ G++ +A +F +
Sbjct: 95 DVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGK 154
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNML-VEGVLPDAYTFSAIFKAFSELGLVRY 119
M ER++ +WN ++ + G +A+ LY ML V GV PD YTF + + + +
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G+ H V G E LD+ V +AL+ MY K ++ A L+FDR+ +D++ + A+I+GY
Sbjct: 215 GKEVHVHVVRYGYE-LDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
++G+ E LE+F M V P+ TL S +++C LGD G+ IH +++ +G ++
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
SL MY ++ K+F+++ V+WT+ + G N + A+ +R M + S
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
V P+ T++++L AC++ + G ++H + K + LIN+Y KC +DKA
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
+F + +++S S+I N +EAL +F R K+ L PN +T + L AC G
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIG 512
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
+ G ++ A + + L ++D+ R R A N DV W LL
Sbjct: 513 ALMCGKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILL 570
Query: 480 NACRIHGEIEMAEKIMRKVLQ 500
G+ M ++ ++++
Sbjct: 571 TGYSERGQGSMVVELFDRMVK 591
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 278 GLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAIT----TKL 333
GL NG+ E A+ + M V+ + ++++ C + +E G ++++I + L
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 334 GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLF 393
G+E G A + ++ + GN+ A VF ++E +L S N ++ YA+ G+ EA+ L+
Sbjct: 128 GVE----LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 394 KRIKKL-GLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLG 452
R+ + G+ P+ TF +L C + G ++ + + EL + +I +
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVV-RYGYELDIDVVNALITMYV 242
Query: 453 RSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
+ + A +L + + D++ W +++
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISG 271
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/642 (33%), Positives = 363/642 (56%), Gaps = 27/642 (4%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
L+ GY+K G + EARK+FD MPER++V+W +++ +V +GK A L+ M P+
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PE 138
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
S +G ++ GR + + D ++++ K ++ +A +F
Sbjct: 139 KNKVSWTVML---IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL---ASCGNLG 217
D + E+ V+ +T ++ GY Q+ +A ++F M ++ E + S L G +
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIE 251
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVV 277
D+ +L VK V + ++++ + + + +VF+ + + +W + +
Sbjct: 252 DA--EELFEVMPVKP-----VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIK 304
Query: 278 GLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEG 337
+NG E A+ +F M + V P TL SIL C+S A G+Q+HA + +
Sbjct: 305 IHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV 364
Query: 338 NKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK 397
+ + L+ +Y KCG + K++ +FD D++ NS+I YA +G G EAL++F +
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP 424
Query: 398 KLG-LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKR 456
G PN VTF++ L AC+ AG+VEEG +++ M++ ++ H+ CM+D+LGR+ R
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGR 484
Query: 457 FEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNL 515
F EA +I+ +T PD +W +LL ACR H ++++AE +K++++ P + GT+ILL+N+
Sbjct: 485 FNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNM 544
Query: 516 YASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDM-SHPRAHEIFDMLHE 574
YAS G+W V E++ ++ ++KSP SW +V+ +VH F G + SHP I +L E
Sbjct: 545 YASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDE 604
Query: 575 LIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLR 634
L + GY+PD + L D+ EE+K++SL YHSE+LA+A+AL K IR+ KNLR
Sbjct: 605 LDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKL-SEGIPIRVMKNLR 663
Query: 635 VCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
VC DCH+ IK ++ + R+II RD+ RFHHF+ G CSCKDYW
Sbjct: 664 VCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 221/498 (44%), Gaps = 98/498 (19%)
Query: 15 KSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMIS 74
KS LR ++ I + + H + G + EARKLFD + I +WNSM++
Sbjct: 2 KSQILLRRTYSTTIPPPTANVRITH-----LSRIGKIHEARKLFDSCDSKSISSWNSMVA 56
Query: 75 AHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV 134
+ ++ + A +L+ M ++ +++ + + + G + R+ L +
Sbjct: 57 GYFANLMPRDARKLFDEMPDRNII----SWNGLVSGYMKNGEIDEARKVFDL-----MPE 107
Query: 135 LDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM 194
+V +ALV Y K+ A +F ++ EK+ V +T ++ G+ Q G +A +++ EM
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EM 166
Query: 195 VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGF-----------IVKSGLESFVASQTS 243
+ P++ +A T +IHG I E V + T+
Sbjct: 167 I-----PDKDNIART-------------SMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
++T Y + + V+D+ K+F+ + + V+WTS ++G VQNGR E A +F M V P
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM---PVKP- 264
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
+ AC+ A+I+ G+ G + KAR VFD
Sbjct: 265 -------VIACN----------------------------AMISGLGQKGEIAKARRVFD 289
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
+ E + S ++I + +NGF EAL LF ++K G+ P T ISIL C + +
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 424 GCQLFAFMKNNHNIELTREHF-------TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWR 476
G Q+ A +L R F + ++ + + ++ ++ + + D+++W
Sbjct: 350 GKQVHA--------QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 477 TLLNACRIHGEIEMAEKI 494
++++ HG E A K+
Sbjct: 402 SIISGYASHGLGEEALKV 419
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 6/184 (3%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
S+++ CA SL + VHA ++ F + L+ YIKCG + +++ +FD P +
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLPDAYTFSAIFKAFSELGLVRYGRRA 123
I+ WNS+IS + SHG ++A++++ M + G P+ TF A A S G+V G +
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKI 455
Query: 124 H-GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV-LEKDVVLFTALI-AGYAQ 180
+ + V G++ + A +VDM + + +A + D + +E D ++ +L+ A
Sbjct: 456 YESMESVFGVKPITAHYA-CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Query: 181 SGLD 184
S LD
Sbjct: 515 SQLD 518
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/649 (34%), Positives = 360/649 (55%), Gaps = 73/649 (11%)
Query: 4 YSSLITQCAHTK-SLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEM 61
++ L+ C +K S +R VHA VI SGFS + ++LID Y KCGS+ + R++FD+M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 62 PERHI-------------------------------VTWNSMISAHVSHGKSKQAVELYG 90
P+R+I TWNSM+S H + ++A+ +
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 91 NMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKF 150
M EG + + Y+F+++ A S L + G + H L + + DV++ SALVDMY+K
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL-IAKSPFLSDVYIGSALVDMYSKC 200
Query: 151 DKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
+ DA VFD + +++VV + +LI + Q+G EAL+VF+ M++ RV+P+E TLAS +
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 211 ASCGNLGDSVNGQLIHGFIVKSG-LESFVASQTSLLTMYSRCSMVE------DSVKV--- 260
++C +L GQ +HG +VK+ L + + + + MY++CS ++ DS+ +
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 261 ----------------------FNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
F ++A + V+W + + G QNG E A+S+F + R
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGME---GNKD---AGAALINLYGKC 352
SV P ++ ++IL+AC+ A +G Q H K G + G +D G +LI++Y KC
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440
Query: 353 GNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISIL 412
G V++ VF + E D VS N+MI +AQNG+G EAL+LF+ + + G P+ +T I +L
Sbjct: 441 GCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVL 500
Query: 413 LACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPD 471
AC +AG VEEG F+ M + + R+H+TCM+DLLGR+ EEA +I E+ PD
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPD 560
Query: 472 VVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTT 531
V+W +LL AC++H I + + + K+L++ P + G ++LL+N+YA GKW V+ ++ +
Sbjct: 561 SVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKS 620
Query: 532 IRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAK 580
+R + K P SW+ + H FM D SHPR +I +L LI + +
Sbjct: 621 MRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/677 (32%), Positives = 376/677 (55%), Gaps = 9/677 (1%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPER 64
+++ CA + + + VH + L L + L+D Y KCG + A+ +F +
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLV--EGVLPDAYT-FSAIFKAFSELGLVRYGR 121
++V+WN+M+ + G + ++ ML E V D T +A+ F E L +
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL-K 415
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
H ++ V + VA+A V YAK + A VF + K V + ALI G+AQS
Sbjct: 416 ELHCYSLKQEF-VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
+L+ +M + P+ +T+ S L++C L G+ +HGFI+++ LE +
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
S+L++Y C + +F+ + S V+W + + G +QNG + A+ VFR+M+ +
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
++ + ACS +G + HA K +E + +LI++Y K G++ ++ V
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F+ L E S N+MI Y +G EA++LF+ +++ G P+ +TF+ +L ACN++GL+
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 714
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN--PDVVLWRTLL 479
EG + MK++ ++ +H+ C+ID+LGR+ + ++A ++ E + DV +W++LL
Sbjct: 715 HEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
++CRIH +EM EK+ K+ +L P ++LL+NLYA GKW V +++ + ++ L+K
Sbjct: 775 SSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRK 834
Query: 540 SPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEK 599
SW++++R+V +F+ G+ EI + L K +GY PDT V DL EE+
Sbjct: 835 DAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEE 894
Query: 600 KMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDS 659
K+ L HSEKLA+ + L KT TT IR++KNLR+C DCH+ K ++ + R+I+ RD+
Sbjct: 895 KIEQLRGHSEKLALTYGLIKTSEGTT-IRVYKNLRICVDCHNAAKLISKVMEREIVVRDN 953
Query: 660 KRFHHFKGGLCSCKDYW 676
KRFHHFK G+CSC DYW
Sbjct: 954 KRFHHFKNGVCSCGDYW 970
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 249/505 (49%), Gaps = 15/505 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y +I CA + AVH V+ +G +G+ L+ Y G V +A +LFD MP
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE----GVLPDAYTFSAIFKAFSELGLVR 118
ER++V+WNSMI +G S+++ L G M+ E +PD T + + +
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G+ HG AV L L+ ++ + +AL+DMY+K + +A ++F K+VV + ++ G+
Sbjct: 310 LGKGVHGWAVKLRLDK-ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 179 AQSGLDGEALEVFREMV--DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES 236
+ G +V R+M+ VK +E T+ + + C + + + +H + +K +
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK---QE 425
Query: 237 FVASQ---TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFR 293
FV ++ + + Y++C + + +VF+ + + +W + + G Q+ +++
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 294 EMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
+M + P+ FT+ S+L ACS +G+++H + +E + ++++LY CG
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 354 NVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
+ +++FD + + LVS N++I Y QNGF AL +F+++ G+ G++ + +
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 414 ACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVV 473
AC+ + G + A+ H +E +ID+ ++ +++ + N +
Sbjct: 606 ACSLLPSLRLGREAHAYAL-KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 664
Query: 474 LWRTLLNACRIHGEIEMAEKIMRKV 498
W ++ IHG + A K+ ++
Sbjct: 665 SWNAMIMGYGIHGLAKEAIKLFEEM 689
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 224/473 (47%), Gaps = 13/473 (2%)
Query: 36 LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNML-V 94
+L ++I Y CGS ++R +FD + +++ WN++IS++ + + +E + M+
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMR 154
+LPD +T+ + KA + + V G HGL V GL V DVFV +ALV Y +
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL-VEDVFVGNALVSFYGTHGFVT 239
Query: 155 DAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV----DRRVKPNEYTLASTL 210
DA +FD + E+++V + ++I ++ +G E+ + EM+ D P+ TL + L
Sbjct: 240 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 299
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
C + G+ +HG+ VK L+ + +L+ MYS+C + ++ +F + V
Sbjct: 300 PVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVV 359
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMIRC--SVSPNPFTLSSILQACSSRAMREVGEQIHA 328
+W + V G G V R+M+ V + T+ + + C + +++H
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 329 ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYE 388
+ K N+ A + Y KCG++ A+ VF + + S N++I +AQ+
Sbjct: 420 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 479
Query: 389 ALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT--C 446
+L ++K GL P+ T S+L AC+ + G ++ F+ N L R+ F
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW---LERDLFVYLS 536
Query: 447 MIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVL 499
++ L L + + + +V W T++ +G + A + R+++
Sbjct: 537 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 151/308 (49%), Gaps = 11/308 (3%)
Query: 117 VRYGRRAHGLAVVLGLEVL--DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTAL 174
+ GR+ H L V G L D + + ++ MYA D+ VFD + K++ + A+
Sbjct: 100 IEMGRKIHQL--VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157
Query: 175 IAGYAQSGLDGEALEVFREMVDRR-VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
I+ Y+++ L E LE F EM+ + P+ +T + +C + D G +HG +VK+G
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG 217
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFR 293
L V +L++ Y V D++++F+ + + V+W S + NG E + +
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 277
Query: 294 EMIR----CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLY 349
EM+ + P+ TL ++L C+ +G+ +H KL ++ AL+++Y
Sbjct: 278 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMY 337
Query: 350 GKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG--LAPNGVT 407
KCG + A+ +F + ++VS N+M+ ++ G + + +++ G + + VT
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 397
Query: 408 FISILLAC 415
++ + C
Sbjct: 398 ILNAVPVC 405
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 9/301 (2%)
Query: 206 LASTLASCGNLGDSVNGQLIHGFIVKSG-LESFVASQTSLLTMYSRCSMVEDSVKVFNQL 264
L L + G D G+ IH + S L + T ++TMY+ C +DS VF+ L
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 265 AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS-VSPNPFTLSSILQACSSRAMREVG 323
+ W + + +N + + F EMI + + P+ FT +++AC+ + +G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQN 383
+H + K G+ + G AL++ YG G V A +FD++ E +LVS NSMI ++ N
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 384 GFGYEALQLFKRIKKL----GLAPNGVTFISILLACNNAGLVEEGCQLFAF-MKNNHNIE 438
GF E+ L + + P+ T +++L C + G + + +K + E
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 439 LTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
L + ++D+ + A M+ N +VV W T++ G+ ++R++
Sbjct: 327 LVLNN--ALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 499 L 499
L
Sbjct: 385 L 385
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/617 (35%), Positives = 352/617 (57%), Gaps = 13/617 (2%)
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
++ N +I + GK KQA+ + L + P T+ + + R H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGE 186
+ G + D F+A+ L+ MY+ + A VFD+ ++ + ++ AL +G E
Sbjct: 103 ILDNGSD-QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 187 ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN----GQLIHGFIVKSGLESFVASQT 242
L ++ +M V+ + +T L +C +VN G+ IH + + G S V T
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS--V 300
+L+ MY+R V+ + VF + + V+W++ + +NG+ A+ FREM+R +
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
SPN T+ S+LQAC+S A E G+ IH + G++ +AL+ +YG+CG ++ +
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
VFD + + D+VS NS+I +Y +G+G +A+Q+F+ + G +P VTF+S+L AC++ GL
Sbjct: 342 VFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGL 401
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLL 479
VEEG +LF M +H I+ EH+ CM+DLLGR+ R +EAA ++ ++ T P +W +LL
Sbjct: 402 VEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
+CRIHG +E+AE+ R++ L P + G ++LL ++YA A W++V +K + L+K
Sbjct: 462 GSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK 521
Query: 540 SPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEK 599
P R W++V R++++F++ D +P +I L +L E K GY P T+ VL +L E+
Sbjct: 522 LPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEE 581
Query: 600 KMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDS 659
K + HSEKLA+AF L T + IRI KNLR+C DCH + KF++ ++I+ RD
Sbjct: 582 KERIVLGHSEKLALAFGLINT-SKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 640
Query: 660 KRFHHFKGGLCSCKDYW 676
RFH FK G+CSC DYW
Sbjct: 641 NRFHRFKNGVCSCGDYW 657
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 200/374 (53%), Gaps = 12/374 (3%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y LI C H SL+ VH H++ +G L KLI Y GSV ARK+FD+
Sbjct: 80 YELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTR 139
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKA--FSELGL--VR 118
+R I WN++ A G ++ + LY M GV D +T++ + KA SE + +
Sbjct: 140 KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLM 199
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G+ H G V++ + LVDMYA+F + A VF + ++VV ++A+IA Y
Sbjct: 200 KGKEIHAHLTRRGYSS-HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACY 258
Query: 179 AQSGLDGEALEVFREMVDRRVK---PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE 235
A++G EAL FREM+ R K PN T+ S L +C +L G+LIHG+I++ GL+
Sbjct: 259 AKNGKAFEALRTFREMM-RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 236 SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM 295
S + ++L+TMY RC +E +VF+++ V+W S + +G + A+ +F EM
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Query: 296 IRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLGMEGNKDAGAALINLYGKCGN 354
+ SP P T S+L ACS + E G+++ + G++ + A +++L G+
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANR 437
Query: 355 VDK-ARSVFDVLTE 367
+D+ A+ V D+ TE
Sbjct: 438 LDEAAKMVQDMRTE 451
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/714 (31%), Positives = 391/714 (54%), Gaps = 42/714 (5%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIK--CGSVAEARKLFDE 60
+ +++T C + +H ++ SGF + + + L+ Y K S + KLFDE
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDE 243
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNM-LVEGVLPDAYTFSAIFKAFSELGLVRY 119
+P+R + +WN+++S+ V GKS +A +L+ M VEG D++T S + + ++ ++
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLR 303
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFT------- 172
GR HG A+ +GL + ++ V +AL+ Y+KF M+ +++ ++ +D V FT
Sbjct: 304 GRELHGRAIRIGL-MQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 173 ------------------------ALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLAS 208
AL+AG+ ++G +AL++F +M+ R V+ +++L S
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTS 422
Query: 209 TLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA--Y 266
+ +CG + + + IHGF +K G QT+LL M +RC + D+ ++F+Q
Sbjct: 423 AVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 267 ASHVTWTSFVVGLVQNGREEVAVSVF-REMIRCSVSPNPFTLSSILQACSSRAMREVGEQ 325
S TS + G +NG + AVS+F R + + + +L+ IL C + RE+G Q
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGF 385
IH K G + G +LI++Y KC + D A +F+ + E D++S NS+I Y
Sbjct: 543 IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRN 602
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISILLAC--NNAGLVEEGCQLFAFMKNNHNIELTREH 443
G EAL L+ R+ + + P+ +T ++ A + + LF MK ++IE T EH
Sbjct: 603 GDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEH 662
Query: 444 FTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA 502
+T + +LG EEA IN + P+V + R LL++CRIH +A+++ + +L
Sbjct: 663 YTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTK 722
Query: 503 PGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSH 562
P +IL +N+Y+++G W++ ++ +R+ +K PA+SW+ + ++H+F A D SH
Sbjct: 723 PETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSH 782
Query: 563 PRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCG 622
P+ +I+ L LI + +GY P+T +VLQ++ E K S L++HS KLA+ + + +
Sbjct: 783 PQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNT 842
Query: 623 RTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
R +R+ KN+ +CGDCH + K+++++ R+I+ RDS FHHF G CSC+D W
Sbjct: 843 RGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 245/525 (46%), Gaps = 53/525 (10%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
FY L+ A + +AVHA + LG+ LI Y+K G EA +F +
Sbjct: 84 FY--LLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLPDAYTFSAIFKAFSELGLVRYGR 121
+V++ ++IS +A++++ M G V P+ YTF AI A + G
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAK--FDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
+ HGL V G + VFV+++L+ +Y K D +FD + ++DV + +++
Sbjct: 202 QIHGLIVKSGF-LNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV 260
Query: 180 QSGLDGEALEVFREMVDRRVKP---NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL-- 234
+ G +A ++F EM RV+ + +TL++ L+SC + + G+ +HG ++ GL
Sbjct: 261 KEGKSHKAFDLFYEM--NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 235 -------------------------ESFVASQ----TSLLTMYSRCSMVEDSVKVFNQLA 265
E +A T ++T Y MV+ +V++F +
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 266 YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQ 325
+ +T+ + + G +NG A+ +F +M++ V F+L+S + AC + ++V EQ
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQ 438
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL-TELDLV-SVNSMIYAYAQN 383
IH K G N AL+++ +C + A +FD + LD + S+I YA+N
Sbjct: 439 IHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARN 498
Query: 384 GFGYEALQLFKRI---KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF-MKNNHNIEL 439
G +A+ LF R +KL L + V+ IL C G E G Q+ + +K + ++
Sbjct: 499 GLPDKAVSLFHRTLCEQKLFL--DEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI 556
Query: 440 TREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRI 484
+ + +I + + ++A + N + DV+ W +L+ +C I
Sbjct: 557 SLGN--SLISMYAKCCDSDDAIKIFNTMREHDVISWNSLI-SCYI 598
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/539 (37%), Positives = 310/539 (57%), Gaps = 3/539 (0%)
Query: 140 ASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRV 199
++ L++ Y + + +A VFD + ++ + + A+IAG Q + E L +FREM
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 200 KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVK 259
P+EYTL S + L GQ IHG+ +K GLE + +SL MY R ++D
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 260 VFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAM 319
V + + V W + ++G QNG E + +++ M PN T ++L +CS A+
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 320 REVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYA 379
R G+QIHA K+G ++LI++Y KCG + A F + D V +SMI A
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 380 YAQNGFGYEALQLFKRI-KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIE 438
Y +G G EA++LF + ++ + N V F+++L AC+++GL ++G +LF M + +
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 439 LTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRK 497
+H+TC++DLLGR+ ++A +I + D+V+W+TLL+AC IH EMA+++ ++
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Query: 498 VLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMA 557
+LQ+ P D ++LL N++ASA +W V E++ ++RD +KK SW + EVH F
Sbjct: 388 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 447
Query: 558 GDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFAL 617
GD S ++ EI+ L EL + K GY PDT VL D+ EE+K S L HSEKLA+AFAL
Sbjct: 448 GDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFAL 507
Query: 618 WKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
IRI KNLRVC DCH K+++++ R+I RD RFHHF G CSC DYW
Sbjct: 508 M-ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 195/367 (53%), Gaps = 6/367 (1%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
LI+GY++ G + ARK+FDEMP+R + TWN+MI+ + +++ + L+ M G PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
YT ++F + L V G++ HG + GLE LD+ V S+L MY + K++D +V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE-LDLVVNSSLAHMYMRNGKLQDGEIVI 149
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
+ +++V + LI G AQ+G L +++ M +PN+ T + L+SC +L
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLV 280
GQ IH +K G S VA +SL++MYS+C + D+ K F++ V W+S +
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG 269
Query: 281 QNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVG-EQIHAITTKLGMEGN 338
+G+ + A+ +F M + ++ N ++L ACS +++ G E + K G +
Sbjct: 270 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 339 KDAGAALINLYGKCGNVDKARSVFDVLT-ELDLVSVNSMIYAYAQNGFGYEALQLFKRIK 397
+++L G+ G +D+A ++ + + D+V +++ A + A ++FK I
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI- 388
Query: 398 KLGLAPN 404
L + PN
Sbjct: 389 -LQIDPN 394
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 140/276 (50%), Gaps = 13/276 (4%)
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
LGD + ++G + K +++++S L+ Y R + ++ KVF+++ TW +
Sbjct: 7 LGDFPSAVAVYGRMRK---KNYMSSNI-LINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 62
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
+ GL+Q E +S+FREM SP+ +TL S+ + +G+QIH T K G+
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKR 395
E + ++L ++Y + G + V + +LV+ N++I AQNG L L+K
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 396 IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIEL----TREHFTCMIDLL 451
+K G PN +TF+++L +C++ + +G Q+ A I++ + +I +
Sbjct: 183 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHA-----EAIKIGASSVVAVVSSLISMY 237
Query: 452 GRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGE 487
+ +AA +E + D V+W ++++A HG+
Sbjct: 238 SKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ 273
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/525 (38%), Positives = 314/525 (59%), Gaps = 6/525 (1%)
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
A VFD + + + L+ L GY ++ L E+L ++++M D V+P+E+T + +
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
LGD G +H +VK G T L+ MY + + + +F + V W +F
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
+ VQ G +A+ F +M +V + FT+ S+L AC E+GE+I+ K +
Sbjct: 182 LAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEI 241
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKR 395
+ N A ++++ KCGN + AR +F+ + + ++VS ++MI YA NG EAL LF
Sbjct: 242 DCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTT 301
Query: 396 IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM--KNNHNIELTREHFTCMIDLLGR 453
++ GL PN VTF+ +L AC++AGLV EG + F+ M N+ N+E +EH+ CM+DLLGR
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGR 361
Query: 454 SKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILL 512
S EEA I ++ PD +W LL AC +H ++ + +K+ +++ AP G H+LL
Sbjct: 362 SGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLL 421
Query: 513 TNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
+N+YA+AGKW+ V ++++ +R L KK A S V+ + ++H F GD SHP++ I++ L
Sbjct: 422 SNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKL 481
Query: 573 HELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTT-AIRIFK 631
E+++K + +GY PDT V D+ E+K SL +HSEKLAIAF L K GR IR+ K
Sbjct: 482 DEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIK--GRPGHPIRVMK 539
Query: 632 NLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
NLR C DCH++ KFV+ LT +II RD RFHHF+ G+CSCK++W
Sbjct: 540 NLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 181/351 (51%), Gaps = 5/351 (1%)
Query: 12 AHTKSLTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWN 70
A + L+ +HA V+ +GFS L +L++ + G + AR++FDEM + I WN
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 71 SMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVL 130
++ +V + +++ LY M GV PD +T+ + KA S+LG G H V
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 131 GLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEV 190
G L + VA+ LV MY KF ++ A +F+ + KD+V + A +A Q+G ALE
Sbjct: 139 GFGCLGI-VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEY 197
Query: 191 FREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSR 250
F +M V+ + +T+ S L++CG LG G+ I+ K ++ + + + L M+ +
Sbjct: 198 FNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLK 257
Query: 251 CSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSI 310
C E + +F ++ + V+W++ +VG NG A+++F M + PN T +
Sbjct: 258 CGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGV 317
Query: 311 LQACSSRAMREVGEQIHAI---TTKLGMEGNKDAGAALINLYGKCGNVDKA 358
L ACS + G++ ++ + +E K+ A +++L G+ G +++A
Sbjct: 318 LSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 32/192 (16%)
Query: 42 IDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDA 101
+D ++KCG+ AR LF+EM +R++V+W++MI + +G S++A+ L+ M EG+ P+
Sbjct: 252 LDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNY 311
Query: 102 YTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFD 161
TF + A S GLV G+R L V D
Sbjct: 312 VTFLGVLSACSHAGLVNEGKRYFSLMVQSN-----------------------------D 342
Query: 162 RVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN 221
+ LE + ++ +SGL EA E ++M V+P+ + L +C D +
Sbjct: 343 KNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGACAVHRDMIL 399
Query: 222 GQLIHGFIVKSG 233
GQ + +V++
Sbjct: 400 GQKVADVLVETA 411
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/640 (32%), Positives = 358/640 (55%), Gaps = 24/640 (3%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
L+ GYIK + EAR +F+ MPER++V+W +M+ ++ G +A L+ M +
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----N 140
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
+++ +F + G + R+ + + + V DV ++ ++ + ++ +A L+F
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDM-----MPVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
D + E++VV +T +I GY Q+ ++V R++ + + E + S L LG ++
Sbjct: 196 DEMRERNVVTWTTMITGYRQNN----RVDVARKLFEVMPEKTEVSWTSML-----LGYTL 246
Query: 221 NGQL--IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVG 278
+G++ F ++ +A +++ + + + +VF+ + + TW +
Sbjct: 247 SGRIEDAEEFFEVMPMKPVIACN-AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 279 LVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGN 338
+ G E A+ +F +M + V P+ +L SIL C++ A + G Q+HA + + +
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD 365
Query: 339 KDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK 398
+ L+ +Y KCG + KA+ VFD + D++ NS+I YA +G G EAL++F +
Sbjct: 366 VYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS 425
Query: 399 LGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFE 458
G PN VT I+IL AC+ AG +EEG ++F M++ + T EH++C +D+LGR+ + +
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVD 485
Query: 459 EAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYA 517
+A LI +T PD +W LL AC+ H +++AE +K+ + P + GT++LL+++ A
Sbjct: 486 KAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545
Query: 518 SAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDM-SHPRAHEIFDMLHELI 576
S KW V ++ +R + K P SW++V ++VH F G + +HP I ML +
Sbjct: 546 SRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTD 605
Query: 577 EKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVC 636
+ GYSPD VL D+ EE+K+ SL HSE+LA+A+ L K IR+ KNLRVC
Sbjct: 606 GLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLK-LPEGVPIRVMKNLRVC 664
Query: 637 GDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
GDCH+ IK ++ +T R+II RD+ RFHHF G CSC+DYW
Sbjct: 665 GDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 192/449 (42%), Gaps = 90/449 (20%)
Query: 148 AKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRV-------- 199
++ K+ +A FD + K + + ++++GY +GL EA ++F EM +R V
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 200 -----------------KPNEYTLASTLASCGNLGDSVNGQ-----------------LI 225
P ++ T G + + + G+ ++
Sbjct: 88 GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVM 147
Query: 226 HGFIVKSG-------------LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
G ++ G ++ VAS T+++ R V+++ +F+++ + VTW
Sbjct: 148 FGGLIDDGRIDKARKLYDMMPVKDVVAS-TNMIGGLCREGRVDEARLIFDEMRERNVVTW 206
Query: 273 TSFVVGLVQNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITT 331
T+ + G QN R +VA +F M + VS L L S + + E +
Sbjct: 207 TTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTL----SGRIEDAEEFFEVMPM 262
Query: 332 KLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQ 391
K + N A+I +G+ G + KAR VFD++ + D + MI AY + GF EAL
Sbjct: 263 KPVIACN-----AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 392 LFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF------- 444
LF +++K G+ P+ + ISIL C ++ G Q+ A L R F
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA--------HLVRCQFDDDVYVA 369
Query: 445 TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG 504
+ ++ + + +A ++ + ++ D+++W ++++ HG E A KI ++ P
Sbjct: 370 SVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM----PS 425
Query: 505 DGG-----THILLTNLYASAGKWNQVIEM 528
G T I + + AGK + +E+
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
S+++ CA SL R VHAH++ F + L+ Y+KCG + +A+ +FD +
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK 395
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
I+ WNS+IS + SHG ++A++++ M G +P+ T AI A S G+
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS-----YAGKLEE 450
Query: 125 GLAVVLGLE-----VLDVFVASALVDMYAKFDKMRDA-HLVFDRVLEKDVVLFTALIAG 177
GL + +E V S VDM + ++ A L+ ++ D ++ AL+
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGA 509
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/612 (34%), Positives = 332/612 (54%), Gaps = 11/612 (1%)
Query: 68 TWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLA 127
WN + +++ LY +ML G PDA++F I K+ + L L G++ H
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 128 VVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKD--VVLFTALIAGYAQSGLDG 185
G E + FV +AL+ MY K + DA VF+ + V + ALI+GY +
Sbjct: 80 TKGGCET-EPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
+A +FR M + V + T+ + C G+ +HG VK GL+S VA S +
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
TMY +C VE ++F+++ +TW + + G QNG + ++ +M V P+PF
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
TL S+L +C+ +++G ++ + G N A I++Y +CGN+ KAR+VFD++
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 366 TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGC 425
LVS +MI Y +G G L LF + K G+ P+G F+ +L AC+++GL ++G
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 426 QLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRI 484
+LF MK + +E EH++C++DLLGR+ R +EA I + PD +W LL AC+I
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 485 HGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARS 544
H ++MAE KV++ P + G ++L++N+Y+ + + ++ +R+ +K P S
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Query: 545 WVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSL 604
+V+ VH F+AGD SH + E+ ML EL L + D D EE S+
Sbjct: 499 YVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDC-----DRGEEVS-STT 552
Query: 605 YYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHH 664
HSE+LAIAF + + T I + KNLRVC DCH ++K V+ + R + RD+ RFH+
Sbjct: 553 REHSERLAIAFGILNSI-PGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHY 611
Query: 665 FKGGLCSCKDYW 676
FK G+CSCKDYW
Sbjct: 612 FKDGVCSCKDYW 623
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ ++ CA + + +H HV G + + LI Y KCG VA+ARK+F+E P
Sbjct: 56 FPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENP 115
Query: 63 E--RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ + V +N++IS + ++ K A ++ M GV D+ T + + + G
Sbjct: 116 QSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLG 175
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
R HG V GL+ +V V ++ + MY K + +FD + K ++ + A+I+GY+Q
Sbjct: 176 RSLHGQCVKGGLDS-EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
+GL + LE++ +M V P+ +TL S L+SC +LG G + + +G V
Sbjct: 235 NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFV 294
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+ ++MY+RC + + VF+ + S V+WT+ + +G E+ + +F +MI+ +
Sbjct: 295 SNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI 354
Query: 301 SPNPFTLSSILQACSSRAMREVG-EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
P+ +L ACS + + G E A+ + +E + + L++L G+ G +D+A
Sbjct: 355 RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEA 413
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 3/261 (1%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
L+ C + L R++H + G S + + I Y+KCGSV R+LFDEMP +
Sbjct: 162 LVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG 221
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
++TWN++IS + +G + +ELY M GV PD +T ++ + + LG + G
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG 185
L G V +VFV++A + MYA+ + A VFD + K +V +TA+I Y G+
Sbjct: 282 LVESNGF-VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGE 340
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNG-QLIHGFIVKSGLESFVASQTSL 244
L +F +M+ R ++P+ L++C + G + G +L + LE + L
Sbjct: 341 IGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCL 400
Query: 245 LTMYSRCSMVEDSVKVFNQLA 265
+ + R ++++++ +
Sbjct: 401 VDLLGRAGRLDEAMEFIESMP 421
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/463 (39%), Positives = 287/463 (61%), Gaps = 3/463 (0%)
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
+ D G+ IH +++SG S + Q SLL +Y+ C V + KVF+++ V W S
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
+ G +NG+ E A++++ EM + P+ FT+ S+L AC+ +G+++H K+G+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKR 395
N + L++LY +CG V++A+++FD + + + VS S+I A NGFG EA++LFK
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 396 IKKL-GLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRS 454
++ GL P +TF+ IL AC++ G+V+EG + F M+ + IE EHF CM+DLL R+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 455 KRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLT 513
+ ++A I + P+VV+WRTLL AC +HG+ ++AE ++LQL P G ++LL+
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 514 NLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLH 573
N+YAS +W+ V +++ + +KK P S V+V VH F+ GD SHP++ I+ L
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 360
Query: 574 ELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNL 633
E+ + ++ GY P V D+ EE+K +++ YHSEK+AIAF L T R + I + KNL
Sbjct: 361 EMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPER-SPITVVKNL 419
Query: 634 RVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
RVC DCH IK V+ + R+I+ RD RFHHFK G CSC+DYW
Sbjct: 420 RVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 156/291 (53%), Gaps = 6/291 (2%)
Query: 117 VRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIA 176
VR G H + + G L ++V ++L+ +YA + A+ VFD++ EKD+V + ++I
Sbjct: 4 VRLGETIHSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 177 GYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES 236
G+A++G EAL ++ EM + +KP+ +T+ S L++C +G G+ +H +++K GL
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI 296
+ S LL +Y+RC VE++ +F+++ + V+WTS +VGL NG + A+ +F+ M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 297 RCS-VSPNPFTLSSILQACSSRAMREVG-EQIHAITTKLGMEGNKDAGAALINLYGKCGN 354
+ P T IL ACS M + G E + + +E + +++L + G
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 355 VDKARSVFDVLT-ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPN 404
V KA + + ++V +++ A +G L F RI+ L L PN
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS--DLAEFARIQILQLEPN 291
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 125/217 (57%), Gaps = 14/217 (6%)
Query: 23 VHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
+H+ VI SGF S + + L+ Y CG VA A K+FD+MPE+ +V WNS+I+ +GK
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 82 SKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVAS 141
++A+ LY M +G+ PD +T ++ A +++G + G+R H + +GL ++ ++
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL-TRNLHSSN 128
Query: 142 ALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR-VK 200
L+D+YA+ ++ +A +FD +++K+ V +T+LI G A +G EA+E+F+ M +
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 188
Query: 201 PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF 237
P E T L +C + G +VK G E F
Sbjct: 189 PCEITFVGILYACSHCG-----------MVKEGFEYF 214
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMPER 64
SL++ CA +LT + VH ++I G + L L+D Y +CG V EA+ LFDEM ++
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 153
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNM-LVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
+ V+W S+I +G K+A+EL+ M EG+LP TF I A S G+V+ G
Sbjct: 154 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG--- 210
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
+ F +MR+ + + R+ F ++ A++G
Sbjct: 211 -----------------------FEYFRRMREEYKIEPRIEH-----FGCMVDLLARAGQ 242
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
+A E + M ++PN + L +C GDS
Sbjct: 243 VKKAYEYIKSM---PMQPNVVIWRTLLGACTVHGDS 275
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/681 (32%), Positives = 375/681 (55%), Gaps = 17/681 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y +I A SL + +HA VI GF S + + LI Y+K G +A K+F+EMP
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER IV+WNSMIS +++ G ++ L+ ML G PD ++ + A S + + G+
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H AV +E DV V ++++DMY+K+ ++ A +F+ ++++++V + +I YA++G
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 183 LDGEALEVFREMVDRR-VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
+A F++M ++ ++P+ T + L + L G+ IHG+ ++ G + +
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLE 368
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
T+L+ MY C ++ + +F+++A + ++W S + VQNG+ A+ +F+E+ S+
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
P+ T++SIL A + G +IHA K N +L+++Y CG+++ AR
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F+ + D+VS NS+I AYA +GFG ++ LF + + PN TF S+L AC+ +G+V
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLN 480
+EG + F MK + I+ EH+ CM+DL+GR+ F A + E+ P +W +LLN
Sbjct: 549 DEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLN 608
Query: 481 ACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKS 540
A R H +I +AE ++ ++ + G ++LL N+YA AG+W V +K + + ++
Sbjct: 609 ASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRT 668
Query: 541 PARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEE-- 598
+RS V+ + H F GD SH ++I+++L + ++ +G + L E
Sbjct: 669 SSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVV---SRMVGEEDIYVHCVSRLRPETL 725
Query: 599 --KKMSSLYYHSEKLAIAFALWKT-CGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDII 655
+ +S HS +LA F L T GR +R N R+C CH +++ + LT R+I+
Sbjct: 726 VKSRSNSPRRHSVRLATCFGLISTETGRRVTVR--NNTRICRKCHEFLEKASRLTRREIV 783
Query: 656 ARDSKRFHHFKGGLCSCKDYW 676
DSK FHHF G CSC +YW
Sbjct: 784 VGDSKIFHHFSNGRCSCGNYW 804
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 230/449 (51%), Gaps = 8/449 (1%)
Query: 40 KLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP 99
+ + G+ + +A +LFDEM + WN MI S G +AV+ Y M+ GV
Sbjct: 69 RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKA 128
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
D +T+ + K+ + + + G++ H + + LG V DV+V ++L+ +Y K DA V
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF-VSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
F+ + E+D+V + ++I+GY G +L +F+EM+ KP+ ++ S L +C ++
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 220 VNGQLIHGFIVKSGLESF-VASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVG 278
G+ IH V+S +E+ V TS+L MYS+ V + ++FN + + V W +
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 279 LVQNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEG 337
+NGR A F++M + + P+ T ++L A A+ E G IH + G
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILE-GRTIHGYAMRRGFLP 363
Query: 338 NKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK 397
+ ALI++YG+CG + A +FD + E +++S NS+I AY QNG Y AL+LF+ +
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 398 KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRF 457
L P+ T SIL A + + EG ++ A++ + T ++ +
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI-ILNSLVHMYAMCGDL 482
Query: 458 EEAAMLINEVTNPDVVLWRTLLNACRIHG 486
E+A N + DVV W +++ A +HG
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%)
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
T L ++ ++ED++++F+++ A W + G G AV + M+ V
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
+ FT ++++ + + E G++IHA+ KLG + +LI+LY K G A V
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F+ + E D+VS NSMI Y G G+ +L LFK + K G P+ + +S L AC++
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
+ G ++ + T ++D+ + A + N + ++V W ++
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 482 CRIHGEI 488
+G +
Sbjct: 308 YARNGRV 314
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 335/577 (58%), Gaps = 7/577 (1%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
S++++ C+ L + +HAH++ G L + LID Y+KCG V A KLF+ MP
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
++I++W +++S + + K+A+EL+ +M G+ PD Y S+I + + L + +G +
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H + L D +V ++L+DMYAK D + DA VFD DVVLF A+I GY++ G
Sbjct: 373 HAYTIKANLGN-DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 184 DGE---ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
E AL +FR+M R ++P+ T S L + +L + IHG + K GL + +
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
++L+ +YS C ++DS VF+++ V W S G VQ E A+++F E+
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
P+ FT ++++ A + A ++G++ H K G+E N AL+++Y KCG+ + A
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
FD D+V NS+I +YA +G G +ALQ+ +++ G+ PN +TF+ +L AC++AGL
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGL 671
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLL 479
VE+G + F M IE EH+ CM+ LLGR+ R +A LI ++ T P ++WR+LL
Sbjct: 672 VEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLL 730
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
+ C G +E+AE + P D G+ +L+N+YAS G W + +++ ++ + K
Sbjct: 731 SGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVK 790
Query: 540 SPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELI 576
P RSW+ +++EVH F++ D SH +A++I+++L +L+
Sbjct: 791 EPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 249/479 (51%), Gaps = 15/479 (3%)
Query: 23 VHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
VH +I G L + LI+ Y + G + ARK+F++MPER++V+W++M+SA HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 82 SKQAVELYGNML-VEGVLPDAYTFSAIFKAFSELGLVRYGR----RAHGLAVVLGLEVLD 136
++++ ++ P+ Y S+ +A S GL GR + V G + D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFD-RD 182
Query: 137 VFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVD 196
V+V + L+D Y K + A LVFD + EK V +T +I+G + G +L++F ++++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 197 RRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED 256
V P+ Y L++ L++C L G+ IH I++ GLE + L+ Y +C V
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 257 SVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSS 316
+ K+FN + + ++WT+ + G QN + A+ +F M + + P+ + SSIL +C+S
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 317 RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSM 376
G Q+HA T K + + +LI++Y KC + AR VFD+ D+V N+M
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 377 IYAYAQNGFGY---EALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM-K 432
I Y++ G + EAL +F+ ++ + P+ +TF+S+L A + + Q+ M K
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 433 NNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMA 491
N+++ + +ID+ +++ ++ +E+ D+V+W ++ E E A
Sbjct: 483 YGLNLDIFAG--SALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 211/399 (52%), Gaps = 14/399 (3%)
Query: 104 FSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV 163
F+ + + + L+ Y HG +V GLE LD ++++ L+++Y++ M A VF+++
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLE-LDTYLSNILINLYSRAGGMVYARKVFEKM 105
Query: 164 LEKDVVLFTALIAGYAQSGLDGEALEVFREMV-DRRVKPNEYTLASTLASCGNL---GDS 219
E+++V ++ +++ G+ E+L VF E R+ PNEY L+S + +C L G
Sbjct: 106 PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW 165
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
+ QL F+VKSG + V T L+ Y + ++ + VF+ L S VTWT+ + G
Sbjct: 166 MVFQL-QSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 280 VQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNK 339
V+ GR V++ +F +++ +V P+ + LS++L ACS E G+QIHA + G+E +
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 340 DAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKL 399
LI+ Y KCG V A +F+ + +++S +++ Y QN EA++LF + K
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 400 GLAPNGVTFISILLACNNAGLVEEGCQLFAF-MKNNHNIELTREHF--TCMIDLLGRSKR 456
GL P+ SIL +C + + G Q+ A+ +K N L + + +ID+ +
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN----LGNDSYVTNSLIDMYAKCDC 400
Query: 457 FEEAAMLINEVTNPDVVLWRTLLNA-CRIHGEIEMAEKI 494
+A + + DVVL+ ++ R+ + E+ E +
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEAL 439
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/622 (33%), Positives = 347/622 (55%), Gaps = 8/622 (1%)
Query: 58 FDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLV 117
F P +++ IS S+G+ ++A+ M + G + + A+ A + +
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 118 RYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAG 177
R G+R H ++ + ++ + L+ Y K D + DA V D + EK+VV +TA+I+
Sbjct: 69 RDGQRVHA-HMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF 237
Y+Q+G EAL VF EM+ KPNE+T A+ L SC G+ IHG IVK +S
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 238 VASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR 297
+ +SLL MY++ ++++ ++F L V+ T+ + G Q G +E A+ +F +
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS 247
Query: 298 CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDK 357
+SPN T +S+L A S A+ + G+Q H + + +LI++Y KCGN+
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 307
Query: 358 ARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK-KLGLAPNGVTFISILLACN 416
AR +FD + E +S N+M+ Y+++G G E L+LF+ ++ + + P+ VT +++L C+
Sbjct: 308 ARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Query: 417 NAGLVEEGCQLFAFM-KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVL 474
+ + + G +F M + + EH+ C++D+LGR+ R +EA I + + P +
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 427
Query: 475 WRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRD 534
+LL ACR+H +++ E + R+++++ P + G +++L+NLYASAG+W V ++ +
Sbjct: 428 LGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQ 487
Query: 535 LKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQD 594
+ K P RSW+ ++ +H F A D +HPR E+ + E+ K K GY PD VL D
Sbjct: 488 KAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYD 547
Query: 595 LHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDI 654
+ EE+K L HSEKLA+ F L T G IR+FKNLR+C DCH++ K + + R++
Sbjct: 548 VDEEQKEKMLLGHSEKLALTFGLIAT-GEGIPIRVFKNLRICVDCHNFAKIFSKVFEREV 606
Query: 655 IARDSKRFHHFKGGLCSCKDYW 676
RD RFH G+CSC DYW
Sbjct: 607 SLRDKNRFHQIVDGICSCGDYW 628
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 197/359 (54%), Gaps = 5/359 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y +L+ C ++L + VHAH+I + + L +L+ Y KC + +ARK+ DEMP
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
E+++V+W +MIS + G S +A+ ++ M+ P+ +TF+ + + + G++
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
HGL V + +FV S+L+DMYAK ++++A +F+ + E+DVV TA+IAGYAQ G
Sbjct: 175 IHGLIVKWNYDS-HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
LD EALE+F + + PN T AS L + L +G+ H +++ L + Q
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI-RCSVS 301
SL+ MYS+C + + ++F+ + + ++W + +VG ++G + +FR M V
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 302 PNPFTLSSILQACSSRAMREVGEQIH--AITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
P+ TL ++L CS M + G I + + G + + ++++ G+ G +D+A
Sbjct: 354 PDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 174/367 (47%), Gaps = 45/367 (12%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+++++T C L + +H ++ + S+ +G L+D Y K G + EAR++F+ +P
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER +V+ ++I+ + G ++A+E++ + EG+ P+ T++++ A S L L+ +G++
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
AH + L V + ++L+DMY+K + A +FD + E+ + + A++ GY++ G
Sbjct: 276 AHCHVLRRELPFYAV-LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 183 LDGEALEVFREMVD-RRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF---V 238
L E LE+FR M D +RVKP+ TL + L+ C HG + +GL F V
Sbjct: 335 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS-----------HGRMEDTGLNIFDGMV 383
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
A + Y E + + L A + F + R
Sbjct: 384 AGE------YGTKPGTEHYGCIVDMLGRAGRID------------------EAFEFIKRM 419
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLY---GKCGNV 355
P L S+L AC ++GE + ++ E N L NLY G+ +V
Sbjct: 420 PSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE-NAGNYVILSNLYASAGRWADV 478
Query: 356 DKARSVF 362
+ R++
Sbjct: 479 NNVRAMM 485
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/529 (37%), Positives = 307/529 (58%), Gaps = 15/529 (2%)
Query: 157 HLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNL 216
HL+F V D LF ++I ++ L + +R M+ V P+ YT S + SC +L
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADL 120
Query: 217 GDSVNGQLIHGFIVKSG--LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTS 274
G+ +H V SG L+++V Q +L+T YS+C +E + +VF+++ S V W S
Sbjct: 121 SALRIGKGVHCHAVVSGFGLDTYV--QAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNS 178
Query: 275 FVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG 334
V G QNG + A+ VF +M P+ T S+L AC+ +G +H G
Sbjct: 179 LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFK 394
++ N G ALINLY +CG+V KAR VFD + E ++ + +MI AY +G+G +A++LF
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 395 RIK-KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
+++ G PN VTF+++L AC +AGLVEEG ++ M ++ + EH CM+D+LGR
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGR 358
Query: 454 SKRFEEAAMLINEV------TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGG 507
+ +EA I+++ T P LW +L AC++H ++ +I ++++ L P + G
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAP--ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPG 416
Query: 508 THILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHE 567
H++L+N+YA +GK ++V ++ + L+K S ++V+ + + F GD SH E
Sbjct: 417 HHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGE 476
Query: 568 IFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAI 627
I+ L LI + K +GY+P + V+ + EE+K +L YHSEKLA+AF L KT AI
Sbjct: 477 IYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTV--DVAI 534
Query: 628 RIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
I KNLR+C DCHS K++++++ R I RD RFHHF+ G CSC DYW
Sbjct: 535 TIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 186/358 (51%), Gaps = 17/358 (4%)
Query: 20 LRAVHAHVISSGF--SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHV 77
L+ VHAH+I +G+ S LL KLI ++A LF +P +NS+I +
Sbjct: 25 LQQVHAHLIVTGYGRSRSLLT-KLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS 83
Query: 78 SHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDV 137
V Y ML V P YTF+++ K+ ++L +R G+ H AVV G LD
Sbjct: 84 KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG-LDT 142
Query: 138 FVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR 197
+V +ALV Y+K M A VFDR+ EK +V + +L++G+ Q+GL EA++VF +M +
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRES 202
Query: 198 RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDS 257
+P+ T S L++C G G +H +I+ GL+ V T+L+ +YSRC V +
Sbjct: 203 GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKA 262
Query: 258 VKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM-IRCSVSPNPFTLSSILQACSS 316
+VF+++ + WT+ + +G + AV +F +M C PN T ++L AC+
Sbjct: 263 REVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAH 322
Query: 317 RAMREVGEQIHAITTK-----LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELD 369
+ E G ++ TK G+E + ++++ G+ G +D+A + + +LD
Sbjct: 323 AGLVEEGRSVYKRMTKSYRLIPGVEHH----VCMVDMLGRAGFLDEA---YKFIHQLD 373
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 161/309 (52%), Gaps = 11/309 (3%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
++S+I CA +L + VH H + SGF + L+ Y KCG + AR++FD MP
Sbjct: 110 FTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP 169
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
E+ IV WNS++S +G + +A++++ M G PD+ TF ++ A ++ G V G
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H + GL+ L+V + +AL+++Y++ + A VFD++ E +V +TA+I+ Y G
Sbjct: 230 VHQYIISEGLD-LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHG 288
Query: 183 LDGEALEVFREMVDR-RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKS-GLESFVAS 240
+A+E+F +M D PN T + L++C + G G+ ++ + KS L V
Sbjct: 289 YGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEH 348
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVT----WTSFVVGLVQNGREEVAVSVFREMI 296
++ M R ++++ K +QL T WT+ + + ++ V + + +I
Sbjct: 349 HVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI 408
Query: 297 RCSVSP-NP 304
++ P NP
Sbjct: 409 --ALEPDNP 415
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/625 (34%), Positives = 341/625 (54%), Gaps = 59/625 (9%)
Query: 107 IFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFD-KMRD---AHLVFDR 162
+F + +R + H + + G ++ D A+ ++ A D RD AH +F++
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSG-QMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQ 84
Query: 163 VLEKDVVLFTALIAGYAQSGLDGE--ALEVFREMV-DRRVKPNEYTLASTLASCGNLGDS 219
+ +++ + +I G+++S D A+ +F EM+ D V+PN +T S L +C G
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 220 VNGQLIHGFIVKSGL--ESFVASQTSLLTMYSRCSMVEDSV------------------- 258
G+ IHG +K G + FV S +L+ MY C ++D+
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMS--NLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 259 --------------------------KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVF 292
+F+++ S V+W + + G NG + AV VF
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 293 REMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKC 352
REM + + PN TL S+L A S E+GE +H G+ + G+ALI++Y KC
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 353 GNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISIL 412
G ++KA VF+ L ++++ ++MI +A +G +A+ F ++++ G+ P+ V +I++L
Sbjct: 323 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 382
Query: 413 LACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAA-MLINEVTNPD 471
AC++ GLVEEG + F+ M + +E EH+ CM+DLLGRS +EA ++N PD
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 442
Query: 472 VVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTT 531
V+W+ LL ACR+ G +EM +++ ++ + P D G ++ L+N+YAS G W++V EM+
Sbjct: 443 DVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 502
Query: 532 IRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFV 591
+++ ++K P S +D+D +H F+ D SHP+A EI ML E+ +K + GY P T V
Sbjct: 503 MKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQV 562
Query: 592 LQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTG 651
L +L EE K + L+YHSEK+A AF L T IRI KNLR+C DCHS IK ++ +
Sbjct: 563 LLNLEEEDKENVLHYHSEKIATAFGLIST-SPGKPIRIVKNLRICEDCHSSIKLISKVYK 621
Query: 652 RDIIARDSKRFHHFKGGLCSCKDYW 676
R I RD KRFHHF+ G CSC DYW
Sbjct: 622 RKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 195/415 (46%), Gaps = 73/415 (17%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSG-----------FSYCL---LGHKLIDGYIKCGSVA 52
L Q + +++ L +HA I SG +C L H+ +D
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLD--------- 76
Query: 53 EARKLFDEMPERHIVTWNSMISAHVSHGKSKQ--AVELYGNMLV-EGVLPDAYTFSAIFK 109
A K+F++MP+R+ +WN++I + K A+ L+ M+ E V P+ +TF ++ K
Sbjct: 77 YAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLK 136
Query: 110 AFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF-DRVLEKDV 168
A ++ G ++ G++ HGLA+ G D FV S LV MY M+DA ++F ++EKD+
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGG-DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 169 VLFT--------------------------------------------ALIAGYAQSGLD 184
V+ T +I+GY+ +G
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSL 244
+A+EVFREM ++PN TL S L + LG G+ +H + SG+ ++L
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 315
Query: 245 LTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNP 304
+ MYS+C ++E ++ VF +L + +TW++ + G +G+ A+ F +M + V P+
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 305 FTLSSILQACSSRAMREVGEQIHAITTKL-GMEGNKDAGAALINLYGKCGNVDKA 358
++L ACS + E G + + + G+E + +++L G+ G +D+A
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 135/258 (52%), Gaps = 3/258 (1%)
Query: 36 LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE 95
+L + +IDGY++ G AR LFD+M +R +V+WN+MIS + +G K AVE++ M
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
+ P+ T ++ A S LG + G H A G+ + DV + SAL+DMY+K +
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSKCGIIEK 327
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
A VF+R+ ++V+ ++A+I G+A G G+A++ F +M V+P++ + L +C +
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 216 LGDSVNGQLIHGFIVK-SGLESFVASQTSLLTMYSRCSMVEDSVK-VFNQLAYASHVTWT 273
G G+ +V GLE + ++ + R +++++ + + N V W
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 274 SFVVGLVQNGREEVAVSV 291
+ + G E+ V
Sbjct: 448 ALLGACRMQGNVEMGKRV 465
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 336/558 (60%), Gaps = 4/558 (0%)
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G + HG V GL ++ + VA+ L++ Y+K D+ F+ +K ++++I+ +A
Sbjct: 34 GLQLHGYVVKSGLSLIPL-VANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFA 92
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
Q+ L +LE ++M+ ++P+++ L S SC L G+ +H +K+G ++ V
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
+SL+ MY++C + + K+F+++ + VTW+ + G Q G E A+ +F+E + +
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
++ N ++ SS++ C++ + E+G QIH ++ K + + G++L++LY KCG + A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
VF+ + +L N+M+ AYAQ+ + ++LFKR+K G+ PN +TF+++L AC++AG
Sbjct: 273 QVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLI-NEVTNPDVVLWRTL 478
LV+EG F MK + IE T +H+ ++D+LGR+ R +EA +I N +P +W L
Sbjct: 333 LVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Query: 479 LNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLK 538
L +C +H E+A KV +L P G HI L+N YA+ G++ + + +RD K
Sbjct: 392 LTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEK 451
Query: 539 KSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEE 598
K SWV+ +VHTF AG+ H ++ EI++ L EL E+ + GY DT +VL+++ +
Sbjct: 452 KETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGD 511
Query: 599 KKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARD 658
+K ++ YHSE+LAIAF L T IR+ KNLRVCGDCH+ IKF+++ T R II RD
Sbjct: 512 EKNQTIRYHSERLAIAFGLI-TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRD 570
Query: 659 SKRFHHFKGGLCSCKDYW 676
+ RFH F+ G CSC DYW
Sbjct: 571 NNRFHRFEDGKCSCNDYW 588
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 194/376 (51%), Gaps = 5/376 (1%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGFSYC-LLGHKLIDGYIKCGSVAEARKLFDE 60
N L+ A T+S +H +V+ SG S L+ + LI+ Y K ++R+ F++
Sbjct: 16 NQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFED 75
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
P++ TW+S+IS + ++E M+ + PD + + K+ + L G
Sbjct: 76 SPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIG 135
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
R H L++ G + DVFV S+LVDMYAK ++ A +FD + +++VV ++ ++ GYAQ
Sbjct: 136 RSVHCLSMKTGYDA-DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQ 194
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
G + EAL +F+E + + N+Y+ +S ++ C N G+ IHG +KS +S
Sbjct: 195 MGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFV 254
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+SL+++YS+C + E + +VFN++ + W + + Q+ + + +F+ M +
Sbjct: 255 GSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM 314
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
PN T ++L ACS + + G + +E A+L+++ G+ G + +A
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEA-- 372
Query: 361 VFDVLTELDLVSVNSM 376
+V+T + + S+
Sbjct: 373 -LEVITNMPIDPTESV 387
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 148/297 (49%), Gaps = 1/297 (0%)
Query: 202 NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF 261
N + L S ++ G +HG++VKSGL +L+ YS+ + DS + F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 262 NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
S TW+S + QN +++ ++M+ ++ P+ L S ++C+ + +
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 322 VGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYA 381
+G +H ++ K G + + G++L+++Y KCG + AR +FD + + ++V+ + M+Y YA
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 382 QNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTR 441
Q G EAL LFK LA N +F S++ C N+ L+E G Q+ + + + +
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSS 252
Query: 442 EHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
+ ++ L + E A + NEV ++ +W +L A H + ++ +++
Sbjct: 253 FVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/699 (32%), Positives = 374/699 (53%), Gaps = 41/699 (5%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY---CLLGHKLIDGYIKCGSVAEARKLFDE 60
Y++L CA ++L +H H++S + Y +L + LI+ Y KCG++ AR++FD
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY- 119
MPER++V+W ++I+ +V G ++ L+ +ML P+ +T S++ + RY
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSSVLTS------CRYE 174
Query: 120 -GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDK---MRDAHLVFDRVLEKDVVLFTALI 175
G++ HGLA+ LGL ++VA+A++ MY + +A VF+ + K++V + ++I
Sbjct: 175 PGKQVHGLALKLGLHC-SIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMI 233
Query: 176 AGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQL------IHGFI 229
A + L +A+ VF M V + TL + +S D V ++ +H
Sbjct: 234 AAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLT 293
Query: 230 VKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH----VTWTSFVVGLVQNGRE 285
VKSGL + T+L+ +YS M+ED + SH V W + E
Sbjct: 294 VKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE 351
Query: 286 EVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAAL 345
A+ +F ++ + +SP+ +T SS+L+AC+ IHA K G + +L
Sbjct: 352 R-AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 346 INLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNG 405
I+ Y KCG++D VFD + D+VS NSM+ AY+ +G L +F+ K+ + P+
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQ---KMDINPDS 467
Query: 406 VTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLIN 465
TFI++L AC++AG VEEG ++F M H+ C+ID+L R++RF EA +I
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 466 EVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA-PGDGGTHILLTNLYASAGKWN 523
++ +PD V+W LL +CR HG + + K+ +L P + ++I ++N+Y + G +N
Sbjct: 528 QMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFN 587
Query: 524 QVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLG 583
+ + +++K P SW ++ +VH F +G P ++ L LI K +G
Sbjct: 588 EANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMG 647
Query: 584 YSPDTRFV-LQDLHEEKKMSSLYYHSEKLAIAFALWK-----TCGRTTAIRIFKNLRVCG 637
Y P+ R EE++ +L +HSEKLA+AFA+ + CG I+I KN R+C
Sbjct: 648 YVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCG-VNLIQIMKNTRICI 706
Query: 638 DCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
DCH+++K + L G++I+ RDS RFHHFK CSC DYW
Sbjct: 707 DCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 212/624 (33%), Positives = 350/624 (56%), Gaps = 31/624 (4%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDE 60
+ Y+S++ CA L +HAH + S F+ ++ +D Y KC ++ +A+ LFD
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ ++N+MI+ + +A+ L+ ++ G+ D + S +F+A + + + G
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
+ +GLA+ L LDV VA+A +DMY K + +A VFD + +D V + A+IA + Q
Sbjct: 402 LQIYGLAIKSSLS-LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASC--GNLGDSVNGQLIHGFIVKSGLESFV 238
+G E L +F M+ R++P+E+T S L +C G+LG G IH IVKSG+ S
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLG---YGMEIHSSIVKSGMASNS 517
Query: 239 ASQTSLLTMYSRCSMVEDSVKV---FNQLAYASH-----------------VTWTSFVVG 278
+ SL+ MYS+C M+E++ K+ F Q A S V+W S + G
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 279 LVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGN 338
V + E A +F M+ ++P+ FT +++L C++ A +G+QIHA K ++ +
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSD 637
Query: 339 KDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK 398
+ L+++Y KCG++ +R +F+ D V+ N+MI YA +G G EA+QLF+R+
Sbjct: 638 VYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL 697
Query: 399 LGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFE 458
+ PN VTFISIL AC + GL+++G + F MK ++ ++ H++ M+D+LG+S + +
Sbjct: 698 ENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVK 757
Query: 459 EAAMLINEVT-NPDVVLWRTLLNACRIH-GEIEMAEKIMRKVLQLAPGDGGTHILLTNLY 516
A LI E+ D V+WRTLL C IH +E+AE+ +L+L P D + LL+N+Y
Sbjct: 758 RALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVY 817
Query: 517 ASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELI 576
A AG W +V +++ +R KLKK P SWV++ E+H F+ GD +HPR EI++ L +
Sbjct: 818 ADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIY 877
Query: 577 EKAKTLGYSPDTRFVLQDLHEEKK 600
+ K S R V ++ EE +
Sbjct: 878 SEMKPFDDSSFVRGV--EVEEEDQ 899
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/449 (30%), Positives = 227/449 (50%), Gaps = 33/449 (7%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFS------YCLLG------------------- 38
+S + +CA +L + HAH+I SGF CLL
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 39 -------HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGN 91
+K+I+GY K + +A F+ MP R +V+WNSM+S ++ +G+S +++E++ +
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 92 MLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFD 151
M EG+ D TF+ I K S L G + HG+ V +G + DV ASAL+DMYAK
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDT-DVVAASALLDMYAKGK 229
Query: 152 KMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
+ ++ VF + EK+ V ++A+IAG Q+ L AL+ F+EM ++ AS L
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT 271
SC L + G +H +KS + +T+ L MY++C ++D+ +F+ + +
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 272 WTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITT 331
+ + + G Q A+ +F ++ + + +LS + +AC+ G QI+ +
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 332 KLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQ 391
K + + A I++YGKC + +A VFD + D VS N++I A+ QNG GYE L
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 392 LFKRIKKLGLAPNGVTFISILLACNNAGL 420
LF + + + P+ TF SIL AC L
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTGGSL 498
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 227/455 (49%), Gaps = 34/455 (7%)
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
R +V++N ++ +S+ + + + + L + FS +FK ++ G + G++A
Sbjct: 12 RSVVSFNRCLTEKISY-RRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 124 HGLAVVLG------------------------------LEVLDVFVASALVDMYAKFDKM 153
H ++ G + + DV + +++ Y+K + M
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 154 RDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASC 213
A+ F+ + +DVV + ++++GY Q+G +++EVF +M ++ + T A L C
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC 190
Query: 214 GNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWT 273
L D+ G IHG +V+ G ++ V + ++LL MY++ +S++VF + + V+W+
Sbjct: 191 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS 250
Query: 274 SFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKL 333
+ + G VQN +A+ F+EM + + + +S+L++C++ + +G Q+HA K
Sbjct: 251 AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 310
Query: 334 GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLF 393
+ A +++Y KC N+ A+ +FD L+ S N+MI Y+Q G++AL LF
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 370
Query: 394 KRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF-MKNNHNIELTREHFTCMIDLLG 452
R+ GL + ++ + AC + EG Q++ +K++ ++++ + ID+ G
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVAN--AAIDMYG 428
Query: 453 RSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGE 487
+ + EA + +E+ D V W ++ A +G+
Sbjct: 429 KCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 9/246 (3%)
Query: 261 FNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAM 319
NQ+ S ++ + G E+ MI P F L+ +LQ +SR
Sbjct: 40 LNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 99
Query: 320 REVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYA 379
+ + + NK +IN Y K ++ KA S F+++ D+VS NSM+
Sbjct: 100 VSASMVFDKMPLRDVVSWNK-----MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSG 154
Query: 380 YAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM-KNNHNIE 438
Y QNG +++++F + + G+ +G TF IL C+ G Q+ + + + +
Sbjct: 155 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 214
Query: 439 LTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
+ + ++D+ + KRF E+ + + + V W ++ C + + +A K +++
Sbjct: 215 VVAA--SALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 272
Query: 499 LQLAPG 504
++ G
Sbjct: 273 QKVNAG 278
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 326/574 (56%), Gaps = 37/574 (6%)
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR 198
+A+ LV++Y K A VFD + +D + + +++ Q+ L G+ L VF +
Sbjct: 40 LANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSS 99
Query: 199 -VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE-- 255
++P+++ ++ + +C NLG +G+ +H + S + ++SL+ MY++C ++
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 256 ----DSVKVFNQLAYASHVT-------------------------WTSFVVGLVQNGREE 286
DS++V N +++ + V+ WT+ + G VQ+G+
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 219
Query: 287 VAVSVFREMIRCSVSP-NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAAL 345
A SVF EM R V +P LSSI+ AC++ A G Q+H + LG + AL
Sbjct: 220 EAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 346 INLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNG 405
I++Y KC +V A+ +F + D+VS S+I AQ+G +AL L+ + G+ PN
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
Query: 406 VTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLIN 465
VTF+ ++ AC++ G VE+G +LF M ++ I + +H+TC++DLLGRS +EA LI+
Sbjct: 340 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 466 EVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVL-QLAPGDGGTHILLTNLYASAGKWN 523
+ PD W LL+AC+ G +M +I ++ D T+ILL+N+YASA W
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459
Query: 524 QVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTL- 582
+V E + + +++++K P S V+V +E F AG+ SHP +IF +L +L E+ +
Sbjct: 460 KVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRN 519
Query: 583 GYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSW 642
GY PDT ++L D+ E++K L++HSE+ A+A+ L K T IRI KNLRVCGDCH
Sbjct: 520 GYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVP-GTPIRIVKNLRVCGDCHVV 578
Query: 643 IKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
+K ++ +T R+II RD+ R+HHFKGG CSC D+W
Sbjct: 579 LKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 219/418 (52%), Gaps = 37/418 (8%)
Query: 11 CAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTW 69
CA ++LTT +A+HAH++ G C L + L++ Y KCG+ + A ++FDEMP R + W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVL-PDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
S+++A S + + ++ ++ L PD + FSA+ KA + LG + +GR+ H
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH-CHF 131
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFD--------------------------- 161
++ D V S+LVDMYAK + A VFD
Sbjct: 132 IVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEAL 191
Query: 162 ---RVLE-KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKP-NEYTLASTLASCGNL 216
R+L K++ +TALI+G+ QSG EA VF EM RV + L+S + +C NL
Sbjct: 192 ELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANL 251
Query: 217 GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFV 276
S+ G+ +HG ++ G +S V +L+ MY++CS V + +F+++ + V+WTS +
Sbjct: 252 AASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLI 311
Query: 277 VGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLGM 335
VG+ Q+G+ E A++++ +M+ V PN T ++ ACS E G ++ ++T G+
Sbjct: 312 VGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGI 371
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLT-ELDLVSVNSMIYAYAQNGFGYEALQL 392
+ L++L G+ G +D+A ++ + D + +++ A + G G +++
Sbjct: 372 RPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 40/233 (17%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPE 63
SS++ CA+ + R VH VI+ GF C+ + + LID Y KC V A+ +F M
Sbjct: 242 SSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRH 301
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
R +V+W S+I HG++++A+ LY +M+ GV P+ TF + A S +G V GR
Sbjct: 302 RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR-- 359
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
+++ K D + + +T L+ +SGL
Sbjct: 360 ---------------------ELFQSMTK--------DYGIRPSLQHYTCLLDLLGRSGL 390
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASC-----GNLGDSVNGQLIHGFIVK 231
EA + M P+E T A+ L++C G +G + L+ F +K
Sbjct: 391 LDEAENLIHTM---PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK 440
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 133/310 (42%), Gaps = 46/310 (14%)
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLV 280
+ +H IVK G+ +L+ +Y +C +++VF+++ + H+ W S + L
Sbjct: 21 TAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALN 80
Query: 281 Q-NGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNK 339
Q N + + P+ F S++++AC++ + G Q+H ++
Sbjct: 81 QANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDE 140
Query: 340 DAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFK--RIK 397
++L+++Y KCG ++ A++VFD + + +S +M+ YA++G EAL+LF+ +K
Sbjct: 141 VVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVK 200
Query: 398 KL--------GLAPNG----------------------VTFISILLACNNAGLVEEGCQL 427
L G +G + SI+ AC N G Q+
Sbjct: 201 NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV 260
Query: 428 FAFMKNNHNIELTREHFTC------MIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
H + + +C +ID+ + A + + + + DVV W +L+
Sbjct: 261 -------HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 482 CRIHGEIEMA 491
HG+ E A
Sbjct: 314 MAQHGQAEKA 323
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 6/189 (3%)
Query: 311 LQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDL 370
LQ C+ + +HA KLG+ L+N+YGKCG A VFD + D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 371 VSVNSMIYAYAQ-NGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFA 429
++ S++ A Q N G GL P+ F +++ AC N G ++ G Q+
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 430 -FMKNNH-NIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGE 487
F+ + + N E+ + + ++D+ + A + + + + + W +++ G
Sbjct: 130 HFIVSEYANDEVVK---SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 488 IEMAEKIMR 496
E A ++ R
Sbjct: 187 KEEALELFR 195
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 339/599 (56%), Gaps = 4/599 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ +++ CA + +H V+ SG + + + L+ Y KCG +A KLF M
Sbjct: 242 FDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS 301
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
VTWN MIS +V G ++++ + M+ GVLPDA TFS++ + S+ + Y ++
Sbjct: 302 RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQ 361
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H + + LD+F+ SAL+D Y K + A +F + DVV+FTA+I+GY +G
Sbjct: 362 IHCYIMRHSIS-LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNG 420
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
L ++LE+FR +V ++ PNE TL S L G L G+ +HGFI+K G ++
Sbjct: 421 LYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGC 480
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+++ MY++C + + ++F +L+ V+W S + Q+ A+ +FR+M +
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ ++S+ L AC++ G+ IH K + + + + LI++Y KCGN+ A +VF
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLF-KRIKKLGLAPNGVTFISILLACNNAGLV 421
+ E ++VS NS+I A +G ++L LF + ++K G+ P+ +TF+ I+ +C + G V
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLN 480
+EG + F M ++ I+ +EH+ C++DL GR+ R EA + + PD +W TLL
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLG 720
Query: 481 ACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKS 540
ACR+H +E+AE K++ L P + G ++L++N +A+A +W V ++++ +++ +++K
Sbjct: 721 ACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKI 780
Query: 541 PARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEK 599
P SW+++++ H F++GD++HP + I+ +L+ L+ + + GY P L K
Sbjct: 781 PGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLHPESSRK 839
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 252/501 (50%), Gaps = 13/501 (2%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVIS---SGFSYCLLGHKLIDGYIKCGSVAEARKLFDEM 61
S L+ C++ L + VHA +I SG SY +++ Y CGS ++ K+F +
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSY--TDERILGMYAMCGSFSDCGKMFYRL 96
Query: 62 PERH--IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
R I WNS+IS+ V +G QA+ Y ML GV PD TF + KA L +
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
LG++ + FVAS+L+ Y ++ K+ +FDRVL+KD V++ ++ GYA
Sbjct: 157 IDFLSDTVSSLGMDC-NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
+ G ++ F M ++ PN T L+ C + G +HG +V SG++ +
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
+ SLL+MYS+C +D+ K+F ++ A VTW + G VQ+G E +++ F EMI
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
V P+ T SS+L + S E +QIH + + + +ALI+ Y KC V A+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
++F +D+V +MI Y NG ++L++F+ + K+ ++PN +T +SIL
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 420 LVEEGCQLFAF-MKNNHNIELTREHFTC-MIDLLGRSKRFEEAAMLINEVTNPDVVLWRT 477
++ G +L F +K + R + C +ID+ + R A + ++ D+V W +
Sbjct: 456 ALKLGRELHGFIIKKGFD---NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNS 512
Query: 478 LLNACRIHGEIEMAEKIMRKV 498
++ C A I R++
Sbjct: 513 MITRCAQSDNPSAAIDIFRQM 533
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 244/500 (48%), Gaps = 13/500 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYC--LLGHKLIDGYIKCGSVAEARKLFDEM 61
+ L+ C K+ + + V S G C + LI Y++ G + KLFD +
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMD-CNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
++ V WN M++ + G ++ + M ++ + P+A TF + + L+ G
Sbjct: 200 LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ HGL VV G++ + + ++L+ MY+K + DA +F + D V + +I+GY QS
Sbjct: 260 QLHGLVVVSGVD-FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
GL E+L F EM+ V P+ T +S L S + + IH +I++ + +
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
++L+ Y +C V + +F+Q V +T+ + G + NG ++ +FR +++ +S
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
PN TL SIL ++G ++H K G + + G A+I++Y KCG ++ A +
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F+ L++ D+VS NSMI AQ+ A+ +F+++ G+ + V+ + L AC N
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
G + FM H++ + +ID+ + + A + + ++V W +++ A
Sbjct: 559 SFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA 617
Query: 482 CRIHGEI--------EMAEK 493
C HG++ EM EK
Sbjct: 618 CGNHGKLKDSLCLFHEMVEK 637
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 160/360 (44%), Gaps = 18/360 (5%)
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
F IA Y +S + E + RR L+ L +C N G+ +H F++
Sbjct: 10 FAPAIAPYKKSLPLRNSSRFLEETIPRR-------LSLLLQACSNPNLLRQGKQVHAFLI 62
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY--ASHVTWTSFVVGLVQNGREEVA 288
+ + + +L MY+ C D K+F +L +S W S + V+NG A
Sbjct: 63 VNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQA 122
Query: 289 VSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
++ + +M+ VSP+ T +++AC + + + + + LGM+ N+ ++LI
Sbjct: 123 LAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKA 182
Query: 349 YGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTF 408
Y + G +D +FD + + D V N M+ YA+ G ++ F ++ ++PN VTF
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 409 ISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT 468
+L C + L++ G QL + + ++ ++ + + RF++A+ L ++
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS 301
Query: 469 NPDVVLWRTLLNACRIHGEIE---MAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQV 525
D V W C I G ++ M E + ++ G I ++L S K+ +
Sbjct: 302 RADTVTWN-----CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 358 bits (919), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 338/643 (52%), Gaps = 56/643 (8%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL 98
+K+I ++ G + A ++F M ++ +TWNS L+ G+
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNS---------------------LLIGIS 103
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
D + F E+ D F + ++ Y + A
Sbjct: 104 KDPSRMMEAHQLFDEI------------------PEPDTFSYNIMLSCYVRNVNFEKAQS 145
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYT---LASTLASCGN 215
FDR+ KD + +I GYA+ G +A E+F M+++ NE + + S CG+
Sbjct: 146 FFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGD 201
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH-VTWTS 274
L + H F K V + T+++T Y + VE + +F + + VTW +
Sbjct: 202 LEKAS-----HFF--KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNA 254
Query: 275 FVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG 334
+ G V+N R E + +FR M+ + PN LSS L CS + ++G QIH I +K
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKST 314
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFK 394
+ + A +LI++Y KCG + A +F+V+ + D+V+ N+MI YAQ+G +AL LF+
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFR 374
Query: 395 RIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRS 454
+ + P+ +TF+++LLACN+AGLV G F M ++ +E +H+TCM+DLLGR+
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRA 434
Query: 455 KRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLT 513
+ EEA LI + P ++ TLL ACR+H +E+AE K+LQL + ++ L
Sbjct: 435 GKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLA 494
Query: 514 NLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLH 573
N+YAS +W V ++ +++ + K P SW+++ +VH F + D HP I L
Sbjct: 495 NIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLK 554
Query: 574 ELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNL 633
EL +K K GY P+ F L ++ EE+K L +HSEKLA+AF K + + I++FKNL
Sbjct: 555 ELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKL-PQGSQIQVFKNL 613
Query: 634 RVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
R+CGDCH IKF++ + R+II RD+ RFHHFK G CSC DYW
Sbjct: 614 RICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 171/329 (51%), Gaps = 15/329 (4%)
Query: 32 FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGN 91
FSY ++ + Y++ + +A+ FD MP + +WN+MI+ + G+ ++A EL+ +
Sbjct: 125 FSYNIM----LSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 92 MLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFD 151
M+ + + +++A+ + E G + +A V G V +A++ Y K
Sbjct: 181 MMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRG-----VVAWTAMITGYMKAK 231
Query: 152 KMRDAHLVF-DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
K+ A +F D + K++V + A+I+GY ++ + L++FR M++ ++PN L+S L
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
C L G+ IH + KS L + V + TSL++MY +C + D+ K+F + V
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG-EQIHAI 329
W + + G Q+G + A+ +FREMI + P+ T ++L AC+ + +G ++
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+E D +++L G+ G +++A
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEA 440
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLG-HKLIDGYIKCGSVAEARKLFDEMPE 63
SS + C+ +L R +H V S + LI Y KCG + +A KLF+ M +
Sbjct: 288 SSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
+ +V WN+MIS + HG + +A+ L+ M+ + PD TF A+ A + GLV G
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG--- 404
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
A F+ M V D +E +T ++ ++G
Sbjct: 405 -----------------------MAYFESM-----VRDYKVEPQPDHYTCMVDLLGRAGK 436
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASC 213
EAL++ R M R P+ + L +C
Sbjct: 437 LEEALKLIRSMPFR---PHAAVFGTLLGAC 463
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 355 bits (911), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 306/543 (56%), Gaps = 5/543 (0%)
Query: 138 FVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR 197
F+ LV Y + A +FD + E+D+V + +LI+GY+ G G+ EV M+
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 198 RV--KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE 255
V +PNE T S +++C G G+ IHG ++K G+ V + + Y + +
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 256 DSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS 315
S K+F L+ + V+W + +V +QNG E ++ F R P+ T ++L++C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 316 SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNS 375
+ + + IH + G GNK AL++LY K G ++ + +VF +T D ++ +
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTA 306
Query: 376 MIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
M+ AYA +GFG +A++ F+ + G++P+ VTF +L AC+++GLVEEG F M +
Sbjct: 307 MLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRY 366
Query: 436 NIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKI 494
I+ +H++CM+DLLGRS ++A LI E+ P +W LL ACR++ + ++ K
Sbjct: 367 RIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKA 426
Query: 495 MRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHT 554
++ +L P DG +++L+N+Y+++G W ++ ++ L ++ S+++ ++H
Sbjct: 427 AERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHK 486
Query: 555 FMAGDMSHPRAHEIFDMLHELIEKAKT-LGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAI 613
F+ GD SHP + +I L E+ +K K+ +GY T FVL D+ E+ K + HSEK+A+
Sbjct: 487 FVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAM 546
Query: 614 AFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCK 673
AF L I I KNLR+CGDCH K ++L+ R II RDSKRFHHF G CSC
Sbjct: 547 AFGLL-VVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCS 605
Query: 674 DYW 676
DYW
Sbjct: 606 DYW 608
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 9/360 (2%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISS-GFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
SSLI S+ R +H V+ S + + +G +L+ Y++ G A KLFDEMPE
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVE--GVLPDAYTFSAIFKAFSELGLVRYGR 121
R +V+WNS+IS + G + E+ M++ G P+ TF ++ A G GR
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
HGL + G+ + +V V +A ++ Y K + + +F+ + K++V + +I + Q+
Sbjct: 155 CIHGLVMKFGV-LEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 182 GLDGEALEVFREMVDRRV--KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
GL + L F + RRV +P++ T + L SC ++G Q IHG I+ G
Sbjct: 214 GLAEKGLAYFN--MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
T+LL +YS+ +EDS VF+++ + WT+ + +G A+ F M+
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQ-IHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+SP+ T + +L ACS + E G+ ++ + ++ D + +++L G+ G + A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 114/215 (53%), Gaps = 2/215 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ S+I+ C + S R +H V+ G + + I+ Y K G + + KLF+++
Sbjct: 137 FLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS 196
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+++V+WN+MI H+ +G +++ + + G PD TF A+ ++ ++G+VR +
Sbjct: 197 IKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQG 256
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
HGL + G + + +AL+D+Y+K ++ D+ VF + D + +TA++A YA G
Sbjct: 257 IHGLIMFGGFSG-NKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHG 315
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
+A++ F MV + P+ T L +C + G
Sbjct: 316 FGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
+SS++ A S E+ +H K + G L+ Y + G+ A +FD +
Sbjct: 33 NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 366 TELDLVSVNSMIYAYAQNGFGYEALQLFKR--IKKLGLAPNGVTFISILLACNNAGLVEE 423
E DLVS NS+I Y+ G+ + ++ R I ++G PN VTF+S++ AC G EE
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACR 483
G + + +E + I+ G++ + L +++ ++V W T++
Sbjct: 153 GRCIHGLVMKFGVLEEVKV-VNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI---V 208
Query: 484 IHGEIEMAEK 493
IH + +AEK
Sbjct: 209 IHLQNGLAEK 218
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 355 bits (910), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 332/598 (55%), Gaps = 6/598 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVIS-SGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ S+I CA + + + +HA VI S+ + + LI Y++ +++A ++F +P
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL-PDAYTFSAIFKAFSELGLVRYGR 121
+ +++W+S+I+ G +A+ ML GV P+ Y F + KA S L YG
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ HGL + L + +L DMYA+ + A VFD++ D + +IAG A +
Sbjct: 291 QIHGLCIKSEL-AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANN 349
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
G EA+ VF +M P+ +L S L + G IH +I+K G + +
Sbjct: 350 GYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVC 409
Query: 242 TSLLTMYSRCSMVEDSVKVFNQL-AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
SLLTMY+ CS + +F A V+W + + +Q+ + + +F+ M+
Sbjct: 410 NSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSEC 469
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
P+ T+ ++L+ C + ++G Q+H + K G+ + LI++Y KCG++ +AR
Sbjct: 470 EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARR 529
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
+FD + D+VS +++I YAQ+GFG EAL LFK +K G+ PN VTF+ +L AC++ GL
Sbjct: 530 IFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLL 479
VEEG +L+A M+ H I T+EH +C++DLL R+ R EA I+E+ PDVV+W+TLL
Sbjct: 590 VEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLL 649
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
+AC+ G + +A+K +L++ P + H+LL +++AS+G W ++++++ +KK
Sbjct: 650 SACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKK 709
Query: 540 SPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHE 597
P +SW++++ ++H F A D+ HP +I+ +LH + + +P + LQ +HE
Sbjct: 710 IPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLD-ECNPQHKKRLQFIHE 766
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 257/482 (53%), Gaps = 11/482 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y SLI C+ ++SL R +H H+++S Y +L + ++ Y KCGS+ +AR++FD MP
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER++V++ S+I+ + +G+ +A+ LY ML E ++PD + F +I KA + V G++
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 123 AHGLAVVLGLEVLDVFVA-SALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
H A V+ LE +A +AL+ MY +F++M DA VF + KD++ ++++IAG++Q
Sbjct: 190 LH--AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 182 GLDGEALEVFREMVDRRV-KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
G + EAL +EM+ V PNEY S+L +C +L G IHG +KS L +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
SL MY+RC + + +VF+Q+ +W + GL NG + AVSVF +M
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
P+ +L S+L A + G QIH+ K G + +L+ +Y C ++ +
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 361 VF-DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
+F D D VS N+++ A Q+ E L+LFK + P+ +T ++L C
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 420 LVEEGCQLFAFMKNNHNIELTREHF--TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRT 477
++ G Q+ + + L E F +ID+ + +A + + + N DVV W T
Sbjct: 488 SLKLGSQVHCY---SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWST 544
Query: 478 LL 479
L+
Sbjct: 545 LI 546
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 191/363 (52%), Gaps = 14/363 (3%)
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
D + + ++ MY K +RDA VFD + E+++V +T++I GY+Q+G EA+ ++ +M+
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 196 DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE 255
+ P+++ S + +C + D G+ +H ++K S + +Q +L+ MY R + +
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 220
Query: 256 DSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV-SPNPFTLSSILQAC 314
D+ +VF + ++W+S + G Q G E A+S +EM+ V PN + S L+AC
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Query: 315 SSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVN 374
SS + G QIH + K + GN AG +L ++Y +CG ++ AR VFD + D S N
Sbjct: 281 SSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWN 340
Query: 375 SMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF-MKN 433
+I A NG+ EA+ +F +++ G P+ ++ S+L A + +G Q+ ++ +K
Sbjct: 341 VIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKW 400
Query: 434 NHNIELT-----REHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGE- 487
+LT +T DL FE+ N D V W T+L AC H +
Sbjct: 401 GFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR------NNADSVSWNTILTACLQHEQP 454
Query: 488 IEM 490
+EM
Sbjct: 455 VEM 457
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 145/309 (46%), Gaps = 7/309 (2%)
Query: 175 IAGYAQSGLDGEALEVFR-EMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
I +S EALE F + K T S + +C + G+ IH I+ S
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFR 293
+ +L+MY +C + D+ +VF+ + + V++TS + G QNG+ A+ ++
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 294 EMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
+M++ + P+ F SI++AC+S + +G+Q+HA KL + A ALI +Y +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 354 NVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGL-APNGVTFISIL 412
+ A VF + DL+S +S+I ++Q GF +EAL K + G+ PN F S L
Sbjct: 218 QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 413 LACNNAGLVEEGCQLFAFMKNNHNIELTREHFT--CMIDLLGRSKRFEEAAMLINEVTNP 470
AC++ + G Q+ + EL + D+ R A + +++ P
Sbjct: 278 KACSSLLRPDYGSQIHGLCIKS---ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 471 DVVLWRTLL 479
D W ++
Sbjct: 335 DTASWNVII 343
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/594 (34%), Positives = 324/594 (54%), Gaps = 40/594 (6%)
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD--AHLVFDRVLEKDVVLFTALIAGY 178
++ HG + GL+ ++ + L+ K D A V + V ++ L+TA+I GY
Sbjct: 66 KQIHGHVLRKGLD-QSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
A G EA+ ++ M + P +T ++ L +CG + D G+ H + FV
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQL-------------AYA------------------ 267
+++ MY +C ++ + KVF+++ AYA
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 268 SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIH 327
V WT+ V G QN + + A+ F M + + + T++ + AC+ + ++
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 328 AITTKLGMEGNKDA--GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGF 385
I K G + G+ALI++Y KCGNV++A +VF + ++ + +SMI A +G
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 386 GYEALQLFK-RIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF 444
EAL LF + + + PN VTF+ L+AC+++GLV++G Q+F M ++ TR+H+
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY 424
Query: 445 TCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAP 503
TCM+DLLGR+ R +EA LI ++ P +W LL ACRIH E+AE + +L P
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEP 484
Query: 504 GDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSW-VDVDREVHTFMAGDMSH 562
G +ILL+N+YASAG W V+ ++ I++ LKK+PA SW VD + ++H F G+++H
Sbjct: 485 DIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNH 544
Query: 563 PRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCG 622
P +++I D L EL+E+ LGY PD V D+ + K L H+EKLA+AF+L T
Sbjct: 545 PMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTT-N 603
Query: 623 RTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
R + I I KNLR+C DCH +++ + +TG+ II RD+ RFHHF+ G CSC D+W
Sbjct: 604 RDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 191/400 (47%), Gaps = 39/400 (9%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAE--ARKLFDEM 61
SSLI++ +L ++ +H HV+ G C + KLI K G + AR++ + +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
R+ W ++I + GK +A+ +YG M E + P ++TFSA+ KA + + GR
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIA----- 176
+ H L V+V + ++DMY K + + A VFD + E+DV+ +T LIA
Sbjct: 170 QFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 177 --------------------------GYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
G+AQ+ EALE F M ++ +E T+A +
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYI 288
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLES--FVASQTSLLTMYSRCSMVEDSVKVFNQLAYAS 268
++C LG S KSG V ++L+ MYS+C VE++V VF + +
Sbjct: 289 SACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKN 348
Query: 269 HVTWTSFVVGLVQNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQI- 326
T++S ++GL +GR + A+ +F M+ + + PN T L ACS + + G Q+
Sbjct: 349 VFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVF 408
Query: 327 HAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
++ G++ +D +++L G+ G + +A + ++
Sbjct: 409 DSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 143/301 (47%), Gaps = 35/301 (11%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVIS-SGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+S+L+ C K L R HA GF + +G+ +ID Y+KC S+ ARK+FDEMP
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP 211
Query: 63 ERHIVTWNSMISAHVSHG-------------------------------KSKQAVELYGN 91
ER +++W +I+A+ G K ++A+E +
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 92 MLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLD-VFVASALVDMYAKF 150
M G+ D T + A ++LG +Y RA +A G D V + SAL+DMY+K
Sbjct: 272 MEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKC 331
Query: 151 DKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR-RVKPNEYTLAST 209
+ +A VF + K+V ++++I G A G EAL +F MV + +KPN T
Sbjct: 332 GNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGA 391
Query: 210 LASCGNLGDSVNGQLIHGFIVKS-GLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYAS 268
L +C + G G+ + + ++ G++ T ++ + R +++++++ ++
Sbjct: 392 LMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEP 451
Query: 269 H 269
H
Sbjct: 452 H 452
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 315/564 (55%), Gaps = 39/564 (6%)
Query: 147 YAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTL 206
YA K+R + +F + ++ D+ LFTA I + +GL +A ++ +++ + PNE+T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 207 ASTLASCGNLGDSVNGQLIHGFIVKSGL-------------------------------E 235
+S L SC + +G+LIH ++K GL E
Sbjct: 134 SSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 236 SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM 295
+ S T+++T Y++ VE + +F+ + V+W + G Q+G A+ +F+++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 296 I-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGN 354
+ P+ T+ + L ACS E G IH + N LI++Y KCG+
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 355 VDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKL-GLAPNGVTFISILL 413
+++A VF+ D+V+ N+MI YA +G+ +AL+LF ++ + GL P +TFI L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 414 ACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDV 472
AC +AGLV EG ++F M + I+ EH+ C++ LLGR+ + + A I + + D
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 473 VLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTI 532
VLW ++L +C++HG+ + ++I ++ L + G ++LL+N+YAS G + V +++ +
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489
Query: 533 RDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVL 592
++ + K P S ++++ +VH F AGD H ++ EI+ ML ++ E+ K+ GY P+T VL
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVL 549
Query: 593 QDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGR 652
QDL E +K SL HSE+LAIA+ L T + ++IFKNLRVC DCH+ K ++ +TGR
Sbjct: 550 QDLEETEKEQSLQVHSERLAIAYGLIST-KPGSPLKIFKNLRVCSDCHTVTKLISKITGR 608
Query: 653 DIIARDSKRFHHFKGGLCSCKDYW 676
I+ RD RFHHF G CSC D+W
Sbjct: 609 KIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLP 99
+I Y K G+V AR LFD M ER IV+WN MI + HG A+ L+ +L EG P
Sbjct: 198 MITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKP 257
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
D T A A S++G + GR H + L+V V + L+DMY+K + +A LV
Sbjct: 258 DEITVVAALSACSQIGALETGRWIHVFVKSSRIR-LNVKVCTGLIDMYSKCGSLEEAVLV 316
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVD-RRVKPNEYTLASTLASCGNLGD 218
F+ KD+V + A+IAGYA G +AL +F EM ++P + T TL +C + G
Sbjct: 317 FNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376
Query: 219 SVNG-QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY-ASHVTWTSFV 276
G ++ + G++ + L+++ R ++ + + + A V W+S +
Sbjct: 377 VNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
++ C+ +L T R +H V SS + + LID Y KCGS+ EA +F++ P + I
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNML-VEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
V WN+MI+ + HG S+ A+ L+ M + G+ P TF +A + GLV G R
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 382
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 217/682 (31%), Positives = 356/682 (52%), Gaps = 57/682 (8%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEAR----KLFD 59
+ SLI C T SL R VHA ++ G +L ++ + C S+ ++ +F
Sbjct: 32 FISLIHACKDTASL---RHVHAQILRRG----VLSSRVAAQLVSCSSLLKSPDYSLSIFR 84
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
ER+ N++I + + + +V + ML GV PD TF + K+ S+LG
Sbjct: 85 NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWL 144
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF----DRVLEKDVVLFTALI 175
GR H A + D FV +LVDMYAK +++ A VF DR+ ++ ++++ LI
Sbjct: 145 GRALHA-ATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI 203
Query: 176 AGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE 235
GY ++ A +FR M +R SG
Sbjct: 204 NGYCRAKDMHMATTLFRSMPER---------------------------------NSG-- 228
Query: 236 SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM 295
S ++L+ Y + + ++F + + V+WT+ + G Q G E A+S + EM
Sbjct: 229 ----SWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 296 IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNV 355
+ + PN +T++++L ACS G +IH G++ ++ G AL+++Y KCG +
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 356 DKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLAC 415
D A +VF + D++S +MI +A +G ++A+Q F+++ G P+ V F+++L AC
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 416 NNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLI-NEVTNPDVVL 474
N+ V+ G F M+ ++ IE T +H+ ++DLLGR+ + EA L+ N NPD+
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 475 WRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRD 534
W L AC+ H AE + + +L+L P G++I L +AS G V + + +++
Sbjct: 465 WAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQK 524
Query: 535 LKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQD 594
++S S++++D +++ F AGD SH EI L E+I A GY+P + + D
Sbjct: 525 RIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHD 584
Query: 595 LHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDI 654
+ EE+K + HSEKLA+ +T TT IRI KNLR+CGDCHS +K+V+ ++ RDI
Sbjct: 585 IEEEEKENVTGIHSEKLALTLGFLRTAPGTT-IRIIKNLRICGDCHSLMKYVSKISQRDI 643
Query: 655 IARDSKRFHHFKGGLCSCKDYW 676
+ RD+++FHHFK G CSC DYW
Sbjct: 644 LLRDARQFHHFKDGRCSCGDYW 665
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 149/336 (44%), Gaps = 24/336 (7%)
Query: 196 DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG-LESFVASQTSLLTMYSRCSMV 254
DR+ P+E S + +C D+ + + +H I++ G L S VA+Q L++ S
Sbjct: 22 DRQASPDESHFISLIHACK---DTASLRHVHAQILRRGVLSSRVAAQ--LVSCSSLLKSP 76
Query: 255 EDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQAC 314
+ S+ +F + + + GL +N R E +V F M+R V P+ T +L++
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 315 SSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF----DVLTELDL 370
S R +G +HA T K ++ + +L+++Y K G + A VF D + + +
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 371 VSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF 430
+ N +I Y + + A LF+ + + N ++ +++ ++G + QLF
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPE----RNSGSWSTLIKGYVDSGELNRAKQLFEL 252
Query: 431 MKNNHNIELTREHFTCMIDLLGRSKRFEEAAM----LINEVTNPDVVLWRTLLNACRIHG 486
M + + +T +I+ ++ +E A ++ + P+ +L+AC G
Sbjct: 253 MPEKNVVS-----WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSG 307
Query: 487 EIEMAEKIMRKVLQLAPG-DGGTHILLTNLYASAGK 521
+ +I +L D L ++YA G+
Sbjct: 308 ALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 316/544 (58%), Gaps = 12/544 (2%)
Query: 141 SALVDMYAKFDKMRDAHLVFDRVLEKDVV---LFTALIAGYAQSGLDGEALEVFREMVDR 197
S L+ +++ ++ A +FD V + ++ ++ A+ GY+++G +AL V+ +M+
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 198 RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDS 257
++P ++++ L +C +L D G+ IH IVK + LL +Y + +D+
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 258 VKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSR 317
KVF+ ++ + VTW S + L + R ++FR+M + + TL++IL ACS
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 318 AMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMI 377
A G++IHA K + + +L+++YGKCG V+ +R VFDV+ DL S N M+
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 378 YAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
YA NG E + LF+ + + G+AP+G+TF+++L C++ GL E G LF MK +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 438 ELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMR 496
EH+ C++D+LGR+ + +EA +I + P +W +LLN+CR+HG + + E +
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 530
Query: 497 KVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFM 556
++ L P + G +++++N+YA A W+ V +++ ++ +KK SWV V ++ F+
Sbjct: 531 ELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFV 590
Query: 557 AGDMSHPRAHE----IFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLA 612
AG R + ++ L E IEK+ GYSP+T VL D+ EE K + + HSE+LA
Sbjct: 591 AGGGYEFRNSDEYKKVWTELQEAIEKS---GYSPNTSVVLHDVDEETKANWVCGHSERLA 647
Query: 613 IAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSC 672
++L T G IRI KNLRVC DCHSW+K V+ +T R I+ RD+KRFHHF G+CSC
Sbjct: 648 TTYSLIHT-GEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSC 706
Query: 673 KDYW 676
KDYW
Sbjct: 707 KDYW 710
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 163/330 (49%), Gaps = 5/330 (1%)
Query: 40 KLIDGYIKCGSVAEARKLFDEMPERHIVT---WNSMISAHVSHGKSKQAVELYGNMLVEG 96
KLI + C + ARK+FD++ + ++T W +M + +G + A+ +Y +ML
Sbjct: 172 KLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSF 231
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
+ P ++ S KA +L +R GR H +V E +D V + L+ +Y + DA
Sbjct: 232 IEPGNFSISVALKACVDLKDLRVGRGIHA-QIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 157 HLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNL 216
VFD + E++VV + +LI+ ++ E +FR+M + + + TL + L +C +
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 217 GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFV 276
+ G+ IH I+KS + V SL+ MY +C VE S +VF+ + +W +
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 277 VGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLGM 335
NG E +++F MI V+P+ T ++L CS + E G + + T+ +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVL 365
+ A L+++ G+ G + +A V + +
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETM 500
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPE 63
++++ C+ +L T + +HA ++ S + L + L+D Y KCG V +R++FD M
Sbjct: 341 TTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLT 400
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ + +WN M++ + +G ++ + L+ M+ GV PD TF A+ S+ GL YG
Sbjct: 401 KDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYG 457
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 352 bits (902), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 225/681 (33%), Positives = 350/681 (51%), Gaps = 47/681 (6%)
Query: 5 SSLITQCA---HTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEM 61
S L+ C H +++ ++ + IS G + + LI GY + G A L +M
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGL---VTWNILIGGYNQLGKCDAAMDLMQKM 308
Query: 62 PERHIV----TWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLV 117
I TW +MIS + +G QA++++ M + GV+P+A T + A S L ++
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 118 RYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAG 177
G H +AV +G + DV V ++LVDMY+K K+ DA VFD V KDV + ++I G
Sbjct: 369 NQGSEVHSIAVKMGF-IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITG 427
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF 237
Y Q+G G+A E+F M D ++PN T + +I G+I K+G E
Sbjct: 428 YCQAGYCGKAYELFTRMQDANLRPNIITWNT---------------MISGYI-KNGDEG- 470
Query: 238 VASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR 297
+ ++ R +E KV A TW + G +QNG+++ A+ +FR+M
Sbjct: 471 -----EAMDLFQR---MEKDGKVQRNTA-----TWNLIIAGYIQNGKKDEALELFRKMQF 517
Query: 298 CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDK 357
PN T+ S+L AC++ ++ +IH + ++ AL + Y K G+++
Sbjct: 518 SRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEY 577
Query: 358 ARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNN 417
+R++F + D+++ NS+I Y +G AL LF ++K G+ PN T SI+LA
Sbjct: 578 SRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL 637
Query: 418 AGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWR 476
G V+EG ++F + N+++I EH + M+ L GR+ R EEA I E+ + +W
Sbjct: 638 MGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWE 697
Query: 477 TLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLK 536
+ L CRIHG+I+MA + L P + T +++ +YA K + +E RD
Sbjct: 698 SFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNL 757
Query: 537 LKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLH 596
LKK +SW++V +HTF GD S D+L+ L+EK L D +
Sbjct: 758 LKKPLGQSWIEVRNLIHTFTTGDQSKL----CTDVLYPLVEKMSRLDNRSDQYNGELWIE 813
Query: 597 EEKKMSSLYYHSEKLAIAFALWKTCGRT-TAIRIFKNLRVCGDCHSWIKFVTLLTGRDII 655
EE + + HSEK A+AF L + G + T IRI KNLR+C DCH K+V+ G DI+
Sbjct: 814 EEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDIL 873
Query: 656 ARDSKRFHHFKGGLCSCKDYW 676
D++ HHFK G CSCKDYW
Sbjct: 874 LEDTRCLHHFKNGDCSCKDYW 894
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 234/484 (48%), Gaps = 38/484 (7%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
Y L+ C + S+ R +HA + KL+ Y KCG +A+ARK+FD M E
Sbjct: 84 YLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE 143
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
R++ TW++MI A+ + ++ +L+ M+ +GVLPD + F I + + G V G+
Sbjct: 144 RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVI 203
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H + + LG+ + V+++++ +YAK ++ A F R+ E+DV+ + +++ Y Q+G
Sbjct: 204 HSVVIKLGMSSC-LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
EA+E+ +EM + P T + LG
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG-------------------------- 296
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHV-TWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+C D ++ + V TWT+ + GL+ NG A+ +FR+M V P
Sbjct: 297 ------KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
N T+ S + ACS + G ++H+I K+G + G +L+++Y KCG ++ AR VF
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
D + D+ + NSMI Y Q G+ +A +LF R++ L PN +T+ +++ G
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEG 470
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRTL 478
E LF M+ + ++ + +I ++ + +EA L ++ P+ V +L
Sbjct: 471 EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSL 530
Query: 479 LNAC 482
L AC
Sbjct: 531 LPAC 534
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 5/249 (2%)
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL--ESFVASQTS 243
EA + + + K T L SC + G G+++H + GL E V +T
Sbjct: 64 EAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETK 120
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
LL+MY++C + D+ KVF+ + + TW++ + + R +FR M++ V P+
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
F ILQ C++ E G+ IH++ KLGM +++ +Y KCG +D A F
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
+ E D+++ NS++ AY QNG EA++L K ++K G++P VT+ ++ N G +
Sbjct: 241 RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDA 300
Query: 424 GCQLFAFMK 432
L M+
Sbjct: 301 AMDLMQKME 309
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 223/681 (32%), Positives = 358/681 (52%), Gaps = 57/681 (8%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSG------FSYCLLGHKLIDGYIKCGSVAEARKLFD 59
SL+ C K+L L +H I G F+ L+ H I ++ AR+L
Sbjct: 10 SLLNSC---KNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAIS---ISDALPYARRLLL 63
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLPDAYTFSAIFKAFSELGLVR 118
PE +N+++ + + +V ++ M+ +G V PD+++F+ + KA +R
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G + H A+ GLE +FV + L+ MY + A VFD + + ++V + A+I
Sbjct: 124 TGFQMHCQALKHGLES-HLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
+ A E+F +M+ R
Sbjct: 183 FRGNDVAGAREIFDKMLVRNH--------------------------------------- 203
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
S +L Y + +E + ++F+++ + V+W++ +VG+ NG + FRE+ R
Sbjct: 204 TSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA 263
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+SPN +L+ +L ACS E G+ +H K G ALI++Y +CGNV A
Sbjct: 264 GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMA 323
Query: 359 RSVFDVLTELD-LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNN 417
R VF+ + E +VS SMI A +G G EA++LF + G+ P+G++FIS+L AC++
Sbjct: 324 RLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSH 383
Query: 418 AGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWR 476
AGL+EEG F+ MK ++IE EH+ CM+DL GRS + ++A I ++ P ++WR
Sbjct: 384 AGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWR 443
Query: 477 TLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLK 536
TLL AC HG IE+AE++ +++ +L P + G +LL+N YA+AGKW V ++ ++ +
Sbjct: 444 TLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQR 503
Query: 537 LKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAK-TLGYSPDTRFVLQDL 595
+KK+ A S V+V + ++ F AG+ E + L E+I + K GY+P+ L D+
Sbjct: 504 IKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDV 563
Query: 596 HEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDII 655
EE+K + HSEKLA+AFAL + IRI KNLR+C DCH+ +K + + G +I+
Sbjct: 564 EEEEKEDQVSKHSEKLALAFAL-ARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEIL 622
Query: 656 ARDSKRFHHFKGGLCSCKDYW 676
RD RFH FK G CSC+DYW
Sbjct: 623 VRDRNRFHSFKDGSCSCRDYW 643
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 190/408 (46%), Gaps = 52/408 (12%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
++ +I + +SL T +H + G S+ +G LI Y CG V ARK+FDEM
Sbjct: 109 FAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH 168
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+ ++V WN++I+A A E++ MLV R
Sbjct: 169 QPNLVAWNAVITACFRGNDVAGAREIFDKMLV---------------------------R 201
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H +V +A Y K ++ A +F + +D V ++ +I G A +G
Sbjct: 202 NH--------TSWNVMLAG-----YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 248
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
E+ FRE+ + PNE +L L++C G G+++HGF+ K+G V+
Sbjct: 249 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 308
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASH-VTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
+L+ MYSRC V + VF + V+WTS + GL +G+ E AV +F EM V+
Sbjct: 309 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 368
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKL-GMEGNKDAGAALINLYGKCGNVDKARS 360
P+ + S+L ACS + E GE + ++ +E + +++LYG+ G + KA
Sbjct: 369 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA-- 426
Query: 361 VFDVLTELDLVSV----NSMIYAYAQNGFGYEALQLFKRIKKLGLAPN 404
+D + ++ + +++ A + +G A Q+ +R+ +L PN
Sbjct: 427 -YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELD--PN 471
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/645 (30%), Positives = 338/645 (52%), Gaps = 42/645 (6%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMP----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
+ ++ Y K G V +A L DEM + IVTWNS++S + S G SK A+ + M +
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMR 154
G+ P + S++ +A +E G ++ G+ HG ++ DV+V + L+DMY K +
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY-ILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 155 DAHLVFDRVLEKDVVLFTALIAGYAQSGL--DGEALEVFREMVDRRVKPNEYTLASTLAS 212
A +VFD + K++V + +L++G + + L D EAL + M +KP+ T S +
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMI--RMEKEGIKPDAITWNSLASG 335
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
LG + G + + G+ V V+W
Sbjct: 336 YATLGKPEKALDVIGKMKEKGVAPNV-------------------------------VSW 364
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
T+ G +NG A+ VF +M V PN T+S++L+ ++ G+++H +
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR 424
Query: 333 LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQL 392
+ + AL+++YGK G++ A +F + L S N M+ YA G G E +
Sbjct: 425 KNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAA 484
Query: 393 FKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLG 452
F + + G+ P+ +TF S+L C N+GLV+EG + F M++ + I T EH +CM+DLLG
Sbjct: 485 FSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLG 544
Query: 453 RSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHIL 511
RS +EA I ++ PD +W L++C+IH ++E+AE +++ L P + +++
Sbjct: 545 RSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMM 604
Query: 512 LTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDM 571
+ NLY++ +W V ++ +R+ +++ SW+ +D+ VH F A +HP +I+
Sbjct: 605 MINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFE 664
Query: 572 LHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFK 631
L++L+ + K GY PDT + QD+ + +K L H+EKLA+ + L K G IR+ K
Sbjct: 665 LYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKG-LAPIRVVK 723
Query: 632 NLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
N +C D H+ K++++L R+I+ ++ R HHF+ G CSC D W
Sbjct: 724 NTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 67/420 (15%)
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G HG + GL+ D V SA + Y + + A+ +FD + ++D + + ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
+SG +A+E+FREM K + T+ L C N G+ IHG++++ GLES V+
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 240 SQTSLLTMYSRCSMVEDSVKVFN------------------QLAYASH------------ 269
SL+ MYSR +E S KVFN +L Y
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 270 -----VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGE 324
VTW S + G G + A++V + M + P+ ++SS+LQA + ++G+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 325 QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNG 384
IH + + + LI++Y K G + AR VFD++ ++V+ NS++ +
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 385 FGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF 444
+A L R++K G+ P+ +T+ S+ G E+
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA-------------------- 345
Query: 445 TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG 504
+D++G+ K A P+VV W + + C +G A K+ K+ + G
Sbjct: 346 ---LDVIGKMKEKGVA---------PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 296/525 (56%), Gaps = 8/525 (1%)
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKP-NEYTLASTLASCGNLG 217
VF + L + +I ++ S E +FR + P N + + L C G
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVV 277
D + G IHG I G S T+L+ +YS C D+ KVF+++ V+W
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 278 GLVQNGREEVAVSVFREM---IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG 334
++N R + +F +M + V P+ T LQAC++ + G+Q+H + G
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG 247
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFK 394
+ G + L+++Y +CG++DKA VF + E ++VS ++I A NGFG EA++ F
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 395 RIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH-NIELTREHFTCMIDLLGR 453
+ K G++P T +L AC+++GLV EG F M++ I+ H+ C++DLLGR
Sbjct: 308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR 367
Query: 454 SKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILL 512
++ ++A LI + PD +WRTLL ACR+HG++E+ E+++ +++L + G ++LL
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLL 427
Query: 513 TNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
N Y++ GKW +V E+++ +++ ++ P S +++ VH F+ D+SHPR EI+ ML
Sbjct: 428 LNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKML 487
Query: 573 HELIEKAKTLGYSPDTRFVLQDLH-EEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFK 631
E+ ++ K GY + L +L EE+K +L YHSEKLAIAF + T TT IR+ K
Sbjct: 488 AEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTT-IRVTK 546
Query: 632 NLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
NLR C DCH++ KFV+ + R +I RD RFHHFKGG CSC D+W
Sbjct: 547 NLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 11 CAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTW 69
C + L +H + S GF S LL L+D Y C + +A K+FDE+P+R V+W
Sbjct: 123 CIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSW 182
Query: 70 NSMISAHVSHGKSKQAVELYGNML--VEG-VLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
N + S ++ + +++ + L+ M V+G V PD T +A + LG + +G++ H
Sbjct: 183 NVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDF 242
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGE 186
GL + +++ LV MY++ M A+ VF + E++VV +TALI+G A +G E
Sbjct: 243 IDENGLSGA-LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 187 ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQL 224
A+E F EM+ + P E TL L++C + G G +
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMM 339
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 348 bits (892), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 201/585 (34%), Positives = 331/585 (56%), Gaps = 13/585 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
++SL++ CA + L H+ +I + L +G+ L+D Y KCG++ +AR++F+ M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+R VTWN++I ++V +A +L+ M + G++ D ++ KA + + + G++
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H L+V GL+ D+ S+L+DMY+K ++DA VF + E VV ALIAGY+Q+
Sbjct: 551 VHCLSVKCGLD-RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES---FVA 239
L+ EA+ +F+EM+ R V P+E T A+ + +C G HG I K G S ++
Sbjct: 610 LE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYA-SHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
SLL MY + ++ +F++L+ S V WT + G QNG E A+ ++EM
Sbjct: 669 --ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
V P+ T ++L+ CS + G IH++ L + ++ LI++Y KCG++ +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 359 RSVFDVLTEL-DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNN 417
VFD + ++VS NS+I YA+NG+ +AL++F +++ + P+ +TF+ +L AC++
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 418 AGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN--PDVVLW 475
AG V +G ++F M + IE +H CM+DLLGR +EA I E N PD LW
Sbjct: 847 AGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI-EAQNLKPDARLW 905
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDL 535
+LL ACRIHG+ E K+++L P + ++LL+N+YAS G W + ++ +RD
Sbjct: 906 SSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 536 KLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAK 580
+KK P SW+DV++ H F AGD SH +I L +L + K
Sbjct: 966 GVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 245/467 (52%), Gaps = 19/467 (4%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
+I+ YI+ G + +AR LF EM +V WN MIS H G A+E + NM V
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
T ++ A + + G H A+ LGL +++V S+LV MY+K +KM A VF
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL-ASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
+ + EK+ V + A+I GYA +G + +E+F +M +++T S L++C D
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLV 280
G H I+K L + +L+ MY++C +ED+ ++F ++ +VTW + + V
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
Q+ E A +F+ M C + + L+S L+AC+ G+Q+H ++ K G++ +
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
G++LI++Y KCG + AR VF L E +VS+N++I Y+QN EA+ LF+ + G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRG 624
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCM-----IDLLG--- 452
+ P+ +TF +I+ AC+ + G Q ++T+ F+ I LLG
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHG--------QITKRGFSSEGEYLGISLLGMYM 676
Query: 453 RSKRFEEAAMLINEVTNP-DVVLWRTLLNACRIHGEIEMAEKIMRKV 498
S+ EA L +E+++P +VLW +++ +G E A K +++
Sbjct: 677 NSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 225/464 (48%), Gaps = 43/464 (9%)
Query: 21 RAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSH 79
+AVH+ + G S LG+ ++D Y KC V+ A K FD + E+ + WNSM+S + S
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSI 138
Query: 80 GKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFV 139
GK + + + ++ + P+ +TFS + + V +GR+ H + +GLE + +
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE-RNSYC 197
Query: 140 ASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRV 199
ALVDMYAK D++ DA VF+ +++ + V +T L +GY ++GL EA+ VF M D
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 200 KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVK 259
+P+ +++ Y R ++D+
Sbjct: 258 RPDHLAF-----------------------------------VTVINTYIRLGKLKDARL 282
Query: 260 VFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAM 319
+F +++ V W + G + G E VA+ F M + SV TL S+L A A
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 320 REVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYA 379
++G +HA KLG+ N G++L+++Y KC ++ A VF+ L E + V N+MI
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 380 YAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIEL 439
YA NG ++ ++LF +K G + TF S+L C + +E G Q + + +L
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK---KL 459
Query: 440 TREHF--TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
+ F ++D+ + E+A + + + D V W T++ +
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 336/607 (55%), Gaps = 48/607 (7%)
Query: 110 AFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMY---AKFDKMRD----AHLVFDR 162
+FS+L ++ HG + L + DVFVAS L+ + + F+K + A+ +F +
Sbjct: 24 SFSDLKII------HGFLLRTHL-ISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 163 VLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNG 222
+ ++ +F LI ++ +A + +M+ R+ P+ T + + + + G
Sbjct: 77 IQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVG 136
Query: 223 QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVG---- 278
+ H IV+ G ++ V + SL+ MY+ C + + ++F Q+ + V+WTS V G
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC 196
Query: 279 -LVQNGRE--------------------------EVAVSVFREMIRCSVSPNPFTLSSIL 311
+V+N RE E A+ +F M R V N + S++
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 312 QACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLV 371
+C+ E GE+ + K M N G AL++++ +CG+++KA VF+ L E D +
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 372 SVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM 431
S +S+I A +G ++A+ F ++ LG P VTF ++L AC++ GLVE+G +++ M
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 432 KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEM 490
K +H IE EH+ C++D+LGR+ + EA I ++ P+ + LL AC+I+ E+
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEV 436
Query: 491 AEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDR 550
AE++ ++++ P G ++LL+N+YA AG+W+++ ++ +++ +KK P S +++D
Sbjct: 437 AERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDG 496
Query: 551 EVHTF-MAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSE 609
+++ F M D HP +I E++ K + +GY +T D+ EE+K SS++ HSE
Sbjct: 497 KINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSE 556
Query: 610 KLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGL 669
KLAIA+ + KT TT IRI KNLRVC DCH+ K ++ + GR++I RD RFHHF+ G+
Sbjct: 557 KLAIAYGMMKTKPGTT-IRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGV 615
Query: 670 CSCKDYW 676
CSC+DYW
Sbjct: 616 CSCRDYW 622
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 159/339 (46%), Gaps = 33/339 (9%)
Query: 54 ARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSE 113
A +F ++ ++ +N +I + + +A Y ML + PD TF + KA SE
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 114 LGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTA 173
+ V G + H V G + DV+V ++LV MYA + A +F ++ +DVV +T+
Sbjct: 130 MECVLVGEQTHSQIVRFGFQN-DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTS 188
Query: 174 LIAGYAQSGLDGEALEVFREMVDRR-------------------------------VKPN 202
++AGY + G+ A E+F EM R V N
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 203 EYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFN 262
E + S ++SC +LG G+ + ++VKS + + T+L+ M+ RC +E ++ VF
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 263 QLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREV 322
L ++W+S + GL +G A+ F +MI P T +++L ACS + E
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 323 GEQIHAITTK-LGMEGNKDAGAALINLYGKCGNVDKARS 360
G +I+ K G+E + ++++ G+ G + +A +
Sbjct: 369 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAEN 407
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 156/339 (46%), Gaps = 39/339 (11%)
Query: 31 GFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYG 90
GF + ++ GY KCG V AR++FDEMP R++ TW+ MI+ + + ++A++L+
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 238
Query: 91 NMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKF 150
M EGV+ + ++ + + LG + +G RA+ V + V ++ + +ALVDM+ +
Sbjct: 239 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTV-NLILGTALVDMFWRC 297
Query: 151 DKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
+ A VF+ + E D + ++++I G A G +A+ F +M+ P + T + L
Sbjct: 298 GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVL 357
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESF--VASQTSLLTMYSRCSMVEDSVKVFNQLAYAS 268
++C HG +V+ GLE + + + + D + +LA A
Sbjct: 358 SACS-----------HGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAE 406
Query: 269 HVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA 328
+ +++ V PN L ++L AC EV E++
Sbjct: 407 NF------------------------ILKMHVKPNAPILGALLGACKIYKNTEVAERVGN 442
Query: 329 ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE 367
+ K+ E + L N+Y G DK S+ D++ E
Sbjct: 443 MLIKVKPE-HSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 315/556 (56%), Gaps = 6/556 (1%)
Query: 21 RAVHAHVISSGFSYC--LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVS 78
R +H V+ SG+ C ++ L+ Y K + ++FDEMPER + +WN++IS
Sbjct: 127 RMIHTLVVKSGY-VCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 79 HGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVF 138
G++++A+EL+G M G P++ + + A S L + G+ H V G E LD +
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE-LDEY 244
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR 198
V SALVDMY K D + A VF ++ K +V + ++I GY G +E+ M+
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 199 VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSV 258
+P++ TL S L +C + ++G+ IHG++++S + + + SL+ +Y +C +
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
VF++ +W + + G AV V+ +M+ V P+ T +S+L ACS A
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
E G+QIH ++ +E ++ +AL+++Y KCGN +A +F+ + + D+VS MI
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIE 438
AY +G EAL F ++K GL P+GVT +++L AC +AGL++EG + F+ M++ + IE
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 439 LTREHFTCMIDLLGRSKRFEEAAMLINEV--TNPDVVLWRTLLNACRIHGEIEMAEKIMR 496
EH++CMID+LGR+ R EA +I + T+ + L TL +AC +H E + ++I R
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 497 KVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFM 556
+++ P D T+++L NLYAS W+ ++ ++++ L+K P SW+++ +V F
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664
Query: 557 AGDMSHPRAHEIFDML 572
A D SH RA +++ L
Sbjct: 665 AEDRSHLRAENVYECL 680
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 249/486 (51%), Gaps = 6/486 (1%)
Query: 6 SLITQCAH-TKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
SL+ +C + TKSL ++ VH +++ G +L LI+ Y C AR +F+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 64 R-HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGV-LPDAYTFSAIFKAFSELGLVRYGR 121
R + WNS++S + + +E++ +L + +PD++TF + KA+ LG GR
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
H L V G V DV VAS+LV MYAKF+ ++ VFD + E+DV + +I+ + QS
Sbjct: 128 MIHTLVVKSGY-VCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
G +ALE+F M +PN +L +++C L G+ IH VK G E
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
++L+ MY +C +E + +VF ++ S V W S + G V G + V + MI
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
P+ TL+SIL ACS G+ IH + + + +LI+LY KCG + A +V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F + S N MI +Y G ++A++++ ++ +G+ P+ VTF S+L AC+ +
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
E+G Q+ + + +E + ++D+ + +EA + N + DVV W +++A
Sbjct: 427 EKGKQIHLSISESR-LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 482 CRIHGE 487
HG+
Sbjct: 486 YGSHGQ 491
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 137/297 (46%), Gaps = 4/297 (1%)
Query: 206 LASTLASCGNLGDSVNG-QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL 264
L S L C N S+ +L+H I+ GL V SL+ +Y C + VF
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 265 AYASHV-TWTSFVVGLVQNGREEVAVSVFREMIRCSVS-PNPFTLSSILQACSSRAMREV 322
S V W S + G +N + VF+ ++ CS+ P+ FT ++++A + +
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 323 GEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQ 382
G IH + K G + ++L+ +Y K + + VFD + E D+ S N++I + Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 383 NGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTRE 442
+G +AL+LF R++ G PN V+ + AC+ +E G ++ EL
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEY 244
Query: 443 HFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVL 499
+ ++D+ G+ E A + ++ +V W +++ G+ + +I+ +++
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 342 bits (877), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 321/578 (55%), Gaps = 3/578 (0%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVI-SSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
S ++ C + ++ ++HA+ + +S S +G L+D Y + G + ++ ++F EMP
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
R+ VTW ++I+ V G+ K+ + + M L D YTF+ KA + L V+YG+
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H +V G V + VA++L MY + +M+D +F+ + E+DVV +T+LI Y + G
Sbjct: 232 HTHVIVRGF-VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
+ +A+E F +M + +V PNE T AS ++C +L V G+ +H ++ GL ++ S
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
++ MYS C + + +F + ++W++ + G Q G E F M + P
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
F L+S+L + A+ E G Q+HA+ G+E N ++LIN+Y KCG++ +A +F
Sbjct: 411 DFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFG 470
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
D+VS+ +MI YA++G EA+ LF++ K+G P+ VTFIS+L AC ++G ++
Sbjct: 471 ETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDL 530
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNAC 482
G F M+ +N+ +EH+ CM+DLL R+ R +A +INE++ D V+W TLL AC
Sbjct: 531 GFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590
Query: 483 RIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPA 542
+ G+IE + ++L+L P + L N+Y+S G + ++ ++ + K P
Sbjct: 591 KAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 650
Query: 543 RSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAK 580
S + + V F++GD HP++ +I+++L + A+
Sbjct: 651 WSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVSGAE 688
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 227/464 (48%), Gaps = 14/464 (3%)
Query: 46 IKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLV--EGVLPDAYT 103
I G++ AR++FD+MP IV+W S+I +V+ S +A+ L+ M V V PD
Sbjct: 51 INAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 104 FSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV 163
S + KA + + YG H AV L + V+V S+L+DMY + K+ + VF +
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSL-LSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 164 LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQ 223
++ V +TA+I G +G E L F EM + YT A L +C L G+
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 224 LIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNG 283
IH ++ G + + SL TMY+ C ++D + +F ++ V+WTS +V + G
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 284 REEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGA 343
+E AV F +M V PN T +S+ AC+S + GEQ+H LG+ +
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 344 ALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAP 403
+++ +Y CGN+ A +F + D++S +++I Y Q GFG E + F +++ G P
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 404 NGVTFISILLACNNAGLVEEGCQLFAF-----MKNNHNIELTREHFTCMIDLLGRSKRFE 458
S+L N ++E G Q+ A ++ N + + +I++ + +
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR------SSLINMYSKCGSIK 463
Query: 459 EAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA 502
EA+M+ E D+V ++N HG+ + A + K L++
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG 507
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 213/467 (45%), Gaps = 41/467 (8%)
Query: 153 MRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM--VDRRVKPNEYTLASTL 210
+R A VFD++ D+V +T++I Y + EAL +F M VD V P+ L+ L
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
+CG + G+ +H + VK+ L S V +SLL MY R ++ S +VF+++ + + V
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAIT 330
TWT+ + GLV GR + ++ F EM R + +T + L+AC+ + G+ IH
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 331 TKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEAL 390
G +L +Y +CG + +F+ ++E D+VS S+I AY + G +A+
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 391 QLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKN---NHNIELTREHFTCM 447
+ F +++ + PN TF S+ AC + + G QL + + N ++ ++ M
Sbjct: 296 ETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS----M 351
Query: 448 IDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGG 507
+ + A++L + D++ W T++ G E K + Q G
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ--SGTKP 409
Query: 508 THILLTNLYASAGKWNQV--------------IEMKTTIRDLKLK--------KSPARSW 545
T L +L + +G + +E +T+R + K + +
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIF 469
Query: 546 VDVDRE----VHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDT 588
+ DR+ + + G H ++ E D L EK+ +G+ PD+
Sbjct: 470 GETDRDDIVSLTAMINGYAEHGKSKEAID----LFEKSLKVGFRPDS 512
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 341 bits (875), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/526 (34%), Positives = 303/526 (57%), Gaps = 3/526 (0%)
Query: 153 MRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
M A +F+ + E D+V+F ++ GY++ E +F E+++ + P+ YT S L +
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
C G+ +H +K GL+ V +L+ MY+ C V+ + VF+++ V +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
+ + G + R A+S+FREM + PN TL S+L +C+ ++G+ IH K
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 333 LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQL 392
ALI+++ KCG++D A S+F+ + D + ++MI AYA +G +++ +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 393 FKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLG 452
F+R++ + P+ +TF+ +L AC++ G VEEG + F+ M + I + +H+ M+DLL
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 453 RSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHIL 511
R+ E+A I+++ +P +LWR LL AC H +++AEK+ ++ +L GG +++
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVI 438
Query: 512 LTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDM 571
L+NLYA KW V ++ ++D K K P S ++V+ VH F +GD ++
Sbjct: 439 LSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRA 498
Query: 572 LHELIEKAKTLGYSPDTRFVLQ-DLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIF 630
L E++++ K GY PDT V+ ++++++K +L YHSEKLAI F L T TT IR+
Sbjct: 499 LDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTT-IRVV 557
Query: 631 KNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
KNLRVC DCH+ K ++L+ GR ++ RD +RFHHF+ G CSC D+W
Sbjct: 558 KNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 193/363 (53%), Gaps = 8/363 (2%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKC---GSVAEARKLFDEMPE 63
LI++C SL L + A+ I S KLI+ + S++ AR LF+ M E
Sbjct: 35 LISKC---NSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
IV +NSM + + L+ +L +G+LPD YTF ++ KA + + GR+
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H L++ LGL+ +V+V L++MY + + + A VFDR++E VV + A+I GYA+
Sbjct: 152 HCLSMKLGLDD-NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
EAL +FREM + +KPNE TL S L+SC LG G+ IH + K +V T+
Sbjct: 211 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 270
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
L+ M+++C ++D+V +F ++ Y W++ +V +G+ E ++ +F M +V P+
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 330
Query: 304 PFTLSSILQACSSRAMREVGEQIHA-ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
T +L ACS E G + + + +K G+ + ++++L + GN++ A
Sbjct: 331 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 390
Query: 363 DVL 365
D L
Sbjct: 391 DKL 393
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 3/267 (1%)
Query: 225 IHGFIVKSGLE--SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQN 282
I + +KS +E SFVA + T S + + +F ++ V + S G +
Sbjct: 48 IQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRF 107
Query: 283 GREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAG 342
S+F E++ + P+ +T S+L+AC+ E G Q+H ++ KLG++ N
Sbjct: 108 TNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVC 167
Query: 343 AALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
LIN+Y +C +VD AR VFD + E +V N+MI YA+ EAL LF+ ++ L
Sbjct: 168 PTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK 227
Query: 403 PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAM 462
PN +T +S+L +C G ++ G + + K + + + + T +ID+ + ++A
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN-TALIDMFAKCGSLDDAVS 286
Query: 463 LINEVTNPDVVLWRTLLNACRIHGEIE 489
+ ++ D W ++ A HG+ E
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAE 313
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/649 (30%), Positives = 338/649 (52%), Gaps = 49/649 (7%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDG----YIKCGSVAEARKLFDEM 61
S++ C L +H H I +GF L +++G Y +C ++EA LF+ M
Sbjct: 130 SVLRMCTSLVLLLRGEQIHGHTIKTGFD---LDVNVVNGLLAMYAQCKRISEAEYLFETM 186
Query: 62 P-ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
E++ VTW SM++ + +G + +A+E + ++ EG + YTF ++ A + + R G
Sbjct: 187 EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVG 246
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
+ H V G + +++V SAL+DMYAK +M A + + + DVV + ++I G +
Sbjct: 247 VQVHCCIVKSGFKT-NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN--GQLIHGFIVKSGLESFV 238
GL GEAL +F M +R +K +++T+ S L +C L + H IVK+G ++
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFALSRTEMKIASSAHCLIVKTGYATYK 364
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
+L+ MY++ +++ ++KVF + ++WT+ V G NG + A+ +F M
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
++P+ +S+L A + + E G+Q+H K G + +L+ +Y KCG+++ A
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Query: 359 RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNA 418
+F+ + DL++ +I YA+N
Sbjct: 485 NVIFNSMEIRDLITWTCLIVGYAKN----------------------------------- 509
Query: 419 GLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRT 477
GL+E+ + F M+ + I EH+ CMIDL GRS F + L++++ PD +W+
Sbjct: 510 GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKA 569
Query: 478 LLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKL 537
+L A R HG IE E+ + +++L P + ++ L+N+Y++AG+ ++ ++ ++ +
Sbjct: 570 ILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
Query: 538 KKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHE 597
K P SWV+ +VH+FM+ D HPR EI+ + E++ K GY D F L DL +
Sbjct: 630 SKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDK 689
Query: 598 EKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFV 646
E K L YHSEKLA+AF L IRI KNLRVCGDCHS +K +
Sbjct: 690 EGKELGLAYHSEKLAVAFGLL-VVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 260/496 (52%), Gaps = 10/496 (2%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL 98
+ +I Y +++A KLF P ++ ++WN++IS + G +A L+ M +G+
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
P+ YT ++ + + L L+ G + HG + G + LDV V + L+ MYA+ ++ +A
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFD-LDVNVVNGLLAMYAQCKRISEAEY 181
Query: 159 VFDRVL-EKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
+F+ + EK+ V +T+++ GY+Q+G +A+E FR++ + N+YT S L +C ++
Sbjct: 182 LFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVV 277
G +H IVKSG ++ + Q++L+ MY++C +E + + + V+W S +V
Sbjct: 242 ACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIV 301
Query: 278 GLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS-SRAMREVGEQIHAITTKLGME 336
G V+ G A+S+F M + + FT+ SIL + SR ++ H + K G
Sbjct: 302 GCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYA 361
Query: 337 GNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRI 396
K AL+++Y K G +D A VF+ + E D++S +++ NG EAL+LF +
Sbjct: 362 TYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNM 421
Query: 397 KKLGLAPNGVTFISILLACNNAGLVEEGCQLFA-FMKNNHNIELTREHFTCMIDLLGRSK 455
+ G+ P+ + S+L A L+E G Q+ ++K+ L+ + ++ + +
Sbjct: 422 RVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNN--SLVTMYTKCG 479
Query: 456 RFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKI---MRKVLQLAPGDGGTHILL 512
E+A ++ N + D++ W L+ +G +E A++ MR V + PG + +
Sbjct: 480 SLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGP-EHYACM 538
Query: 513 TNLYASAGKWNQVIEM 528
+L+ +G + +V ++
Sbjct: 539 IDLFGRSGDFVKVEQL 554
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 150/278 (53%), Gaps = 1/278 (0%)
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
D F + ++ Y+ ++ DA +F K+ + + ALI+GY +SG EA +F EM
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 196 DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE 255
+KPNEYTL S L C +L + G+ IHG +K+G + V LL MY++C +
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 256 DSVKVFNQL-AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQAC 314
++ +F + ++VTWTS + G QNG A+ FR++ R N +T S+L AC
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 315 SSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVN 374
+S + VG Q+H K G + N +ALI++Y KC ++ AR++ + + D+VS N
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWN 297
Query: 375 SMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISIL 412
SMI + G EAL +F R+ + + + T SIL
Sbjct: 298 SMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 180/371 (48%), Gaps = 11/371 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
+ S++T CA + VH ++ SGF + + LID Y KC + AR L + M
Sbjct: 230 FPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGME 289
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFS-ELGLVRYGR 121
+V+WNSMI V G +A+ ++G M + D +T +I F+ ++
Sbjct: 290 VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIAS 349
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
AH L V G + V +ALVDMYAK M A VF+ ++EKDV+ +TAL+ G +
Sbjct: 350 SAHCLIVKTGYATYKL-VNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHN 408
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
G EAL++F M + P++ AS L++ L GQ +HG +KSG S ++
Sbjct: 409 GSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN 468
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC-SV 300
SL+TMY++C +ED+ +FN + +TWT +VG +NG E A F M +
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGI 528
Query: 301 SPNPFTLSSILQACSSRAMREVGE--QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+P P AC G+ ++ + ++ +E + A++ K GN++
Sbjct: 529 TPGPEHY-----ACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENG 583
Query: 359 RSVFDVLTELD 369
L EL+
Sbjct: 584 ERAAKTLMELE 594
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/608 (32%), Positives = 338/608 (55%), Gaps = 52/608 (8%)
Query: 116 LVRYGRRAHGLAVVLGLE-VLDVFVASALVDMYAKFDKMRDAHLVFDRVL--EKDVVLFT 172
+R G+ H + GL+ ++++AL YA +M A +FD + EKD V +T
Sbjct: 21 FLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWT 80
Query: 173 ALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKS 232
L++ +++ GL ++++F EM +RV+ ++ ++ C L D Q HG VK
Sbjct: 81 TLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM 140
Query: 233 GLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVF 292
G+ + V +L+ MY +C +V + ++F +L S V+WT + +V+ E VF
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 293 REM--------------------------------IRCSVSPNPFTLSSILQACSSRAMR 320
EM RC N TL S+L AC+
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNL 260
Query: 321 EVGEQIHAITTK----LGMEGNKD---AGAALINLYGKCGNVDKARSVFDVLTELDLVSV 373
VG +H K +G E + D G AL+++Y KCGN+D + +VF ++ + ++V+
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTW 320
Query: 374 NSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKN 433
N++ A +G G + +F ++ + + P+ +TF ++L AC+++G+V+EG + F ++
Sbjct: 321 NALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF 379
Query: 434 NHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAE 492
+ +E +H+ CM+DLLGR+ EEA +L+ E+ P+ V+ +LL +C +HG++E+AE
Sbjct: 380 -YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAE 438
Query: 493 KIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREV 552
+I R+++Q++PG+ IL++N+Y + G+ + ++ ++R ++K P S + V+ V
Sbjct: 439 RIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSV 498
Query: 553 HTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQ----DLHEEKKMSSLYYHS 608
H F +GD SHPR EI+ L+E+IE+ ++ GY PD ++ DL E+K +L HS
Sbjct: 499 HRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDL--EEKEQALCCHS 556
Query: 609 EKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGG 668
EKLA+ F L +T +T + +FKNLR+C DCHS +K V+ + R+II RD RFH FKGG
Sbjct: 557 EKLAVCFGLLET-KPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGG 615
Query: 669 LCSCKDYW 676
CSC DYW
Sbjct: 616 SCSCSDYW 623
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 228/457 (49%), Gaps = 58/457 (12%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGF-----SYCLLGHKLIDGYIKCGSVAEARKLFDEM 61
L+ CAH L + +HA + +SG SY L + L Y G + A+KLFDE+
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSY--LSNALFQFYASSGEMVTAQKLFDEI 69
Query: 62 P--ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
P E+ V W +++S+ +G +++L+ M + V D + +F ++L + +
Sbjct: 70 PLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGF 129
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAK----------FDKMRDAHLV---------- 159
++ HG+AV +G+ + V V +AL+DMY K F+++ + +V
Sbjct: 130 AQQGHGVAVKMGV-LTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVV 188
Query: 160 -----------FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKP-NEYTLA 207
F + E++ V +T ++AGY +G E LE+ EMV R N TL
Sbjct: 189 KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLC 248
Query: 208 STLASCGNLGDSVNGQLIHGFIVKS----GLESF---VASQTSLLTMYSRCSMVEDSVKV 260
S L++C G+ V G+ +H + +K G E+ V T+L+ MY++C ++ S+ V
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 261 FNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMR 320
F + + VTW + GL +G+ + + +F +MIR V P+ T +++L ACS +
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIV 367
Query: 321 EVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF-DVLTELDLVSVNSMIYA 379
+ G + G+E D A +++L G+ G +++A + ++ + V + S++ +
Sbjct: 368 DEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 380 YAQNGFGYEALQLFKRIKK--LGLAPNGVTFISILLA 414
+ +G +++ +RIK+ + ++P G T IL++
Sbjct: 428 CSVHG----KVEIAERIKRELIQMSP-GNTEYQILMS 459
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 51/234 (21%)
Query: 1 MNFYS--SLITQCAHTKSLTTLRAVHAHVI--------SSGFSYCLLGHKLIDGYIKCGS 50
+NF + S+++ CA + +L R VH + + + + ++G L+D Y KCG+
Sbjct: 242 LNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGN 301
Query: 51 VAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKA 110
+ + +F M +R++VTWN++ S HGK + ++++ M+ E V PD TF+A+ A
Sbjct: 302 IDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSA 360
Query: 111 FSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVL 170
S G+V G R GLE VD YA
Sbjct: 361 CSHSGIVDEGWRCFHSLRFYGLE--------PKVDHYA---------------------- 390
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQL 224
++ ++GL EA + REM V PNE L S L SC SV+G++
Sbjct: 391 --CMVDLLGRAGLIEEAEILMREM---PVPPNEVVLGSLLGSC-----SVHGKV 434
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 299/528 (56%), Gaps = 3/528 (0%)
Query: 151 DKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
+ M A +F + + F +I GY EAL + EM+ R +P+ +T L
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
+C L G+ IHG + K GLE+ V Q SL+ MY RC +E S VF +L +
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAI 329
+W+S V G + +FR M ++ + S L AC++ +G IH
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA 389
+ E N +L+++Y KCG +DKA +F + + + ++ ++MI A +G G A
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 390 LQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMID 449
L++F ++ K GL P+ V ++S+L AC+++GLV+EG ++FA M +E T EH+ C++D
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 450 LLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGT 508
LLGR+ EEA I + + V+WRT L+ CR+ IE+ + +++L+L+ + G
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGD 439
Query: 509 HILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEI 568
++L++NLY+ W+ V +T I LK++P S V++ + H F++ D SHP+ EI
Sbjct: 440 YLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEI 499
Query: 569 FDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIR 628
+ MLH++ + K GYSPD +L ++ EE+K L HS+K+AIAF L T + I+
Sbjct: 500 YKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYT-PPGSIIK 558
Query: 629 IFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
I +NLR+C DCH++ K ++++ R+I+ RD RFH FKGG CSCKDYW
Sbjct: 559 IARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 171/311 (54%), Gaps = 3/311 (0%)
Query: 50 SVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFK 109
S+ A +F + + +N+MI +V+ ++A+ Y M+ G PD +T+ + K
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 110 AFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVV 169
A + L +R G++ HG LGLE DVFV ++L++MY + +M + VF+++ K
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEA-DVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 170 LFTALIAGYAQSGLDGEALEVFREMV-DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGF 228
++++++ A G+ E L +FR M + +K E + S L +C N G G IHGF
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 229 IVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVA 288
++++ E + QTSL+ MY +C ++ ++ +F ++ +++T+++ + GL +G E A
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 289 VSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG-MEGNKDAGAALIN 347
+ +F +MI+ + P+ S+L ACS + + G ++ A K G +E + L++
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 348 LYGKCGNVDKA 358
L G+ G +++A
Sbjct: 380 LLGRAGLLEEA 390
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 170/358 (47%), Gaps = 15/358 (4%)
Query: 2 NF-YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFD 59
NF Y L+ C KS+ + +H V G + + LI+ Y +CG + + +F+
Sbjct: 132 NFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFE 191
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP--DAYTFSAIFKAFSELGLV 117
++ + +W+SM+SA G + + L+ M E L ++ SA+ A + G +
Sbjct: 192 KLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALL-ACANTGAL 250
Query: 118 RYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAG 177
G HG ++ + L++ V ++LVDMY K + A +F ++ +++ + ++A+I+G
Sbjct: 251 NLGMSIHGF-LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISG 309
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG-LES 236
A G AL +F +M+ ++P+ S L +C + G G+ + ++K G +E
Sbjct: 310 LALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEP 369
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH-VTWTSFVVGLVQNGREEVAVSVFREM 295
L+ + R ++E++++ + + V W +F+ E+ +E+
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQEL 429
Query: 296 IRCSV-SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD-AGAALINLYGK 351
++ S +P + L S L + ++ + + T++ ++G K G +++ L GK
Sbjct: 430 LKLSSHNPGDYLLISNLY-----SQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGK 482
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 330/616 (53%), Gaps = 8/616 (1%)
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP-DAYTFSAIFKAFSELGLVRYGRRAHG 125
VT S I V + ++A EL+ + + T+ A+ +A L +R +R +G
Sbjct: 88 VTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYG 147
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG 185
+ G E + ++ + ++ M+ K + DA +FD + E+++ + ++I+G+ G
Sbjct: 148 FMMSNGFEP-EQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYV 206
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
EA E+F+ M + +T A L + LG G+ +H +K G+ L+
Sbjct: 207 EAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLI 266
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
MYS+C +ED+ F + + V W + + G +G E A+ + +M VS + F
Sbjct: 267 DMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQF 326
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
TLS +++ + A E+ +Q HA + G E A AL++ Y K G VD AR VFD L
Sbjct: 327 TLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKL 386
Query: 366 TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGC 425
+++S N+++ YA +G G +A++LF+++ +APN VTF+++L AC +GL E+G
Sbjct: 387 PRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGW 446
Query: 426 QLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRI 484
++F M H I+ H+ CMI+LLGR +EA I V +W LLNACR+
Sbjct: 447 EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRM 506
Query: 485 HGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARS 544
+E+ + K+ + P G ++++ N+Y S GK + + T+ L PA +
Sbjct: 507 QENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACT 566
Query: 545 WVDVDREVHTFMAGD----MSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKK 600
WV+V + H+F++GD + +I+ + EL+E+ GYS + + +L D+ E+++
Sbjct: 567 WVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEE 626
Query: 601 MSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSK 660
YHSEKLAIA+ L T ++I +N R+C +CH ++F++L+TGR+++ RD+
Sbjct: 627 ERVGRYHSEKLAIAYGLVNT-PEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDAS 685
Query: 661 RFHHFKGGLCSCKDYW 676
RFHHFK G CSC YW
Sbjct: 686 RFHHFKEGKCSCGGYW 701
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 202/357 (56%), Gaps = 3/357 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y +L+ C KS+ ++ V+ ++S+GF + ++++ ++KCG + +AR+LFDE+P
Sbjct: 126 YDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIP 185
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER++ ++ S+IS V+ G +A EL+ M E + +TF+ + +A + LG + G++
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ 245
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H A+ LG+ V + FV+ L+DMY+K + DA F+ + EK V + +IAGYA G
Sbjct: 246 LHVCALKLGV-VDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
EAL + +M D V +++TL+ + L + H ++++G ES + + T
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+L+ YS+ V+ + VF++L + ++W + + G +GR AV +F +MI +V+P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKL-GMEGNKDAGAALINLYGKCGNVDKA 358
N T ++L AC+ + E G +I +++ G++ A +I L G+ G +D+A
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEA 481
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 333 bits (854), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 293/529 (55%), Gaps = 40/529 (7%)
Query: 187 ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLT 246
+ V+ M + RV P+ +T L S N GQ H I+ GL+ +TSLL
Sbjct: 46 PISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLN 105
Query: 247 MYSRCS-------------------------------MVEDSVKVFNQLAYASHVTWTSF 275
MYS C +++D+ K+F+++ + ++W+
Sbjct: 106 MYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCL 165
Query: 276 VVGLVQNGREEVAVSVFREMI-----RCSVSPNPFTLSSILQACSSRAMREVGEQIHAIT 330
+ G V G+ + A+ +FREM V PN FT+S++L AC E G+ +HA
Sbjct: 166 INGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI 225
Query: 331 TKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL-TELDLVSVNSMIYAYAQNGFGYEA 389
K +E + G ALI++Y KCG++++A+ VF+ L ++ D+ + ++MI A G E
Sbjct: 226 DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDEC 285
Query: 390 LQLFKRIKKL-GLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMI 448
QLF + + PN VTF+ IL AC + GL+ EG F M I + +H+ CM+
Sbjct: 286 FQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMV 345
Query: 449 DLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGG 507
DL GRS +EA I + PDV++W +LL+ R+ G+I+ E ++++++L P + G
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSG 405
Query: 508 THILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHE 567
++LL+N+YA G+W +V ++ + + K P S+V+V+ VH F+ GD S +
Sbjct: 406 AYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESER 465
Query: 568 IFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAI 627
I+ ML E++++ + GY DT+ VL DL+E+ K +L YHSEKLAIAF L KT T +
Sbjct: 466 IYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKT-RPGTPV 524
Query: 628 RIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
RI KNLR+CGDCH +K ++ L R+I+ RD RFHHF+ G CSC+D+W
Sbjct: 525 RIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 160/334 (47%), Gaps = 43/334 (12%)
Query: 69 WNSMISAHVSHGKSKQ---AVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
WN +I A V + S Q + +Y M V PD +TF + +F + G+R H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMR------------------------------- 154
++ GL+ D FV ++L++MY+ +R
Sbjct: 87 QILLFGLDK-DPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 155 DAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR-----VKPNEYTLAST 209
DA +FD + E++V+ ++ LI GY G EAL++FREM + V+PNE+T+++
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 210 LASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH 269
L++CG LG G+ +H +I K +E + T+L+ MY++C +E + +VFN L
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 270 V-TWTSFVVGLVQNGREEVAVSVFREMIRC-SVSPNPFTLSSILQACSSRAMREVGEQ-I 326
V +++ + L G + +F EM +++PN T IL AC R + G+
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 327 HAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
+ + G+ + +++LYG+ G + +A S
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAES 359
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 158/323 (48%), Gaps = 17/323 (5%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-- 96
+ +++ Y K G + +ARKLFDEMPER++++W+ +I+ +V GK K+A++L+ M +
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 97 ---VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKM 153
V P+ +T S + A LG + G+ H +E+ D+ + +AL+DMYAK +
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEI-DIVLGTALIDMYAKCGSL 250
Query: 154 RDAHLVFDRV-LEKDVVLFTALIAGYAQSGLDGEALEVFREM-VDRRVKPNEYTLASTLA 211
A VF+ + +KDV ++A+I A GL E ++F EM + PN T L
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 212 SCGNLGDSVNGQLIHGFIVKS-GLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
+C + G G+ +++ G+ + ++ +Y R +++++ + V
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 271 -TWTSFVVGLVQNGREEVAVSVFREMIRC-SVSPNPFTLSSILQACSSRAMREVGEQIHA 328
W S + G G + + +I ++ + L S + A + R M ++
Sbjct: 371 LIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWM-----EVKC 425
Query: 329 ITTKLGMEG-NKDAGAALINLYG 350
I ++ ++G NK G + + + G
Sbjct: 426 IRHEMEVKGINKVPGCSYVEVEG 448
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 41/255 (16%)
Query: 272 WTSFVVGLVQN---GREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA 328
W + +V N + +SV+ M VSP+ T +L + + +G++ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 329 ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGF--- 385
G++ + +L+N+Y CG++ A+ VFD DL + NS++ AYA+ G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 386 ---------------------GY-------EALQLFKRIK-----KLGLAPNGVTFISIL 412
GY EAL LF+ ++ + + PN T ++L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 413 LACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPD 471
AC G +E+G + A++ H +E+ T +ID+ + E A + N + + D
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYH-VEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 472 VVLWRTLLNACRIHG 486
V + ++ ++G
Sbjct: 266 VKAYSAMICCLAMYG 280
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEM-P 62
S++++ C +L + VHA++ +LG LID Y KCGS+ A+++F+ +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLV-EGVLPDAYTFSAIFKAFSELGLVRYGR 121
++ + +++MI +G + + +L+ M + + P++ TF I A GL+ G+
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAH-LVFDRVLEKDVVLFTALIAG 177
+ + + +VD+Y + +++A + +E DV+++ +L++G
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 316/576 (54%), Gaps = 5/576 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
++ + C+ +++ R +H V+ G + + L+ Y KCG V EA +F +
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
++ + WN+M++A+ + A++L+G M + VLPD++T S + S LGL YG+
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H ++ + SAL+ +Y+K DA+LVF + EKD+V + +LI+G ++G
Sbjct: 395 VHAELFKRPIQSTST-IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNG 453
Query: 183 LDGEALEVFREMVDR--RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
EAL+VF +M D +KP+ + S +C L G +HG ++K+GL V
Sbjct: 454 KFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFV 513
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+SL+ +YS+C + E ++KVF ++ + V W S + +N E+++ +F M+ +
Sbjct: 514 GSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGI 573
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
P+ +++S+L A SS A G+ +H T +LG+ + ALI++Y KCG A +
Sbjct: 574 FPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAEN 633
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
+F + L++ N MIY Y +G AL LF +KK G +P+ VTF+S++ ACN++G
Sbjct: 634 IFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGF 693
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLL 479
VEEG +F FMK ++ IE EH+ M+DLLGR+ EEA I + D +W LL
Sbjct: 694 VEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLL 753
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
+A R H +E+ K+L++ P G T++ L NLY AG N+ ++ +++ L K
Sbjct: 754 SASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHK 813
Query: 540 SPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHEL 575
P SW++V + F +G S P EIF++L+ L
Sbjct: 814 QPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 240/490 (48%), Gaps = 15/490 (3%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ SL+ C+ +L+ + +H V+ G+ Y + L++ Y+KCG + A ++FD
Sbjct: 63 FPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 122
Query: 63 E-------RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELG 115
+ R + WNSMI + + K+ V + MLV GV PDA++ S + + G
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
Query: 116 LVRY--GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK-DVVLFT 172
R G++ HG + L+ D F+ +AL+DMY KF DA VF + +K +VVL+
Sbjct: 183 NFRREEGKQIHGFMLRNSLDT-DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 173 ALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKS 232
+I G+ SG+ +L+++ + VK + L +C +S G+ IH +VK
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 233 GLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVF 292
GL + TSLL+MYS+C MV ++ VF+ + W + V +N A+ +F
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 293 REMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKC 352
M + SV P+ FTLS+++ CS + G+ +HA K ++ +AL+ LY KC
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKC 421
Query: 353 GNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK--KLGLAPNGVTFIS 410
G A VF + E D+V+ S+I +NG EAL++F +K L P+ S
Sbjct: 422 GCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 411 ILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNP 470
+ AC + G Q+ M + L + +IDL + E A + ++
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Query: 471 DVVLWRTLLN 480
++V W ++++
Sbjct: 541 NMVAWNSMIS 550
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 221/439 (50%), Gaps = 19/439 (4%)
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVLP---DAYTFSAIFKAFSELGLVRYGRRAHGL 126
NS I A + G+ QA+ LY +G P +TF ++ KA S L + YG+ HG
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKH--DGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFD-------RVLEKDVVLFTALIAGYA 179
VVLG D F+A++LV+MY K + A VFD V +DV ++ ++I GY
Sbjct: 86 VVVLGWR-YDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLA---STLASCGNLGDSVNGQLIHGFIVKSGLES 236
+ E + FR M+ V+P+ ++L+ S + GN G+ IHGF++++ L++
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRRE-EGKQIHGFMLRNSLDT 203
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT-WTSFVVGLVQNGREEVAVSVFREM 295
+T+L+ MY + + D+ +VF ++ S+V W +VG +G E ++ ++
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA 263
Query: 296 IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNV 355
SV + + L ACS G QIH K+G+ + +L+++Y KCG V
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323
Query: 356 DKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLAC 415
+A +VF + + L N+M+ AYA+N +GY AL LF +++ + P+ T +++ C
Sbjct: 324 GEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC 383
Query: 416 NNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLW 475
+ GL G + A + I+ T + ++ L + +A ++ + D+V W
Sbjct: 384 SVLGLYNYGKSVHAELF-KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAW 442
Query: 476 RTLLNACRIHGEIEMAEKI 494
+L++ +G+ + A K+
Sbjct: 443 GSLISGLCKNGKFKEALKV 461
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 20/230 (8%)
Query: 265 AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP---NPFTLSSILQACSSRAMRE 321
+Y S + S + L+Q G A+ ++ + SP + FT S+L+ACS+
Sbjct: 20 SYISPASINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLS 77
Query: 322 VGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE-------LDLVSVN 374
G+ IH LG + +L+N+Y KCG +D A VFD ++ D+ N
Sbjct: 78 YGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWN 137
Query: 375 SMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTF-ISILLACNNAGL-VEEGCQLFAFMK 432
SMI Y + E + F+R+ G+ P+ + I + + C EEG Q+ FM
Sbjct: 138 SMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFML 197
Query: 433 NNHNIELTREHF--TCMIDLLGRSKRFEEAAMLINEVTN-PDVVLWRTLL 479
N L + F T +ID+ + +A + E+ + +VVLW ++
Sbjct: 198 RN---SLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 331 bits (849), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 328/575 (57%), Gaps = 11/575 (1%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYC-LLGHKLIDGYIKCGSVAEARKLFDEMPER 64
S++ CA L R+VH + F L + L+ Y KCG + + ++F+++ ++
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK 266
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
+ V+W +MIS++ S++A+ + M+ G+ P+ T ++ + +GL+R G+ H
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLD 184
G AV L+ ++ ALV++YA+ K+ D V V ++++V + +LI+ YA G+
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMV 386
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL-ESFVASQTS 243
+AL +FR+MV +R+KP+ +TLAS++++C N G G+ IHG ++++ + + FV Q S
Sbjct: 387 IQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFV--QNS 444
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
L+ MYS+ V+ + VFNQ+ + S VTW S + G QNG A+S+F M + N
Sbjct: 445 LIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMN 504
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD--AGAALINLYGKCGNVDKARSV 361
T +++QACSS E G+ +H KL + G KD ALI++Y KCG+++ A +V
Sbjct: 505 EVTFLAVIQACSSIGSLEKGKWVHH---KLIISGLKDLFTDTALIDMYAKCGDLNAAETV 561
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F ++ +VS +SMI AY +G A+ F ++ + G PN V F+++L AC ++G V
Sbjct: 562 FRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 621
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN-PDVVLWRTLLN 480
EEG F MK + + EHF C IDLL RS +EA I E+ D +W +L+N
Sbjct: 622 EEGKYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVN 680
Query: 481 ACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKS 540
CRIH ++++ + I + + D G + LL+N+YA G+W + +++ ++ LKK
Sbjct: 681 GCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKV 740
Query: 541 PARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHEL 575
P S +++D++V F AG+ + + EI+ L L
Sbjct: 741 PGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 289/533 (54%), Gaps = 17/533 (3%)
Query: 4 YSSLITQCAHTKS-LTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEM 61
+ S++ CA ++ L+ VH +I G ++ L+ Y + G++++A K+FD M
Sbjct: 103 FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM 162
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
P R +V W++++S+ + +G+ +A+ ++ M+ +GV PDA T ++ + +ELG +R R
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
HG + + LD + ++L+ MY+K + + +F+++ +K+ V +TA+I+ Y +
Sbjct: 223 SVHG-QITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE-SFVAS 240
+AL F EM+ ++PN TL S L+SCG +G G+ +HGF V+ L+ ++ +
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+L+ +Y+ C + D V ++ + V W S + G A+ +FR+M+ +
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHA--ITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
P+ FTL+S + AC + + +G+QIH I T + E ++ +LI++Y K G+VD A
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN---SLIDMYSKSGSVDSA 458
Query: 359 RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNA 418
+VF+ + +V+ NSM+ ++QNG EA+ LF + L N VTF++++ AC++
Sbjct: 459 STVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSI 518
Query: 419 GLVEEGCQLFAFMKNNHNIELTREHF--TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWR 476
G +E+G ++ + I ++ F T +ID+ + A + +++ +V W
Sbjct: 519 GSLEKG----KWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS 574
Query: 477 TLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMK 529
+++NA +HG I A ++++ G ++ N+ ++ G V E K
Sbjct: 575 SMINAYGMHGRIGSAISTFNQMVE--SGTKPNEVVFMNVLSACGHSGSVEEGK 625
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 194/399 (48%), Gaps = 8/399 (2%)
Query: 104 FSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV 163
+ +F++ S L LV + H +V G D + L++ YA + LVF+
Sbjct: 4 YMPLFRSCSSLRLVS---QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 164 LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGD--SVN 221
D ++ LI L A++++ +V + +++ S L +C + SV
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120
Query: 222 GQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQ 281
G+ +HG I+K G++ +TSLL MY + + D+ KVF+ + V W++ V ++
Sbjct: 121 GK-VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 282 NGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDA 341
NG A+ +F+ M+ V P+ T+ S+++ C+ + +H T+ + ++
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 342 GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGL 401
+L+ +Y KCG++ + +F+ + + + VS +MI +Y + F +AL+ F + K G+
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 402 APNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT-CMIDLLGRSKRFEEA 460
PN VT S+L +C GL+ EG + F ++ E + +++L + +
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAV-RRELDPNYESLSLALVELYAECGKLSDC 358
Query: 461 AMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVL 499
++ V++ ++V W +L++ G + A + R+++
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMV 397
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 11/279 (3%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
+S I+ C + + + +H HVI + S + + LID Y K GSV A +F+++ R
Sbjct: 409 ASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR 468
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
+VTWNSM+ +G S +A+ L+ M + + TF A+ +A S +G + G+ H
Sbjct: 469 SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH 528
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLD 184
++ GL+ D+F +AL+DMYAK + A VF + + +V ++++I Y G
Sbjct: 529 HKLIISGLK--DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRI 586
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQ----LIHGFIVKSGLESFVAS 240
G A+ F +MV+ KPNE + L++CG+ G G+ L+ F V E F
Sbjct: 587 GSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFAC- 645
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAY-ASHVTWTSFVVG 278
+ + SR ++++ + ++ + A W S V G
Sbjct: 646 ---FIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
+ ++I C+ SL + VH +I SG LID Y KCG + A +F M
Sbjct: 508 FLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSS 567
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
R IV+W+SMI+A+ HG+ A+ + M+ G P+ F + A G V G+
Sbjct: 568 RSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYY 627
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAH 157
L G+ A +D+ ++ +++A+
Sbjct: 628 FNLMKSFGVSPNSEHFA-CFIDLLSRSGDLKEAY 660
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/554 (33%), Positives = 296/554 (53%), Gaps = 34/554 (6%)
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
A +VFD D L+ +I G++ S +L +++ M+ N YT S L +C N
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMY----------------------SRCSM 253
L IH I K G E+ V + SL+ Y S S+
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 254 VEDSVK---------VFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNP 304
++ VK +F ++A + ++WT+ + G VQ + A+ +F EM V P+
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 305 FTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDV 364
+L++ L AC+ E G+ IH+ K + + G LI++Y KCG +++A VF
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 365 LTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEG 424
+ + + + ++I YA +G G EA+ F ++K+G+ PN +TF ++L AC+ GLVEEG
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 425 CQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACR 483
+F M+ ++N++ T EH+ C++DLLGR+ +EA I E+ P+ V+W LL ACR
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 484 IHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPAR 543
IH IE+ E+I ++ + P GG ++ N++A KW++ E + +++ + K P
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 544 SWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDL-HEEKKMS 602
S + ++ H F+AGD SHP +I + K + GY P+ +L DL ++++ +
Sbjct: 488 STISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREA 547
Query: 603 SLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRF 662
++ HSEKLAI + L KT T IRI KNLRVC DCH K ++ + RDI+ RD RF
Sbjct: 548 IVHQHSEKLAITYGLIKT-KPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRF 606
Query: 663 HHFKGGLCSCKDYW 676
HHF+ G CSC DYW
Sbjct: 607 HHFRDGKCSCGDYW 620
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 191/398 (47%), Gaps = 46/398 (11%)
Query: 2 NFYSSL--ITQCAHTKSLTTLRAVHAHVISSGF---SYCLLGHKLIDGYIKCGS---VAE 53
N Y ++ + +C+ + L + +HA ++ +G SY + K + I S +
Sbjct: 13 NLYETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAIT--KFLSFCISSTSSDFLPY 67
Query: 54 ARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSE 113
A+ +FD WN MI + ++++ LY ML +AYTF ++ KA S
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 114 LGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV---------- 163
L + H LG E DV+ ++L++ YA + AHL+FDR+
Sbjct: 128 LSAFEETTQIHAQITKLGYEN-DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 164 ---------------------LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPN 202
EK+ + +T +I+GY Q+ ++ EAL++F EM + V+P+
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 203 EYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFN 262
+LA+ L++C LG G+ IH ++ K+ + L+ MY++C +E++++VF
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 263 QLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREV 322
+ S WT+ + G +G A+S F EM + + PN T +++L ACS + E
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 323 GEQI-HAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
G+ I +++ ++ + +++L G+ G +D+A+
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAK 404
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 151/359 (42%), Gaps = 68/359 (18%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF------------SYCLLG------------- 38
+ SL+ C++ + +HA + G+ SY + G
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP 177
Query: 39 -------HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGN 91
+ +I GY+K G + A LF +M E++ ++W +MIS +V +K+A++L+
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 92 MLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFD 151
M V PD + + A ++LG + G+ H + +D + L+DMYAK
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIR-MDSVLGCVLIDMYAKCG 296
Query: 152 KMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
+M +A VF + +K V +TALI+GYA G EA+ F EM +KPN T + L
Sbjct: 297 EMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
Query: 212 SCGNLGDSVNGQLIHGFIVKS-GLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
+C G G+LI + + L+ + ++ + R +++++ + ++
Sbjct: 357 ACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP----- 411
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAI 329
+ PN ++L+AC E+GE+I I
Sbjct: 412 -----------------------------LKPNAVIWGALLKACRIHKNIELGEEIGEI 441
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 299/555 (53%), Gaps = 3/555 (0%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL 98
+ L+ Y KCG + +A KLFDEMP R +++ N + + + +++ L ML G
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF 153
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
D T + + + H LA++ G + ++ V + L+ Y K
Sbjct: 154 -DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDK-EISVGNKLITSYFKCGCSVSGRG 211
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGD 218
VFD + ++V+ TA+I+G ++ L + L +F M V PN T S LA+C
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 219 SVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVG 278
V GQ IH + K G+ES + +++L+ MYS+C +ED+ +F V+ T +VG
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 279 LVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGN 338
L QNG EE A+ F M++ V + +S++L +G+Q+H++ K GN
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 339 KDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK 398
LIN+Y KCG++ +++VF + + + VS NSMI A+A++G G AL+L++ +
Sbjct: 392 TFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT 451
Query: 399 LGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFE 458
L + P VTF+S+L AC++ GL+++G +L MK H IE EH+TC+ID+LGR+ +
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLK 511
Query: 459 EAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYA 517
EA I+ + PD +W+ LL AC HG+ E+ E ++ Q AP HIL+ N+Y+
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYS 571
Query: 518 SAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIE 577
S GKW + + ++ + + K S ++++ + H+F+ D HP+A I+D+L L
Sbjct: 572 SRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFP 631
Query: 578 KAKTLGYSPDTRFVL 592
GY PD RF+L
Sbjct: 632 VMVDEGYRPDKRFIL 646
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 182/362 (50%), Gaps = 5/362 (1%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERH 65
+++ C + + +HA I SG+ + +G+KLI Y KCG R +FD M R+
Sbjct: 161 VLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRN 220
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
++T ++IS + + + + L+ M V P++ T+ + A S + G++ H
Sbjct: 221 VITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHA 280
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG 185
L G+E ++ + SAL+DMY+K + DA +F+ E D V T ++ G AQ+G +
Sbjct: 281 LLWKYGIES-ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEE 339
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN-GQLIHGFIVKSGLESFVASQTSL 244
EA++ F M+ V+ + +++ L + +S+ G+ +H ++K L
Sbjct: 340 EAIQFFIRMLQAGVEIDANVVSAVLG-VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGL 398
Query: 245 LTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNP 304
+ MYS+C + DS VF ++ ++V+W S + ++G A+ ++ EM V P
Sbjct: 399 INMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTD 458
Query: 305 FTLSSILQACSSRAMREVG-EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
T S+L ACS + + G E ++ + G+E + +I++ G+ G + +A+S D
Sbjct: 459 VTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFID 518
Query: 364 VL 365
L
Sbjct: 519 SL 520
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 182/377 (48%), Gaps = 20/377 (5%)
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR 198
V ++L+ +YAK K+ DA +FD + +DV+ + G+ ++ + + M+
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 199 VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSV 258
+ TL L+ C + ++IH + SG + ++ L+T Y +C
Sbjct: 152 -GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
VF+ +++ + +T T+ + GL++N E + +F M R V PN T S L ACS
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
G+QIHA+ K G+E +AL+++Y KCG+++ A ++F+ TE+D VS+ ++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 379 AYAQNGFGYEALQLFKRIKKLGL--------APNGVTFISILLACNNAGLVEEGCQLFAF 430
AQNG EA+Q F R+ + G+ A GV+FI N+ GL ++ L
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFID-----NSLGLGKQLHSLVIK 385
Query: 431 MKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEM 490
K + N + +I++ + ++ + + + V W +++ A HG
Sbjct: 386 RKFSGNTFVNNG----LINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLA 441
Query: 491 AEKIMRKV--LQLAPGD 505
A K+ ++ L++ P D
Sbjct: 442 ALKLYEEMTTLEVKPTD 458
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 303/567 (53%), Gaps = 16/567 (2%)
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H L + LG D F + LV Y K ++ A +FD + E +VV +T++I+GY G
Sbjct: 52 HTLTLKLGF-ASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 184 DGEALEVFREM-VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
AL +F++M DR V PNEYT AS +C L +S G+ IH + SGL + +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 243 SLLTMYSRCSMVEDSVKVFNQL-AYASHV-TWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
SL+ MY +C+ VE + +VF+ + Y +V +WTS + QN R A+ +FR
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 301 S--PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
S N F L+S++ ACSS + G+ H + T+ G E N +L+++Y KCG++ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 359 RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNA 418
+F + ++S SMI A A++G G A++LF + + PN VT + +L AC+++
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 419 GLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV---TNPDVVLW 475
GLV EG + + M + + H+TC++D+LGR R +EA L + +LW
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDL 535
LL+A R+HG +E+ + ++++Q +I L+N YA +G W ++ ++
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 536 KLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGY------SPDTR 589
K A SW++ V+ F AGD+S + EI L +L ++ K G+ +
Sbjct: 471 GNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSS 530
Query: 590 FVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLL 649
V D+ EE K + H E+LA+A+ L +T IRI NLR+C DCH K ++ +
Sbjct: 531 SVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGST-IRIMNNLRMCRDCHEAFKLISEI 589
Query: 650 TGRDIIARDSKRFHHFKGGLCSCKDYW 676
R+I+ RD RFH FK G C+C+DYW
Sbjct: 590 VEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 186/327 (56%), Gaps = 13/327 (3%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE-GVLP 99
L+ Y+K + ARKLFDEM E ++V+W S+IS + GK + A+ ++ M + V P
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
+ YTF+++FKA S L R G+ H + GL ++ V+S+LVDMY K + + A V
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLR-RNIVVSSSLVDMYGKCNDVETARRV 188
Query: 160 FDRVL--EKDVVLFTALIAGYAQSGLDGEALEVFREM-----VDRRVKPNEYTLASTLAS 212
FD ++ ++VV +T++I YAQ+ EA+E+FR DR N++ LAS +++
Sbjct: 189 FDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDR---ANQFMLASVISA 245
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
C +LG G++ HG + + G ES TSLL MY++C + + K+F ++ S +++
Sbjct: 246 CSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISY 305
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG-EQIHAITT 331
TS ++ ++G E AV +F EM+ ++PN TL +L ACS + G E + +
Sbjct: 306 TSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAE 365
Query: 332 KLGMEGNKDAGAALINLYGKCGNVDKA 358
K G+ + ++++ G+ G VD+A
Sbjct: 366 KYGVVPDSRHYTCVVDMLGRFGRVDEA 392
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
+S+I+ C+ L + H V G+ S ++ L+D Y KCGS++ A K+F +
Sbjct: 240 ASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC 299
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
++++ SMI A HG + AV+L+ M+ + P+ T + A S GLV G
Sbjct: 300 HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEY 359
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV---LEKDVVLFTALIAGYAQ 180
L V D + +VDM +F ++ +A+ + + E+ +L+ AL++
Sbjct: 360 LSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRL 419
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
G +E+ E R ++ N+ ++ +A
Sbjct: 420 HG----RVEIVSEASKRLIQSNQQVTSAYIA 446
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 14/175 (8%)
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGF 385
+H +T KLG + L+ Y K ++ AR +FD + E ++VS S+I Y G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 386 GYEALQLFKRI-KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN---HNIELTR 441
AL +F+++ + + PN TF S+ AC+ G + A ++ + NI ++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS- 169
Query: 442 EHFTCMIDLLGRSKRFEEAAMLINEVT--NPDVVLWRTLLNA----CRIHGEIEM 490
+ ++D+ G+ E A + + + +VV W +++ A R H IE+
Sbjct: 170 ---SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIEL 221
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 328 bits (841), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 297/543 (54%), Gaps = 5/543 (0%)
Query: 37 LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNM-LVE 95
+G LI YIKCG + EA ++FDE+ + IVTW+SM+S +G QAVE + M +
Sbjct: 98 VGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMAS 157
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
V PD T + A ++L R GR HG + G D+ + ++L++ YAK ++
Sbjct: 158 DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSN-DLSLVNSLLNCYAKSRAFKE 216
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
A +F + EKDV+ ++ +IA Y Q+G EAL VF +M+D +PN T+ L +C
Sbjct: 217 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 276
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
D G+ H ++ GLE+ V T+L+ MY +C E++ VF+++ V+W +
Sbjct: 277 AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVAL 336
Query: 276 VVGLVQNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG 334
+ G NG ++ F M+ + P+ + +L +CS E + H+ K G
Sbjct: 337 ISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYG 396
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFK 394
+ N GA+L+ LY +CG++ A VF+ + D V S+I Y +G G +AL+ F
Sbjct: 397 FDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFN 456
Query: 395 R-IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
+K + PN VTF+SIL AC++AGL+ EG ++F M N++ + EH+ ++DLLGR
Sbjct: 457 HMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGR 516
Query: 454 SKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILL 512
+ A + + +P + TLL ACRIH EMAE + +K+ +L G ++L+
Sbjct: 517 VGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLM 576
Query: 513 TNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
+N+Y G+W V +++ +++ +KK A S +++ R+VH F+A D HP ++ +L
Sbjct: 577 SNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLL 636
Query: 573 HEL 575
EL
Sbjct: 637 KEL 639
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 233/446 (52%), Gaps = 9/446 (2%)
Query: 47 KCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSA 106
K S +AR++F EM +R + WN+++ + + ++ + + +M + PD +T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 107 IFKAFSELGLVRYGRRAHGLA---VVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV 163
KA EL V YG HG V LG D++V S+L+ MY K +M +A +FD +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGS---DLYVGSSLIYMYIKCGRMIEALRMFDEL 122
Query: 164 LEKDVVLFTALIAGYAQSGLDGEALEVFREMV-DRRVKPNEYTLASTLASCGNLGDSVNG 222
+ D+V ++++++G+ ++G +A+E FR MV V P+ TL + +++C L +S G
Sbjct: 123 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLG 182
Query: 223 QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQN 282
+ +HGF+++ G + ++ SLL Y++ +++V +F +A ++W++ + VQN
Sbjct: 183 RCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 242
Query: 283 GREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAG 342
G A+ VF +M+ PN T+ +LQAC++ E G + H + + G+E
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 343 AALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFK-RIKKLGL 401
AL+++Y KC + ++A +VF + D+VS ++I + NG + +++ F + +
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 402 APNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAA 461
P+ + + +L +C+ G +E+ + F + + +++L R A+
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 421
Query: 462 MLINEVTNPDVVLWRTLLNACRIHGE 487
+ N + D V+W +L+ IHG+
Sbjct: 422 KVFNGIALKDTVVWTSLITGYGIHGK 447
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 193/357 (54%), Gaps = 5/357 (1%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPER 64
+L++ C + R VH VI GFS L L + L++ Y K + EA LF + E+
Sbjct: 168 TLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK 227
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
+++W+++I+ +V +G + +A+ ++ +M+ +G P+ T + +A + + GR+ H
Sbjct: 228 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH 287
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLD 184
LA+ GLE +V V++ALVDMY K +A+ VF R+ KDVV + ALI+G+ +G+
Sbjct: 288 ELAIRKGLET-EVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 185 GEALEVFREM-VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
++E F M ++ +P+ + L SC LG + H +++K G +S S
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 406
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS-VSP 302
L+ +YSRC + ++ KVFN +A V WTS + G +G+ A+ F M++ S V P
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 466
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAI-TTKLGMEGNKDAGAALINLYGKCGNVDKA 358
N T SIL ACS + G +I + + N + A L++L G+ G++D A
Sbjct: 467 NEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 309/562 (54%), Gaps = 20/562 (3%)
Query: 133 EVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS-GLDGEALEVF 191
E +F+ ++ + + F + A VFD + ++ LI A EA ++
Sbjct: 79 EPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLY 138
Query: 192 REMVDR-RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSR 250
R+M++R P+++T L +C + G+ +H IVK G V L+ +Y
Sbjct: 139 RKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGS 198
Query: 251 CSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSI 310
C ++ + KVF+++ S V+W S + LV+ G + A+ +FREM R S P+ +T+ S+
Sbjct: 199 CGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSV 257
Query: 311 LQACSSRAMREVGEQIHA-ITTKLGMEGNKDA--GAALINLYGKCGNVDKARSVFDVLTE 367
L AC+ +G HA + K ++ D +LI +Y KCG++ A VF + +
Sbjct: 258 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 317
Query: 368 LDLVSVNSMIYAYAQNGFGYEALQLFKRI--KKLGLAPNGVTFISILLACNNAGLVEEGC 425
DL S N+MI +A +G EA+ F R+ K+ + PN VTF+ +L+ACN+ G V +G
Sbjct: 318 RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Query: 426 QLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAA-MLINEVTNPDVVLWRTLLNACRI 484
Q F M ++ IE EH+ C++DL+ R+ EA M+++ PD V+WR+LL+AC
Sbjct: 378 QYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
Query: 485 HG-EIEMAEKIMRKVLQLAPGD-------GGTHILLTNLYASAGKWNQVIEMKTTIRDLK 536
G +E++E+I R ++ + G ++LL+ +YASA +WN V ++ + +
Sbjct: 438 KGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHG 497
Query: 537 LKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPD-TRFVLQD- 594
++K P S ++++ H F AGD SHP+ +I+ L + ++ +++GY PD ++ L D
Sbjct: 498 IRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDA 557
Query: 595 LHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDI 654
++ K SL HSE+LAIAF L +T IRIFKNLRVC DCH K ++ + +I
Sbjct: 558 TNDGSKEYSLRLHSERLAIAFGLINLPPQT-PIRIFKNLRVCNDCHEVTKLISKVFNTEI 616
Query: 655 IARDSKRFHHFKGGLCSCKDYW 676
I RD RFHHFK G CSC DYW
Sbjct: 617 IVRDRVRFHHFKDGSCSCLDYW 638
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 152/305 (49%), Gaps = 17/305 (5%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ ++ CA+ + + VH ++ GF + + LI Y CG + ARK+FDEMP
Sbjct: 154 FPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP 213
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER +V+WNSMI A V G+ A++L+ M PD YT ++ A + LG + G
Sbjct: 214 ERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTW 272
Query: 123 AHG-LAVVLGLEV-LDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
AH L ++V +DV V ++L++MY K +R A VF + ++D+ + A+I G+A
Sbjct: 273 AHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFAT 332
Query: 181 SGLDGEALEVFREMVDRR--VKPNEYTLASTLASCGNLGDSVNGQ-----LIHGFIVKSG 233
G EA+ F MVD+R V+PN T L +C + G G+ ++ + ++
Sbjct: 333 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPA 392
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVK-VFNQLAYASHVTWTSFVVGLVQNGRE-EVAVSV 291
LE + ++ + +R + +++ V + V W S + + G E++ +
Sbjct: 393 LEHY----GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEI 448
Query: 292 FREMI 296
R +I
Sbjct: 449 ARNII 453
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 327 bits (837), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/564 (32%), Positives = 314/564 (55%), Gaps = 9/564 (1%)
Query: 15 KSLTTLRAVHAHVIS-SGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMI 73
+S T R HA V+ S F + L+ Y K G V + K+F MPER+ TW++M+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 74 SAHVSHGKSKQAVELYGNML---VEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVL 130
S + + G+ ++A++++ L EG D Y F+A+ + + V GR+ H + +
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKN 250
Query: 131 GLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEV 190
GL V +++ALV MY+K + + +A +FD +++ + ++A++ GY+Q+G EA+++
Sbjct: 251 GLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 191 FREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSR 250
F M +KP+EYT+ L +C ++ G+ +H F++K G E + + T+L+ MY++
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Query: 251 CSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSI 310
+ D+ K F+ L WTS + G VQN E A+ ++R M + PN T++S+
Sbjct: 370 AGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASV 429
Query: 311 LQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDL 370
L+ACSS A E+G+Q+H T K G G+AL +Y KCG+++ VF D+
Sbjct: 430 LKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDV 489
Query: 371 VSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF 430
VS N+MI + NG G EAL+LF+ + G+ P+ VTF++I+ AC++ G VE G F
Sbjct: 490 VSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNM 549
Query: 431 MKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPD--VVLWRTLLNACRIHGEI 488
M + ++ +H+ CM+DLL R+ + +EA I E N D + LWR LL+AC+ HG+
Sbjct: 550 MSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFI-ESANIDHGLCLWRILLSACKNHGKC 608
Query: 489 EMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDV 548
E+ K++ L + T++ L+ +Y + G+ V + +R + K SW+++
Sbjct: 609 ELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIEL 668
Query: 549 DREVHTFMAGDMSHPRAHEIFDML 572
+ H F+ GD HP E D++
Sbjct: 669 KNQYHVFVVGDTMHPMIEETKDLV 692
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/506 (30%), Positives = 267/506 (52%), Gaps = 10/506 (1%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSYCLL-GHKLIDGYIKCGSVAEARKLFDEMPERHI 66
+T + ++L RAVH +I +G S C+ + L++ Y KCG +A+A +F+ + + +
Sbjct: 21 LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDV 80
Query: 67 VTWNSMISAHVSHG---KSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
V+WNS+I+ + +G S ++L+ M + +LP+AYT + IFKA S L GR+A
Sbjct: 81 VSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA 140
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H L V + D++V ++LV MY K + D VF + E++ ++ +++GYA G
Sbjct: 141 HALVVKMS-SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGR 199
Query: 184 DGEALEVFREMVDRRVK--PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
EA++VF + + + ++Y + L+S G+ IH +K+GL FVA
Sbjct: 200 VEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALS 259
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
+L+TMYS+C + ++ K+F+ + +TW++ V G QNG AV +F M +
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
P+ +T+ +L ACS E G+Q+H+ KLG E + A AL+++Y K G + AR
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
FD L E D+ S+I Y QN EAL L++R+K G+ PN T S+L AC++ +
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
E G Q+ H L + + + + E+ ++ N DVV W +++
Sbjct: 440 ELGKQVHGHTI-KHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 482 CRIHGEIEMAEKIMRKVLQ--LAPGD 505
+G+ + A ++ ++L + P D
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDD 524
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 137/308 (44%), Gaps = 8/308 (2%)
Query: 198 RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDS 257
+ P+ TL L + V G+ +HG I+++G + + L+ Y++C + +
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 258 VKVFNQLAYASHVTWTSFVVGLVQNG---REEVAVSVFREMIRCSVSPNPFTLSSILQAC 314
+FN + V+W S + G QNG + +FREM + PN +TL+ I +A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 315 SSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVN 374
SS VG Q HA+ K+ G+ +L+ +Y K G V+ VF + E + + +
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 375 SMIYAYAQNGFGYEALQ---LFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM 431
+M+ YA G EA++ LF R K+ G + + F ++L + V G Q+
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 432 KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMA 491
N + ++ + + + EA + + + + + W ++ +GE A
Sbjct: 248 IKNGLLGFVALS-NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 492 EKIMRKVL 499
K+ ++
Sbjct: 307 VKLFSRMF 314
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPE 63
+S++ C+ +L + VH H I GF + +G L Y KCGS+ + +F P
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPN 486
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ +V+WN+MIS +G+ +A+EL+ ML EG+ PD TF I A S G V G
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
++P+ TL L S + G +H + G L+N Y KCG + KA
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNG---FGYEALQLFKRIKKLGLAPNGVTFISILLACN 416
S+F+ + D+VS NS+I Y+QNG Y +QLF+ ++ + PN T I A
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA-- 127
Query: 417 NAGLVEEGCQLFAFMKNNHNIELTREHF------TCMIDLLGRSKRFEEAAMLINEVTNP 470
E Q + H + + F T ++ + ++ E+ + +
Sbjct: 128 -----ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 471 DVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
+ W T+++ G +E A K+ L+
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 313/556 (56%), Gaps = 8/556 (1%)
Query: 23 VHAHVISSG--FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHG 80
+HA VIS+G + + LI + G ++ ARK+FDE+P+R + +NSMI +
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 81 KSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVA 140
+ + LY M+ E + PD+ TF+ KA ++ G AV G + DVFV
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN-DVFVC 154
Query: 141 SALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVK 200
S+++++Y K KM +A ++F ++ ++DV+ +T ++ G+AQ+G +A+E +REM +
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 201 PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKV 260
+ + L + G+LGD+ G+ +HG++ ++GL V +TSL+ MY++ +E + +V
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 261 FNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMR 320
F+++ + + V+W S + G QNG A EM P+ TL +L ACS
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 321 EVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAY 380
+ G +H K + ++ AL+++Y KCG + +R +F+ + DLV N+MI Y
Sbjct: 335 KTGRLVHCYILKRHVL-DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCY 393
Query: 381 AQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELT 440
+G G E + LF ++ + + P+ TF S+L A +++GLVE+G F+ M N + I+ +
Sbjct: 394 GIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPS 453
Query: 441 REHFTCMIDLLGRSKRFEEAAMLIN-EVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVL 499
+H+ C+IDLL R+ R EEA +IN E + + +W LL+ C H + + + K+L
Sbjct: 454 EKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKIL 513
Query: 500 QLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGD 559
QL P G L++N +A+A KW +V +++ +R+ ++K P S ++V+ E+ TF+ D
Sbjct: 514 QLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMED 573
Query: 560 MSHPRAHEIFDMLHEL 575
+SH HE + ML L
Sbjct: 574 LSH---HEHYHMLQVL 586
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 92/174 (52%), Gaps = 5/174 (2%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
++ C+ SL T R VH +++ + L+D Y KCG+++ +R++F+ + + +
Sbjct: 324 VLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDL 383
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
V WN+MIS + HG ++ V L+ M + PD TF+++ A S GLV G+ H
Sbjct: 384 VCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQ--HWF 441
Query: 127 AVVLGLEVLDVFVAS--ALVDMYAKFDKMRDA-HLVFDRVLEKDVVLFTALIAG 177
+V++ + L+D+ A+ ++ +A ++ L+ + ++ AL++G
Sbjct: 442 SVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 192/628 (30%), Positives = 333/628 (53%), Gaps = 39/628 (6%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKC----GSVAEARKL 57
N YS I+ K+ + +H+ I+ G + K + + C G V+ A KL
Sbjct: 32 NDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFW-CSRLGGHVSYAYKL 90
Query: 58 FDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFS-ELGL 116
F ++PE +V WN+MI + V LY NML EGV PD++TF + + G
Sbjct: 91 FVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGA 150
Query: 117 VRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIA 176
+ G++ H V GL +++V +ALV MY+ M A VFDR ++DV + +I+
Sbjct: 151 LACGKKLHCHVVKFGLGS-NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 177 GYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES 236
GY + E++E+ EM V P TL L++C + D + +H ++ + E
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVA-------- 288
+ + +L+ Y+ C ++ +V++F + ++WTS V G V+ G ++A
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 289 -----------------------VSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQ 325
+ +FREM + P+ FT+ S+L AC+ E+GE
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGF 385
I K ++ + G ALI++Y KCG +KA+ VF + + D + +M+ A NG
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT 445
G EA+++F +++ + + P+ +T++ +L ACN++G+V++ + FA M+++H IE + H+
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 446 CMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG 504
CM+D+LGR+ +EA ++ ++ NP+ ++W LL A R+H + MAE +K+L+L P
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 505 DGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPR 564
+G + LL N+YA +W + E++ I D+ +KK+P S ++V+ H F+AGD SH +
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQ 629
Query: 565 AHEIFDMLHELIEKAKTLGYSPDTRFVL 592
+ EI+ L EL +++ Y PDT +L
Sbjct: 630 SEEIYMKLEELAQESTFAAYLPDTSELL 657
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/550 (33%), Positives = 315/550 (57%), Gaps = 10/550 (1%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCG-SVAEARKLFDE 60
Y+SL+ C S HAHV+ SG +G+ L+ Y K G + E R++FD
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ ++W SM+S +V+ + +A+E++ M+ G+ + +T S+ KA SELG VR G
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
R HG+ + G E + F++S L +Y + DA VFD + E DV+ +TA+++ +++
Sbjct: 183 RCFHGVVITHGFE-WNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 181 SGLDGEALEVFREM-VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
+ L EAL +F M + + P+ T + L +CGNL G+ IHG ++ +G+ S V
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
++SLL MY +C V ++ +VFN ++ + V+W++ + G QNG E A+ +FREM
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM---- 357
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
+ + ++L+AC+ A +G++IH + G GN +ALI+LYGK G +D A
Sbjct: 358 EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
V+ ++ ++++ N+M+ A AQNG G EA+ F + K G+ P+ ++FI+IL AC + G
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTL 478
+V+EG F M ++ I+ EH++CMIDLLGR+ FEEA L+ D LW L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 479 LNACRIHGEI-EMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKL 537
L C + + +AE+I +++++L P +++LL+N+Y + G+ + ++ + +
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Query: 538 KKSPARSWVD 547
K+ +SW+D
Sbjct: 598 AKTVGQSWID 607
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 7/317 (2%)
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
EA+ + + AS L +C + ++G H +VKSGLE+ SLL
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 246 TMYSRCSM-VEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEV-AVSVFREMIRCSVSPN 303
++Y + + ++ +VF+ ++WTS + G V G+E V A+ VF EM+ + N
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV-TGKEHVKALEVFVEMVSFGLDAN 162
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
FTLSS ++ACS +G H + G E N + L LYG AR VFD
Sbjct: 163 EFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD 222
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK-LGLAPNGVTFISILLACNNAGLVE 422
+ E D++ +++ A+++N EAL LF + + GL P+G TF ++L AC N ++
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 423 EGCQLFA-FMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
+G ++ + N + E + ++D+ G+ EA + N ++ + V W LL
Sbjct: 283 QGKEIHGKLITNGIGSNVVVE--SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGG 340
Query: 482 CRIHGEIEMAEKIMRKV 498
+GE E A +I R++
Sbjct: 341 YCQNGEHEKAIEIFREM 357
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 2/216 (0%)
Query: 267 ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI 326
+S T S ++ L + G+ A+ + + P +S+LQ C+ G Q
Sbjct: 24 SSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQF 83
Query: 327 HAITTKLGMEGNKDAGAALINLYGKCG-NVDKARSVFDVLTELDLVSVNSMIYAYAQNGF 385
HA K G+E +++ G +L++LY K G + + R VFD D +S SM+ Y
Sbjct: 84 HAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKE 143
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT 445
+AL++F + GL N T S + AC+ G V G + F + H E +
Sbjct: 144 HVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG-RCFHGVVITHGFEWNHFISS 202
Query: 446 CMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
+ L G ++ +A + +E+ PDV+ W +L+A
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSA 238
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 288/525 (54%), Gaps = 5/525 (0%)
Query: 156 AHLVFDRV-LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRV-KPNEYTLASTLASC 213
A L+FD + + LI G++ S ++ + M+ V +P+ +T L SC
Sbjct: 58 AQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSC 117
Query: 214 GNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWT 273
+ IHG +++SG TSL+ YS VE + KVF+++ V+W
Sbjct: 118 ERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWN 177
Query: 274 SFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKL 333
+ G A+S+++ M V + +TL ++L +C+ + +G +H I +
Sbjct: 178 VMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDI 237
Query: 334 GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLF 393
E ALI++Y KCG+++ A VF+ + + D+++ NSMI Y +G G EA+ F
Sbjct: 238 RCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFF 297
Query: 394 KRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
+++ G+ PN +TF+ +LL C++ GLV+EG + F M + ++ +H+ CM+DL GR
Sbjct: 298 RKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGR 357
Query: 454 SKRFEEA-AMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILL 512
+ + E + M+ + D VLWRTLL +C+IH +E+ E M+K++QL + G ++L+
Sbjct: 358 AGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLM 417
Query: 513 TNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
T++Y++A M+ IR L+ P SW+++ +VH F+ D HP + I+ L
Sbjct: 418 TSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSEL 477
Query: 573 HELIEKAKTLGYSP-DTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFK 631
E+I +A GY P D+ L + S+ HSEKLAIA+ L +T TT +RI K
Sbjct: 478 GEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTT-LRITK 536
Query: 632 NLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
NLRVC DCHS+ K+V+ R+II RD RFHHF G+CSC DYW
Sbjct: 537 NLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 171/350 (48%), Gaps = 7/350 (2%)
Query: 15 KSLTTLRAVHAHVISSGFSY--CLLGHKLIDGYIKC-GSVAEARKLFDEM-PERHIVTWN 70
S+ LR +H+HVI +G + + H L + GS++ A+ LFD + WN
Sbjct: 16 NSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWN 75
Query: 71 SMISAHVSHGKSKQAVELYGNMLVEGV-LPDAYTFSAIFKAFSELGLVRYGRRAHGLAVV 129
+I + ++ Y ML+ V PD +TF+ K+ + + HG +
Sbjct: 76 YLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIR 135
Query: 130 LGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALE 189
G + D VA++LV Y+ + A VFD + +D+V + +I ++ GL +AL
Sbjct: 136 SGF-LDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALS 194
Query: 190 VFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYS 249
+++ M + V + YTL + L+SC ++ G ++H ES V +L+ MY+
Sbjct: 195 MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 250 RCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSS 309
+C +E+++ VFN + +TW S ++G +G A+S FR+M+ V PN T
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 314
Query: 310 ILQACSSRAMREVG-EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+L CS + + + G E ++++ + N +++LYG+ G ++ +
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 26/283 (9%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
+ C KS+ +H VI SGF ++ L+ Y GSV A K+FDEMP R +
Sbjct: 114 LKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDL 173
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
V+WN MI G QA+ +Y M EGV D+YT A+ + + + + G H +
Sbjct: 174 VSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRI 233
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGE 186
A + E VFV++AL+DMYAK + +A VF+ + ++DV+ + ++I GY G E
Sbjct: 234 ACDIRCESC-VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVE 292
Query: 187 ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF--VASQTSL 244
A+ FR+MV V+PN T L C + G +VK G+E F ++SQ L
Sbjct: 293 AISFFRKMVASGVRPNAITFLGLLLGCSHQG-----------LVKEGVEHFEIMSSQFHL 341
Query: 245 ----------LTMYSRCSMVEDSVK-VFNQLAYASHVTWTSFV 276
+ +Y R +E+S++ ++ + V W + +
Sbjct: 342 TPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/583 (31%), Positives = 311/583 (53%), Gaps = 13/583 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y+ + C L +H V+ +G S L + LID Y KCG + +A LFD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKA----FSELGLVR 118
ER V+WNS+IS +V G +++ + L M +G+ Y ++ KA +E G +
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE-GFIE 269
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G H LG+E D+ V +AL+DMYAK +++A +F + K+VV + A+I+G+
Sbjct: 270 KGMAIHCYTAKLGME-FDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Query: 179 AQ-----SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
Q EA ++F +M R ++P+ T + L +C G+ IH I K+
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFR 293
+S ++L+ +Y+ ED ++ F + +WTS + VQN + E A +FR
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 294 EMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
++ + P +T+S ++ AC+ A GEQI K G++ + I++Y K G
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 354 NVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
N+ A VF + D+ + ++MI + AQ+G EAL +F+ +K G+ PN F+ +L+
Sbjct: 509 NMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLI 568
Query: 414 ACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPD-V 472
AC + GLV +G + F MKN++ I +HFTC++DLLGR+ R +A LI D
Sbjct: 569 ACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP 628
Query: 473 VLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTI 532
V WR LL++CR++ + + +++ ++++L P G+++LL N+Y +G + E++ +
Sbjct: 629 VTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELM 688
Query: 533 RDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHEL 575
RD +KK PA SW+ + + H+F D+SHP + I+ ML +
Sbjct: 689 RDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 248/504 (49%), Gaps = 11/504 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVI-SSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y L A + S+ + H H+I SS L + L++ Y KC + AR+LFD MP
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER+I+++NS+IS + G +QA+EL+ + D +T++ E + G
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
HGL VV GL VF+ + L+DMY+K K+ A +FDR E+D V + +LI+GY + G
Sbjct: 170 LHGLVVVNGLSQ-QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVG 228
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTL-ASCGNLGDSV--NGQLIHGFIVKSGLESFVA 239
E L + +M + Y L S L A C NL + G IH + K G+E +
Sbjct: 229 AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIV 288
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQ-----NGREEVAVSVFRE 294
+T+LL MY++ +++++K+F+ + + VT+ + + G +Q + A +F +
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD 348
Query: 295 MIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGN 354
M R + P+P T S +L+ACS+ E G QIHA+ K + ++ G+ALI LY G+
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 355 VDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
+ F ++ D+ S SMI + QN A LF+++ + P T ++ A
Sbjct: 409 TEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSA 468
Query: 415 CNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVL 474
C + + G Q+ + + I+ T I + +S A + EV NPDV
Sbjct: 469 CADFAALSSGEQIQGYAIKS-GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVAT 527
Query: 475 WRTLLNACRIHGEIEMAEKIMRKV 498
+ ++++ HG A I +
Sbjct: 528 YSAMISSLAQHGSANEALNIFESM 551
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 215/409 (52%), Gaps = 12/409 (2%)
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
D+ + +F+ ++ G V G+ AHG ++ +++ + L++MY K ++ A +
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHG-HMIKSSLNPCLYLLNNLLNMYCKCRELGFARQL 104
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
FDR+ E++++ F +LI+GY Q G +A+E+F E + +K +++T A L CG D
Sbjct: 105 FDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDL 164
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
G+L+HG +V +GL V L+ MYS+C ++ ++ +F++ V+W S + G
Sbjct: 165 DLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGY 224
Query: 280 VQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS---SRAMREVGEQIHAITTKLGME 336
V+ G E +++ +M R ++ + L S+L+AC + E G IH T KLGME
Sbjct: 225 VRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGME 284
Query: 337 GNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQ-----NGFGYEALQ 391
+ AL+++Y K G++ +A +F ++ ++V+ N+MI + Q + EA +
Sbjct: 285 FDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFK 344
Query: 392 LFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLL 451
LF +++ GL P+ TF +L AC+ A +E G Q+ A + N N + + +I+L
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN-NFQSDEFIGSALIELY 403
Query: 452 GRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGE-IEMAEKIMRKVL 499
E+ + D+ W ++++ C + E +E A + R++
Sbjct: 404 ALMGSTEDGMQCFASTSKQDIASWTSMID-CHVQNEQLESAFDLFRQLF 451
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/565 (32%), Positives = 315/565 (55%), Gaps = 7/565 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDG-YIKCGSVAEARKLFDEMP 62
++SL+ CA + + ++++ +I G+S ++ + G Y CG + AR++FD +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
R V WN+MI + + K + + + NML+ GV P +T+S + S+LG G+
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H +++ + D+ + +AL+DMY MR+A VF R+ ++V + ++I+G +++G
Sbjct: 322 IHA-RIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENG 380
Query: 183 LDGEALEVFREMVDRRV-KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
+A+ ++R ++ +P+EYT ++ +++ V+G+L+HG + K G E V
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
T+LL+MY + E + KVF+ + V WT +VG + G E+AV F EM R
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
+ F+LSS++ ACS AM GE H + + G + AL+++YGK G + A ++
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETI 560
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F + + DL NSM+ AY+Q+G +AL F++I + G P+ VT++S+L AC++ G
Sbjct: 561 FSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGST 620
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT--NPDVVLWRTLL 479
+G L+ MK I+ +H++CM++L+ ++ +EA LI + N LWRTLL
Sbjct: 621 LQGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLL 679
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
+AC +++ ++L+L P D THILL+NLYA G+W V EM+ IR L K
Sbjct: 680 SACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSK 739
Query: 540 SPARSWVDV-DREVHTFMAGDMSHP 563
P SW++V + F +GD S+P
Sbjct: 740 DPGLSWIEVNNNNTQVFSSGDQSNP 764
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 229/471 (48%), Gaps = 17/471 (3%)
Query: 34 YCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWN--SMISAHVSHGKS--KQAVELY 89
Y + LI Y++C S+ +ARK+FD+MP+R+IVT S + +VS G S Q ++L
Sbjct: 21 YPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKL- 79
Query: 90 GNMLVEGVLPDAYTFSAIFKAFSE---LGLVRYGRRAHGLAVVLGLEVL--DVFVASALV 144
G+ + +P S++ + + + +++ R+ H L + G + + L+
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 145 DMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS-GLDGEALEVFREMVDRRVKPNE 203
MY + + A VFD++ ++VV + AL + Y+++ A + M VKPN
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 204 YTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQ 263
T S + C L D + G ++ I+K G V QTS+L MYS C +E + ++F+
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 264 LAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG 323
+ V W + +VG ++N + E + FR M+ V P FT S +L CS +G
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQN 383
+ IHA + AL+++Y CG++ +A VF + +LVS NS+I ++N
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 384 GFGYEALQLFKRIKKLGLA-PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTRE 442
GFG +A+ +++R+ ++ P+ TF + + A G L + + R
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVT---KLGYERS 436
Query: 443 HF--TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMA 491
F T ++ + +++ E A + + + DVVLW ++ G E+A
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELA 487
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 132/289 (45%), Gaps = 25/289 (8%)
Query: 228 FIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW--TSFVVGLVQNG-- 283
F+ + + +L++MY RCS +E + KVF+++ + VT S V V G
Sbjct: 12 FVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSS 71
Query: 284 --REEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDA 341
+ + + F+ + ++ ++ + + C S + + QIHA+ G ++
Sbjct: 72 LHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATES 131
Query: 342 GAA---LINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQN-GFGYEALQLFKRIK 397
A LI++Y +CG++++AR VFD + ++VS N++ AY++N F A L +
Sbjct: 132 PYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMA 191
Query: 398 KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF-------TCMIDL 450
+ PN TF S++ C ++E+ M ++ N ++ + + T ++ +
Sbjct: 192 FEYVKPNSSTFTSLVQVC---AVLED-----VLMGSSLNSQIIKLGYSDNVVVQTSVLGM 243
Query: 451 LGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVL 499
E A + + V N D V W T++ + +IE R +L
Sbjct: 244 YSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 172/563 (30%), Positives = 313/563 (55%), Gaps = 6/563 (1%)
Query: 36 LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE 95
+L LI Y + G V EAR LFDEMP+R +V W +MI+ + S + +A E + M+ +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFD-KMR 154
G P+ +T S++ K+ + ++ YG HG+ V LG+E ++V +A+++MYA M
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEG-SLYVDNAMMNMYATCSVTME 164
Query: 155 DAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCG 214
A L+F + K+ V +T LI G+ G L+++++M+ + Y + + +
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 215 NLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTS 274
++ G+ IH ++K G +S + S+L +Y RC + ++ F+++ +TW +
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 275 FVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG 334
+ L ++ E A+ +F+ PN +T +S++ AC++ A G+Q+H + G
Sbjct: 285 LISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVF-DVLTELDLVSVNSMIYAYAQNGFGYEALQLF 393
N + ALI++Y KCGN+ ++ VF +++ +LVS SM+ Y +G+G EA++LF
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 394 KRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
++ G+ P+ + F+++L AC +AGLVE+G + F M++ + I R+ + C++DLLGR
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 454 SKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKI-MRKVLQLAPGDGGTHIL 511
+ + EA L+ + PD W +L AC+ H + ++ RKV++L P GT+++
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 512 LTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDM 571
L+ +YA+ GKW ++ +R + KK SW+ V+ +V +F D P A ++ +
Sbjct: 524 LSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSV 583
Query: 572 LHELIEKAKTLGYSPDTRFVLQD 594
L LIE+ + GY P+ ++ D
Sbjct: 584 LGLLIEETREAGYVPELDSLVND 606
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 129/228 (56%), Gaps = 15/228 (6%)
Query: 12 AHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWN 70
A S+TT + +HA VI GF L + + ++D Y +CG ++EA+ F EM ++ ++TWN
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 71 SMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVL 130
++IS + S +A+ ++ +G +P+ YTF+++ A + + + G++ HG
Sbjct: 284 TLIS-ELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 131 GLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE-KDVVLFTALIAGYAQSGLDGEALE 189
G +V +A+AL+DMYAK + D+ VF +++ +++V +T+++ GY G EA+E
Sbjct: 343 GFNK-NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 190 VFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF 237
+F +MV ++P+ + L++C H +V+ GL+ F
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACR-----------HAGLVEKGLKYF 438
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
++SL+ CA+ +L + +H + GF+ + L + LID Y KCG++ +++++F E+
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 63 E-RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
+ R++V+W SM+ + SHG +AVEL+ M+ G+ PD F A+ A GLV G
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ F+ M + + D ++ ++ ++
Sbjct: 436 K--------------------------YFNVMESEYGI-----NPDRDIYNCVVDLLGRA 464
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASC 213
G GEA E+ M KP+E T + L +C
Sbjct: 465 GKIGEAYELVERM---PFKPDESTWGAILGAC 493
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 302/546 (55%), Gaps = 9/546 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVIS-SGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+S + C + L + +H ++ F +L L+D Y KCG + A K+F+++
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT-GLLDMYAKCGEIKSAHKVFNDIT 203
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
R++V W SMI+ +V + ++ + L+ M VL + YT+ + A ++L + G+
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKW 263
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
HG V G+E+ V S L+DMY K + +A VF+ D+V++TA+I GY +G
Sbjct: 264 FHGCLVKSGIELSSCLVTS-LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 322
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL-ESFVASQ 241
EAL +F++M +KPN T+AS L+ CG + + G+ +HG +K G+ ++ VA+
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVAN- 381
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
+L+ MY++C D+ VF + V W S + G QNG A+ +F M SV+
Sbjct: 382 -ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVT 440
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDA--GAALINLYGKCGNVDKAR 359
PN T++S+ AC+S VG +HA + KLG + G AL++ Y KCG+ AR
Sbjct: 441 PNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSAR 500
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
+FD + E + ++ ++MI Y + G +L+LF+ + K PN TF SIL AC + G
Sbjct: 501 LIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTG 560
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTL 478
+V EG + F+ M ++N + +H+TCM+D+L R+ E+A +I ++ PDV +
Sbjct: 561 MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAF 620
Query: 479 LNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLK 538
L+ C +H ++ E +++K+L L P D ++L++NLYAS G+WNQ E++ ++ L
Sbjct: 621 LHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLS 680
Query: 539 KSPARS 544
K S
Sbjct: 681 KIAGHS 686
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 276/529 (52%), Gaps = 18/529 (3%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERH 65
L+++C + SL R H + +G + + KL+ Y G +AR +FD++PE
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
W M+ + + +S + V+LY ++ G D FS KA +EL + G++ H
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH- 165
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG 185
++ + D V + L+DMYAK +++ AH VF+ + ++VV +T++IAGY ++ L
Sbjct: 166 -CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
E L +F M + V NEYT + + +C L G+ HG +VKSG+E TSLL
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
MY +C + ++ +VFN+ ++ V WT+ +VG NG A+S+F++M + PN
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
T++S+L C E+G +H ++ K+G+ + + AL+++Y KC A+ VF++
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 366 TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGC 425
+E D+V+ NS+I ++QNG +EAL LF R+ + PNGVT S+ AC + G + G
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGS 463
Query: 426 QLFAFMKNNHNIELTREHF-TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRI 484
L A+ + + H T ++D + + A ++ + + + + W ++
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGK 523
Query: 485 HGE----IEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMK 529
G+ +E+ E++++K Q P + T++ ++ G V E K
Sbjct: 524 QGDTIGSLELFEEMLKK--QQKPNES----TFTSILSACGHTGMVNEGK 566
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 313/577 (54%), Gaps = 11/577 (1%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGF--SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
+ +CA K + + +H ++ GF G L++ Y KCG + A +F ER
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERD 125
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
+ +N++IS V +G A+E Y M G+LPD YTF ++ K + L ++ HG
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHG 184
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKD-VVLFTALIAGYAQSGLD 184
LA LG + D +V S LV Y+KF + DA VFD + ++D VL+ AL+ GY+Q
Sbjct: 185 LAFKLGFDS-DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSL 244
+AL VF +M + V + +T+ S L++ GD NG+ IHG VK+G S + +L
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 245 LTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNP 304
+ MY + +E++ +F + TW S + G + +++F M+ + P+
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 305 FTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGA----ALINLYGKCGNVDKARS 360
TL+++L C A G +IH G+ K + +L+++Y KCG++ AR
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
VFD + D S N MI Y G AL +F + + G+ P+ +TF+ +L AC+++G
Sbjct: 424 VFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAML-INEVTNPDVVLWRTLL 479
+ EG A M+ +NI T +H+ C+ID+LGR+ + EEA L I++ + V+WR++L
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
++CR+HG ++A +++ +L P G ++L++N+Y AGK+ +V++++ +R +KK
Sbjct: 544 SSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKK 603
Query: 540 SPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELI 576
+P SW+ + VHTF G+ +HP I D L +I
Sbjct: 604 TPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVI 640
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 169/341 (49%), Gaps = 11/341 (3%)
Query: 162 RVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN 221
R L ++ LF A+ A + L E R N T +TL C D V+
Sbjct: 19 RFLPRNPDLFAAIKPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVS 78
Query: 222 GQLIHGFIVKSG-LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLV 280
GQ IHGF+V+ G L+ + TSL+ MY++C ++ +V VF + + + + G V
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFV 137
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
NG A+ +REM + P+ +T S+L+ + + +V +++H + KLG + +
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCY 196
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTEL-DLVSVNSMIYAYAQNGFGYEALQLFKRIKKL 399
G+ L+ Y K +V+ A+ VFD L + D V N+++ Y+Q +AL +F ++++
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 400 GLAPNGVTFISILLACNNAGLVEEGCQLFAF-MKNNHNIELTREHFTCMIDLLGRSKRFE 458
G+ + T S+L A +G ++ G + +K ++ + +ID+ G+SK E
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN--ALIDMYGKSKWLE 314
Query: 459 EAAMLINEVTNPDVVLWRTLL---NACRIH-GEIEMAEKIM 495
EA + + D+ W ++L + C H G + + E+++
Sbjct: 315 EANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 310/558 (55%), Gaps = 15/558 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLG-HKLIDGYIKCG---SVAEARKLFD 59
Y +++Q + +SL L +H +I S ++ +LID C +++ AR +F+
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
+ + WNSMI + + +A+ Y ML +G PD +TF + KA S L +++
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G HG V G EV +++V++ L+ MY ++ VF+ + + +VV + +LI+G+
Sbjct: 126 GSCVHGFVVKTGFEV-NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFV 184
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
+ +A+E FREM VK NE + L +CG D V G+ HGF+ G + +
Sbjct: 185 NNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQ 244
Query: 240 SQ--------TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSV 291
S+ TSL+ MY++C + + +F+ + + V+W S + G QNG E A+ +
Sbjct: 245 SKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCM 304
Query: 292 FREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGK 351
F +M+ ++P+ T S+++A + ++G+ IHA +K G + AL+N+Y K
Sbjct: 305 FLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAK 364
Query: 352 CGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA-PNGVTFIS 410
G+ + A+ F+ L + D ++ +I A +G G EAL +F+R+++ G A P+G+T++
Sbjct: 365 TGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLG 424
Query: 411 ILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TN 469
+L AC++ GLVEEG + FA M++ H +E T EH+ CM+D+L R+ RFEEA L+ +
Sbjct: 425 VLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK 484
Query: 470 PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMK 529
P+V +W LLN C IH +E+ ++I V + G ++LL+N+YA AG+W V ++
Sbjct: 485 PNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIR 544
Query: 530 TTIRDLKLKKSPARSWVD 547
+++ ++ K S V+
Sbjct: 545 ESMKSKRVDKVLGHSSVE 562
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/614 (31%), Positives = 314/614 (51%), Gaps = 42/614 (6%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
+SL++ C ++ VHAH ISSG Y +L KL+ Y EA+ + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
H + WN +I+++ + ++ + Y M+ +G+ PDA+T+ ++ KA E V +GR
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
HG V + ++V +AL+ MY +F M A +FDR+ E+D V + A+I YA G+
Sbjct: 167 HGSIEVSSYKS-SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN---------------------- 221
EA E+F +M V+ + T C G+ V
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 222 -------------GQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYAS 268
G+ IHG + S + + +L+TMYS+C + ++ VF Q S
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 269 HVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA 328
TW S + G Q + E A + REM+ PN TL+SIL C+ A + G++ H
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 329 -ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGY 387
I + + +L+++Y K G + A+ V D++++ D V+ S+I Y G G
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Query: 388 EALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCM 447
AL LFK + + G+ P+ VT +++L AC+++ LV EG +LF M+ + I +HF+CM
Sbjct: 466 VALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525
Query: 448 IDLLGRSKRFEEAAMLI-NEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDG 506
+DL GR+ +A +I N P W TLLNAC IHG ++ + K+L++ P +
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENP 585
Query: 507 GTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRA- 565
G ++L+ N+YA+AG W+++ E++T +RDL +KK P +W+D D F GD S P A
Sbjct: 586 GYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEAC 645
Query: 566 --HEIFDMLHELIE 577
+ + D L++L++
Sbjct: 646 NTYPLLDGLNQLMK 659
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%)
Query: 204 YTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQ 263
++ AS L++C ++ + G +H + SG+E L+T YS ++ ++ +
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN 103
Query: 264 LAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG 323
+ W + +N E ++ ++ M+ + P+ FT S+L+AC G
Sbjct: 104 SDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQN 383
+H + + ALI++Y + N+ AR +FD + E D VS N++I YA
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223
Query: 384 GFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKN 433
G EA +LF ++ G+ + +T+ I C G L + M+N
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRN 273
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 312/602 (51%), Gaps = 77/602 (12%)
Query: 47 KCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSA 106
K G +A AR++FD MPE V WN+M++++ G ++A+ L+ + PD Y+F+A
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 107 IFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV--- 163
I + LG V++GR+ L + G + V ++L+DMY K A+ VF +
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGF-CASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 164 -----------------------------LEKDVVL-FTALIAGYAQSGLDGEALEVFRE 193
+ K V + +I+G+A G L +F+E
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 194 MVDRRVKPNEYTLASTLASC-GNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCS 252
M++ KP+ YT +S + +C + + V G+++H ++K+G S V ++ S+L+ Y++
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 253 MVED------SVKVFNQLAYAS------------------H-------VTWTSFVVGLVQ 281
+D S++V Q+++ S H VTWT+ + G +
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 282 NGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDA 341
NG E A+ F EM++ V + F ++L ACS A+ G+ IH G +G
Sbjct: 315 NGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYV 374
Query: 342 GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGL 401
G AL+NLY KCG++ +A F + DLVS N+M++A+ +G +AL+L+ + G+
Sbjct: 375 GNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGI 434
Query: 402 APNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA- 460
P+ VTFI +L C+++GLVEEGC +F M ++ I L +H TCMID+ GR EA
Sbjct: 435 KPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAK 494
Query: 461 ------AMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA-PGDGGTHILLT 513
+ L+ + +N W TLL AC H E+ ++ KVL++A P + + +LL+
Sbjct: 495 DLATTYSSLVTDSSNNSS--WETLLGACSTHWHTELGREV-SKVLKIAEPSEEMSFVLLS 551
Query: 514 NLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLH 573
NLY S G+W + +++ + + +KK+P SW++V +V TF+ GD SHPR E+ + L+
Sbjct: 552 NLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLN 611
Query: 574 EL 575
L
Sbjct: 612 CL 613
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 193/453 (42%), Gaps = 75/453 (16%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFD--- 59
++++++ CA ++ R + + VI SGF L + + LID Y KC A K+F
Sbjct: 73 FTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC 132
Query: 60 ------------------------------EMPERHIVTWNSMISAHVSHGKSKQAVELY 89
EMP+R WN MIS H GK + + L+
Sbjct: 133 CDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLF 192
Query: 90 GNMLVEGVLPDAYTFSAIFKAFS-ELGLVRYGRRAHGLAVVLG----------------- 131
ML PD YTFS++ A S + V YGR H + + G
Sbjct: 193 KEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTK 252
Query: 132 -------------LEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
+EVL ++++D K + A VF EK++V +T +I GY
Sbjct: 253 LGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGY 312
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
++G +AL F EM+ V + + + L +C L +G++IHG ++ G + +
Sbjct: 313 GRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA 372
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
+L+ +Y++C ++++ + F +A V+W + + +G + A+ ++ MI
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLGMEGNKDAGAALINLYGKCGNVDK 357
+ P+ T +L CS + E G I ++ + D +I+++G+ G++ +
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 358 ARSVFDVLTELDLVSVNSMIYAYAQNGFGYEAL 390
A+ DL + S + + N +E L
Sbjct: 493 AK---------DLATTYSSLVTDSSNNSSWETL 516
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 188/428 (43%), Gaps = 88/428 (20%)
Query: 148 AKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLA 207
AK ++ A VFD + E D V + ++ Y++ GL EA+ +F ++ KP++Y+
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 208 STLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA 267
+ L++C +LG+ G+ I +++SG + + SL+ MY +CS + KVF +
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 268 S--HVTWTSF-------------------------------VVGLVQNGREEVAVSVFRE 294
S VTW S + G G+ E +S+F+E
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 295 MIRCSVSPNPFTLSSILQACSSRAMREV-GEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
M+ P+ +T SS++ ACS+ + V G +HA+ K G +A ++++ Y K G
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 354 NVD-------------------------------KARSVFDVLTELDLVSVNSMIYAYAQ 382
+ D KA VF + E ++V+ +MI Y +
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 383 NGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE-----EGC------QLFAFM 431
NG G +AL+ F + K G+ + + ++L AC+ L+ GC Q +A++
Sbjct: 315 NGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYV 374
Query: 432 KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMA 491
N +++L + +EA ++ N D+V W T+L A +HG + A
Sbjct: 375 GN------------ALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQA 422
Query: 492 EKIMRKVL 499
K+ ++
Sbjct: 423 LKLYDNMI 430
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 119/299 (39%), Gaps = 45/299 (15%)
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
TS + ++ + + +VF+ + V W + + + G + A+++F ++
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
P+ ++ ++IL C+S + G +I ++ + G + +LI++YGKC + A V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 362 F------------------------------DVLTELD---LVSVNSMIYAYAQNGFGYE 388
F DV E+ + N MI +A G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 389 ALQLFKRIKKLGLAPNGVTFISILLACN-NAGLVEEGCQLFAFMKNN---HNIELTREHF 444
L LFK + + P+ TF S++ AC+ ++ V G + A M N +E
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 445 TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAP 503
+ L R E + + V W ++++AC GE E A +V LAP
Sbjct: 248 SFYTKLGSRDDAMRE----LESIEVLTQVSWNSIIDACMKIGETEKA----LEVFHLAP 298
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 303/541 (56%), Gaps = 9/541 (1%)
Query: 42 IDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNML-VEGVLPD 100
I Y + G + +R++FD ER+I WN+MI +V + +++EL+ + + ++ D
Sbjct: 258 ISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSD 317
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
T+ A S L V GR+ HG V L + + ++L+ MY++ + + VF
Sbjct: 318 EVTYLLAASAVSALQQVELGRQFHGF-VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF 376
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
+ E+DVV + +I+ + Q+GLD E L + EM + K + T+ + L++ NL +
Sbjct: 377 LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 436
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYAS--HVTWTSFVVG 278
G+ H F+++ G++ F + L+ MYS+ ++ S K+F YA TW S + G
Sbjct: 437 IGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISG 495
Query: 279 LVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGN 338
QNG E VFR+M+ ++ PN T++SIL ACS ++G+Q+H + + ++ N
Sbjct: 496 YTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQN 555
Query: 339 KDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK 398
+AL+++Y K G + A +F E + V+ +MI Y Q+G G A+ LF +++
Sbjct: 556 VFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE 615
Query: 399 LGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFE 458
G+ P+ +TF+++L AC+ +GL++EG ++F M+ +NI+ + EH+ C+ D+LGR R
Sbjct: 616 SGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVN 675
Query: 459 EAAMLINEVTNPDVV--LWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDG--GTHILLTN 514
EA + + + LW +LL +C++HGE+E+AE + ++ + G G +LL+N
Sbjct: 676 EAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSN 735
Query: 515 LYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHE 574
+YA KW V +++ +R+ LKK RS +++ V+ F++ D HP + EI+D++
Sbjct: 736 MYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDG 795
Query: 575 L 575
L
Sbjct: 796 L 796
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 275/572 (48%), Gaps = 50/572 (8%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAE------ARK 56
YSS + CA TK+L +AVH H+I + + H L++ Y+ C + + RK
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 57 LFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGL 116
+FD M +++V WN++IS +V G++ +A +G M+ V P +F +F A S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 117 VRYGRRAHGLAVVLGLE-VLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALI 175
++ +GL + LG E V D+FV S+ + MYA+ + + VFD +E+++ ++ +I
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 176 AGYAQSGLDGEALEVFREMV-DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL 234
Y Q+ E++E+F E + + + +E T ++ L G+ HGF+ K+
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 235 ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFRE 294
E + SL+ MYSRC V S VF + V+W + + VQNG ++ + + E
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 295 MIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGN 354
M + + T++++L A S+ +E+G+Q HA + G++ + + LI++Y K G
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF-EGMNSYLIDMYSKSGL 468
Query: 355 VDKARSVFD--VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISIL 412
+ ++ +F+ E D + NSMI Y QNG + +F+++ + + PN VT SIL
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Query: 413 LACNNAGLVEEGCQLFAFMKN---NHNI-----------------------ELTREH--- 443
AC+ G V+ G QL F + N+ T+E
Sbjct: 529 PACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSV 588
Query: 444 -FTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRTLLNACRIHGEIEMAEKI---M 495
+T MI G+ E A L + PD + + +L+AC G I+ KI M
Sbjct: 589 TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Query: 496 RKVLQLAPGDGGTHILLTNLYASAGKWNQVIE 527
R+V + P + +T++ G+ N+ E
Sbjct: 649 REVYNIQP-SSEHYCCITDMLGRVGRVNEAYE 679
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 215/471 (45%), Gaps = 28/471 (5%)
Query: 49 GSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP--DAYTFSA 106
G+ AR+LFD +P+ V WN++I + + +A+ Y M DAYT+S+
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 107 IFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYA---------KFDKMRDAH 157
KA +E ++ G+ H ++ L+ V ++L++MY ++D +R
Sbjct: 113 TLKACAETKNLKAGKAVH-CHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK-- 169
Query: 158 LVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
VFD + K+VV + LI+ Y ++G + EA F M+ VKP+ + + +
Sbjct: 170 -VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 218 DSVNGQLIHGFIVKSGLES----FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWT 273
+ +G ++K G E FV S S ++MY+ +E S +VF+ + W
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVS--SAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 274 SFVVGLVQNGREEVAVSVFREMIRC-SVSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
+ + VQN ++ +F E I + + T A S+ E+G Q H +K
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Query: 333 LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQL 392
E +L+ +Y +CG+V K+ VF + E D+VS N+MI A+ QNG E L L
Sbjct: 347 NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLML 406
Query: 393 FKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM-KNNHNIELTREHFTCMIDLL 451
++K G + +T ++L A +N E G Q AF+ + E + +ID+
Sbjct: 407 VYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY---LIDMY 463
Query: 452 GRSK--RFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
+S R + + D W ++++ +G E + RK+L+
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 297/540 (55%), Gaps = 7/540 (1%)
Query: 15 KSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMI 73
KS+ VH ++ S F + + L+ Y+ G V AR +FD M R +++WN+MI
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 74 SAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLE 133
S + +G A+ ++ M+ E V D T ++ L + GR H L L
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 134 VLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFRE 193
+ V +ALV+MY K +M +A VFDR+ +DV+ +T +I GY + G ALE+ R
Sbjct: 251 D-KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 194 MVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSM 253
M V+PN T+AS ++ CG+ +G+ +HG+ V+ + S + +TSL++MY++C
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 254 VEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA 313
V+ +VF+ + W++ + G VQN A+ +F+ M R V PN TL+S+L A
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 314 CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE----LD 369
++ A IH TK G + DA L+++Y KCG ++ A +F+ + E D
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 370 LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFA 429
+V ++I Y +G G+ ALQ+F + + G+ PN +TF S L AC+++GLVEEG LF
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 430 FMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEI 488
FM ++ H+TC++DLLGR+ R +EA LI + P +W LL AC H +
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENV 609
Query: 489 EMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDV 548
++ E K+ +L P + G ++LL N+YA+ G+W + ++++ + ++ L+K P S +++
Sbjct: 610 QLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 254/503 (50%), Gaps = 8/503 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
Y SL+ A T+S++ +A+H HVI+ G + L Y CG + ARKLF+EMP+
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGV--LPDAYTFSAIFKAFSELGLVRYGR 121
++++N +I +V G A+ ++ M+ EGV +PD YT+ + KA EL ++ G
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
HG ++ D +V +AL+ MY F K+ A VFD + +DV+ + +I+GY ++
Sbjct: 138 VVHG-RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
G +AL +F MV+ V + T+ S L CG+L D G+ +H + + L + +
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
+L+ MY +C ++++ VF+++ +TWT + G ++G E A+ + R M V
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
PN T++S++ C G+ +H + + + +LI++Y KC VD V
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F ++ +++I QN +AL LFKR+++ + PN T S+L A +
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADL 436
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRT 477
+ + ++ + + + T ++ + + E A + N + + DVVLW
Sbjct: 437 RQAMNIHCYLTKTGFMS-SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 478 LLNACRIHGEIEMAEKIMRKVLQ 500
L++ +HG+ A ++ ++++
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVR 518
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/586 (30%), Positives = 317/586 (54%), Gaps = 8/586 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+S L+ A K VH VI G+ +G L+D Y KC V +A + F E+
Sbjct: 104 FSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS 163
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNM-LVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
E + V+WN++I+ V K A L G M + V DA TF+ + + +
Sbjct: 164 EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK 223
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVL-EKDVVLFTALIAGYAQ 180
+ H + LGL+ ++ + +A++ YA + DA VFD + KD++ + ++IAG+++
Sbjct: 224 QVHAKVLKLGLQ-HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
L A E+F +M V+ + YT L++C + G+ +HG ++K GLE ++
Sbjct: 283 HELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSA 342
Query: 241 QTSLLTMYSR--CSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
+L++MY + +ED++ +F L ++W S + G Q G E AV F +
Sbjct: 343 TNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS 402
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ + + S++L++CS A ++G+QIHA+ TK G N+ ++LI +Y KCG ++ A
Sbjct: 403 EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESA 462
Query: 359 RSVFD-VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNN 417
R F + ++ V+ N+MI YAQ+G G +L LF ++ + + VTF +IL AC++
Sbjct: 463 RKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSH 522
Query: 418 AGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWR 476
GL++EG +L M+ + I+ EH+ +DLLGR+ +A LI + NPD ++ +
Sbjct: 523 TGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLK 582
Query: 477 TLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLK 536
T L CR GEIEMA ++ +L++ P D T++ L+++Y+ KW + +K +++
Sbjct: 583 TFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERG 642
Query: 537 LKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTL 582
+KK P SW+++ +V F A D S+P +I+ M+ +L ++ + L
Sbjct: 643 VKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWL 688
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 218/419 (52%), Gaps = 12/419 (2%)
Query: 20 LRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVS 78
L H + I G S + ++++D YIK G + A LFDEMP+R V+WN+MIS + S
Sbjct: 19 LSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTS 78
Query: 79 HGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVF 138
GK + A L+ M G D Y+FS + K + + G + HGL + G E +V+
Sbjct: 79 CGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC-NVY 137
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM-VDR 197
V S+LVDMYAK +++ DA F + E + V + ALIAG+ Q A + M +
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 198 RVKPNEYTLASTLASCGNLGDSVNGQL---IHGFIVKSGLESFVASQTSLLTMYSRCSMV 254
V + T A L L D + L +H ++K GL+ + ++++ Y+ C V
Sbjct: 198 AVTMDAGTFAPLLTL---LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 255 EDSVKVFNQLAYASH-VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA 313
D+ +VF+ L + ++W S + G ++ +E A +F +M R V + +T + +L A
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 314 CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGK--CGNVDKARSVFDVLTELDLV 371
CS + G+ +H + K G+E A ALI++Y + G ++ A S+F+ L DL+
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 372 SVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF 430
S NS+I +AQ G +A++ F ++ + + F ++L +C++ ++ G Q+ A
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHAL 433
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 184/378 (48%), Gaps = 14/378 (3%)
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H A+ G + D++V++ ++D Y KF + A+++FD + ++D V + +I+GY G
Sbjct: 23 HCYAIKCG-SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
+A +F M + Y+ + L ++ G+ +HG ++K G E V +S
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM-IRCSVSP 302
L+ MY++C VED+ + F +++ + V+W + + G VQ + A + M ++ +V+
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ T + +L + +Q+HA KLG++ A+I+ Y CG+V A+ VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 363 DVL-TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
D L DL+S NSMI ++++ A +LF ++++ + + T+ +L AC+
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG---- 317
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLL------GRSKRFEEAAMLINEVTNPDVVLW 475
E Q+F + I+ E T + L + E+A L + + D++ W
Sbjct: 318 -EEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISW 376
Query: 476 RTLLNACRIHGEIEMAEK 493
+++ G E A K
Sbjct: 377 NSIITGFAQKGLSEDAVK 394
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 306/547 (55%), Gaps = 11/547 (2%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLF---DE 60
+S+I+ C + VHA V SGF + LI Y K G + + ++F D+
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ ++IV N MI++ K +A+ L+ ML EG+ D ++ ++ L L G
Sbjct: 415 IQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---G 469
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
++ HG + GL VLD+ V S+L +Y+K + +++ +F + KD + ++I+G+ +
Sbjct: 470 KQVHGYTLKSGL-VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
G EA+ +F EM+D P+E TLA+ L C + G+ IHG+ +++G++ +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
++L+ MYS+C ++ + +V+++L V+ +S + G Q+G + +FR+M+
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
+ + F +SSIL+A + +G Q+HA TK+G+ G++L+ +Y K G++D
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCK 708
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
F + DL++ ++I +YAQ+G EALQ++ +K+ G P+ VTF+ +L AC++ GL
Sbjct: 709 AFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGL 768
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLL 479
VEE M ++ IE H+ CM+D LGRS R EA IN + PD ++W TLL
Sbjct: 769 VEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLL 828
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
AC+IHGE+E+ + +K ++L P D G +I L+N+ A G+W++V E + ++ ++K
Sbjct: 829 AACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQK 888
Query: 540 SPARSWV 546
P S V
Sbjct: 889 EPGWSSV 895
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 244/490 (49%), Gaps = 12/490 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y S+I+ C+ ++ V H I G F Y ++ LID + K +A K+F +
Sbjct: 153 YGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSL 212
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
++ WN++I+ + + +L+ M V PD+YT+S++ A + L +R+G+
Sbjct: 213 SANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKV 272
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
+ G E DVFV +A+VD+YAK M +A VF R+ VV +T +++GY +S
Sbjct: 273 VQARVIKCGAE--DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG--LESFVAS 240
ALE+F+EM V+ N T+ S +++CG +H ++ KSG L+S VA+
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA 390
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTS-FVVGLVQNGREEVAVSVFREMIRCS 299
+L++MYS+ ++ S +VF L + + Q+ + A+ +F M++
Sbjct: 391 --ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEG 448
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
+ + F++ S+L S +G+Q+H T K G+ + G++L LY KCG+++++
Sbjct: 449 LRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESY 505
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
+F + D SMI + + G+ EA+ LF + G +P+ T ++L C++
Sbjct: 506 KLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHP 565
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
+ G ++ + I+ + + ++++ + + A + + + D V +L+
Sbjct: 566 SLPRGKEIHGYTL-RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLI 624
Query: 480 NACRIHGEIE 489
+ HG I+
Sbjct: 625 SGYSQHGLIQ 634
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 240/477 (50%), Gaps = 18/477 (3%)
Query: 36 LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE 95
L L+ Y GS+A+A KLFD +P+ +V+ N MIS + H ++++ + M
Sbjct: 85 FLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFL 144
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
G + ++ ++ A S L + + +G +V V SAL+D+++K + D
Sbjct: 145 GFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV-VESALIDVFSKNLRFED 203
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
A+ VF L +V + +IAG ++ G ++F EM KP+ YT +S LA+C +
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 216 LGDSVNGQLIHGFIVKSGLES-FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTS 274
L G+++ ++K G E FV T+++ +Y++C + ++++VF+++ S V+WT
Sbjct: 264 LEKLRFGKVVQARVIKCGAEDVFVC--TAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 275 FVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG 334
+ G ++ A+ +F+EM V N T++S++ AC +M Q+HA K G
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVS-VNSMIYAYAQNGFGYEALQLF 393
+ AALI++Y K G++D + VF+ L ++ + VN MI +++Q+ +A++LF
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLF 441
Query: 394 KRIKKLGLAPNGVTFISIL--LACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLL 451
R+ + GL + + S+L L C N G G L K+ ++LT + + L
Sbjct: 442 TRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTL----KSGLVLDLTVG--SSLFTLY 495
Query: 452 GRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGT 508
+ EE+ L + D W ++++ +G + A + ++L D GT
Sbjct: 496 SKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML-----DDGT 547
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 149/297 (50%), Gaps = 1/297 (0%)
Query: 135 LDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM 194
DVF+ +L+ Y+ M DA +FD + + DVV +I+GY Q L E+L F +M
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM 141
Query: 195 VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMV 254
+ NE + S +++C L + +L+ +K G + +++L+ ++S+
Sbjct: 142 HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 255 EDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQAC 314
ED+ KVF A+ W + + G ++N +F EM P+ +T SS+L AC
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 315 SSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVN 374
+S G+ + A K G E + A+++LY KCG++ +A VF + +VS
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320
Query: 375 SMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM 431
M+ Y ++ + AL++FK ++ G+ N T S++ AC +V E Q+ A++
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWV 377
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/604 (30%), Positives = 313/604 (51%), Gaps = 13/604 (2%)
Query: 2 NFYSSLITQ-CAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFD 59
NF + + CA + VHAH+I S F S +G +D ++KC SV A K+F+
Sbjct: 52 NFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFE 111
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
MPER TWN+M+S G + +A L+ M + + PD+ T + ++ S ++
Sbjct: 112 RMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKL 171
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKD--VVLFTALIAG 177
H + + LG++V V VA+ + Y K + A LVF+ + D VV + ++
Sbjct: 172 LEAMHAVGIRLGVDV-QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF 237
Y+ G +A ++ M+ KP+ T + ASC N G+LIH + G +
Sbjct: 231 YSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQD 290
Query: 238 VASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR 297
+ + + ++MYS+ + +F+ + + V+WT + G + G + A+++F MI+
Sbjct: 291 IEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIK 350
Query: 298 CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGME-GNKDAGAALINLYGKCGNVD 356
P+ TL S++ C E G+ I A G + N ALI++Y KCG++
Sbjct: 351 SGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIH 410
Query: 357 KARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN 416
+AR +FD E +V+ +MI YA NG EAL+LF ++ L PN +TF+++L AC
Sbjct: 411 EARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACA 470
Query: 417 NAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLI-NEVTNPDVVLW 475
++G +E+G + F MK +NI +H++CM+DLLGR + EEA LI N PD +W
Sbjct: 471 HSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIW 530
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDL 535
LLNAC+IH +++AE+ + L P ++ + N+YA+AG W+ +++ ++
Sbjct: 531 GALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQR 590
Query: 536 KLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDL 595
+KK P S + V+ + H+F G+ H I+ L+ L AK D + +D+
Sbjct: 591 NIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAK------DKHVLYKDV 644
Query: 596 HEEK 599
++E+
Sbjct: 645 YKEQ 648
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 202/455 (44%), Gaps = 15/455 (3%)
Query: 55 RKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSEL 114
R+L+ + WN I V+ +++ L+ M G P+ +TF + KA + L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 115 GLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTAL 174
V H ++ DVFV +A VDM+ K + + A VF+R+ E+D + A+
Sbjct: 66 ADVGCCEMVHA-HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 124
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL 234
++G+ QSG +A +FREM + P+ T+ + + S + +H ++ G+
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV 184
Query: 235 ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH--VTWTSFVVGLVQNGREEVAVSVF 292
+ V + ++ Y +C ++ + VF + V+W S G A ++
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 293 REMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKC 352
M+R P+ T ++ +C + G IH+ LG + + +A I++Y K
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 353 GNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISIL 412
+ AR +FD++T VS MI YA+ G EAL LF + K G P+ VT +S++
Sbjct: 305 EDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364
Query: 413 LACNNAGLVEEG------CQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINE 466
C G +E G ++ ++N I +ID+ + EA + +
Sbjct: 365 SGCGKFGSLETGKWIDARADIYGCKRDNVMI------CNALIDMYSKCGSIHEARDIFDN 418
Query: 467 VTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQL 501
VV W T++ ++G A K+ K++ L
Sbjct: 419 TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 174/346 (50%), Gaps = 13/346 (3%)
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
E+L +FREM +PN +T +C L D +++H ++KS S V T+ +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
M+ +C+ V+ + KVF ++ TW + + G Q+G + A S+FREM ++P+
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
T+ +++Q+ S ++ E +HA+ +LG++ I+ YGKCG++D A+ VF+ +
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 214
Query: 366 TELD--LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
D +VS NSM AY+ G ++A L+ + + P+ TFI++ +C N + +
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 424 GCQLFAFMKNNHNIELTR----EHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
G + ++H I L E I + +S+ A +L + +T+ V W ++
Sbjct: 275 G-----RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMI 329
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQV 525
+ G+++ A + +++ G+ + L +L + GK+ +
Sbjct: 330 SGYAEKGDMDEALALFHAMIK--SGEKPDLVTLLSLISGCGKFGSL 373
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 311 bits (797), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 288/555 (51%), Gaps = 35/555 (6%)
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVD--RRVKPNEYTLASTLASC 213
A+ + DR + + ++I + +S + ++ + +R ++ +KP+ YT+ + +C
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 214 GNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV--- 270
L G +HG ++ G ++ QT L+++Y+ ++ KVFN + V
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 271 ----------------------------TWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
W + + G Q G A++VF M V
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
N + S+L AC+ + G H+ + ++ L++LY KCG+++KA VF
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+ E ++ + +S + A NGFG + L+LF +K+ G+ PN VTF+S+L C+ G V+
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNA 481
EG + F M+N IE EH+ C++DL R+ R E+A +I ++ P +W +LL+A
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Query: 482 CRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSP 541
R++ +E+ +K+L+L + G ++LL+N+YA + W+ V ++ +++ ++K P
Sbjct: 419 SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 542 ARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKM 601
S ++V+ EVH F GD SHP+ +I + ++ + + GY DT V+ D+ EE+K
Sbjct: 479 GCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKE 538
Query: 602 SSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKR 661
+L HSEK AIAF + + IRI KNLRVCGDCH ++ + R+II RD R
Sbjct: 539 DALCLHSEKAAIAFGIM-SLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNR 597
Query: 662 FHHFKGGLCSCKDYW 676
FHHFK G CSC +W
Sbjct: 598 FHHFKDGHCSCNGFW 612
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 181/386 (46%), Gaps = 44/386 (11%)
Query: 16 SLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAE------ARKLFDEMPERHIVTW 69
+ +R +HA + G L L+ ++K ++++ A ++ D + +
Sbjct: 18 TFKEVRQIHAKLYVDG---TLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFAL 74
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEG--VLPDAYTFSAIFKAFSELGLVRYGRRAHGLA 127
NSMI AH +++ + Y +L G + PD YT + + +A + L + G + HG+
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 128 VVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVL----------------------- 164
+ G + D V + L+ +YA+ + H VF+ +
Sbjct: 135 IRRGFDN-DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFA 193
Query: 165 --------EKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNL 216
E+D + + A+I+GYAQ G EAL VF M VK N + S L++C L
Sbjct: 194 RKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQL 253
Query: 217 GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFV 276
G G+ H +I ++ ++ V T+L+ +Y++C +E +++VF + + TW+S +
Sbjct: 254 GALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSAL 313
Query: 277 VGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQ-IHAITTKLGM 335
GL NG E + +F M + V+PN T S+L+ CS + G++ ++ + G+
Sbjct: 314 NGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGI 373
Query: 336 EGNKDAGAALINLYGKCGNVDKARSV 361
E + L++LY + G ++ A S+
Sbjct: 374 EPQLEHYGCLVDLYARAGRLEDAVSI 399
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 123/238 (51%), Gaps = 3/238 (1%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
++ +CG V ARKLF+ MPER + WN+MIS + G+S++A+ ++ M +EGV +
Sbjct: 180 MVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVN 239
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
++ A ++LG + GR AH +++ V +A+ LVD+YAK M A VF
Sbjct: 240 GVAMISVLSACTQLGALDQGRWAHSYIERNKIKIT-VRLATTLVDLYAKCGDMEKAMEVF 298
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
+ EK+V +++ + G A +G + LE+F M V PN T S L C +G
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 221 NGQL-IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT-WTSFV 276
GQ + G+E + L+ +Y+R +ED+V + Q+ H W+S +
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 84/154 (54%), Gaps = 5/154 (3%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPER 64
S+++ C +L R H+++ + + L L+D Y KCG + +A ++F M E+
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA- 123
++ TW+S ++ +G ++ +EL+ M +GV P+A TF ++ + S +G V G+R
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHF 364
Query: 124 HGLAVVLGLEV-LDVFVASALVDMYAKFDKMRDA 156
+ G+E L+ + LVD+YA+ ++ DA
Sbjct: 365 DSMRNEFGIEPQLEHY--GCLVDLYARAGRLEDA 396
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 314/576 (54%), Gaps = 5/576 (0%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGF--SYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
S +T C + +HA V+ S S + + LI Y +CG + +A ++ +M
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
+VTWNS+I +V + K+A+E + +M+ G D + ++I A L + G
Sbjct: 349 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H + G + ++ V + L+DMY+K + F R+ +KD++ +T +IAGYAQ+
Sbjct: 409 HAYVIKHGWDS-NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
EALE+FR++ +R++ +E L S L + L + + IH I++ GL V Q
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVI-QNE 526
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
L+ +Y +C + + +VF + V+WTS + NG E AV +FR M+ +S +
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
L IL A +S + G +IH + G A++++Y CG++ A++VFD
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFD 646
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
+ L+ SMI AY +G G A++LF +++ ++P+ ++F+++L AC++AGL++E
Sbjct: 647 RIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDE 706
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNAC 482
G M++ + +E EH+ C++D+LGR+ EA + + T P +W LL AC
Sbjct: 707 GRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAAC 766
Query: 483 RIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPA 542
R H E E+ E +++L+L P + G +L++N++A G+WN V +++ ++ ++K P
Sbjct: 767 RSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPG 826
Query: 543 RSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEK 578
SW+++D +VH F A D SHP + EI++ L E+ K
Sbjct: 827 CSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRK 862
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/505 (30%), Positives = 262/505 (51%), Gaps = 15/505 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISS--GFSYCLLGHKLIDGYIKCGSVAEARKLFDEM 61
++ ++ C ++++ R +H+ + + F L KL+ Y KCGS+ +A K+FDEM
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
P+R WN+MI A+VS+G+ A+ LY NM VEGV +F A+ KA ++L +R G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK-DVVLFTALIAGYAQ 180
H L V LG F+ +ALV MYAK D + A +FD EK D VL+ ++++ Y+
Sbjct: 203 ELHSLLVKLGYHSTG-FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES---F 237
SG E LE+FREM PN YT+ S L +C + G+ IH ++KS S +
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 238 VASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR 297
V + +L+ MY+RC + + ++ Q+ A VTW S + G VQN + A+ F +MI
Sbjct: 322 VCN--ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 298 CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDK 357
+ +++SI+ A + G ++HA K G + N G LI++Y KC
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 358 ARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN- 416
F + + DL+S ++I YAQN EAL+LF+ + K + + + SIL A +
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499
Query: 417 -NAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLW 475
+ L+ + K + + E ++D+ G+ + A + + DVV W
Sbjct: 500 LKSMLIVKEIHCHILRKGLLDTVIQNE----LVDVYGKCRNMGYATRVFESIKGKDVVSW 555
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQ 500
+++++ ++G A ++ R++++
Sbjct: 556 TSMISSSALNGNESEAVELFRRMVE 580
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 254/495 (51%), Gaps = 18/495 (3%)
Query: 1 MNFYSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFD 59
++ + +L+ CA + + + +H+ ++ G+ S + + L+ Y K ++ AR+LFD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 60 EMPER-HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
E+ V WNS++S++ + GKS + +EL+ M + G P++YT + A +
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G+ H + +++V +AL+ MY + KM A + ++ DVV + +LI GY
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
Q+ + EALE F +M+ K +E ++ S +A+ G L + + G +H +++K G +S +
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
+L+ MYS+C++ + F ++ ++WT+ + G QN A+ +FR++ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ + L SIL+A S + ++IH + G+ + L+++YGKC N+ A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYA 540
Query: 359 RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNA 418
VF+ + D+VS SMI + A NG EA++LF+R+ + GL+ + V + IL A +
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 419 GLVEEGCQLFAFMKNNHNIELTREHF-------TCMIDLLGRSKRFEEAAMLINEVTNPD 471
+ +G ++ + L R+ F ++D+ + A + + +
Sbjct: 601 SALNKGREIHCY--------LLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 652
Query: 472 VVLWRTLLNACRIHG 486
++ + +++NA +HG
Sbjct: 653 LLQYTSMINAYGMHG 667
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 309/547 (56%), Gaps = 58/547 (10%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
++ GY++ ++ A LF EMPER++V+WN+MI + G+ +A+EL+ M ++
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV-- 172
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
+++++ KA LV+ GR + + + DV +A+VD AK K+ +A +F
Sbjct: 173 --SWNSMVKA-----LVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
D + E++++ + A+I GYAQ+ EA ++F+ M +R
Sbjct: 226 DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF--------------------- 264
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLV 280
AS +++T + R + + +F+++ + ++WT+ + G V
Sbjct: 265 ------------------ASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYV 306
Query: 281 QNGREEVAVSVFREMIR-CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNK 339
+N E A++VF +M+R SV PN T SIL ACS A G+QIH + +K + N+
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 340 DAGAALINLYGKCGNVDKARSVFD--VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK 397
+AL+N+Y K G + AR +FD ++ + DL+S NSMI YA +G G EA++++ +++
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 398 KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRF 457
K G P+ VT++++L AC++AGLVE+G + F + + ++ L EH+TC++DL GR+ R
Sbjct: 427 KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRL 486
Query: 458 EEAAMLINEVTNPDVVLWRT----LLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLT 513
++ IN D L R+ +L+AC +H E+ +A+++++KVL+ D GT++L++
Sbjct: 487 KDVTNFIN---CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMS 543
Query: 514 NLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLH 573
N+YA+ GK + EM+ +++ LKK P SWV V ++ H F+ GD SHP+ + +L
Sbjct: 544 NIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILS 603
Query: 574 ELIEKAK 580
+L K +
Sbjct: 604 DLRNKMR 610
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 161/334 (48%), Gaps = 22/334 (6%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL 98
+ ++ ++ G + EA LF+ MP R +V+W +M+ +GK +A L+ M ++
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 234
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
+++A+ +++ + A L V+ D + ++ + + +M A
Sbjct: 235 ----SWNAMITGYAQNNRI---DEADQLFQVMPER--DFASWNTMITGFIRNREMNKACG 285
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV-DRRVKPNEYTLASTLASCGNLG 217
+FDR+ EK+V+ +T +I GY ++ + EAL VF +M+ D VKPN T S L++C +L
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQ--LAYASHVTWTSF 275
V GQ IH I KS + ++LL MYS+ + + K+F+ + ++W S
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG-EQIHAITTKLG 334
+ +G + A+ ++ +M + P+ T ++L ACS + E G E +
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 335 MEGNKDAGAALINLYGKCG---------NVDKAR 359
+ ++ L++L G+ G N D AR
Sbjct: 466 LPLREEHYTCLVDLCGRAGRLKDVTNFINCDDAR 499
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 302/550 (54%), Gaps = 6/550 (1%)
Query: 17 LTTLRAVHAHVISSGFSYCLLG--HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMIS 74
+T L+ +H + GF C + + +++ Y KC V +A+ LFD+M +R +V+WN+MIS
Sbjct: 160 ITQLQCLHDFAVIYGFD-CDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMIS 218
Query: 75 AHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV 134
+ S G + ++L M +G+ PD TF A + + GR H V G +V
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV 278
Query: 135 LDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM 194
D+ + +AL+ MY K K ++ V + + KDVV +T +I+G + G +AL VF EM
Sbjct: 279 -DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Query: 195 VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMV 254
+ + +AS +ASC LG G +HG++++ G + SL+TMY++C +
Sbjct: 338 LQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHL 397
Query: 255 EDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP-NPFTLSSILQA 313
+ S+ +F ++ V+W + + G QN A+ +F EM +V + FT+ S+LQA
Sbjct: 398 DKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQA 457
Query: 314 CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSV 373
CSS VG+ IH I + + AL+++Y KCG ++ A+ FD ++ D+VS
Sbjct: 458 CSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSW 517
Query: 374 NSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKN 433
+I Y +G G AL+++ G+ PN V F+++L +C++ G+V++G ++F+ M
Sbjct: 518 GILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
Query: 434 NHNIELTREHFTCMIDLLGRSKRFEEAAMLINE-VTNPDVVLWRTLLNACRIHGEIEMAE 492
+ +E EH C++DLL R+KR E+A E T P + + +L+ACR +G+ E+ +
Sbjct: 578 DFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVED 637
Query: 493 KIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREV 552
I +++L PGD G ++ L + +A+ +W+ V E +R L LKK P S ++++ +
Sbjct: 638 IICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKT 697
Query: 553 HTFMAGDMSH 562
TF SH
Sbjct: 698 TTFFMNHTSH 707
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/630 (26%), Positives = 311/630 (49%), Gaps = 27/630 (4%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
+ SL+ CA + L+ ++H V+ +GFS + L++ Y K G +A ARK+F+EM
Sbjct: 49 FPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR 108
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER +V W +MI + G +A L M +G+ P T + E+ ++
Sbjct: 109 ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC--- 165
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H AV+ G + D+ V ++++++Y K D + DA +FD++ ++D+V + +I+GYA G
Sbjct: 166 LHDFAVIYGFDC-DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
E L++ M ++P++ T ++L+ G + D G+++H IVK+G + + +T
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+L+TMY +C E S +V + V WT + GL++ GR E A+ VF EM++
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ ++S++ +C+ ++G +H + G + A +LI +Y KCG++DK+ +F
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK-KLGLAPNGVTFISILLACNNAGLV 421
+ + E DLVS N++I YAQN +AL LF+ +K K + T +S+L AC++AG +
Sbjct: 405 ERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGAL 464
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
G +L + I T ++D+ + E A + ++ DVV W L+
Sbjct: 465 PVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAG 523
Query: 482 CRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIE----MKTTIRDLKL 537
HG+ ++A +I + L G H++ + +S V + + +RD +
Sbjct: 524 YGFHGKGDIALEIYSEFLH--SGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV 581
Query: 538 KKSPARSWVDVD--------REVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTR 589
+ + VD + F + + P D+L +++ + G +
Sbjct: 582 EPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPS----IDVLGIILDACRANGKTEVED 637
Query: 590 FVLQDLHEEKKMSSLYYHSEKLAIAFALWK 619
+ +D+ E K + +Y KL +FA K
Sbjct: 638 IICEDMIELKPGDAGHY--VKLGHSFAAMK 665
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 195/413 (47%), Gaps = 5/413 (1%)
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
+NS I+ SHG KQ + + +ML +LPD +TF ++ KA + L + +G H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEAL 188
V G D +++S+LV++YAKF + A VF+ + E+DVV +TA+I Y+++G+ GEA
Sbjct: 74 VNGFSS-DFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 189 EVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMY 248
+ EM + +KP TL L+ + Q +H F V G + +A S+L +Y
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEI---TQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 249 SRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLS 308
+C V D+ +F+Q+ V+W + + G G + + M + P+ T
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 309 SILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL 368
+ L + E+G +H K G + + ALI +Y KCG + + V + +
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 369 DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLF 428
D+V MI + G +AL +F + + G + S++ +C G + G +
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 429 AFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
++ H L +I + + +++ ++ + D+V W +++
Sbjct: 370 GYVL-RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISG 421
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 154/334 (46%), Gaps = 12/334 (3%)
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
F + I + G + L F M+ ++ P+ +T S L +C +L G IH ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVS 290
+G S +SL+ +Y++ ++ + KVF ++ V WT+ + + G A S
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 291 VFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYG 350
+ EM + P P TL +L + +H G + + +++NLY
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 351 KCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFIS 410
KC +V A+ +FD + + D+VS N+MI YA G E L+L R++ GL P+ TF +
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 411 ILLACNNAGLVEEG----CQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINE 466
L +E G CQ+ +K ++++ + T +I + + + E + ++
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQI---VKTGFDVDMHLK--TALITMYLKCGKEEASYRVLET 305
Query: 467 VTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
+ N DVV W +++ G E A + ++LQ
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 27/261 (10%)
Query: 250 RCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSS 309
R S V +S K FN SH+ S +G + +S F M+ + P+ FT S
Sbjct: 3 RTSSVLNSTKYFN-----SHINHLS------SHGDHKQVLSTFSSMLANKLLPDTFTFPS 51
Query: 310 ILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELD 369
+L+AC+S G IH G + ++L+NLY K G + AR VF+ + E D
Sbjct: 52 LLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERD 111
Query: 370 LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE----EGC 425
+V +MI Y++ G EA L ++ G+ P VT + +L +G++E +
Sbjct: 112 VVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML-----SGVLEITQLQCL 166
Query: 426 QLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIH 485
FA + + + M++L + +A L +++ D+V W T+++
Sbjct: 167 HDFAVI---YGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 486 GEIEMAEKIMRKVLQLAPGDG 506
G M+E + K+L GDG
Sbjct: 224 G--NMSEIL--KLLYRMRGDG 240
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 308/554 (55%), Gaps = 16/554 (2%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQA-VELYGNMLVEGVLP 99
LI ++ G + LF E + ++N MI + +A + LY M G+ P
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 130
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
D +T++ +F A ++L + GR H +GLE DV + +L+ MYAK ++ A +
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLE-RDVHINHSLIMMYAKCGQVGYARKL 189
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
FD + E+D V + ++I+GY+++G +A+++FR+M + +P+E TL S L +C +LGD
Sbjct: 190 FDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDL 249
Query: 220 VNGQLIHGFIV--KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVV 277
G+L+ + K GL +F+ S+ L++MY +C ++ + +VFNQ+ V WT+ +
Sbjct: 250 RTGRLLEEMAITKKIGLSTFLGSK--LISMYGKCGDLDSARRVFNQMIKKDRVAWTAMIT 307
Query: 278 GLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEG 337
QNG+ A +F EM + VSP+ TLS++L AC S E+G+QI ++L ++
Sbjct: 308 VYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH 367
Query: 338 NKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK 397
N L+++YGKCG V++A VF+ + + + N+MI AYA G EAL LF R
Sbjct: 368 NIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDR-- 425
Query: 398 KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRF 457
+ + P+ +TFI +L AC +AGLV +GC+ F M + + EH+T +IDLL R+
Sbjct: 426 -MSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGML 484
Query: 458 EEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG-DGGTHILLTNL 515
+EA + PD ++ +L AC ++ + EK MR ++++ + G +++ +N+
Sbjct: 485 DEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNV 544
Query: 516 YASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAG----DMSHPRAHEIFDM 571
A W++ +M+ +RD + K+P SW++++ E+ F+AG + +FD+
Sbjct: 545 LADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDL 604
Query: 572 LHELIEKAK-TLGY 584
L E +++ + GY
Sbjct: 605 LVEEMKRERYEFGY 618
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 187/357 (52%), Gaps = 6/357 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
Y+ + CA + + R+VH+ + G + + H LI Y KCG V ARKLFDE+
Sbjct: 135 YNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEIT 194
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER V+WNSMIS + G +K A++L+ M EG PD T ++ A S LG +R GR
Sbjct: 195 ERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRL 254
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
+A+ + L F+ S L+ MY K + A VF+++++KD V +TA+I Y+Q+G
Sbjct: 255 LEEMAITKKIG-LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNG 313
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
EA ++F EM V P+ TL++ L++CG++G G+ I + L+ + T
Sbjct: 314 KSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVAT 373
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
L+ MY +C VE++++VF + + TW + + G + A+ +F M SV P
Sbjct: 374 GLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPP 430
Query: 303 NPFTLSSILQACSSRAMREVG-EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ T +L AC + G H +++ G+ + +I+L + G +D+A
Sbjct: 431 SDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/657 (28%), Positives = 334/657 (50%), Gaps = 18/657 (2%)
Query: 21 RAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSH 79
+ +H+++I G +L L+D Y + + +A ++ + E+ + W S++S V +
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 80 GKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFV 139
++K+AV + M G+ P+ +T+SAI S + + +G++ H + +G E V
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED-STDV 362
Query: 140 ASALVDMYAKFDKMR-DAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR 198
+ALVDMY K +A VF ++ +VV +T LI G G + + EMV R
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 199 VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSV 258
V+PN TL+ L +C L IH ++++ ++ + SL+ Y+ V+ +
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
V + ++T+TS V + G+ E+A+SV M + + +L + A ++
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
E G+ +H + K G G +L+++Y KCG+++ A+ VF+ + D+VS N ++
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIE 438
A NGF AL F+ ++ P+ VTF+ +L AC+N L + G + F MK +NIE
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIE 662
Query: 439 LTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRK 497
EH+ ++ +LGR+ R EEA ++ + P+ ++++TLL ACR G + + E + K
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANK 722
Query: 498 VLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMA 557
L LAP D +ILL +LY +GK + + + + +L K +S V+V +VH+F++
Sbjct: 723 GLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVS 782
Query: 558 GDMSH-PRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFA 616
D++ + + I+ + + E+ K G SP + + +HS K A+ +
Sbjct: 783 EDVTRVDKTNGIYAEIESIKEEIKRFG-SP-----------YRGNENASFHSAKQAVVYG 830
Query: 617 LWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCK 673
+ + + KN +C DCH ++ +T L + I RD + H FK G CSCK
Sbjct: 831 -FIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 243/486 (50%), Gaps = 9/486 (1%)
Query: 23 VHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
+H VI G L L + L+ Y+K + ARKLFDEM R + W MISA +
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 82 SKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVAS 141
A+ L+ M+ G P+ +TFS++ ++ + L + YG R HG + G E V V S
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV-VGS 163
Query: 142 ALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKP 201
+L D+Y+K + ++A +F + D + +T +I+ + EAL+ + EMV V P
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 202 NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF 261
NE+T L + LG G+ IH I+ G+ V +TSL+ YS+ S +ED+V+V
Sbjct: 224 NEFTFVKLLGASSFLGLEF-GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVL 282
Query: 262 NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
N WTS V G V+N R + AV F EM + PN FT S+IL CS+ +
Sbjct: 283 NSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLD 342
Query: 322 VGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVD-KARSVFDVLTELDLVSVNSMIYAY 380
G+QIH+ T K+G E + D G AL+++Y KC + +A VF + ++VS ++I
Sbjct: 343 FGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGL 402
Query: 381 AQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELT 440
+GF + L + K + PN VT +L AC+ V ++ A++ H ++
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGE 461
Query: 441 REHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
++D S++ + A +I + D + + +L+ G+ EMA V+
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMA----LSVIN 517
Query: 501 LAPGDG 506
GDG
Sbjct: 518 YMYGDG 523
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 251/491 (51%), Gaps = 7/491 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+SS++ CA + ++ VH VI +GF ++G L D Y KCG EA +LF +
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
++W MIS+ V K ++A++ Y M+ GV P+ +TF + A S LGL +G+
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKT 245
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H +V G+ L+V + ++LVD Y++F KM DA V + E+DV L+T++++G+ ++
Sbjct: 246 IHSNIIVRGIP-LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
EA+ F EM ++PN +T ++ L+ C + G+ IH +K G E
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN 364
Query: 243 SLLTMYSRCSMVE-DSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
+L+ MY +CS E ++ +VF + + V+WT+ ++GLV +G + + EM++ V
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 302 PNPFTLSSILQACSS-RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
PN TLS +L+ACS R +R V E IHA + ++G G +L++ Y VD A +
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLE-IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
V + D ++ S++ + + G AL + + G+ + ++ + A N G
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLN 480
+E G L + + ++D+ + E+A + E+ PDVV W L++
Sbjct: 544 LETGKHLHCYSVKS-GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 481 ACRIHGEIEMA 491
+G I A
Sbjct: 603 GLASNGFISSA 613
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 209/422 (49%), Gaps = 17/422 (4%)
Query: 2 NF-YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKC-GSVAEARKLF 58
NF YS++++ C+ +SL + +H+ I GF +G+ L+D Y+KC S EA ++F
Sbjct: 325 NFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 59 DEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
M ++V+W ++I V HG + L M+ V P+ T S + +A S+L R
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL---R 441
Query: 119 YGRRAHGLAVVLGLEVLD--VFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIA 176
+ RR + L +D + V ++LVD YA K+ A V + +D + +T+L+
Sbjct: 442 HVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVT 501
Query: 177 GYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES 236
+ + G AL V M ++ ++ +L +++ NLG G+ +H + VKSG
Sbjct: 502 RFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSG 561
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI 296
+ SL+ MYS+C +ED+ KVF ++A V+W V GL NG A+S F EM
Sbjct: 562 AASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMR 621
Query: 297 RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKL-GMEGNKDAGAALINLYGKCGNV 355
P+ T +L ACS+ + ++G + + K+ +E + L+ + G+ G +
Sbjct: 622 MKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRL 681
Query: 356 DKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA-LQLFKRI--KKLGLAPNGVTFISIL 412
++A V + + + N+MI+ Y L L + + K L LAP+ + IL
Sbjct: 682 EEATGVVETMH----LKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPA-LYIL 736
Query: 413 LA 414
LA
Sbjct: 737 LA 738
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 197/400 (49%), Gaps = 19/400 (4%)
Query: 110 AFSELGLVRYGRRAHGLAVVLGL-EVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDV 168
+F E R G H + GL E LD+ + L+ +Y K D + +A +FD + + V
Sbjct: 32 SFCESNSSRIGLHIHCPVIKFGLLENLDL--CNNLLSLYLKTDGIWNARKLFDEMSHRTV 89
Query: 169 VLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGF 228
+T +I+ + +S AL +F EM+ PNE+T +S + SC L D G +HG
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 229 IVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVA 288
++K+G E +SL +YS+C +++ ++F+ L A ++WT + LV + A
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209
Query: 289 VSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
+ + EM++ V PN FT +L A S + E G+ IH+ G+ N +L++
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDF 268
Query: 349 YGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTF 408
Y + ++ A V + E D+ S++ + +N EA+ F ++ LGL PN T+
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTY 328
Query: 409 ISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT----CMIDLLGRSKRFE-EAAML 463
+IL C+ ++ G Q+ ++ I++ E T ++D+ + E EA+ +
Sbjct: 329 SAILSLCSAVRSLDFGKQI-----HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV 383
Query: 464 INEVTNPDVVLWRTLLNACRIHGEIE-----MAEKIMRKV 498
+ +P+VV W TL+ HG ++ + E + R+V
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 248/420 (59%), Gaps = 6/420 (1%)
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR-CSVSPNPFTLSSILQACSSR 317
KV + + +TW + G V+N + E A+ + M+ + PN F+ +S L AC+
Sbjct: 119 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL 178
Query: 318 AMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMI 377
+ +H++ G+E N +AL+++Y KCG++ +R VF + D+ N+MI
Sbjct: 179 GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMI 238
Query: 378 YAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
+A +G EA+++F ++ ++P+ +TF+ +L C++ GL+EEG + F M +I
Sbjct: 239 TGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSI 298
Query: 438 ELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMR 496
+ EH+ M+DLLGR+ R +EA LI + PDVV+WR+LL++ R + E+ E ++
Sbjct: 299 QPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQ 358
Query: 497 KVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFM 556
L+ G ++LL+N+Y+S KW +++ + ++K+ +SW++ +H F
Sbjct: 359 ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFK 415
Query: 557 AGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFA 616
AGD SH I+ +L LI+K K+ G+ DT VL D+ EE+K +L YHSEKLA+A+
Sbjct: 416 AGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYV 475
Query: 617 LWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
+ K+ T IRI KN+R+C DCH+WIK V+ L R II RD RFH F+ GLCSC+DYW
Sbjct: 476 ILKS-SPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 12/243 (4%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNML-VEGVLP 99
+I+ +K G A+K+ +++++TWN MI +V + + ++A++ NML + P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
+ ++F++ A + LG + + + H L + G+E L+ ++SALVD+YAK + + V
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIE-LNAILSSALVDVYAKCGDIGTSREV 222
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
F V DV ++ A+I G+A GL EA+ VF EM V P+ T L +C + G
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 220 VNGQLIHG-----FIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT-WT 273
G+ G F ++ LE + A ++ + R V+++ ++ + V W
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGA----MVDLLGRAGRVKEAYELIESMPIEPDVVIWR 338
Query: 274 SFV 276
S +
Sbjct: 339 SLL 341
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 124/248 (50%), Gaps = 6/248 (2%)
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVD-RRVKPNEYTLASTLASCG 214
A V +++V+ + +I GY ++ EAL+ + M+ +KPN+++ AS+LA+C
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 215 NLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTS 274
LGD + + +H ++ SG+E ++L+ +Y++C + S +VF + W +
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 275 FVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITT-KL 333
+ G +G A+ VF EM VSP+ T +L CS + E G++ + + +
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 334 GMEGNKDAGAALINLYGKCGNVDKARSVFDVLT-ELDLVSVNSMIYA---YAQNGFGYEA 389
++ + A+++L G+ G V +A + + + E D+V S++ + Y G A
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA 356
Query: 390 LQLFKRIK 397
+Q + K
Sbjct: 357 IQNLSKAK 364
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 118/238 (49%), Gaps = 16/238 (6%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
++S + CA L + VH+ +I SG +L L+D Y KCG + +R++F +
Sbjct: 168 FASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+ WN+MI+ +HG + +A+ ++ M E V PD+ TF + S GL+ G+
Sbjct: 228 RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE 287
Query: 123 AHGL-----AVVLGLEVLDVFVASALVDMYAKFDKMRDAH-LVFDRVLEKDVVLFTALIA 176
GL ++ LE A+VD+ + ++++A+ L+ +E DVV++ +L++
Sbjct: 288 YFGLMSRRFSIQPKLEHY-----GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Query: 177 GYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL 234
+++ + E E+ + + + K +Y L S + S +S Q + + K G+
Sbjct: 343 S-SRTYKNPELGEIAIQNLS-KAKSGDYVLLSNIYSSTKKWES--AQKVRELMSKEGI 396
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 296/539 (54%), Gaps = 22/539 (4%)
Query: 1 MNFYSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFD 59
+N +L+T + K+L + VHA VI GF +LG L + YI+ + A F+
Sbjct: 4 VNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFN 63
Query: 60 EMP--ERHIVTWNSMISAHVSHGKSKQAVELYGNMLV---------EGVLPDAYTFSAIF 108
+P +R+ +WN+++S G SK Y ++L+ +GV D++
Sbjct: 64 RIPCWKRNRHSWNTILS-----GYSKSKTCCYSDVLLLYNRMRRHCDGV--DSFNLVFAI 116
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDV 168
KA LGL+ G HGLA+ GL+ D +VA +LV+MYA+ M A VFD + ++
Sbjct: 117 KACVGLGLLENGILIHGLAMKNGLDK-DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 169 VLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGF 228
VL+ L+ GY + D E +F M D + + TL + +CGN+ G+ +HG
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 229 -IVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEV 287
I +S ++ Q S++ MY +C +++++ K+F + V WT+ + G + R
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 288 AVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALIN 347
A +FR+M+R S+ PN TL++IL +CSS G+ +H + G+E + + I+
Sbjct: 296 AFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFID 355
Query: 348 LYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVT 407
+Y +CGN+ AR+VFD++ E +++S +SMI A+ NG EAL F ++K + PN VT
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVT 415
Query: 408 FISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLI-NE 466
F+S+L AC+++G V+EG + F M ++ + EH+ CM+DLLGR+ EA I N
Sbjct: 416 FVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNM 475
Query: 467 VTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQV 525
P W LL+ACRIH E+++A +I K+L + P ++LL+N+YA AG W V
Sbjct: 476 PVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMV 534
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 313/593 (52%), Gaps = 72/593 (12%)
Query: 18 TTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHV 77
T+LR G+S+ + ++ G+ K G ++ AR+LF+ MPE+ +VT NS++ ++
Sbjct: 111 TSLRFFDMMPERDGYSW----NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYI 166
Query: 78 SHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDV 137
+G +++A+ L+ + DA T + + KA +EL ++ G++ H ++ G+E D
Sbjct: 167 LNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVEC-DS 222
Query: 138 FVASALVDMYAKFDKMRDAHLVFDRVLEKD------------------------------ 167
+ S+LV++YAK +R A + +++ E D
Sbjct: 223 KMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNR 282
Query: 168 -VVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIH 226
V+L+ ++I+GY + + EAL +F EM + + + TLA+ + +C LG G+ +H
Sbjct: 283 CVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMH 341
Query: 227 GFIVKSGLESFVASQTSLLTMYSRC----------------------SMV---------E 255
K GL + ++LL MYS+C SM+ +
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRID 401
Query: 256 DSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS 315
D+ +VF ++ S ++W S G QNG + F +M + + + +LSS++ AC+
Sbjct: 402 DAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACA 461
Query: 316 SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNS 375
S + E+GEQ+ A T +G++ ++ ++LI+LY KCG V+ R VFD + + D V NS
Sbjct: 462 SISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNS 521
Query: 376 MIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
MI YA NG G+EA+ LFK++ G+ P +TF+ +L ACN GLVEEG +LF MK +H
Sbjct: 522 MISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH 581
Query: 436 NIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKI 494
+EHF+CM+DLL R+ EEA L+ E+ + D +W ++L C +G M +K
Sbjct: 582 GFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKA 641
Query: 495 MRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVD 547
K+++L P + ++ L+ ++A++G W ++ +R+ + K+P SW D
Sbjct: 642 AEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 176/409 (43%), Gaps = 75/409 (18%)
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
R+ +GL + G V VA+ L+ MY++ KM A +FD + +++ + +I GY
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
SG G +L F M +R G S N +V SG
Sbjct: 106 SGEKGTSLRFFDMMPERD------------------GYSWN-------VVVSG------- 133
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+++ + + ++FN + VT S + G + NG E A+ +F+E+ +
Sbjct: 134 -------FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NF 183
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGN------ 354
S + TL+++L+AC+ + G+QIHA G+E + ++L+N+Y KCG+
Sbjct: 184 SADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASY 243
Query: 355 -------------------------VDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA 389
V+++R +FD + ++ NSMI Y N EA
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEA 303
Query: 390 LQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMID 449
L LF ++ + T +++ AC G +E G Q+ I+ T ++D
Sbjct: 304 LVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST-LLD 361
Query: 450 LLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
+ + EA L +EV + D +L +++ G I+ A+++ ++
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERI 410
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
SS+I+ CA SL V A G S ++ LID Y KCG V R++FD M +
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
V WNSMIS + ++G+ +A++L+ M V G+ P TF + A + GLV GR+
Sbjct: 514 SDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 124 -HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA-HLVFDRVLEKDVVLFTALIAGYAQS 181
+ V G V D S +VD+ A+ + +A +LV + + D ++++++ G +
Sbjct: 574 FESMKVDHGF-VPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVAN 632
Query: 182 G 182
G
Sbjct: 633 G 633
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/551 (31%), Positives = 298/551 (54%), Gaps = 8/551 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
Y ++ CA +++ + +H+HV S F+ + + L+D Y KCG + A K+FDEMP
Sbjct: 106 YPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNML-VEGVLPDAYTFSAIFKAFSELGLVRYGR 121
+R +V WN+MIS H + L+ +M ++G+ P+ T +F A G +R G+
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
HG +G D+ V + ++D+YAK + A VFD +K+ V ++A+I GY ++
Sbjct: 226 AVHGYCTRMGFSN-DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 182 GLDGEALEVFREMV--DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
+ EA EVF +M+ D + L C GD G+ +H + VK+G +
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT 344
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
Q ++++ Y++ + D+ + F+++ +++ S + G V N R E + +F EM
Sbjct: 345 VQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG 404
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
+ P+ TL +L ACS A G H G N AL+++Y KCG +D A+
Sbjct: 405 IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAK 464
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
VFD + + D+VS N+M++ + +G G EAL LF +++ G+ P+ VT ++IL AC+++G
Sbjct: 465 RVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSG 524
Query: 420 LVEEGCQLFAFM-KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRT 477
LV+EG QLF M + + N+ +H+ CM DLL R+ +EA +N++ PD+ + T
Sbjct: 525 LVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGT 584
Query: 478 LLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKL 537
LL+AC + E+ ++ +K+ L + +LL+N Y++A +W ++ + L
Sbjct: 585 LLSACWTYKNAELGNEVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGL 643
Query: 538 KKSPARSWVDV 548
K+P SWVDV
Sbjct: 644 LKTPGYSWVDV 654
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 238/497 (47%), Gaps = 23/497 (4%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVI--SSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEM 61
+ SL+ C +++L + +H H++ S S + L Y C V AR +FDE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 62 PERHI--VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
P I + W+ MI A+ S+ +++A++LY ML GV P YT+ + KA + L +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G+ H V D++V +ALVD YAK ++ A VFD + ++D+V + A+I+G++
Sbjct: 122 GKLIHS-HVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 180 QSGLDGEALEVFREMVDRRV---KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES 236
+ + +F +M RR+ PN T+ + G G G+ +HG+ + G +
Sbjct: 181 LHCCLTDVIGLFLDM--RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI 296
+ +T +L +Y++ + + +VF+ + VTW++ + G V+N + A VF +M+
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 297 RCSVSPN-----PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGK 351
V+ N P + IL C+ G +H K G + +I+ Y K
Sbjct: 299 ---VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK 355
Query: 352 CGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISI 411
G++ A F + D++S NS+I N E+ +LF ++ G+ P+ T + +
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGV 415
Query: 412 LLACNNAGLVEEG--CQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN 469
L AC++ + G C + + H + ++D+ + + + A + + +
Sbjct: 416 LTACSHLAALGHGSSCHGYCVV---HGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK 472
Query: 470 PDVVLWRTLLNACRIHG 486
D+V W T+L IHG
Sbjct: 473 RDIVSWNTMLFGFGIHG 489
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 178/367 (48%), Gaps = 18/367 (4%)
Query: 143 LVDMYAKFDKMRDAHLVFDRVLEKDV--VLFTALIAGYAQSGLDGEALEVFREMVDRRVK 200
L +YA +++ A VFD + + + + +I YA + +AL+++ +M++ V+
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR 100
Query: 201 PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKV 260
P +YT L +C L +G+LIH + S + + T+L+ Y++C +E ++KV
Sbjct: 101 PTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKV 160
Query: 261 FNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS-VSPNPFTLSSILQACS-SRA 318
F+++ V W + + G + + +F +M R +SPN T+ + A + A
Sbjct: 161 FDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGA 220
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
+RE G+ +H T++G + ++++Y K + AR VFD+ + + V+ ++MI
Sbjct: 221 LRE-GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFIS------ILLACNNAGLVEEG-CQLFAFM 431
Y +N EA ++F ++ L + V ++ IL+ C G + G C +
Sbjct: 280 GYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAV 335
Query: 432 KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMA 491
K ++LT ++ +I + +A +E+ DV+ + +L+ C ++ E +
Sbjct: 336 KAGFILDLTVQN--TIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEES 393
Query: 492 EKIMRKV 498
++ ++
Sbjct: 394 FRLFHEM 400
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 300/555 (54%), Gaps = 16/555 (2%)
Query: 20 LRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAE----ARKLFDEMPERHIVTWNSMISA 75
L+ +H +++S Y L +C + A AR+L ++ I W+S+I
Sbjct: 17 LKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI-G 75
Query: 76 HVSHG---KSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGL 132
H S G + + Y +M GV+P +TF + KA +L + H V GL
Sbjct: 76 HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGL 134
Query: 133 EVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFR 192
+ D FV ++L+ Y+ A +FD +KDVV +TA+I G+ ++G EA+ F
Sbjct: 135 DS-DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFV 193
Query: 193 EMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG---LESFVASQTSLLTMYS 249
EM V NE T+ S L + G + D G+ +HG +++G + F+ S SL+ MY
Sbjct: 194 EMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGS--SLVDMYG 251
Query: 250 RCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSS 309
+CS +D+ KVF+++ + VTWT+ + G VQ+ + + VF EM++ V+PN TLSS
Sbjct: 252 KCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSS 311
Query: 310 ILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELD 369
+L AC+ G ++H K +E N AG LI+LY KCG +++A VF+ L E +
Sbjct: 312 VLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKN 371
Query: 370 LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFA 429
+ + +MI +A +G+ +A LF + ++PN VTF+++L AC + GLVEEG +LF
Sbjct: 372 VYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFL 431
Query: 430 FMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEI 488
MK N+E +H+ CM+DL GR EEA LI + P V+W L +C +H +
Sbjct: 432 SMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDY 491
Query: 489 EMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDV 548
E+ + +V++L P G + LL NLY+ + W++V ++ ++D ++ KSP SW++V
Sbjct: 492 ELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEV 551
Query: 549 DREVHTFMAGDMSHP 563
++ F+A D P
Sbjct: 552 KGKLCEFIAFDDKKP 566
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
SS+++ CAH +L R VH ++I + G LID Y+KCG + EA +F+ + E
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE 369
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+++ TW +MI+ +HG ++ A +L+ ML V P+ TF A+ A + GLV GRR
Sbjct: 370 KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRR 428
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 284/530 (53%), Gaps = 42/530 (7%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLP 99
++ GY K G + +AR LFD M ER+++TW +MI + G + L+ M EG V
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
++ T + +FKA + R G + HGL + LE D+F+ ++L+ MY+K M +A V
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLE-FDLFLGNSLMSMYSKLGYMGEAKAV 332
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
F + KD V + +LI G Q EA E+F +M P + ++ T
Sbjct: 333 FGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM------PGKDMVSWT---------- 376
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
+I GF K + S+C V++F + ++TWT+ +
Sbjct: 377 ---DMIKGFSGKGEI--------------SKC------VELFGMMPEKDNITWTAMISAF 413
Query: 280 VQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNK 339
V NG E A+ F +M++ V PN +T SS+L A +S A G QIH K+ + +
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Query: 340 DAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKL 399
+L+++Y KCGN + A +F ++E ++VS N+MI Y+ NGFG +AL+LF ++
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESS 533
Query: 400 GLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEE 459
G PNGVTF+++L AC + G V+ G + F MK+++NIE +H+ CM+DLLGRS ++
Sbjct: 534 GKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDD 593
Query: 460 AAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYAS 518
A+ LI+ + P +W +LL+A + H +++AE +K+++L P +++L+ LY+
Sbjct: 594 ASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSI 653
Query: 519 AGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEI 568
GK + + ++KK P SW+ + EVH F+AGD S EI
Sbjct: 654 IGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 214/503 (42%), Gaps = 99/503 (19%)
Query: 42 IDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNM--------- 92
I + + G++ EA +F +M R IV+W +MISA+ +GK +A +++ M
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYN 116
Query: 93 -LVEGVLPDAYTFSAIFKAFSEL-------------GLVRYGR----------------- 121
++ ++ + ++ F ++ G VR GR
Sbjct: 117 AMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRD 176
Query: 122 ------------RA----HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE 165
RA + V G+ V +V S++V Y K ++ DA +FDR+ E
Sbjct: 177 SVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE 236
Query: 166 KDVVLFTALIAGYAQSGLDGEALEVFREM-VDRRVKPNEYTLASTLASCGNLGDSVNGQL 224
++V+ +TA+I GY ++G + +F M + VK N TLA +C + G
Sbjct: 237 RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQ 296
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGR 284
IHG + + LE + SL++MYS+ + ++ VF + V+W S + GLVQ +
Sbjct: 297 IHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQ 356
Query: 285 EEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAA 344
A +F +M + M + I + K
Sbjct: 357 ISEAYELFEKM-------------------PGKDMVSWTDMIKGFSGK------------ 385
Query: 345 LINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPN 404
G + K +F ++ E D ++ +MI A+ NG+ EAL F ++ + + PN
Sbjct: 386 --------GEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 405 GVTFISILLACNNAGLVEEGCQLFA-FMKNNHNIELTREHFTCMIDLLGRSKRFEEAAML 463
TF S+L A + + EG Q+ +K N +L+ ++ ++ + + +A +
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQN--SLVSMYCKCGNTNDAYKI 495
Query: 464 INEVTNPDVVLWRTLLNACRIHG 486
+ ++ P++V + T+++ +G
Sbjct: 496 FSCISEPNIVSYNTMISGYSYNG 518
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 159/331 (48%), Gaps = 41/331 (12%)
Query: 36 LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE 95
LG+ L+ Y K G + EA+ +F M + V+WNS+I+ V + +A EL+ M +
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK 370
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
D +++ + K FS G + S V++
Sbjct: 371 ----DMVSWTDMIKGFSGKGEI-----------------------SKCVEL--------- 394
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
F + EKD + +TA+I+ + +G EAL F +M+ + V PN YT +S L++ +
Sbjct: 395 ----FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATAS 450
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
L D + G IHG +VK + + ++ Q SL++MY +C D+ K+F+ ++ + V++ +
Sbjct: 451 LADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTM 510
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG-EQIHAITTKLG 334
+ G NG + A+ +F + PN T ++L AC ++G + ++ +
Sbjct: 511 ISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYN 570
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
+E D A +++L G+ G +D A ++ +
Sbjct: 571 IEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 195/462 (42%), Gaps = 74/462 (16%)
Query: 137 VFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVD 196
+F ++ + +A+ +++A +F ++ + +V + A+I+ YA++G +A +VF EM
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 197 RRVKPNEYTLASTLASCGNLGDSVN-------------GQLIHGFIVKSGLE--SFVASQ 241
R + + + + +LG + +I GF+ + F+ ++
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 242 TS-----------LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVS 290
T LL+ Y R ++V+VF +A V+ +S V G + GR A S
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 291 VFREMI--------------------------------RCSVSPNPFTLSSILQACSSRA 318
+F M V N TL+ + +AC
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
G QIH + +++ +E + G +L+++Y K G + +A++VF V+ D VS NS+I
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIE 438
Q EA +LF+++ + V++ ++ + G + + +LF M NI
Sbjct: 350 GLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 439 LTREHFTCMIDLLGRSKRFEEA-----AMLINEVTNPDVVLWRTLLNACRIHGEIEMAEK 493
+T MI + +EEA ML EV P+ + ++L+A ++ +
Sbjct: 406 -----WTAMISAFVSNGYYEEALCWFHKMLQKEVC-PNSYTFSSVLSATASLADLIEGLQ 459
Query: 494 IMRKVLQL-APGDGGTHILLTNLYASAGKWNQVIEMKTTIRD 534
I +V+++ D L ++Y G N ++ + I +
Sbjct: 460 IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE 501
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
+SS+++ A L +H V+ L + + L+ Y KCG+ +A K+F +
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS 500
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
E +IV++N+MIS + +G K+A++L+ + G P+ TF A+ A +G V G
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 298 bits (763), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 259/472 (54%), Gaps = 36/472 (7%)
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
D FV L+ + + D + A+ VF V +V L+TA+I G+ SG + + ++ M+
Sbjct: 60 DAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMI 119
Query: 196 DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA---------------- 239
V P+ Y + S L +C D + IH ++K G S +
Sbjct: 120 HNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELV 175
Query: 240 ---------------SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGR 284
+ T ++ YS C +++++++F + V WT+ + GLV+N
Sbjct: 176 NAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKE 235
Query: 285 EEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAA 344
A+ +FREM +VS N FT +L ACS E+G +H+ ME + G A
Sbjct: 236 MNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNA 295
Query: 345 LINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPN 404
LIN+Y +CG++++AR VF V+ + D++S N+MI A +G EA+ F+ + G PN
Sbjct: 296 LINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPN 355
Query: 405 GVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLI 464
VT +++L AC++ GL++ G ++F MK N+E EH+ C++DLLGR R EEA I
Sbjct: 356 QVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFI 415
Query: 465 NEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWN 523
+ PD ++ TLL+AC+IHG +E+ EKI +++ + D GT++LL+NLYAS+GKW
Sbjct: 416 ENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWK 475
Query: 524 QVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHEL 575
+ E++ ++RD ++K P S ++VD ++H F+ GD++HP I+ L EL
Sbjct: 476 ESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 208/428 (48%), Gaps = 45/428 (10%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
+LI+ K++ + ++HA +I + + +LI SV A +F +
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
++ + +MI VS G+S V LY M+ VLPD Y +++ KA ++ R H
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIH 146
Query: 125 --------GLAVVLGLEVLDVFVASA-LVDMYAKFDKMRD-------------------- 155
G + +GL++++++ S LV+ FD+M D
Sbjct: 147 AQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIK 206
Query: 156 -AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCG 214
A +F V KD V +TA+I G ++ +ALE+FREM V NE+T L++C
Sbjct: 207 EALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACS 266
Query: 215 NLGDSVNGQLIHGFIVKSGLE--SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
+LG G+ +H F+ +E +FV + +L+ MYSRC + ++ +VF + +++
Sbjct: 267 DLGALELGRWVHSFVENQRMELSNFVGN--ALINMYSRCGDINEARRVFRVMRDKDVISY 324
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG-EQIHAITT 331
+ + GL +G A++ FR+M+ PN TL ++L ACS + ++G E +++
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 332 KLGMEGNKDAGAALINLYGKCGNVDKA-RSVFDVLTELDLVSVNSMIYAYAQNGFGYEAL 390
+E + +++L G+ G +++A R + ++ E D + + +++ A +G +
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHG----NM 440
Query: 391 QLFKRIKK 398
+L ++I K
Sbjct: 441 ELGEKIAK 448
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 172/381 (45%), Gaps = 71/381 (18%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPER- 64
+IT L R +HA V+ GF S +G K+++ Y K G + A+K+FDEMP+R
Sbjct: 129 VITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRD 188
Query: 65 HI------------------------------VTWNSMISAHVSHGKSKQAVELYGNMLV 94
H+ V W +MI V + + +A+EL+ M +
Sbjct: 189 HVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQM 248
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMR 154
E V + +T + A S+LG + GR H +E L FV +AL++MY++ +
Sbjct: 249 ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRME-LSNFVGNALINMYSRCGDIN 307
Query: 155 DAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCG 214
+A VF + +KDV+ + +I+G A G EA+ FR+MV+R +PN+ TL + L +C
Sbjct: 308 EARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS 367
Query: 215 NLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTS 274
HG ++ GLE F + + +VFN H
Sbjct: 368 -----------HGGLLDIGLEVFNSMK-----------------RVFNVEPQIEHYGCIV 399
Query: 275 FVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG 334
++G V GR E A +R + + P+ L ++L AC E+GE+ I +L
Sbjct: 400 DLLGRV--GRLEEA---YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEK---IAKRLF 451
Query: 335 MEGNKDAGAALI--NLYGKCG 353
N D+G ++ NLY G
Sbjct: 452 ESENPDSGTYVLLSNLYASSG 472
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 283/517 (54%), Gaps = 17/517 (3%)
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRR------VKPNEYTLASTLASCGNLGDSVNGQL 224
+ A+I G+A S A +R M+ + + + T + TL +C S
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGR 284
+H I + GL + T+LL YS+ + + K+F+++ +W + + GLV R
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 285 EEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLGMEGNKDAGA 343
A+ +++ M + + T+ + L ACS + GE I H + + N
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSN----- 245
Query: 344 ALINLYGKCGNVDKARSVFDVLT-ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
A I++Y KCG VDKA VF+ T + +V+ N+MI +A +G + AL++F +++ G+
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIK 305
Query: 403 PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAM 462
P+ V++++ L AC +AGLVE G +F M +E +H+ C++DLL R+ R EA
Sbjct: 306 PDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHD 364
Query: 463 LINEVTN-PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGK 521
+I ++ PD VLW++LL A I+ ++EMAE R++ ++ + G +LL+N+YA+ G+
Sbjct: 365 IICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGR 424
Query: 522 WNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKT 581
W V ++ + ++KK P S+++ +H F D SH + EI++ + E+ K +
Sbjct: 425 WKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIRE 484
Query: 582 LGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCG--RTTAIRIFKNLRVCGDC 639
GY T VL D+ EE+K ++L YHSEKLA+A+ L G + +R+ NLR+CGDC
Sbjct: 485 DGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDC 544
Query: 640 HSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
H K ++ + R+II RD RFH FK G CSC+D+W
Sbjct: 545 HVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 152/320 (47%), Gaps = 10/320 (3%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
+ CA + + +H + G S LL L+D Y K G + A KLFDEMP R +
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
+WN++I+ VS ++ +A+ELY M EG+ T A A S LG V+ G
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN---- 231
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVL-EKDVVLFTALIAGYAQSGLDG 185
+ G +V V++A +DMY+K + A+ VF++ +K VV + +I G+A G
Sbjct: 232 -IFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAH 290
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
ALE+F ++ D +KP++ + + L +C + G G + + G+E + ++
Sbjct: 291 RALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVV 350
Query: 246 TMYSRCSMVEDSVKVFNQLAY-ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN- 303
+ SR + ++ + ++ V W S + E+A RE+ V+ +
Sbjct: 351 DLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDG 410
Query: 304 PFTLSSILQACSSRAMREVG 323
F L S + A R ++VG
Sbjct: 411 DFVLLSNVYAAQGR-WKDVG 429
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 297/546 (54%), Gaps = 34/546 (6%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y LI + R +HAH+++SG + + KL+ Y++CG V +ARK+FDEMP
Sbjct: 19 YVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP 78
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+R I MI A +G +++++ + M +G+ DA+ ++ KA L +G+
Sbjct: 79 KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKM 138
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H L + E D F+ S+L+DMY+KF ++ +A VF + E+D+V+F A+I+GYA +
Sbjct: 139 IHCLVLKFSYES-DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
EAL + ++M +KP+ T + LI GF E +
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNA---------------LISGFSHMRNEEKV----S 238
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+L + M D K V+WTS + GLV N + E A F++M+ + P
Sbjct: 239 EILEL-----MCLDGYK-------PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYP 286
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
N T+ ++L AC++ A + G++IH + G+E + +AL+++YGKCG + +A +F
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+ V+ NSMI+ YA +G +A++LF +++ G + +TF +IL AC++AGL +
Sbjct: 347 RKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNA 481
G LF M+N + I EH+ CM+DLLGR+ + EA +I + PD+ +W LL A
Sbjct: 407 LGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAA 466
Query: 482 CRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSP 541
CR HG +E+A + + +L P + G +LLT+LYA+AG W V+ MK I+ + ++
Sbjct: 467 CRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFL 526
Query: 542 ARSWVD 547
SWV+
Sbjct: 527 GSSWVE 532
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 319/578 (55%), Gaps = 18/578 (3%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
+ +CA+ L ++ +HA +I L + KLI C A ++F+++ E ++
Sbjct: 26 LPKCAN---LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
NS+I AH + + QA ++ M G+ D +T+ + KA S + + H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKM--RDAHLVFDRVLEKDVVLFTALIAGYAQSGLD 184
LGL D++V +AL+D Y++ + RDA +F+++ E+D V + +++ G ++G
Sbjct: 143 IEKLGLSS-DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSL 244
+A +F EM R + + T+ A C + + + + E S +++
Sbjct: 202 RDARRLFDEMPQRDLI-SWNTMLDGYARCREMSKAFE-------LFEKMPERNTVSWSTM 253
Query: 245 LTMYSRCSMVEDSVKVFNQLAYASH--VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
+ YS+ +E + +F+++ + VTWT + G + G + A + +M+ +
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+ + SIL AC+ + +G +IH+I + + N AL+++Y KCGN+ KA VF
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+ + + DLVS N+M++ +G G EA++LF R+++ G+ P+ VTFI++L +CN+AGL++
Sbjct: 374 NDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLID 433
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNA 481
EG F M+ +++ EH+ C++DLLGR R +EA ++ + P+VV+W LL A
Sbjct: 434 EGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
Query: 482 CRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSP 541
CR+H E+++A++++ +++L P D G + LL+N+YA+A W V ++++ ++ + ++K
Sbjct: 494 CRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPS 553
Query: 542 ARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKA 579
S V+++ +H F D SHP++ +I+ ML LIE
Sbjct: 554 GASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIEPP 591
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 171/580 (29%), Positives = 313/580 (53%), Gaps = 17/580 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
YS+ ++ C ++ + + V+ +G S ++G+ I Y + GS AR++FDEM
Sbjct: 177 YSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS 236
Query: 63 ERHIVTWNSMISAHVSHGK-SKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
+ +++WNS++S G +AV ++ +M+ EGV D +F+++ ++ R
Sbjct: 237 FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLAR 296
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ HGL + G E L + V + L+ Y+K + VF ++ E++VV +T +I S
Sbjct: 297 QIHGLCIKRGYESL-LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----S 350
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
+A+ +F M V PNE T + + G IHG +K+G S +
Sbjct: 351 SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVG 410
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
S +T+Y++ +ED+ K F + + ++W + + G QNG A+ +F
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETM 469
Query: 302 PNPFTLSSILQACSSRAMREV--GEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
PN +T S+L A + V G++ HA KLG+ +AL+++Y K GN+D++
Sbjct: 470 PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESE 529
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
VF+ +++ + S+I AY+ +G + LF ++ K +AP+ VTF+S+L ACN G
Sbjct: 530 KVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKG 589
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTL 478
+V++G ++F M +N+E + EH++CM+D+LGR+ R +EA L++EV P + +++
Sbjct: 590 MVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSM 649
Query: 479 LNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLK 538
L +CR+HG ++M K+ +++ P G+++ + N+YA +W++ E++ +R +
Sbjct: 650 LGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVS 709
Query: 539 KSPARSWVDV-DRE----VHTFMAGDMSHPRAHEIFDMLH 573
K SW+DV D E + F +GD SHP++ EI+ M+
Sbjct: 710 KEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVE 749
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 250/493 (50%), Gaps = 29/493 (5%)
Query: 23 VHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
+H +SGF S+ + + ++ Y K G A +F+ + + +V+WN+++S
Sbjct: 98 IHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG---FDD 154
Query: 82 SKQAVELYGNMLVEGVLPDAYTFSAI--FKAFSELGLVRYGRRAHGLAVVLGLEVLDVFV 139
++ A+ M GV+ DA+T+S F SE L+ G + V GLE D+ V
Sbjct: 155 NQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL--GLQLQSTVVKTGLES-DLVV 211
Query: 140 ASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG-EALEVFREMVDRR 198
++ + MY++ R A VFD + KD++ + +L++G +Q G G EA+ +FR+M+
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG 271
Query: 199 VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSV 258
V+ + + S + +C + D + IHG +K G ES + L++ YS+C ++E
Sbjct: 272 VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK 331
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
VF+Q++ + V+WT+ + + ++ AVS+F M V PN T ++ A
Sbjct: 332 SVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 386
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
+ G +IH + K G G + I LY K ++ A+ F+ +T +++S N+MI
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 446
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG--LVEEGCQLFAFMKNNHN 436
+AQNGF +EAL++F + PN TF S+L A A V++G + A H
Sbjct: 447 GFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHA-----HL 500
Query: 437 IELTREH----FTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAE 492
++L + ++D+ + +E+ + NE++ + +W ++++A HG+ E
Sbjct: 501 LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVM 560
Query: 493 KIMRKVLQ--LAP 503
+ K+++ +AP
Sbjct: 561 NLFHKMIKENVAP 573
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 212/439 (48%), Gaps = 19/439 (4%)
Query: 54 ARKLFDEMPERHIVT-WNSMISAHVSHGKSKQAVELYGNMLVEGVLP---DAYTFSAIFK 109
A KLFD +R+ T N IS + +A+ ++ L G D T K
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 110 AFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVV 169
A G ++ G + HG + G V V++A++ MY K + +A +F+ +++ DVV
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSF-VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 170 LFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFI 229
+ +++G+ + + AL M V + +T ++ L+ C + G + +
Sbjct: 144 SWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 230 VKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEV-A 288
VK+GLES + S +TMYSR + +VF+++++ ++W S + GL Q G A
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 289 VSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
V +FR+M+R V + + +S++ C ++ QIH + K G E + G L++
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 349 YGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTF 408
Y KCG ++ +SVF ++E ++VS +MI + +A+ +F ++ G+ PN VTF
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTF 375
Query: 409 ISILLACNNAGLVEEGCQLFAF-MKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV 467
+ ++ A ++EG ++ +K E + + I L + + E+A ++
Sbjct: 376 VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDI 433
Query: 468 TNPDVVLWRTLLNACRIHG 486
T +++ W +++ +G
Sbjct: 434 TFREIISWNAMISGFAQNG 452
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 295/548 (53%), Gaps = 42/548 (7%)
Query: 66 IVTWNSMISAHVSHGKS-KQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
++ +N M+ + ++ GKS + + L+G + +G+ PD +T + K+ L V G + H
Sbjct: 11 LLMYNKMLKS-LADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLD 184
G AV GLE D +V+++L+ MYA K+ H VFD + ++DVV + LI+ Y +G
Sbjct: 70 GYAVKAGLE-FDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 185 GEALEVFREMV-DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
+A+ VF+ M + +K +E T+ STL++C L + G+ I+ F+V + E V +
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNA 187
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFR---------- 293
L+ M+ +C ++ + VF+ + + WTS V G V GR + A +F
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 294 -----------------EMIRC----SVSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
E+ RC + P+ F L S+L C+ E G+ IH +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 333 LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQL 392
+ +K G AL+++Y KCG ++ A VF + E D S S+IY A NG AL L
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 367
Query: 393 FKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLG 452
+ ++ +G+ + +TF+++L ACN+ G V EG ++F M HN++ EH +C+IDLL
Sbjct: 368 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 427
Query: 453 RSKRFEEAAMLINEVTNPD----VVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGT 508
R+ +EA LI+++ V ++ +LL+A R +G +++AE++ K+ ++ D
Sbjct: 428 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 487
Query: 509 HILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGD--MSHPRAH 566
H LL ++YASA +W V ++ ++DL ++K P S +++D H F+ GD +SHP+
Sbjct: 488 HTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMD 547
Query: 567 EIFDMLHE 574
EI MLH+
Sbjct: 548 EINSMLHQ 555
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 205/411 (49%), Gaps = 42/411 (10%)
Query: 23 VHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
VH + + +G + + + L+ Y G + K+FDEMP+R +V+WN +IS++V +G+
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGR 127
Query: 82 SKQAVELYGNMLVEGVLP-DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVA 140
+ A+ ++ M E L D T + A S L + G R + VV E + V +
Sbjct: 128 FEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRF-VVTEFE-MSVRIG 185
Query: 141 SALVDMYAK----------FDKMRD---------------------AHLVFDRVLEKDVV 169
+ALVDM+ K FD MRD A ++F+R KDVV
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 170 LFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFI 229
L+TA++ GY Q EALE+FR M ++P+ + L S L C G G+ IHG+I
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 230 VKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAV 289
++ + T+L+ MY++C +E +++VF ++ +WTS + GL NG A+
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 290 SVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLGMEGNKDAGAALINL 348
++ EM V + T ++L AC+ G +I H++T + ++ + + LI+L
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 349 YGKCGNVDKARSVFDVL---TELDLVSVNSMIYAYAQNGFGYEALQLFKRI 396
+ G +D+A + D + ++ LV V + + A+N Y +++ +R+
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARN---YGNVKIAERV 473
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
SL+T CA T +L + +H ++ + + ++G L+D Y KCG + A ++F E+ ER
Sbjct: 284 SLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER 343
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+W S+I +G S +A++LY M GV DA TF A+ A + G V GR+
Sbjct: 344 DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 173/564 (30%), Positives = 299/564 (53%), Gaps = 20/564 (3%)
Query: 23 VHAHVISSGFSYCLLGHKLIDGYIKC----GSVAEARKLFDEMPERHIVTWNSMISAHVS 78
+H +VI SGF G + I C ARKLFDEM ER +++W+ +I ++V
Sbjct: 147 IHGYVIRSGF----CGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 79 HGKSKQAVELYGNMLVEG-VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDV 137
+ ++L+ M+ E PD T +++ KA + + + GR HG ++ G ++ DV
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV 262
Query: 138 FVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR 197
FV ++L+DMY+K + A VFD +++V + +++AG+ + EALE+F MV
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 198 RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDS 257
V+ +E T+ S L C + + IHG I++ G ES + +SL+ Y+ CS+V+D+
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 258 VKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSR 317
V + + Y V+ ++ + GL GR + A+S+F M +PN T+ S+L ACS
Sbjct: 383 GTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVS 439
Query: 318 AMREVGEQIHAITTKLGMEGNK-DAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSM 376
A + H I + + N G ++++ Y KCG ++ AR FD +TE +++S +
Sbjct: 440 ADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVI 499
Query: 377 IYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM-KNNH 435
I AYA NG +AL LF +K+ G PN VT+++ L ACN+ GLV++G +F M + +H
Sbjct: 500 ISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH 559
Query: 436 NIELTREHFTCMIDLLGRSKRFEEAAMLIN---EVTNPDVVLWRTLLNACRIH-GEIEMA 491
L +H++C++D+L R+ + A LI E W +L+ CR ++ +
Sbjct: 560 KPSL--QHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIIT 617
Query: 492 EKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDRE 551
+++ +VL+L P ++L ++ +A+ W V M+ +++ K++ S V
Sbjct: 618 SEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNL 677
Query: 552 VHTFMAGDMSHPRAHEIFDMLHEL 575
F+AGD E+ D++ L
Sbjct: 678 AKRFLAGDKLSQSDSELNDVVQSL 701
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 231/464 (49%), Gaps = 23/464 (4%)
Query: 32 FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGN 91
S+ G+ + D Y+KCG + + FD M R V+WN ++ + +G ++ + +
Sbjct: 58 LSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK 117
Query: 92 MLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFD 151
+ V G P+ T + A L G + HG + G + V ++++ MYA D
Sbjct: 118 LRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISS-VQNSILCMYADSD 174
Query: 152 KMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV-DRRVKPNEYTLASTL 210
+ A +FD + E+DV+ ++ +I Y QS L++F+EMV + + +P+ T+ S L
Sbjct: 175 SL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLE-SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH 269
+C + D G+ +HGF ++ G + + V SL+ MYS+ V+ + +VF++ +
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 293
Query: 270 VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAI 329
V+W S + G V N R + A+ +F M++ +V + T+ S+L+ C + IH +
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV 353
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA 389
+ G E N+ A ++LI+ Y C VD A +V D +T D+VS ++MI A G EA
Sbjct: 354 IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEA 413
Query: 390 LQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF----- 444
+ +F ++ PN +T IS+L AC+ + + K H I + R
Sbjct: 414 ISIFCHMRD---TPNAITVISLLNACSVSADLRTS-------KWAHGIAIRRSLAINDIS 463
Query: 445 --TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHG 486
T ++D + E A +++T +++ W +++A I+G
Sbjct: 464 VGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAING 507
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 127/337 (37%), Gaps = 74/337 (21%)
Query: 282 NGREEVAVSVFREMIRCSVSPN-PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
+G+ VS + E+ R V N PF + +AC+ + +GN
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL--------------FQGN-- 65
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
++ + Y KCG++ FD + D VS N +++ GF E L F +++ G
Sbjct: 66 ---SIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMI---DLLGRSKRF 457
PN T + ++ AC + E + I + CM D L K F
Sbjct: 123 FEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLF 182
Query: 458 EEAA-----------------------------MLINEVTNPDVVLWRTLLNACRIHGEI 488
+E + M+ T PD V ++L AC + +I
Sbjct: 183 DEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDI 242
Query: 489 EMAEKI----MRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEM--KTTIRDLKLKKSPA 542
++ + +R+ LA D L ++Y+ + + +TT R++
Sbjct: 243 DVGRSVHGFSIRRGFDLA--DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIV------ 294
Query: 543 RSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKA 579
SW ++ +AG + + R E +M H ++++A
Sbjct: 295 -SW-------NSILAGFVHNQRYDEALEMFHLMVQEA 323
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/655 (27%), Positives = 316/655 (48%), Gaps = 81/655 (12%)
Query: 21 RAVHAHVISSGFSY--CLLGHKLIDGYIKCGSVAEARKLFDEMPE---RHIVTWNSMISA 75
R VHA V+ S F + L LI Y + G + +AR +F+ + + WNS++ A
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 76 HVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL 135
+VSHG + A+ELY M G+ D Y I +A LG R H + +GL+
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKE- 191
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
++ V + L+ +Y K +M DA+ +F + ++ + + +I G++Q A+++F M
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 196 DRRVKPNEYTLASTLA---SCGNL-------------GDSVNGQL--------------- 224
KP+E T S L+ CG G++V+G+
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALS 311
Query: 225 ----IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL---------------- 264
+HG+++K G E ++ S+ +L+ +Y + V+D+ +F Q+
Sbjct: 312 IAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFV 371
Query: 265 -----------------------AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
A+ VTWTS + G GR + ++ FR+M V
Sbjct: 372 DAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL 431
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
N T+ IL C+ +G +IH + M N AL+N+Y KCG + + V
Sbjct: 432 ANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLV 491
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
F+ + + DL+S NS+I Y +GF +AL +F R+ G P+G+ +++L AC++AGLV
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLI-NEVTNPDVVLWRTLLN 480
E+G ++F M +E +EH+ C++DLLGR +EA+ ++ N P V + LLN
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLN 611
Query: 481 ACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKS 540
+CR+H +++AE I ++ L P G+++LL+N+Y++ G+W + ++ + LKK
Sbjct: 612 SCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKV 671
Query: 541 PARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDL 595
SW++V ++ + F +G + I+ +L +L+ G + D DL
Sbjct: 672 SGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDL 726
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 42/301 (13%)
Query: 11 CAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTW 69
CA ++L+ VH +VI GF Y + LI Y K G V +A LF ++ + I +W
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
Query: 70 NSMISAHVSHGKSKQAVELYGNM------------------LVEG--------------- 96
NS+I++ V GK +A+ L+ + +++G
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 97 ------VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKF 150
VL ++ T I +EL + GR HG + + ++ V +ALV+MYAK
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE-NILVQNALVNMYAKC 482
Query: 151 DKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
+ + LVF+ + +KD++ + ++I GY G +AL +F M+ P+ L + L
Sbjct: 483 GLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVL 542
Query: 211 ASCGNLGDSVNG-QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH 269
++C + G G ++ + + GLE ++ + R ++++ ++ +
Sbjct: 543 SACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPK 602
Query: 270 V 270
V
Sbjct: 603 V 603
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
+++ CA +L R +H HVI + S L+ + L++ Y KCG ++E +F+ + ++
Sbjct: 440 ILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKD 499
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA-H 124
+++WNS+I + HG +++A+ ++ M+ G PD A+ A S GLV GR +
Sbjct: 500 LISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFY 559
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDA-HLVFDRVLEKDVVLFTALI 175
++ GLE A +VD+ + +++A +V + +E V + AL+
Sbjct: 560 SMSKRFGLEPQQEHYA-CIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALL 610
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 298/577 (51%), Gaps = 37/577 (6%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
S+ ++ A+ + + HA I +G +LG L++ Y K G + A +FD M E
Sbjct: 278 STCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE 337
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
+ +VTWN +IS +V G + A+ + M +E + D T + + A + ++ G+
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV 397
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
+ E D+ +AS ++DMYAK + DA VFD +EKD++L+ L+A YA+SGL
Sbjct: 398 QCYCIRHSFES-DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
GEAL +F M V PN T + S NGQ V + F+ Q+S
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLR-----NGQ------VDEAKDMFLQMQSS 505
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
+ + ++WT+ + G+VQNG E A+ R+M + PN
Sbjct: 506 GII--------------------PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Query: 304 PFTLSSILQACSSRAMREVGEQIHA-ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
F+++ L AC+ A +G IH I L +L+++Y KCG+++KA VF
Sbjct: 546 AFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF 605
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+L N+MI AYA G EA+ L++ ++ +GL P+ +T ++L ACN+AG +
Sbjct: 606 GSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDIN 665
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNA 481
+ ++F + + +++ EH+ M+DLL + E+A LI E+ PD + ++L+ +
Sbjct: 666 QAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVAS 725
Query: 482 CRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSP 541
C + E+ + + RK+L+ P + G ++ ++N YA G W++V++M+ ++ LKK P
Sbjct: 726 CNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKP 785
Query: 542 ARSWVDVDRE--VHTFMAGDMSHPRAHEIFDMLHELI 576
SW+ + E VH F+A D +H R +EI ML L+
Sbjct: 786 GCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLL 822
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 255/487 (52%), Gaps = 9/487 (1%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVISSGFSYC---LLGHKLIDGYIKCGSVAEARKLFD 59
Y ++ C + + L+T + +HA ++ +G Y + KL+ Y KC ++ A LF
Sbjct: 72 IYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFS 131
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
++ R++ +W ++I G + A+ + ML + PD + + KA L R+
Sbjct: 132 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRF 191
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
GR HG V GLE VFVAS+L DMY K + DA VFD + +++ V + AL+ GY
Sbjct: 192 GRGVHGYVVKSGLEDC-VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
Q+G + EA+ +F +M + V+P T+++ L++ N+G G+ H + +G+E
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
TSLL Y + ++E + VF+++ VTW + G VQ G E A+ + + M
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
+ + TL++++ A + ++G+++ + E + + ++++Y KCG++ A+
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
VFD E DL+ N+++ AYA++G EAL+LF ++ G+ PN +T+ I+L+ G
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN----PDVVLW 475
V+E +F M+++ I +T M++ + ++ EEA + + ++ P+
Sbjct: 491 QVDEAKDMFLQMQSSGIIP-NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 476 RTLLNAC 482
L+AC
Sbjct: 550 TVALSAC 556
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 156/321 (48%), Gaps = 7/321 (2%)
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL 234
++ ++G EAL + EM R ++ L C D G+ IH I+K+G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG- 100
Query: 235 ESFVAS----QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVS 290
F A +T L+ Y++C +E + +F++L + +W + + + G E A+
Sbjct: 101 -DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALM 159
Query: 291 VFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYG 350
F EM+ + P+ F + ++ +AC + G +H K G+E ++L ++YG
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219
Query: 351 KCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFIS 410
KCG +D A VFD + + + V+ N+++ Y QNG EA++LF ++K G+ P VT +
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 411 ILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNP 470
L A N G VEEG Q A N +EL T +++ + E A M+ + +
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVN-GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 471 DVVLWRTLLNACRIHGEIEMA 491
DVV W +++ G +E A
Sbjct: 339 DVVTWNLIISGYVQQGLVEDA 359
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 277/512 (54%), Gaps = 7/512 (1%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL 98
+ LI GY K G + EA LF MP+ ++V+WN +IS V G S +A+E M EG++
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLV 235
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
D + KA S GL+ G++ H V GLE F SAL+DMY+ + A
Sbjct: 236 LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLES-SPFAISALIDMYSNCGSLIYAAD 294
Query: 159 VFDR---VLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
VF + + V ++ ++++G+ + + AL + ++ + + YTL+ L C N
Sbjct: 295 VFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICIN 354
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
+ G +H +V SG E + L+ +++ ++D+ K+F++L + ++
Sbjct: 355 YVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGL 414
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
+ G V++G +A +FRE+I+ + + F +S+IL+ CSS A G+QIH + K G
Sbjct: 415 IRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGY 474
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKR 395
E AL+++Y KCG +D +FD + E D+VS +I + QNG EA + F +
Sbjct: 475 ESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHK 534
Query: 396 IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSK 455
+ +G+ PN VTF+ +L AC ++GL+EE MK+ + +E EH+ C++DLLG++
Sbjct: 535 MINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAG 594
Query: 456 RFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTN 514
F+EA LIN++ PD +W +LL AC H + I K+L+ P D + L+N
Sbjct: 595 LFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSN 654
Query: 515 LYASAGKWNQVIEMKTTIRDLKLKKSPARSWV 546
YA+ G W+Q+ +++ + L K+S SW+
Sbjct: 655 AYATLGMWDQLSKVREAAKKLGAKES-GMSWI 685
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/538 (26%), Positives = 255/538 (47%), Gaps = 53/538 (9%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
+ C ++ ++ AHVI G S + + +I Y+ +++A K+FDEM ER+I
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNML-VEGVLPDAYTFSAIFKAFS-----ELGLVRYG 120
VTW +M+S + S GK +A+ELY ML E + + +SA+ KA +LG++ Y
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 121 RRAHGLAVVLGLEVL--DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
R +G E L DV + +++VDMY K ++ +A+ F +L + LI+GY
Sbjct: 132 R--------IGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 179 AQSGLDGEALEVFREMVDRRV--------------KP----------------NEYTLAS 208
++GL EA+ +F M V P + + L
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPC 243
Query: 209 TLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQ--LAY 266
L +C G G+ +H +VKSGLES + ++L+ MYS C + + VF+Q LA
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 267 ASHV-TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQ 325
S V W S + G + N E A+ + ++ + + + +TLS L+ C + +G Q
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGF 385
+H++ G E + G+ L++L+ GN+ A +F L D+++ + +I ++GF
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF-MKNNHNIELTREHF 444
A LF+ + KLGL + +IL C++ + G Q+ +K + E
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA-- 481
Query: 445 TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA 502
T ++D+ + + +L + + DVV W ++ +G +E A + K++ +
Sbjct: 482 TALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG 539
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 148/329 (44%), Gaps = 35/329 (10%)
Query: 206 LASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA 265
+A+ L CG + G+ I ++K G+ V ++++MY ++ D+ KVF++++
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 266 YASHVTWTSFVVGLVQNGREEVAVSVFREMIRC-SVSPNPFTLSSILQACSSRAMREVGE 324
+ VTWT+ V G +G+ A+ ++R M+ + N F S++L+AC ++G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 325 QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNG 384
++ K + G+ +++++Y K G + +A S F + S N++I Y + G
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 385 FGYEALQLFK------------------------------RIKKLGLAPNGVTFISILLA 414
EA+ LF R+++ GL +G L A
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 415 CNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINE---VTNPD 471
C+ GL+ G QL + + +E + + +ID+ AA + ++ N
Sbjct: 248 CSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 472 VVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
V +W ++L+ I+ E E A ++ ++ Q
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQ 335
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/609 (28%), Positives = 301/609 (49%), Gaps = 48/609 (7%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEAR------KLFD 59
SL+ +C K L L+ + A +I +G +L I +++E+R K+
Sbjct: 58 SLLEKC---KLLLHLKQIQAQMIINGL---ILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL---PDAYTFSAIFKAFSELGL 116
+ +I +WN I K++ LY ML G PD +T+ +FK ++L L
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 117 VRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIA 176
G G + L LE++ V +A + M+A M +A VFD +D+V + LI
Sbjct: 172 SSLGHMILGHVLKLRLELVS-HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLIN 230
Query: 177 GYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES 236
GY + G +A+ V++ M VKP++ T+ ++SC LGD G+ + ++ ++GL
Sbjct: 231 GYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRM 290
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL----------------- 279
+ +L+ M+S+C + ++ ++F+ L + V+WT+ + G
Sbjct: 291 TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME 350
Query: 280 --------------VQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQ 325
VQ R + A+++F+EM + P+ T+ L ACS +VG
Sbjct: 351 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW 410
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGF 385
IH K + N G +L+++Y KCGN+ +A SVF + + ++ ++I A +G
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 470
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT 445
A+ F + G+AP+ +TFI +L AC + G+++ G F+ MK+ N+ +H++
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 530
Query: 446 CMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG 504
M+DLLGR+ EEA L+ + D +W LL CR+HG +E+ EK +K+L+L P
Sbjct: 531 IMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS 590
Query: 505 DGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPR 564
D G ++LL +Y A W + + + ++K P S ++V+ V F+ D S P
Sbjct: 591 DSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPE 650
Query: 565 AHEIFDMLH 573
+ +I+D LH
Sbjct: 651 SEKIYDRLH 659
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 289/557 (51%), Gaps = 43/557 (7%)
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
P ++ +N+MISA VS K+ + LY +M+ V PD TF + KA S L V+
Sbjct: 96 PNPNVFVYNTMISA-VSSSKN-ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK--- 150
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ H +V G L ++ ++LV Y + A VF R+ DV F +I GYA+
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG--LESFVA 239
G EAL+++ +MV ++P+EYT+ S L CG+L D G+ +HG+I + G S +
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI-RC 298
+LL MY +C + + F+ + +W + VVG V+ G E A +VF +M R
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 299 SVSPNPFTLSSILQACSSRAMREV--------------------------------GEQI 326
VS N + C R +RE+ G +
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 327 HAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFG 386
H + +L ++G+ +ALI++Y KCG +++A VF TE D+ SMI A +G G
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNG 450
Query: 387 YEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTC 446
+ALQLF R+++ G+ PN VT +++L AC+++GLVEEG +F MK+ + EH+
Sbjct: 451 QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGS 510
Query: 447 MIDLLGRSKRFEEAAMLINE--VTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG 504
++DLL R+ R EEA ++ + P +W ++L+ACR +IE AE + ++L+L P
Sbjct: 511 LVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPE 570
Query: 505 DGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGD-MSHP 563
G ++LL+N+YA+ G+W + + + + +KK+ S V +H F+A + +HP
Sbjct: 571 KEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHP 630
Query: 564 RAHEIFDMLHELIEKAK 580
R EI +L L + K
Sbjct: 631 RWTEIKRILQHLYNEMK 647
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 194/385 (50%), Gaps = 43/385 (11%)
Query: 17 LTTLRAVHAHVISSGFSYCL-----LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNS 71
L+ ++ +H H+I SG CL L + L+ Y++ G+ A K+F MP + ++N
Sbjct: 146 LSEVKQIHCHIIVSG---CLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNV 202
Query: 72 MISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLG 131
MI + G S +A++LY M+ +G+ PD YT ++ L +R G+ HG G
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRG 262
Query: 132 -LEVLDVFVASALVDMYAK----------FDKMRD---------------------AHLV 159
+ ++ +++AL+DMY K FD M+ A V
Sbjct: 263 PVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAV 322
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEAL-EVFREM-VDRRVKPNEYTLASTLASCGNLG 217
FD++ ++D+V + +L+ GY++ G D + E+F EM + +VKP+ T+ S ++ N G
Sbjct: 323 FDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNG 382
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVV 277
+ +G+ +HG +++ L+ ++L+ MY +C ++E + VF WTS +
Sbjct: 383 ELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMIT 442
Query: 278 GLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLGME 336
GL +G + A+ +F M V+PN TL ++L ACS + E G + + + K G +
Sbjct: 443 GLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFD 502
Query: 337 GNKDAGAALINLYGKCGNVDKARSV 361
+ +L++L + G V++A+ +
Sbjct: 503 PETEHYGSLVDLLCRAGRVEEAKDI 527
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
SLI+ A+ L+ R VH VI L LID Y KCG + A +F E+
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ W SMI+ HG +QA++L+G M EGV P+ T A+ A S GLV G
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/539 (28%), Positives = 298/539 (55%), Gaps = 6/539 (1%)
Query: 11 CAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTW 69
C++ +L R +H + +G S + + Y K G+ +EA F E+ + + +W
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSW 299
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVV 129
S+I++ G +++ +++ M +G+ PD S + ++ LV G+ HG V+
Sbjct: 300 TSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF-VI 358
Query: 130 LGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK-DVVLFTALIAGYAQSGLDGEAL 188
LD V ++L+ MY KF+ + A +F R+ E+ + + ++ GY + + +
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCI 418
Query: 189 EVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMY 248
E+FR++ + ++ + + S ++SC ++G + G+ +H ++VK+ L+ ++ SL+ +Y
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478
Query: 249 SRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLS 308
+ + + ++F + A + +TW + + V + E A+++F M+ + P+ TL
Sbjct: 479 GKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLV 537
Query: 309 SILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL 368
++L AC + E G+ IH T+ E N AALI++Y KCG+++K+R +FD +
Sbjct: 538 TLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Query: 369 DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLF 428
D V N MI Y +G A+ LF ++++ + P G TF+++L AC +AGLVE+G +LF
Sbjct: 598 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF 657
Query: 429 AFMKNNHNIELTREHFTCMIDLLGRSKRFEEA-AMLINEVTNPDVVLWRTLLNACRIHGE 487
M + ++++ +H++C++DLL RS EEA + +++ +PD V+W TLL++C HGE
Sbjct: 658 LKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Query: 488 IEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWV 546
EM ++ + + P + G +I+L N+Y++AGKW + + +R+ + K S V
Sbjct: 717 FEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 236/485 (48%), Gaps = 14/485 (2%)
Query: 11 CAHTKSLTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTW 69
C + SL +LR +A +I+ G S + KLI Y G + ++F + R I W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVV 129
NS+I AH S+G +++ + +ML+ G PD +T + A +EL G HGL +
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 130 LGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALE 189
G + V ++ V Y+K ++DA LVFD + ++DVV +TA+I+G+ Q+G L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 190 VFREM------VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
+M VD KPN TL +C NLG G+ +HGF VK+GL S Q+S
Sbjct: 214 YLCKMHSAGSDVD---KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSS 270
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
+ + YS+ ++ F +L +WTS + L ++G E + +F EM + P+
Sbjct: 271 MFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPD 330
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
+S ++ + G+ H + + +L+++Y K + A +F
Sbjct: 331 GVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFC 390
Query: 364 VLTEL-DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
++E + + N+M+ Y + + ++LF++I+ LG+ + + S++ +C++ G V
Sbjct: 391 RISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVL 450
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNAC 482
G L ++ +++LT +IDL G+ A + E + +V+ W ++ A
Sbjct: 451 LGKSLHCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMI-AS 507
Query: 483 RIHGE 487
+H E
Sbjct: 508 YVHCE 512
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 268 bits (686), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 156/584 (26%), Positives = 302/584 (51%), Gaps = 43/584 (7%)
Query: 36 LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNML-- 93
L KLI Y + +A +FDE+ R+ ++N+++ A+ S A L+ + +
Sbjct: 58 FLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGS 117
Query: 94 ----VEGVLPDAYTFSAIFKAFS---ELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDM 146
+ PD+ + S + KA S + L R+ HG + G + DVFV + ++
Sbjct: 118 SCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDS-DVFVGNGMITY 176
Query: 147 YAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVD-RRVKPNEYT 205
Y K D + A VFD + E+DVV + ++I+GY+QSG + ++++ M+ KPN T
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Query: 206 LASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCS------------- 252
+ S +CG D + G +H ++++ ++ ++ +++ Y++C
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 253 ------------------MVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFRE 294
+V++++ +F+++ TW + + GL+QN E ++ FRE
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFRE 356
Query: 295 MIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGN 354
MIRC PN TLSS+L + + + + G++IHA + G + N ++I+ Y K G
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 355 VDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
+ A+ VFD + L++ ++I AYA +G A LF +++ LG P+ VT ++L A
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA 476
Query: 415 CNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVV 473
++G + +F M ++IE EH+ CM+ +L R+ + +A I+++ +P
Sbjct: 477 FAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAK 536
Query: 474 LWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIR 533
+W LLN + G++E+A ++ ++ P + G + ++ NLY AG+W + ++ ++
Sbjct: 537 VWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMK 596
Query: 534 DLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIE 577
+ LKK P SW++ ++ + +F+A D S R+ E+++++ L+E
Sbjct: 597 RIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVE 640
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 206/452 (45%), Gaps = 51/452 (11%)
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
D + + + F+ L + + H VV ++ D F+AS L+ Y + D+ R A V
Sbjct: 21 DGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKP-DNFLASKLISFYTRQDRFRQALHV 79
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR------VKPNEYTLASTLASC 213
FD + ++ + AL+ Y + +A +F + +P+ +++ L +
Sbjct: 80 FDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKAL 139
Query: 214 GNLGDSVNGQL---IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
D G L +HGF+++ G +S V ++T Y++C +E + KVF++++ V
Sbjct: 140 SGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVV 199
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMIRCS-VSPNPFTLSSILQACSSRAMREVGEQIHAI 329
+W S + G Q+G E +++ M+ CS PN T+ S+ QAC + G ++H
Sbjct: 200 SWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKK 259
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA 389
+ ++ + A+I Y KCG++D AR++FD ++E D V+ ++I Y +G EA
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEA 319
Query: 390 LQLFKRIKKLGLA-------------------------------PNGVTFISILLACNNA 418
+ LF ++ +GL+ PN VT S+L + +
Sbjct: 320 MALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYS 379
Query: 419 GLVEEGCQLFAFMKNN---HNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLW 475
++ G ++ AF N +NI +T T +ID + A + + + ++ W
Sbjct: 380 SNLKGGKEIHAFAIRNGADNNIYVT----TSIIDNYAKLGFLLGAQRVFDNCKDRSLIAW 435
Query: 476 RTLLNACRIHGEIEMAEKIMRKV--LQLAPGD 505
++ A +HG+ + A + ++ L P D
Sbjct: 436 TAIITAYAVHGDSDSACSLFDQMQCLGTKPDD 467
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 286/534 (53%), Gaps = 25/534 (4%)
Query: 22 AVHAHVISSGFSYCLLGH-----KLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAH 76
A+H + + G L+G L+ Y KCG + A +LF + +R +V+W++MI+++
Sbjct: 321 AIHDYAVQQG----LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASY 376
Query: 77 VSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLD 136
G+ +A+ L+ +M+ + P+A T +++ + + + R G+ H A+ +E +
Sbjct: 377 EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES-E 435
Query: 137 VFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVD 196
+ A+A++ MYAK + A F+R+ KD V F AL GY Q G +A +V++ M
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495
Query: 197 RRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED 256
V P+ T+ L +C D G ++G I+K G +S +L+ M+++C +
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAA 555
Query: 257 SVKVFNQLAY-ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS 315
++ +F++ + S V+W + G + +G+ E AV+ FR+M PN T +I++A +
Sbjct: 556 AIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 316 SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNS 375
+ VG +H+ + G G +L+++Y KCG ++ + F ++ +VS N+
Sbjct: 616 ELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNT 675
Query: 376 MIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
M+ AYA +G A+ LF +++ L P+ V+F+S+L AC +AGLVEEG ++F M H
Sbjct: 676 MLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERH 735
Query: 436 NIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKI 494
IE EH+ CM+DLLG++ F EA ++ + V +W LLN+ R+H + ++
Sbjct: 736 KIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAA 795
Query: 495 MRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDV 548
+ ++++L P L + Y+ + +V + ++KK PA SW++V
Sbjct: 796 LCQLVKLEP-------LNPSHYSQDRRLGEVNNVS------RIKKVPACSWIEV 836
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 234/472 (49%), Gaps = 11/472 (2%)
Query: 37 LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
+G L++ Y K + AR++FD+M + +VTWN+M+S +G S A+ L+ +M
Sbjct: 137 IGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCC 196
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFV-ASALVDMYAKFDKMRD 155
V D + + A S+L R HGL + G +F +S L+DMY +
Sbjct: 197 VDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF----IFAFSSGLIDMYCNCADLYA 252
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
A VF+ V KD + ++A YA +G E LE+F M + V+ N+ AS L +
Sbjct: 253 AESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAY 312
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
+GD V G IH + V+ GL V+ TSL++MYS+C +E + ++F + V+W++
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
+ Q G+ + A+S+FR+M+R + PN TL+S+LQ C+ A +G+ IH K +
Sbjct: 373 IASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI 432
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKR 395
E + A+I++Y KCG A F+ L D V+ N++ Y Q G +A ++K
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 396 IKKLGLAPNGVTFISILLACNNAGLVEEG-CQLFAFMKNNHNIELTREHFTCMIDLLGRS 454
+K G+ P+ T + +L C G C +K+ + E H +I++ +
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKC 550
Query: 455 KRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMR--KVLQLAP 503
A +L ++ V W ++N +HG+ E A R KV + P
Sbjct: 551 DALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP 602
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 226/476 (47%), Gaps = 8/476 (1%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
Y++L+ K+ L VH +I SG ++LI+ Y +R +FD + +
Sbjct: 5 YTNLLLMLRECKNFRCLLQVHGSLIVSGLK---PHNQLINAYSLFQRQDLSRVIFDSVRD 61
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVE-GVLPDAYTFSAIFKAFSELGLVRYGRR 122
+V WNSMI + G ++A+ +G M E G+ PD Y+F+ KA + + G R
Sbjct: 62 PGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLR 121
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H L +GLE DV++ +ALV+MY K + A VFD++ KDVV + +++G AQ+G
Sbjct: 122 IHDLIAEMGLES-DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
AL +F +M V + +L + + + L S + +HG ++K G A +
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSS 238
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
L+ MY C+ + + VF ++ +W + + NG E + +F M V
Sbjct: 239 GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
N +S LQA + G IH + G+ G+ +L+++Y KCG ++ A +F
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF 358
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+ + D+VS ++MI +Y Q G EA+ LF+ + ++ + PN VT S+L C
Sbjct: 359 INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR 418
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTL 478
G + + +IE E T +I + + RF A + D V + L
Sbjct: 419 LGKSIHCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNAL 473
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 185/381 (48%), Gaps = 9/381 (2%)
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ HG +V GL+ + L++ Y+ F + + ++FD V + VVL+ ++I GY ++
Sbjct: 23 QVHGSLIVSGLKP-----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 182 GLDGEALEVFREMVDRR-VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
GL EAL F M + + + P++Y+ L +C D G IH I + GLES V
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
T+L+ MY + + + +VF+++ VTW + V GL QNG A+ +F +M C V
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
+ +L +++ A S +V +H + K G +G LI++Y C ++ A S
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAAES 255
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
VF+ + D S +M+ AYA NGF E L+LF ++ + N V S L A G
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLN 480
+ +G + + I T ++ + + E A L + + DVV W ++
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVA-TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 481 ACRIHGEIEMAEKIMRKVLQL 501
+ G+ + A + R ++++
Sbjct: 375 SYEQAGQHDEAISLFRDMMRI 395
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/590 (29%), Positives = 301/590 (51%), Gaps = 74/590 (12%)
Query: 24 HAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSK 83
HA + S+ F+ ++DGY++ + +A KLFD MPER V++ ++I + + +
Sbjct: 102 HAKLDSASFNI------MVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 84 QAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASAL 143
+A+EL+ M G++ + T + + A S LG + R LA+ L LE VFV++ L
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEG-RVFVSTNL 214
Query: 144 VDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL-------------------- 183
+ MY ++DA +FD + E+++V + ++ GY+++GL
Sbjct: 215 LHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG 274
Query: 184 ---DG--------EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKS 232
DG EAL + EM+ +KP+E + L++ S G +HG IVK
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 334
Query: 233 GLESF-------------------------------VASQTSLLTMYSRCSMVEDSVKVF 261
G + + +AS+ +L+ + + MVE + +VF
Sbjct: 335 GFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVF 394
Query: 262 NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS-VSPNPFTLSSILQACSSRAMR 320
+Q +W + + G Q+ ++A+ +FREMI S V P+ T+ S+ A SS
Sbjct: 395 DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 454
Query: 321 EVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSV---NSMI 377
E G++ H + N + AA+I++Y KCG+++ A ++F + ++ N++I
Sbjct: 455 EEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAII 514
Query: 378 YAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
A +G AL L+ ++ L + PN +TF+ +L AC +AGLVE G F MK++H I
Sbjct: 515 CGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGI 574
Query: 438 ELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMR 496
E +H+ CM+DLLG++ R EEA +I ++ DV++W LL+A R HG +E+AE
Sbjct: 575 EPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAAT 634
Query: 497 KVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWV 546
++ + P GG ++L+N+YA AG+W V ++ +R ++ S A S V
Sbjct: 635 ELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 206/471 (43%), Gaps = 72/471 (15%)
Query: 87 ELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDM 146
+++ +L G+ + Y +++ +++ L+ A +V LD + +VD
Sbjct: 62 QIHCRVLKSGLDSNGYICNSVLNMYAKCRLL-----ADAESVFRDHAKLDSASFNIMVDG 116
Query: 147 YAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTL 206
Y + ++ DA +FD + E+ V +T LI GYAQ+ EA+E+FREM + + NE TL
Sbjct: 117 YVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTL 176
Query: 207 ASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY 266
A+ +++C +LG + +++ +K LE V T+LL MY C ++D+ K+F+++
Sbjct: 177 ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 267 ASHVTWTSFV-----VGLVQNGRE--------------------------EVAVSVFREM 295
+ VTW + GL++ E + A+ + EM
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 296 IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYG----- 350
+RC + P+ + +L A + G Q+H K G + A +I+ Y
Sbjct: 297 LRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 351 --------------------------KCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNG 384
K G V++AR VFD + D+ S N+MI YAQ+
Sbjct: 357 KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSL 416
Query: 385 FGYEALQLFKR-IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREH 443
AL LF+ I + P+ +T +S+ A ++ G +EEG + ++ N I
Sbjct: 417 SPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNL 475
Query: 444 FTCMIDLLGRSKRFEEAAMLINEVTN---PDVVLWRTLLNACRIHGEIEMA 491
+ID+ + E A + ++ N + W ++ HG ++A
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 271/484 (55%), Gaps = 8/484 (1%)
Query: 68 TWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLA 127
++N+++S++ K + + Y + G PD +TF +FKA + +R G++ HG+
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 128 VVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEA 187
+G D++V ++LV Y + R+A VF + +DVV +T +I G+ ++GL EA
Sbjct: 133 TKMGF-YDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 188 LEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTM 247
L+ F +M V+PN T L S G +G G+ IHG I+K + + +L+ M
Sbjct: 192 LDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 248 YSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS-VSPNPFT 306
Y +C + D+++VF +L V+W S + GLV R + A+ +F M S + P+
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 307 LSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
L+S+L AC+S + G +H G++ + G A++++Y KCG ++ A +F+ +
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 367 ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQ 426
++ + N+++ A +G G E+L+ F+ + KLG PN VTF++ L AC + GLV+EG +
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 427 LFAFMKN-NHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRI 484
F MK+ +N+ EH+ CMIDLL R+ +EA L+ + PDV + +L+AC+
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKN 488
Query: 485 HGEI-EMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPAR 543
G + E+ ++I+ L + D G ++LL+N++A+ +W+ V ++ ++ + K P
Sbjct: 489 RGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGS 548
Query: 544 SWVD 547
S+++
Sbjct: 549 SYIE 552
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 199/426 (46%), Gaps = 40/426 (9%)
Query: 1 MNFYSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFD 59
M + + C + + +H V GF + + L+ Y CG A K+F
Sbjct: 106 MFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFG 165
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
EMP R +V+W +I+ G K+A++ + M VE P+ T+ + + +G +
Sbjct: 166 EMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSL 222
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G+ HGL ++ ++ + +AL+DMY K +++ DA VF + +KD V + ++I+G
Sbjct: 223 GKGIHGL-ILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLV 281
Query: 180 QSGLDGEALEVFREM-VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
EA+++F M +KP+ + L S L++C +LG +G+ +H +I+ +G++
Sbjct: 282 HCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDT 341
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
T+++ MY++C +E ++++FN + + TW + + GL +G ++ F EM++
Sbjct: 342 HIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQ-IHAITTKLGMEGNKDAGAALINLYGKCGNVDK 357
PN T + L AC + + G + H + ++ NL+ K
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSR------------EYNLFPK------ 443
Query: 358 ARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNN 417
L MI + G EAL+L +K + + P+ +IL AC N
Sbjct: 444 ------------LEHYGCMIDLLCRAGLLDEALEL---VKAMPVKPDVRICGAILSACKN 488
Query: 418 AGLVEE 423
G + E
Sbjct: 489 RGTLME 494
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/599 (26%), Positives = 307/599 (51%), Gaps = 40/599 (6%)
Query: 21 RAVHAHVISSGF--SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVS 78
R +H++V+ + ++ + + L+ Y++ G + EA LF M + +V+WN +I+ + S
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 79 HGKSKQAVELYGNMLVEG-VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDV 137
+ + +A +L+ N++ +G V PD+ T +I ++L + G+ H + + D
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 138 FVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR 197
V +AL+ YA+F A+ F + KD++ + A++ +A S + L + +++
Sbjct: 367 SVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNE 426
Query: 198 RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL---ESFVASQTSLLTMYSRCSMV 254
+ + T+ S L C N+ + +HG+ VK+GL E +LL Y++C V
Sbjct: 427 AITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNV 486
Query: 255 EDSVKVFNQLA-YASHVTWTSFVVGLVQNGREE--------------------------- 286
E + K+F L+ + V++ S + G V +G +
Sbjct: 487 EYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAES 546
Query: 287 ----VAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAG 342
A+ VFRE+ + PN T+ ++L C+ A + Q H + G+ G+
Sbjct: 547 CCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLK 605
Query: 343 AALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
L+++Y KCG++ A SVF DLV +M+ YA +G G EAL ++ + + +
Sbjct: 606 GTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIK 665
Query: 403 PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAM 462
P+ V ++L AC +AGL+++G Q++ ++ H ++ T E + C +DL+ R R ++A
Sbjct: 666 PDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYS 725
Query: 463 LINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGK 521
+ ++ P+ +W TLL AC + +++ + +LQ D G H+L++N+YA+ K
Sbjct: 726 FVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAK 785
Query: 522 WNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAK 580
W V+E++ ++ ++KK SW++VD + + F++GD SHPR IFD+++ L + K
Sbjct: 786 WEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 134/530 (25%), Positives = 245/530 (46%), Gaps = 60/530 (11%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERH 65
++ CA LT+ RA+H V G C + +++ Y KC + + +K+F +M
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNM-LVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
V WN +++ +S ++ + + M + P + TF+ + LG G+ H
Sbjct: 87 PVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMH 145
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKM-RDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
+ GLE D V +ALV MYAKF + DA+ FD + +KDVV + A+IAG++++ +
Sbjct: 146 SYIIKAGLEK-DTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNM 204
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV---NGQLIHGFIV-KSGLESFVA 239
+A F M+ +PN T+A+ L C ++ ++ +G+ IH ++V +S L++ V
Sbjct: 205 MADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVF 264
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI-RC 298
SL++ Y R +E++ +F ++ V+W + G N A +F ++ +
Sbjct: 265 VCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG 324
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG-MEGNKDAGAALINLYGKCGNVDK 357
VSP+ T+ SIL C+ G++IH+ + + + G ALI+ Y + G+
Sbjct: 325 DVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSA 384
Query: 358 ARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNN 417
A F +++ D++S N+++ A+A + ++ L L + + + VT +S+L C N
Sbjct: 385 AYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCIN 444
Query: 418 ----------------AGLVEE------GCQLFAFMKNNHNIELTREHFTCMIDLLGRSK 455
AGL+ + G L N+E + F LG S+
Sbjct: 445 VQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIF------LGLSE 498
Query: 456 R------------------FEEAAMLINEVTNPDVVLWRTLLNACRIHGE 487
R ++A ML E++ D+ W ++ RI+ E
Sbjct: 499 RRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMV---RIYAE 545
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
+L+ CA SL +R H ++I G L L+D Y KCGS+ A +F R
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRD 632
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH- 124
+V + +M++ + HG+ K+A+ +Y +M + PD + + A GL++ G + +
Sbjct: 633 LVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYD 692
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAH 157
+ V G++ A A VD+ A+ ++ DA+
Sbjct: 693 SIRTVHGMKPTMEQYACA-VDLIARGGRLDDAY 724
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 277/532 (52%), Gaps = 46/532 (8%)
Query: 15 KSLTTLRAVHAHVISSG-FSYCLLGHKLID---GYIKCGSVAEARKLFDEMPERHIVTWN 70
KSLT ++ HA ++ +G F KL+ + +V+ A + + + + T N
Sbjct: 50 KSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHN 109
Query: 71 SMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVL 130
S+I A+ + + A+ ++ ML+ V PD Y+F+ + KA + GR+ HGL +
Sbjct: 110 SVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS 169
Query: 131 GLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEV 190
GL V DVFV + LV++Y + A V DR+ +D V + +L++ Y + GL EA +
Sbjct: 170 GL-VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 191 FREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSR 250
F EM +R V+ S +++ Y+
Sbjct: 229 FDEMEERNVE---------------------------------------SWNFMISGYAA 249
Query: 251 CSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS-PNPFTLSS 309
+V+++ +VF+ + V+W + V G + VF +M+ S P+ FTL S
Sbjct: 250 AGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVS 309
Query: 310 ILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELD 369
+L AC+S GE +H K G+E AL+++Y KCG +DKA VF ++ D
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRD 369
Query: 370 LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFA 429
+ + NS+I + +G G +AL++F + G PNG+TFI +L ACN+ G++++ +LF
Sbjct: 370 VSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE 429
Query: 430 FMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDV-VLWRTLLNACRIHGEI 488
M + + +E T EH+ CM+DLLGR + EEA L+NE+ + +L +LL AC+ G++
Sbjct: 430 MMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQL 489
Query: 489 EMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKS 540
E AE+I ++L+L D + ++NLYAS G+W +VI+ + +R ++ +S
Sbjct: 490 EQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
S+++ CA SL+ VH ++ G L L+D Y KCG + +A ++F +R
Sbjct: 309 SVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR 368
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+ TWNS+IS HG K A+E++ M+ EG P+ TF + A + +G++ R+
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARK 426
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 269/532 (50%), Gaps = 10/532 (1%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
+L+ C ++ R+VH SG + + LI Y KC + A LF EM ++
Sbjct: 156 NLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDK 215
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
V+WN+MI A+ G ++A+ ++ NM + V T + A H
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPLH 269
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLD 184
L V G+ V D+ V ++LV Y++ + A ++ + +V T++++ YA+ G
Sbjct: 270 CLVVKCGM-VNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSL 244
A+ F + +K + L L C G +HG+ +KSGL + L
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 245 LTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS-VSPN 303
+TMYS+ VE + +F QL ++W S + G VQ+GR A VF +M+ + P+
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPD 448
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
T++S+L CS +G+++H T + E ALI++Y KCGN +A SVF
Sbjct: 449 AITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK 508
Query: 364 VLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
+ + NSMI Y+ +G + AL + +++ GL P+ +TF+ +L ACN+ G V+E
Sbjct: 509 SIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDE 568
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNAC 482
G F M I T +H+ M+ LLGR+ F EA LI ++ PD +W LL+AC
Sbjct: 569 GKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSAC 628
Query: 483 RIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRD 534
IH E+E+ E + RK+ L +GG ++L++NLYA+ W+ V+ ++ ++D
Sbjct: 629 IIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 238/490 (48%), Gaps = 24/490 (4%)
Query: 20 LRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVS 78
+ V H+ SG + + L++ Y+K G V A+ LFDEMPER V WN++I +
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 79 HGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVF 138
+G A +L+ ML +G P A T + + G V GR HG+A GLE LD
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLE-LDSQ 187
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR 198
V +AL+ Y+K ++ A ++F + +K V + +I Y+QSGL EA+ VF+ M ++
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 199 VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSV 258
V+ + T+ + L++ V+ + +H +VK G+ + ++ TSL+ YSRC + +
Sbjct: 248 VEISPVTIINLLSA------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
+++ S V TS V + G ++AV F + + + + L IL C +
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 361
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
++G +H K G+ LI +Y K +V+ +F+ L E L+S NS+I
Sbjct: 362 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 421
Query: 379 AYAQNGFGYEALQLFKRIKKL-GLAPNGVTFISILLACNNAGLVEEGCQLFAF-MKNNHN 436
Q+G A ++F ++ GL P+ +T S+L C+ + G +L + ++NN
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNN-- 479
Query: 437 IELTREHFTC--MIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHG-------- 486
E+F C +ID+ + +A + + P W ++++ + G
Sbjct: 480 --FENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSC 537
Query: 487 EIEMAEKIMR 496
+EM EK ++
Sbjct: 538 YLEMREKGLK 547
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 212/438 (48%), Gaps = 10/438 (2%)
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
R + ++S++ + + S + ++ ++L + P+ +T S IF + + +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMS-IFLQATTTSFNSFKLQV 69
Query: 124 HGLAVVLGLEVLD--VFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ L LD V+V ++L+++Y K + A ++FD + E+D V++ ALI GY+++
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
G + +A ++F M+ + P+ TL + L CG G G+ +HG KSGLE +
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS 301
+L++ YS+C+ + + +F ++ S V+W + + Q+G +E A++VF+ M +V
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 302 PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
+P T+ ++L A S E +H + K GM + +L+ Y +CG + A +
Sbjct: 250 ISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
+ + +V + S++ YA+ G A+ F + ++L + + V + IL C + +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
+ G L + + T +I + + E L ++ ++ W ++++
Sbjct: 364 DIGMSLHGYAIKSGLCTKTLV-VNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 422
Query: 482 CRIHGEIEMAEKIMRKVL 499
C G A ++ +++
Sbjct: 423 CVQSGRASTAFEVFHQMM 440
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 164 LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQ 223
L +D+ F +L+ + + +FR+++ + PN +T++ L + +S Q
Sbjct: 9 LYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQ 68
Query: 224 L--IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQ 281
+ + + KSGL+ FV +TSLL +Y + V + +F+++ V W + + G +
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 282 NGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDA 341
NG E A +F M++ SP+ TL ++L C G +H + K G+E +
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 342 GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGL 401
ALI+ Y KC + A +F + + VS N+MI AY+Q+G EA+ +FK + + +
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 402 APNGVTFISILLA 414
+ VT I++L A
Sbjct: 249 EISPVTIINLLSA 261
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/532 (29%), Positives = 266/532 (50%), Gaps = 46/532 (8%)
Query: 21 RAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSH 79
+ +H + GF L L + L++ Y K + A +F EMPE ++V+WN MI
Sbjct: 269 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQE 328
Query: 80 GKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFV 139
+S ++VE M G P+ T ++ A G V GRR
Sbjct: 329 YRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRR----------------- 371
Query: 140 ASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRV 199
+F + + V + A+++GY+ EA+ FR+M + +
Sbjct: 372 -------------------IFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 200 KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVK 259
KP++ TL+ L+SC L G+ IHG ++++ + + L+ +YS C +E S
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 260 VF----NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV-SPNPFTLSSILQAC 314
+F N+L A W S + G N + A+ +FR M + +V PN + +++L +C
Sbjct: 473 IFDDCINELDIA---CWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 529
Query: 315 SSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVN 374
S G Q H + K G + AL ++Y KCG +D AR FD + + V N
Sbjct: 530 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWN 589
Query: 375 SMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN 434
MI+ Y NG G EA+ L++++ G P+G+TF+S+L AC+++GLVE G ++ + M+
Sbjct: 590 EMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI 649
Query: 435 HNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEK 493
H IE +H+ C++D LGR+ R E+A L VLW LL++CR+HG++ +A +
Sbjct: 650 HGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARR 709
Query: 494 IMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSW 545
+ K+++L P ++LL+N Y+S +W+ ++ + ++ K+P +SW
Sbjct: 710 VAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 207/409 (50%), Gaps = 24/409 (5%)
Query: 88 LYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMY 147
++G ++ G+ D Y + + + E G Y R+ V + V DV+ +A +
Sbjct: 28 IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARK-----VFDEMSVRDVYSWNAFLTFR 82
Query: 148 AKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLA 207
K + +A VFD + E+DVV + +I+ + G + +AL V++ MV P+ +TLA
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 208 STLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED-SVKVFNQLAY 266
S L++C + D V G HG VK+GL+ + +LL+MY++C + D V+VF L+
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 267 ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSIL------QACSSRAM- 319
+ V++T+ + GL + + AV +FR M V + LS+IL + C S +
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEI 262
Query: 320 --REVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMI 377
E+G+QIH + +LG G+ +L+ +Y K +++ A +F + E+++VS N MI
Sbjct: 263 YGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 378 YAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
+ Q ++++ R++ G PN VT IS+L AC +G VE G ++F+ +
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP----- 377
Query: 438 ELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRTLLNAC 482
+ + + M+ + +EEA ++ PD +L++C
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 231/512 (45%), Gaps = 92/512 (17%)
Query: 21 RAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEM------------------ 61
+ +H ++ G S L ++L+D YI+CG ARK+FDEM
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 62 -------------PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIF 108
PER +V+WN+MIS V G ++A+ +Y M+ +G LP +T +++
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL-VFDRVLEKD 167
A S++ +G R HG+AV GL+ ++FV +AL+ MYAK + D + VF+ + + +
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDK-NIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 168 VVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA------SCGNLGDSVN 221
V +TA+I G A+ EA+++FR M ++ V+ + L++ L+ C +L +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 222 GQL---IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVG 278
+L IH ++ G + SLL +Y++ + + +F ++ + V+W +VG
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 279 LVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGN 338
Q R + +V M PN T S+L AC
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF----------------------- 361
Query: 339 KDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK 398
+ G+V+ R +F + + + + N+M+ Y+ EA+ F++++
Sbjct: 362 ------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 409
Query: 399 LGLAPNGVTFISILLACNNAGLVEEGCQLFAFM------KNNHNIELTREHFTCMIDLLG 452
L P+ T IL +C +E G Q+ + KN+H + + +I +
Sbjct: 410 QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV-------SGLIAVYS 462
Query: 453 RSKRFEEAAMLINEVTNP-DVVLWRTLLNACR 483
++ E + + ++ N D+ W ++++ R
Sbjct: 463 ECEKMEISECIFDDCINELDIACWNSMISGFR 494
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 216/478 (45%), Gaps = 53/478 (11%)
Query: 36 LLGHKLIDGYIKCGSVAE-ARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
+G+ L+ Y KCG + + ++F+ + + + V++ ++I K +AV+++ M
Sbjct: 174 FVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCE 233
Query: 95 EGVLPDAYTFSAIFK---------AFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVD 145
+GV D+ S I + SE+ G++ H LA+ LG D+ + ++L++
Sbjct: 234 KGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGG-DLHLNNSLLE 292
Query: 146 MYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYT 205
+YAK M A L+F + E +VV + +I G+ Q +++E M D +PNE T
Sbjct: 293 IYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT 352
Query: 206 LASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA 265
S L +C GD VE ++F+ +
Sbjct: 353 CISVLGACFRSGD-----------------------------------VETGRRIFSSIP 377
Query: 266 YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQ 325
S W + + G E A+S FR+M ++ P+ TLS IL +C+ E G+Q
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF-DVLTELDLVSVNSMIYAYAQNG 384
IH + + + N + LI +Y +C ++ + +F D + ELD+ NSMI + N
Sbjct: 438 IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNM 497
Query: 385 FGYEALQLFKRIKKLG-LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREH 443
+AL LF+R+ + L PN +F ++L +C+ + G Q + + + +
Sbjct: 498 LDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS---DS 554
Query: 444 F--TCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVL 499
F T + D+ + + A + V + V+W +++ +G + A + RK++
Sbjct: 555 FVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 147/304 (48%), Gaps = 18/304 (5%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDE-MP 62
S +++ CA + L + +H VI + S + LI Y +C + + +FD+ +
Sbjct: 420 SVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCIN 479
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL-PDAYTFSAIFKAFSELGLVRYGR 121
E I WNSMIS + +A+ L+ M VL P+ +F+ + + S L + +GR
Sbjct: 480 ELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGR 539
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ HGL V G V D FV +AL DMY K ++ A FD VL K+ V++ +I GY +
Sbjct: 540 QFHGLVVKSGY-VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHN 598
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNG-------QLIHGFIVKSGL 234
G EA+ ++R+M+ KP+ T S L +C + G G Q IHG ++ L
Sbjct: 599 GRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG--IEPEL 656
Query: 235 ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY-ASHVTWTSFVVGLVQNGREEVAVSVFR 293
+ ++ ++ R +ED+ K+ Y +S V W + +G +A V
Sbjct: 657 DHYIC----IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE 712
Query: 294 EMIR 297
+++R
Sbjct: 713 KLMR 716
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
++++++ C+ SL R H V+ SG+ S + L D Y KCG + AR+ FD +
Sbjct: 522 FATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVL 581
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG-- 120
++ V WN MI + +G+ +AV LY M+ G PD TF ++ A S GLV G
Sbjct: 582 RKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLE 641
Query: 121 -----RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAH 157
+R HG+ LD ++ +VD + ++ DA
Sbjct: 642 ILSSMQRIHGIE-----PELDHYI--CIVDCLGRAGRLEDAE 676
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 285/579 (49%), Gaps = 66/579 (11%)
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
+R I S +S H + + QAV ++ +G+ +++ + + ++ G+
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAK----------FDKMR------------------ 154
H + G + + +++ L+ MY K FD+M
Sbjct: 68 IHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSG 127
Query: 155 ---DAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
A +VFD + E+DVV + ++ GYAQ G EAL ++E +K NE++ A L
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL------- 264
+C + HG ++ +G S V S++ Y++C +E + + F+++
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 265 ------AYA------------------SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
YA + V+WT+ + G V+ G A+ +FR+MI V
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
P FT SS L A +S A G++IH + + N ++LI++Y K G+++ +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 361 VFDVLTEL-DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
VF + + D V N+MI A AQ+G G++AL++ + K + PN T + IL AC+++G
Sbjct: 368 VFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSG 427
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTL 478
LVEEG + F M H I +EH+ C+IDLLGR+ F+E I E+ PD +W +
Sbjct: 428 LVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAI 487
Query: 479 LNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLK 538
L CRIHG E+ +K ++++L P +ILL+++YA GKW V +++ ++ ++
Sbjct: 488 LGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVN 547
Query: 539 KSPARSWVDVDREVHTFMAGDMS--HPRAHEIFDMLHEL 575
K A SW++++++V F D S H R EI+ +LH L
Sbjct: 548 KEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 200/418 (47%), Gaps = 67/418 (16%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGF-------SYCLLG---------------- 38
+ +SL+ QC TKSL + +H H+ +GF S L+G
Sbjct: 47 DLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFD 106
Query: 39 ----------HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVEL 88
+ ++ GY+K G + AR +FD MPER +V+WN+M+ + G +A+
Sbjct: 107 QMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 89 YGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLG----------------- 131
Y G+ + ++F+ + A + ++ R+AHG +V G
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 132 -------------LEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
+ V D+ + + L+ YAK M A +F + EK+ V +TALIAGY
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
+ G AL++FR+M+ VKP ++T +S L + ++ +G+ IHG+++++ +
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYASH--VTWTSFVVGLVQNGREEVAVSVFREMI 296
+SL+ MYS+ +E S +VF ++ H V W + + L Q+G A+ + +MI
Sbjct: 347 IVISSLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI 405
Query: 297 RCSVSPNPFTLSSILQACSSRAMREVG-EQIHAITTKLGMEGNKDAGAALINLYGKCG 353
+ V PN TL IL ACS + E G ++T + G+ +++ A LI+L G+ G
Sbjct: 406 KFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 177/384 (46%), Gaps = 41/384 (10%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFD--- 59
++ L+T C ++ L R H V+ +GF S +L +ID Y KCG + A++ FD
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 60 ----------------------------EMPERHIVTWNSMISAHVSHGKSKQAVELYGN 91
EMPE++ V+W ++I+ +V G +A++L+
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 92 MLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFD 151
M+ GV P+ +TFS+ A + + +R+G+ HG + + + V S+L+DMY+K
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP-NAIVISSLIDMYSKSG 360
Query: 152 KMRDAHLVFDRVLEK-DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
+ + VF +K D V + +I+ AQ GL +AL + +M+ RV+PN TL L
Sbjct: 361 SLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Query: 211 ASCGNLGDSVNG-QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH 269
+C + G G + V+ G+ L+ + R ++ ++ ++ +
Sbjct: 421 NACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPD 480
Query: 270 VTWTSFVVGLVQ-NGREEVAVSVFREMIRCSV-SPNPFTLSSILQACSSRAMREVGEQIH 327
+ ++G+ + +G EE+ E+I+ S P+ L S + A E+ E++
Sbjct: 481 KHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYA--DHGKWELVEKLR 538
Query: 328 AITTKLGMEGNKDAGAALINLYGK 351
+ K + NK+ + I + K
Sbjct: 539 GVMKKRRV--NKEKAVSWIEIEKK 560
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 232/416 (55%), Gaps = 1/416 (0%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
L+ C+ R VH +++ G ++ L+ Y +CG + A + FD M E+ +
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDV 249
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
++W ++ISA G +A+ ++ ML LP+ +T +I KA SE +R+GR+ H L
Sbjct: 250 ISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSL 309
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGE 186
V ++ DVFV ++L+DMYAK ++ D VFD + ++ V +T++IA +A+ G E
Sbjct: 310 VVKRMIKT-DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 187 ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLT 246
A+ +FR M R + N T+ S L +CG++G + G+ +H I+K+ +E V ++L+
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 247 MYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFT 306
+Y +C D+ V QL V+WT+ + G G E A+ +EMI+ V PNPFT
Sbjct: 429 LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 307 LSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
SS L+AC++ +G IH+I K N G+ALI++Y KCG V +A VFD +
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Query: 367 ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
E +LVS +MI YA+NGF EAL+L R++ G + F +IL C + L E
Sbjct: 549 EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 244/466 (52%), Gaps = 10/466 (2%)
Query: 37 LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
G+ LI ++ G + ARK+FD MPE++ VTW +MI ++ +G +A L+ + + G
Sbjct: 119 FGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHG 178
Query: 97 V-LPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
+ + F + S GR+ HG V +G V ++ V S+LV YA+ ++
Sbjct: 179 IRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG--VGNLIVESSLVYFYAQCGELTS 236
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
A FD + EKDV+ +TA+I+ ++ G +A+ +F M++ PNE+T+ S L +C
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
G+ +H +VK +++ V TSL+ MY++C + D KVF+ ++ + VTWTS
Sbjct: 297 EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
+ + G E A+S+FR M R + N T+ SIL+AC S +G+++HA K +
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTEL---DLVSVNSMIYAYAQNGFGYEALQL 392
E N G+ L+ LY KCG ++R F+VL +L D+VS +MI + G EAL
Sbjct: 417 EKNVYIGSTLVWLYCKCG---ESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDF 473
Query: 393 FKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLG 452
K + + G+ PN T+ S L AC N+ + G + + K NH + + +I +
Sbjct: 474 LKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYA 532
Query: 453 RSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
+ EA + + + ++V W+ ++ +G A K+M ++
Sbjct: 533 KCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 171/320 (53%), Gaps = 2/320 (0%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
S++ C+ K+L R VH+ V+ + +G L+D Y KCG +++ RK+FD M R
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAH 124
+ VTW S+I+AH G ++A+ L+ M ++ + T +I +A +G + G+ H
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELH 408
Query: 125 GLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLD 184
+ +E +V++ S LV +Y K + RDA V ++ +DVV +TA+I+G + G +
Sbjct: 409 AQIIKNSIEK-NVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSL 244
EAL+ +EM+ V+PN +T +S L +C N + G+ IH K+ S V ++L
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSAL 527
Query: 245 LTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNP 304
+ MY++C V ++ +VF+ + + V+W + ++G +NG A+ + M +
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 305 FTLSSILQACSSRAMREVGE 324
+ ++IL C + E E
Sbjct: 588 YIFATILSTCGDIELDEAVE 607
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 285/552 (51%), Gaps = 8/552 (1%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDE 60
+ Y + C++ L +H + I++GF L L LID Y+K G V ARKLFD
Sbjct: 13 SLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDR 72
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ +R +V+W +MIS G A+ L+ M E V + +T+ ++ K+ +LG ++ G
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
+ HG +V G ++ V SAL+ +YA+ KM +A L FD + E+D+V + A+I GY
Sbjct: 133 MQIHG-SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA 191
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
+ + +F+ M+ KP+ +T S L + + +HG +K G A
Sbjct: 192 NACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSAL 251
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQ-NGREEVAVSVFREMIRCS 299
SL+ Y +C + ++ K+ ++ T+ + G Q N A +F++MIR
Sbjct: 252 IRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMK 311
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG-MEGNKDAGAALINLYGKCGNVDKA 358
+ +SS+L+ C++ A +G QIH K + + G +LI++Y K G ++ A
Sbjct: 312 TKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDA 371
Query: 359 RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNA 418
F+ + E D+ S S+I Y ++G +A+ L+ R++ + PN VTF+S+L AC++
Sbjct: 372 VLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHT 431
Query: 419 GLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINE---VTNPDVVLW 475
G E G +++ M N H IE EH +C+ID+L RS EEA LI + + W
Sbjct: 432 GQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTW 491
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDL 535
L+ACR HG +++++ ++L + P +I L ++YA+ G W+ + + +++
Sbjct: 492 GAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKES 551
Query: 536 -KLKKSPARSWV 546
K+P S V
Sbjct: 552 GSCNKAPGYSLV 563
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 112/216 (51%), Gaps = 2/216 (0%)
Query: 199 VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSV 258
+ P+ Y A L S N+ + LIHG + +G S + + L+ +Y + V+ +
Sbjct: 10 LSPSLYLKALKLCSYQNVKKQL--LLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHAR 67
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
K+F++++ V+WT+ + + G A+ +F+EM R V N FT S+L++C
Sbjct: 68 KLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG 127
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
+ G QIH K GN +AL++LY +CG +++AR FD + E DLVS N+MI
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID 187
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
Y N + LF+ + G P+ TF S+L A
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 8/186 (4%)
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
+P L+ CS + +++ IH + G N LI+LY K G+V AR +F
Sbjct: 11 SPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLF 70
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
D +++ D+VS +MI +++ G+ +AL LFK + + + N T+ S+L +C + G ++
Sbjct: 71 DRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLK 130
Query: 423 EGCQLFAFM-KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL-- 479
EG Q+ + K N L + ++ L R + EEA + + + D+V W ++
Sbjct: 131 EGMQIHGSVEKGNCAGNLIVR--SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 480 ---NAC 482
NAC
Sbjct: 189 YTANAC 194
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 262/495 (52%), Gaps = 34/495 (6%)
Query: 112 SELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLF 171
++ +R ++ H + GL V + L A M A+LVF R+ K+ ++
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 172 TALIAGYAQSGLDGEALEVFREMV--DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFI 229
+I G+++S A+ +F +M+ VKP T S + G LG + +G+ +HG +
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 230 VKSGLE--SF-----------------------------VASQTSLLTMYSRCSMVEDSV 258
+K GLE SF V + S++ +++C +++ +
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
+F+++ + V+W S + G V+NGR + A+ +FREM V P+ FT+ S+L AC+
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 319 MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
E G IH + E N ALI++Y KCG +++ +VF+ + L NSMI
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIE 438
A NGF A+ LF +++ GL P+ V+FI +L AC ++G V + F MK + IE
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 439 LTREHFTCMIDLLGRSKRFEEAAMLI-NEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRK 497
+ +H+T M+++LG + EEA LI N D V+W +LL+ACR G +EMA++ +
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 498 VLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMA 557
+ +L P + ++LL+N YAS G + + +E + +++ +++K S ++VD EVH F++
Sbjct: 453 LKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFIS 512
Query: 558 GDMSHPRAHEIFDML 572
+HP++ EI+ +L
Sbjct: 513 CGGTHPKSAEIYSLL 527
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 224/473 (47%), Gaps = 45/473 (9%)
Query: 2 NFYSSLI-TQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAE---ARKL 57
N Y LI TQC+ ++ L+ +HA +I +G + + + C S ++ A +
Sbjct: 25 NTYLRLIDTQCS---TMRELKQIHASLIKTGLISDTVTASRVLAFC-CASPSDMNYAYLV 80
Query: 58 FDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLV--EGVLPDAYTFSAIFKAFSELG 115
F + ++ WN++I + A+ ++ +ML V P T+ ++FKA+ LG
Sbjct: 81 FTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLG 140
Query: 116 LVRYGRRAHGLAVVLGLEVLDVFVASALVDMY---------------------------- 147
R GR+ HG+ + GLE D F+ + ++ MY
Sbjct: 141 QARDGRQLHGMVIKEGLED-DSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 148 ---AKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEY 204
AK + A +FD + +++ V + ++I+G+ ++G +AL++FREM ++ VKP+ +
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 205 TLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL 264
T+ S L +C LG S G+ IH +IV++ E T+L+ MY +C +E+ + VF
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 265 AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS-SRAMREVG 323
W S ++GL NG EE A+ +F E+ R + P+ + +L AC+ S +
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF-DVLTELDLVSVNSMIYAYAQ 382
E + K +E + ++N+ G G +++A ++ ++ E D V +S++ A +
Sbjct: 380 EFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRK 439
Query: 383 NGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
G A + K +KKL ++ + A + GL EE + MK
Sbjct: 440 IGNVEMAKRAAKCLKKLD-PDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQ 491
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 164/587 (27%), Positives = 300/587 (51%), Gaps = 46/587 (7%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
+I QC+ K L + A+ A + +S C L ++ I + A +M E ++
Sbjct: 779 IIKQCSTPKLLES--ALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNV 836
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
+N++ V+ +++ELY ML + V P +YT+S++ KA S +AH
Sbjct: 837 FVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIW 896
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGE 186
G V + + L+D Y+ ++R+A VFD + E+D + +T +++ Y
Sbjct: 897 KFGFGFHVK---IQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY-------- 945
Query: 187 ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLT 246
R ++D + S +L + ++ E A+ L+
Sbjct: 946 -----RRVLD-------------MDSANSLANQMS-------------EKNEATSNCLIN 974
Query: 247 MYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFT 306
Y +E + +FNQ+ ++WT+ + G QN R A++VF +M+ + P+ T
Sbjct: 975 GYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVT 1034
Query: 307 LSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
+S+++ AC+ + E+G+++H T + G + G+AL+++Y KCG++++A VF L
Sbjct: 1035 MSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP 1094
Query: 367 ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQ 426
+ +L NS+I A +GF EAL++F +++ + PN VTF+S+ AC +AGLV+EG +
Sbjct: 1095 KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRR 1154
Query: 427 LFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIH 485
++ M ++++I EH+ M+ L ++ EA LI + P+ V+W LL+ CRIH
Sbjct: 1155 IYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH 1214
Query: 486 GEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK-SPARS 544
+ +AE K++ L P + G + LL ++YA +W V E++ +R+L ++K P S
Sbjct: 1215 KNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTS 1274
Query: 545 WVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFV 591
+ +D+ H F A D SH + E+ +L E+ ++ GY +T V
Sbjct: 1275 SIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 68/340 (20%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
YSSL+ + ++ AH+ GF + + + LID Y G + EARK+FDEMP
Sbjct: 874 YSSLVKASSFASRFG--ESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMP 931
Query: 63 ERHIVTWNSMISA-------------------------------HVSHGKSKQAVELYGN 91
ER + W +M+SA ++ G +QA L+
Sbjct: 932 ERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQ 991
Query: 92 MLV-------------------------------EGVLPDAYTFSAIFKAFSELGLVRYG 120
M V EG++PD T S + A + LG++ G
Sbjct: 992 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG 1051
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
+ H + G VLDV++ SALVDMY+K + A LVF + +K++ + ++I G A
Sbjct: 1052 KEVHMYTLQNGF-VLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAA 1110
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIH-GFIVKSGLESFVA 239
G EAL++F +M VKPN T S +C + G G+ I+ I + S V
Sbjct: 1111 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 1170
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASH-VTWTSFVVG 278
++ ++S+ ++ +++++ + + + V W + + G
Sbjct: 1171 HYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/541 (31%), Positives = 288/541 (53%), Gaps = 18/541 (3%)
Query: 17 LTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISA 75
L+ ++ H ++ G ++ L +KL+ Y K +A KLFDEMP R+IVTWN +I
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 76 HVSH-GKSKQAVEL----YGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVL 130
+ G + L +L V D +F + + ++ ++ G + H L V
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 131 GLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEV 190
GLE F +++LV Y K + +A VF+ VL++D+VL+ AL++ Y +G+ EA +
Sbjct: 172 GLES-SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGL 230
Query: 191 FREMVD--RRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMY 248
+ M R + + +T +S L++C G+ IH + K + + T+LL MY
Sbjct: 231 LKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMY 286
Query: 249 SRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLS 308
++ + + D+ + F + + V+W + +VG QNG A+ +F +M+ ++ P+ T +
Sbjct: 287 AKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFA 346
Query: 309 SILQACSS-RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE 367
S+L +C+ A+ E+ +Q+ A+ TK G +LI+ Y + GN+ +A F + E
Sbjct: 347 SVLSSCAKFSAIWEI-KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE 405
Query: 368 LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQL 427
DLVS S+I A A +GF E+LQ+F+ + + L P+ +TF+ +L AC++ GLV+EG +
Sbjct: 406 PDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRC 464
Query: 428 FAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHG 486
F M + IE EH+TC+IDLLGR+ +EA+ ++N + T P C IH
Sbjct: 465 FKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHE 524
Query: 487 EIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEM-KTTIRDLKLKKSPARSW 545
+ E + +K+L++ P + +L+N Y S G WNQ + K R+ K+P SW
Sbjct: 525 KRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSW 584
Query: 546 V 546
+
Sbjct: 585 L 585
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 191/366 (52%), Gaps = 10/366 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ LI C + ++ +H ++ G S C L+ Y KCG + EAR++F+ +
Sbjct: 145 FMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL 204
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG--VLPDAYTFSAIFKAFSELGLVRYG 120
+R +V WN+++S++V +G +A L M + D +TFS++ A + G
Sbjct: 205 DRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQG 260
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
++ H + + + D+ VA+AL++MYAK + + DA F+ ++ ++VV + A+I G+AQ
Sbjct: 261 KQIHAILFKVSYQ-FDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
+G EA+ +F +M+ ++P+E T AS L+SC + + + K G F++
Sbjct: 320 NGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSV 379
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
SL++ YSR + +++ F+ + V+WTS + L +G E ++ +F M++ +
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KL 438
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKL-GMEGNKDAGAALINLYGKCGNVDKAR 359
P+ T +L ACS + + G + T+ +E + LI+L G+ G +D+A
Sbjct: 439 QPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEAS 498
Query: 360 SVFDVL 365
V + +
Sbjct: 499 DVLNSM 504
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 298/552 (53%), Gaps = 18/552 (3%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDE-- 60
++++++ C + SL + VH+ VI +GF + + LI Y C V +A +F+E
Sbjct: 193 FATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETD 251
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ R VT+N +I ++ K +++ ++ ML + P TF ++ + S + G
Sbjct: 252 VAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---G 307
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
+ HGLA+ G E V++A + MY+ F+ AH VF+ + EKD+V + +I+ Y Q
Sbjct: 308 HQVHGLAIKTGYEKY-TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 181 SGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
+ L A+ V++ M VKP+E+T S LA+ +L D + +++ I+K GL S +
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL-DVL--EMVQACIIKFGLSSKIEI 423
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+L++ YS+ +E + +F + + ++W + + G NG + F ++ V
Sbjct: 424 SNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV 483
Query: 301 S--PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
P+ +TLS++L C S + +G Q HA + G G ALIN+Y +CG + +
Sbjct: 484 RILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNS 543
Query: 359 RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISILLACNN 417
VF+ ++E D+VS NS+I AY+++G G A+ +K ++ G + P+ TF ++L AC++
Sbjct: 544 LEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSH 603
Query: 418 AGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLIN---EVTNPDVVL 474
AGLVEEG ++F M H + +HF+C++DLLGR+ +EA L+ + V +
Sbjct: 604 AGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDV 663
Query: 475 WRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRD 534
W L +AC HG++++ + + + +++ D ++ L+N+YA AG W + E + I
Sbjct: 664 WWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINM 723
Query: 535 LKLKKSPARSWV 546
+ K SW+
Sbjct: 724 IGAMKQRGCSWM 735
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/575 (26%), Positives = 263/575 (45%), Gaps = 58/575 (10%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDE------ 60
IT H + VH + I SG + + + L+ Y + G++A +K FDE
Sbjct: 64 ITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDV 123
Query: 61 -------------------------MPER-HIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
MPER + WN+MI+ G + +VEL+ M
Sbjct: 124 YSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHK 183
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMR 154
GV D + F+ I + + G + +G++ H L + G + V +AL+ MY +
Sbjct: 184 LGVRHDKFGFATIL-SMCDYGSLDFGKQVHSLVIKAGFFIASS-VVNALITMYFNCQVVV 241
Query: 155 DAHLVFDR--VLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
DA LVF+ V +D V F +I G A D E+L VFR+M++ ++P + T S + S
Sbjct: 242 DACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGS 300
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
C + G +HG +K+G E + + +TMYS + KVF L VTW
Sbjct: 301 CSC---AAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTW 357
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
+ + Q + A+SV++ M V P+ FT S+L ++ +V E + A K
Sbjct: 358 NTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIK 414
Query: 333 LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQL 392
G+ + ALI+ Y K G ++KA +F+ +L+S N++I + NGF +E L+
Sbjct: 415 FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 393 FKRI--KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDL 450
F + ++ + P+ T ++L C + + G Q A++ + + T +I++
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG-NALINM 533
Query: 451 LGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMA---EKIMRKVLQLAPGDGG 507
+ + + + N+++ DVV W +L++A HGE E A K M+ ++ P D
Sbjct: 534 YSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIP-DAA 592
Query: 508 THILLTNLYASAGK-------WNQVIEMKTTIRDL 535
T + + + AG +N ++E IR++
Sbjct: 593 TFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNV 627
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 162/353 (45%), Gaps = 63/353 (17%)
Query: 175 IAGYAQSGLDGEALEVFREMVDR--RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKS 232
+ G +SG + AL++F + V R ++P++Y+++ + + +L D++ G +H + ++S
Sbjct: 28 LTGLTRSGENRNALKLFAD-VHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRS 86
Query: 233 GL-------------------------------ESFVASQTSLLTMYSRCSMVEDSVKVF 261
GL E V S T+LL+ + +E + +VF
Sbjct: 87 GLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVF 146
Query: 262 NQLAYASHVT-WTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMR 320
+++ V W + + G ++G E +V +FREM + V + F ++IL C ++
Sbjct: 147 DKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSL- 205
Query: 321 EVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF---DVLTELDLVSVNSMI 377
+ G+Q+H++ K G ALI +Y C V A VF DV D V+ N +I
Sbjct: 206 DFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVR-DQVTFNVVI 264
Query: 378 YAYAQNGFGY-EALQLFKRIKKLGLAPNGVTFISILLACNNAGL--------VEEGCQLF 428
A GF E+L +F+++ + L P +TF+S++ +C+ A + ++ G + +
Sbjct: 265 DGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKY 322
Query: 429 AFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
+ N T ++ D K FE + D+V W T++++
Sbjct: 323 TLVSN-----ATMTMYSSFEDFGAAHKVFE-------SLEEKDLVTWNTMISS 363
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 295/558 (52%), Gaps = 11/558 (1%)
Query: 6 SLITQCAHTKSLTTLRA-VHAHVISSGFSYC--LLGHKLIDGYIKCGSVAEARKLFDEMP 62
S+I CA + L A +H + +G + C ++ + LI Y K RK+FDEM
Sbjct: 51 SVIKACAFQQEPFLLGAQLHCLCLKAG-ADCDTVVSNSLISMYAKFSRKYAVRKVFDEML 109
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLV-RYGR 121
R V++ S+I++ G +A++L M G +P + +++ + +G + R
Sbjct: 110 HRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVAR 169
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
H L +V V +++ALVDMY KFD A VFD++ K+ V +TA+I+G +
Sbjct: 170 MFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVAN 229
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCG--NLGDSVNGQLIHGFIVKSGLESFVA 239
+++FR M ++PN TL S L +C N G S+ + IHGF + G +
Sbjct: 230 QNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKE-IHGFSFRHGCHADER 288
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
+ +TMY RC V S +F V W+S + G + G +++ +M +
Sbjct: 289 LTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEG 348
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
+ N TL +I+ AC++ + +H+ K G + G ALI++Y KCG++ AR
Sbjct: 349 IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAR 408
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
VF LTE DLVS +SMI AY +G G EAL++FK + K G + + F++IL ACN+AG
Sbjct: 409 EVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAG 468
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA-AMLINEVTNPDVVLWRTL 478
LVEE +F +++ +T EH+ C I+LLGR + ++A + IN P +W +L
Sbjct: 469 LVEEAQTIFT-QAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSL 527
Query: 479 LNACRIHGEIEMAEKIM-RKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKL 537
L+AC HG +++A KI+ ++++ P + ++LL+ ++ +G ++ E++ ++ KL
Sbjct: 528 LSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKL 587
Query: 538 KKSPARSWVDVDREVHTF 555
K S ++ + ++ +
Sbjct: 588 NKCYGFSKIEPELQIEDY 605
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 278/502 (55%), Gaps = 20/502 (3%)
Query: 54 ARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD--AYTFSAIFKAF 111
A LFDE+P+R + + NS +S+H+ G + L+ + + PD ++TF+ + A
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGAC 94
Query: 112 SELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLF 171
S L GR+ H L + G E +AL+DMY+K+ + D+ VF+ V EKD+V +
Sbjct: 95 SLLSYPETGRQVHALMIKQGAET-GTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSW 153
Query: 172 TALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVK 231
AL++G+ ++G EAL VF M RV+ +E+TL+S + +C +L G+ +H +V
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 232 SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL-AYASHVTWTSFVVGLVQNGREEVAVS 290
+G V T++++ YS ++ +++KV+N L + V S + G ++N + A
Sbjct: 214 TG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA-- 270
Query: 291 VFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYG 350
F M R PN LSS L CS + +G+QIH + + G + L+++YG
Sbjct: 271 -FLLMSR--QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYG 327
Query: 351 KCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRI--KKLGLAPNGVTF 408
KCG + +AR++F + +VS SMI AYA NG G +AL++F+ + + G+ PN VTF
Sbjct: 328 KCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTF 387
Query: 409 ISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT 468
+ ++ AC +AGLV+EG + F MK + + EH+ C ID+L ++ EE L+ +
Sbjct: 388 LVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMM 447
Query: 469 NPD-----VVLWRTLLNACRIHGEIEMAEKIMRKVL-QLAPGDGGTHILLTNLYASAGKW 522
D +W +L+AC ++ ++ E + R+++ + P + ++L++N YA+ GKW
Sbjct: 448 ENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKW 507
Query: 523 NQVIEMKTTIRDLKLKKSPARS 544
+ V E++ +++ L K+ S
Sbjct: 508 DVVEELRGKLKNKGLVKTAGHS 529
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 187/380 (49%), Gaps = 12/380 (3%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMP 62
++ ++ C+ T R VHA +I G + LID Y K G + ++ ++F+ +
Sbjct: 87 FTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVE 146
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
E+ +V+WN+++S + +GK K+A+ ++ M E V +T S++ K + L +++ G++
Sbjct: 147 EKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQ 206
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV-LEKDVVLFTALIAGYAQS 181
H + VV G ++ V + +A++ Y+ + +A V++ + + D V+ +LI+G ++
Sbjct: 207 VHAMVVVTGRDL--VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRN 264
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
EA ++ R +PN L+S+LA C + D G+ IH +++G S
Sbjct: 265 RNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC 319
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR--CS 299
L+ MY +C + + +F + S V+WTS + NG A+ +FREM
Sbjct: 320 NGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSG 379
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITT-KLGMEGNKDAGAALINLYGKCGNVDKA 358
V PN T ++ AC+ + + G++ + K + + I++ K G ++
Sbjct: 380 VLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEI 439
Query: 359 RSVFDVLTELDLVSVNSMIY 378
+ + + E D S+ I+
Sbjct: 440 WRLVERMMENDNQSIPCAIW 459
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 287/544 (52%), Gaps = 50/544 (9%)
Query: 15 KSLTTLRAVHAHVISSGF--SYCLLGHKLIDGYIKC-GSVAEARKLFDEMPERHIVTWNS 71
K++ TL+ +HA ++ +G + ++G + + G++ A KLFDE+P+ + N
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNH 82
Query: 72 MISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLG 131
++ K ++ V LY M GV PD YTF+ + KA S+L G HG V G
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 132 LEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVF 191
VL+ +V +AL+ +A + A +FD + V ++++ +GYA+ G EA+ +F
Sbjct: 143 F-VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF 201
Query: 192 REMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRC 251
EM P + +A + G L +C
Sbjct: 202 DEM------PYKDQVAWNVMITGCL---------------------------------KC 222
Query: 252 SMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSIL 311
++ + ++F++ VTW + + G V G + A+ +F+EM P+ T+ S+L
Sbjct: 223 KEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLL 282
Query: 312 QACSSRAMREVGEQIHA-ITTKLGMEGNKDAGA----ALINLYGKCGNVDKARSVFDVLT 366
AC+ E G+++H I + + G ALI++Y KCG++D+A VF +
Sbjct: 283 SACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK 342
Query: 367 ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQ 426
+ DL + N++I A + ++++F+ +++L + PN VTFI ++LAC+++G V+EG +
Sbjct: 343 DRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRK 401
Query: 427 LFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIH 485
F+ M++ +NIE +H+ CM+D+LGR+ + EEA M + + P+ ++WRTLL AC+I+
Sbjct: 402 YFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIY 461
Query: 486 GEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSW 545
G +E+ + K+L + + G ++LL+N+YAS G+W+ V +++ D ++KK S
Sbjct: 462 GNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSL 521
Query: 546 VDVD 549
++ D
Sbjct: 522 IEED 525
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 13/226 (5%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVI------SSGFSYCLLGHKLIDGYIKCGSVAEARKLFD 59
SL++ CA L T + +H +++ SS + + + LID Y KCGS+ A ++F
Sbjct: 280 SLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR 339
Query: 60 EMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
+ +R + TWN++I H ++ ++E++ M V P+ TF + A S G V
Sbjct: 340 GVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDE 398
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV-LEKDVVLFTALIAG- 177
GR+ L + ++ +VDM + ++ +A + + + +E + +++ L+
Sbjct: 399 GRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGAC 458
Query: 178 --YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN 221
Y L A E M R+ + +Y L S + + D V
Sbjct: 459 KIYGNVELGKYANEKLLSM--RKDESGDYVLLSNIYASTGQWDGVQ 502
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/655 (27%), Positives = 314/655 (47%), Gaps = 106/655 (16%)
Query: 24 HAHVISSGFSYCLLG-HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKS 82
H I SG + + ++L++ Y K G + EAR +FDEM ER++ +WN++I+A+V
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 83 KQAVELYG-----------NMLVEG-------------------------VLPDAYTFSA 106
K+A EL+ N L+ G + D +T +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 107 IFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF------ 160
+ K ++L V YG + HG+ V G + F S+L+ MY+K K ++ +F
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTK-FAVSSLIHMYSKCGKFKEVCNIFNGSCVE 189
Query: 161 --------------------DRVLE--------KDVVLFTALIAGYAQSGLDGEALEVFR 192
D+ L D + + LIAGYAQ+G + EAL++
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAV 249
Query: 193 EMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES--FVAS---------- 240
M + +K +E++ + L +L G+ +H ++K+G S FV+S
Sbjct: 250 SMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCG 309
Query: 241 -------------------QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQ 281
+S++ YS + ++ ++F+ L+ + V WT+ +G +
Sbjct: 310 NMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLN 369
Query: 282 NGREEVAVSVFREMIRCSV-SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
+ + + + R I +P+ + S+L ACS +A E G++IH + + G+ +K
Sbjct: 370 LRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKK 429
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
A +++Y KCGNV+ A +FD E D V N+MI A +G ++ Q F+ + + G
Sbjct: 430 LVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGG 489
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA 460
P+ +TF+++L AC + GLV EG + F M +NI H+TCMIDL G++ R ++A
Sbjct: 490 FKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKA 549
Query: 461 AMLINEV--TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYAS 518
L+ + D V+ LNAC + E+ +++ K+L + +G +I + N YAS
Sbjct: 550 IELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYAS 609
Query: 519 AGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLH 573
+G+W+++ ++ +R +L+ SW ++D++ H F + D+SH I+ MLH
Sbjct: 610 SGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLH 664
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 126/245 (51%), Gaps = 12/245 (4%)
Query: 22 AVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
A AH++ GF +I GY G + EA++LFD + E+++V W +M +++ +
Sbjct: 314 AESAHLLY-GFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQ 372
Query: 82 SKQAVELYGNMLV-EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVA 140
+EL + E PD+ ++ A S + G+ HG ++ G+ ++D +
Sbjct: 373 PDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI-LMDKKLV 431
Query: 141 SALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVK 200
+A VDMY+K + A +FD E+D V++ A+IAG A G + ++ + F +M + K
Sbjct: 432 TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 201 PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ-----TSLLTMYSRCSMVE 255
P+E T + L++C + G + G+ KS +E++ S T ++ +Y + ++
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEK----YFKSMIEAYNISPETGHYTCMIDLYGKAYRLD 547
Query: 256 DSVKV 260
++++
Sbjct: 548 KAIEL 552
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/591 (28%), Positives = 295/591 (49%), Gaps = 46/591 (7%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
+SL++ C + +HAH ISSG + +L KL+ Y + EA+ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
H + WN +I +++ + + +++V +Y M+ +G+ D +T+ ++ KA + L YGR
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV 206
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
HG ++ + +++V +AL+ MY +F K+ A +FDR+ E+D V + A+I Y
Sbjct: 207 HG-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 184 DGEALEVFREMV-----------------------------------DRRVKPNEYTLAS 208
GEA ++ M + V+ + +
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 209 TLASCGNLGDSVNGQLIHGFIVKSGLESFVAS--QTSLLTMYSRCSMVEDSVKVFNQLAY 266
L +C ++G G++ H +++S S + SL+TMYSRCS + + VF Q+
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 267 ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI 326
S TW S + G N R E + +EM+ PN TL+SIL + + G++
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF 445
Query: 327 HAITTKLGMEGNKDA---GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQN 383
H L + KD +L+++Y K G + A+ VFD + + D V+ S+I Y +
Sbjct: 446 HCYI--LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 384 GFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREH 443
G G AL FK + + G+ P+ VT +++L AC+++ LV EG LF M++ I L EH
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH 563
Query: 444 FTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRK-VLQL 501
++CM+DL R+ ++A + + + P + TLL AC IHG + E K +L+
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLET 623
Query: 502 APGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREV 552
P G ++LL ++YA G W++++ +KT + DL ++K+ + ++ D E+
Sbjct: 624 KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 5/240 (2%)
Query: 185 GEALEVFREMVDRRVKPNE-----YTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
G+ E FR R + Y+ AS L++C + V GQ +H + SGLE
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
L+T YS ++++++ + + W + ++N R + +VSV++ M+
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
+ + FT S+++AC++ G +H N ALI++Y + G VD AR
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
+FD ++E D VS N++I Y EA +L R+ G+ + VT+ +I C AG
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/591 (28%), Positives = 295/591 (49%), Gaps = 46/591 (7%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
+SL++ C + +HAH ISSG + +L KL+ Y + EA+ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
H + WN +I +++ + + +++V +Y M+ +G+ D +T+ ++ KA + L YGR
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVV 206
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
HG ++ + +++V +AL+ MY +F K+ A +FDR+ E+D V + A+I Y
Sbjct: 207 HG-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 184 DGEALEVFREMV-----------------------------------DRRVKPNEYTLAS 208
GEA ++ M + V+ + +
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 209 TLASCGNLGDSVNGQLIHGFIVKSGLESFVAS--QTSLLTMYSRCSMVEDSVKVFNQLAY 266
L +C ++G G++ H +++S S + SL+TMYSRCS + + VF Q+
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 267 ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI 326
S TW S + G N R E + +EM+ PN TL+SIL + + G++
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEF 445
Query: 327 HAITTKLGMEGNKDA---GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQN 383
H L + KD +L+++Y K G + A+ VFD + + D V+ S+I Y +
Sbjct: 446 HCYI--LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 384 GFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREH 443
G G AL FK + + G+ P+ VT +++L AC+++ LV EG LF M++ I L EH
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH 563
Query: 444 FTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRK-VLQL 501
++CM+DL R+ ++A + + + P + TLL AC IHG + E K +L+
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLET 623
Query: 502 APGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREV 552
P G ++LL ++YA G W++++ +KT + DL ++K+ + ++ D E+
Sbjct: 624 KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 5/240 (2%)
Query: 185 GEALEVFREMVDRRVKPNE-----YTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
G+ E FR R + Y+ AS L++C + V GQ +H + SGLE
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
L+T YS ++++++ + + W + ++N R + +VSV++ M+
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
+ + FT S+++AC++ G +H N ALI++Y + G VD AR
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
+FD ++E D VS N++I Y EA +L R+ G+ + VT+ +I C AG
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 282/542 (52%), Gaps = 38/542 (7%)
Query: 51 VAEARKLFDEMPERH-IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL-PDAYTFSAIF 108
+ ARKLFD+ P+R NSMI A++ + + LY ++ E PD +TF+ +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDV 168
K+ S V G + H G D++V++ +VDMYAKF KM A FD + +
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGF-CADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE 144
Query: 169 VLFTALIAGYAQSGLDGEALEVFREM------------VDRRVKPNEYTLASTLASCGNL 216
V +TALI+GY + G A ++F +M +D VK + T A L
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFD---- 200
Query: 217 GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFV 276
++ H ++ + T+++ Y ++ + K+F+ + + V+W + +
Sbjct: 201 ------EMTHKTVI---------TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 277 VGLVQNGREEVAVSVFREM-IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
G QN + + + +F+EM S+ P+ T+ S+L A S +GE H + +
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL 305
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKR 395
+ A++++Y KCG ++KA+ +FD + E + S N+MI+ YA NG AL LF
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 396 IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSK 455
+ + P+ +T ++++ ACN+ GLVEEG + F M+ + EH+ CM+DLLGR+
Sbjct: 366 MM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAG 423
Query: 456 RFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTN 514
+EA LI + P+ ++ + L+AC + +IE AE+I++K ++L P + G ++LL N
Sbjct: 424 SLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRN 483
Query: 515 LYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHE 574
LYA+ +W+ +K +R + KK S ++++ V F++GD +HP I +L +
Sbjct: 484 LYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGD 543
Query: 575 LI 576
L+
Sbjct: 544 LL 545
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 155/365 (42%), Gaps = 53/365 (14%)
Query: 1 MNFYSSLITQCAHTKSLTTLRAVHAHVISSGFS------YCLLGHK-------LIDGYIK 47
++ S L Q H K + A+ + SG + + HK +I GY
Sbjct: 160 LDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCN 219
Query: 48 CGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL-PDAYTFSA 106
+ ARKLFD MPER++V+WN+MI + + + ++ + L+ M L PD T +
Sbjct: 220 IKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILS 279
Query: 107 IFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK 166
+ A S+ G + G H L+ V V +A++DMY+K ++ A +FD + EK
Sbjct: 280 VLPAISDTGALSLGEWCHCFVQRKKLDK-KVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
Query: 167 DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIH 226
V + A+I GYA +G AL++F M+ KP+E T+ + + +C + G G+
Sbjct: 339 QVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWF 397
Query: 227 GFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREE 286
+ + GL + + ++ + R ++++ + + +
Sbjct: 398 HVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPF-------------------- 437
Query: 287 VAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALI 346
PN LSS L AC E E+I + + +E D L+
Sbjct: 438 --------------EPNGIILSSFLSACGQYKDIERAERI--LKKAVELEPQNDGNYVLL 481
Query: 347 -NLYG 350
NLY
Sbjct: 482 RNLYA 486
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/607 (27%), Positives = 301/607 (49%), Gaps = 38/607 (6%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFD-- 59
++S L+ + +KS T + VHA ++ +GF G++ + Y K GSV A +LFD
Sbjct: 6 YFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDI 65
Query: 60 -----------------------------EMPERHIVTWNSMISAHVSHGKSKQAVELYG 90
EMPER +V+WN+MIS VS G + + ++
Sbjct: 66 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 91 NMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKF 150
+M + P +TFS + S + VR+G + HG A+ G+ ++ V ++++DMY +
Sbjct: 126 DMQRWEIRPTEFTFSILA---SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRL 182
Query: 151 DKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
A VF + ++DVV + LI + SG AL+ F M + ++P+EYT++ +
Sbjct: 183 GVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVV 242
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
+ C +L + G+ +K G S + + M+S+C+ ++DSVK+F +L V
Sbjct: 243 SICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSV 302
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAIT 330
S + + E A+ +F + SV P+ FT SS+L + ++ M + G +H++
Sbjct: 303 LCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLV 361
Query: 331 TKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEAL 390
KLG + + +L+ +Y K G+VD A VF DL+ N++I A+N E+L
Sbjct: 362 IKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESL 421
Query: 391 QLFKR-IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMID 449
+F + + L P+ VT + IL+AC AG V EG Q+F+ M+ H + EH+ C+I+
Sbjct: 422 AIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIE 481
Query: 450 LLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGT 508
LL R EA + +++ P +W +L A G+ +AE + + +L+ P
Sbjct: 482 LLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFP 541
Query: 509 HILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEI 568
+++L +Y +W ++++ + + KLK + S + ++ V +F A + H+
Sbjct: 542 YLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDT 601
Query: 569 FDMLHEL 575
+L L
Sbjct: 602 CALLDLL 608
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 235/461 (50%), Gaps = 40/461 (8%)
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGL--DGEALEVFREMVDRRV-KPNEYTLASTLAS 212
A +FDR + L+ A++ Y+ S A FR MV+R V +PN + L S
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS 135
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL--------------------------- 245
L + + L+H + KSG +V QT+LL
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 246 -----TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI-RCS 299
+ Y+R + ++V +F + +W + + QNG AVS+FR MI S
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
+ PN T+ +L AC+ ++ + IHA + + + +L++LYGKCGN+++A
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGL---APNGVTFISILLACN 416
SVF + ++ L + NSMI +A +G EA+ +F+ + KL + P+ +TFI +L AC
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 417 NAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLW 475
+ GLV +G F M N IE EH+ C+IDLLGR+ RF+EA +++ + D +W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDL 535
+LLNAC+IHG +++AE ++ ++ L P +GG ++ NLY G W + + I+
Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQ 495
Query: 536 KLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELI 576
K P S +++D EVH F + D SHP EI+ +L LI
Sbjct: 496 NAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 186/404 (46%), Gaps = 44/404 (10%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVISSGFSYC-LLGHKLID-GYIKCGSVAEARKLFDE 60
F S++I++ H L L+ V + +I SG S+ L KL+ ++ +++ AR +FD
Sbjct: 26 FISAVISKSRH---LNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 61 M--PERHI-----VTWNSMISAHVSHGKS------KQAVELYGNMLVEGVLPDAYTFSA- 106
P H+ ++S + H S S ++V + + VL S+
Sbjct: 83 FSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA 142
Query: 107 ---------IFKAFSELGLVRYGRRAHGLA-----VVLGLEVLD------VFVASALVDM 146
+FK+ L +V H A + L ++ D V +A++
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSG 202
Query: 147 YAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR-RVKPNEYT 205
YA+ + +A +F+ + E+DV + A++A Q+GL EA+ +FR M++ ++PNE T
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVT 262
Query: 206 LASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA 265
+ L++C G + IH F + L S V SL+ +Y +C +E++ VF +
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMAS 322
Query: 266 YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVS---PNPFTLSSILQACSSRAMREV 322
S W S + +GR E A++VF EM++ +++ P+ T +L AC+ +
Sbjct: 323 KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSK 382
Query: 323 GE-QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
G +T + G+E + LI+L G+ G D+A V +
Sbjct: 383 GRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/664 (28%), Positives = 316/664 (47%), Gaps = 103/664 (15%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+++SL+++ A T L R + + C + ++ GY+KC + EA LF EMP
Sbjct: 79 YWTSLLSKYAKTGYLDEARVLFEVMPERNIVTC---NAMLTGYVKCRRMNEAWTLFREMP 135
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYG----------NMLVEGVL--PDAYTFSAIFKA 110
+++V+W M++A G+S+ AVEL+ N LV G++ D +F A
Sbjct: 136 -KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDA 194
Query: 111 FSELGLVRYGRRAHGLAVVLGLEVL----------DVFVASALVDMYAKFDKMRDAHLVF 160
+V + G G+E +V +++V Y ++ +R+A+ +F
Sbjct: 195 MPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLF 254
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM---VDRRVKPNEYTLASTLASCGNLG 217
+ E+++V +TA+I+G+A + L EAL +F EM VD V PN TL S +CG LG
Sbjct: 255 CEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA-VSPNGETLISLAYACGGLG 313
Query: 218 DSVN--GQLIHGFIVKSGLES-------------------FVASQTSLL----------- 245
G+ +H ++ +G E+ +AS SLL
Sbjct: 314 VEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNI 373
Query: 246 ---------------TMYSRCSMVEDSVK-------------------VFNQLAYASHVT 271
T++ R + D V +F +L VT
Sbjct: 374 IINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT 433
Query: 272 WTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITT 331
WT + GLVQN A S+ +M+RC + P T S +L + + + + G+ IH +
Sbjct: 434 WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIA 493
Query: 332 KLGMEGNKDA--GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA 389
K + D +L+++Y KCG ++ A +F + + D VS NSMI + +G +A
Sbjct: 494 KTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKA 553
Query: 390 LQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMID 449
L LFK + G PN VTF+ +L AC+++GL+ G +LF MK ++I+ +H+ MID
Sbjct: 554 LNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMID 613
Query: 450 LLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIE----MAEKIMRKVLQLAPG 504
LLGR+ + +EA I+ + PD ++ LL C ++ + +AE+ ++L+L P
Sbjct: 614 LLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPV 673
Query: 505 DGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPR 564
+ H+ L N+YA G+ + EM+ + +KK+P SWV V+ + F++GD S
Sbjct: 674 NAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASE 733
Query: 565 AHEI 568
A ++
Sbjct: 734 AAQM 737
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 244/464 (52%), Gaps = 33/464 (7%)
Query: 138 FVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR 197
F+ + +VD K + M A +F++V +V L+ ++I Y + L + + ++++++ +
Sbjct: 43 FMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK 102
Query: 198 RVK-PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED 256
+ P+ +T SC +LG G+ +HG + K G V ++ +L+ MY + + D
Sbjct: 103 SFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVD 162
Query: 257 SVKVFNQL-------------AYA------------------SHVTWTSFVVGLVQNGRE 285
+ KVF+++ YA + V+WT+ + G G
Sbjct: 163 AHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCY 222
Query: 286 EVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAAL 345
A+ FREM + P+ +L S+L +C+ E+G+ IH + G AL
Sbjct: 223 VEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNAL 282
Query: 346 INLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNG 405
I +Y KCG + +A +F + D++S ++MI YA +G + A++ F +++ + PNG
Sbjct: 283 IEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNG 342
Query: 406 VTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLIN 465
+TF+ +L AC++ G+ +EG + F M+ ++ IE EH+ C+ID+L R+ + E A +
Sbjct: 343 ITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITK 402
Query: 466 EVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQ 524
+ PD +W +LL++CR G +++A M +++L P D G ++LL N+YA GKW
Sbjct: 403 TMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWED 462
Query: 525 VIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEI 568
V ++ IR+ +KK+P S ++V+ V F++GD S P EI
Sbjct: 463 VSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI 506
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 182/382 (47%), Gaps = 35/382 (9%)
Query: 14 TKSLTTLRAVHAHVISSGFSYC-LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSM 72
KS + ++A +I G S + K++D K + A +LF+++ ++ +NS+
Sbjct: 20 VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSI 79
Query: 73 ISAHVSHGKSKQAVELYGNMLVEGV-LPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLG 131
I A+ + + +Y +L + LPD +TF +FK+ + LG G++ HG G
Sbjct: 80 IRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 132 LEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ----------- 180
V +AL+DMY KFD + DAH VFD + E+DV+ + +L++GYA+
Sbjct: 140 PR-FHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 181 ---------------SGLDG-----EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
SG G EA++ FREM ++P+E +L S L SC LG
Sbjct: 199 HLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLE 258
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLV 280
G+ IH + + G +L+ MYS+C ++ ++++F Q+ ++W++ + G
Sbjct: 259 LGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG-EQIHAITTKLGMEGNK 339
+G A+ F EM R V PN T +L ACS M + G + +E
Sbjct: 319 YHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKI 378
Query: 340 DAGAALINLYGKCGNVDKARSV 361
+ LI++ + G +++A +
Sbjct: 379 EHYGCLIDVLARAGKLERAVEI 400
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 148/328 (45%), Gaps = 49/328 (14%)
Query: 240 SQTSLLT--MYSRCSMVED---SVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFRE 294
SQ+S + M C +ED + ++FNQ++ + + S + N + ++++
Sbjct: 39 SQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQ 98
Query: 295 MIRCSVS-PNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
++R S P+ FT + ++C+S +G+Q+H K G + ALI++Y K
Sbjct: 99 LLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFD 158
Query: 354 NVDKARSVFDVLTELDLVSVNSMIYAYAQNG------------------------FGY-- 387
++ A VFD + E D++S NS++ YA+ G GY
Sbjct: 159 DLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTG 218
Query: 388 -----EALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTRE 442
EA+ F+ ++ G+ P+ ++ IS+L +C G +E G + + + ++ T
Sbjct: 219 IGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTG- 277
Query: 443 HFTC--MIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNAC----RIHGEIEMAEKIMR 496
C +I++ + +A L ++ DV+ W T+++ HG IE ++ R
Sbjct: 278 --VCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR 335
Query: 497 KVLQLAPGDGGTHILLTNLYASAGKWNQ 524
++ P +G T + L + + G W +
Sbjct: 336 A--KVKP-NGITFLGLLSACSHVGMWQE 360
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 256/494 (51%), Gaps = 3/494 (0%)
Query: 54 ARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSE 113
ARKLFD PER + WNS+I A+ + + L+ +L PD +T++ + + FSE
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 114 LGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTA 173
+ R HG+A+V GL D SA+V Y+K + +A +F + + D+ L+
Sbjct: 119 SFDTKGLRCIHGIAIVSGLG-FDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 174 LIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
+I GY G + + +F M R +PN YT+ + + + + +H F +K
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFR 293
L+S +L+ MYSRC + + VFN ++ V +S + G + G + A+ +F
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 294 EMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
E+ P+ ++ +L +C+ + G+++H+ +LG+E + +ALI++Y KCG
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 354 NVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
+ A S+F + E ++VS NS+I +GF A + F I ++GL P+ +TF ++L
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLC 417
Query: 414 ACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNP-DV 472
C ++GL+ +G ++F MK+ IE EH+ M+ L+G + + EEA + + P D
Sbjct: 418 TCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDS 477
Query: 473 VLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTH-ILLTNLYASAGKWNQVIEMKTT 531
+ LL+ C +H +AE + + + + ++L+N+YA G+W++V ++
Sbjct: 478 GILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDG 537
Query: 532 IRDLKLKKSPARSW 545
I + K P SW
Sbjct: 538 ISESYGGKLPGISW 551
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 175/341 (51%), Gaps = 3/341 (0%)
Query: 20 LRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVS 78
LR +H I SG + + G ++ Y K G + EA KLF +P+ + WN MI +
Sbjct: 125 LRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGC 184
Query: 79 HGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVF 138
G + + L+ M G P+ YT A+ + L+ H + + L+ +
Sbjct: 185 CGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDS-HSY 243
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR 198
V ALV+MY++ + A VF+ + E D+V ++LI GY++ G EAL +F E+
Sbjct: 244 VGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSG 303
Query: 199 VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSV 258
KP+ +A L SC L DSV+G+ +H ++++ GLE + ++L+ MYS+C +++ ++
Sbjct: 304 KKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAM 363
Query: 259 KVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRA 318
+F + + V++ S ++GL +G A F E++ + P+ T S++L C
Sbjct: 364 SLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSG 423
Query: 319 MREVGEQI-HAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ G++I + ++ G+E + ++ L G G +++A
Sbjct: 424 LLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEA 464
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 173/367 (47%), Gaps = 1/367 (0%)
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
D + A+ L YA D + A +FD E+ V L+ ++I YA++ L +F +++
Sbjct: 39 DPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQIL 98
Query: 196 DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE 255
+P+ +T A D+ + IHG + SGL ++++ YS+ ++
Sbjct: 99 RSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIV 158
Query: 256 DSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS 315
++ K+F + W ++G G + +++F M PN +T+ ++
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI 218
Query: 316 SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNS 375
++ V +HA K+ ++ + G AL+N+Y +C + A SVF+ ++E DLV+ +S
Sbjct: 219 DPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSS 278
Query: 376 MIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
+I Y++ G EAL LF ++ G P+ V +L +C G ++ +++
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVI-RL 337
Query: 436 NIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIM 495
+EL + + +ID+ + + A L + ++V + +L+ +HG A +
Sbjct: 338 GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKF 397
Query: 496 RKVLQLA 502
++L++
Sbjct: 398 TEILEMG 404
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 22/280 (7%)
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
+N Q +H F+ KS L T L Y+ + + K+F+ S W S +
Sbjct: 22 LNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAY 81
Query: 280 VQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQ-----IHAITTKLG 334
+ + +S+F +++R P+ FT AC +R E + IH I G
Sbjct: 82 AKAHQFTTVLSLFSQILRSDTRPDNFT-----YACLARGFSESFDTKGLRCIHGIAIVSG 136
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFK 394
+ ++ G+A++ Y K G + +A +F + + DL N MI Y GF + + LF
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN 196
Query: 395 RIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIEL---TREHFTC-MIDL 450
++ G PN T +++ +GL++ L A+ + +++ + + C ++++
Sbjct: 197 LMQHRGHQPNCYTMVAL-----TSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNM 251
Query: 451 LGRSKRFEEAAMLINEVTNPDVVLWRTLLNA---CRIHGE 487
R A + N ++ PD+V +L+ C H E
Sbjct: 252 YSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKE 291
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERH 65
++ CA + + VH++VI G + + LID Y KCG + A LF +PE++
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
IV++NS+I HG + A E + +L G++PD TFSA+ GL+ G+
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQE 430
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 292/581 (50%), Gaps = 44/581 (7%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ L+ CA + R +HA V+ +GF L+ Y+K V +A K+ DEMP
Sbjct: 34 FPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMP 93
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER I + N+ +S + +G + A ++G+ V G ++ T +++ G + G +
Sbjct: 94 ERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG---CGDIEGGMQ 150
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H LA+ G E ++V+V ++LV MY++ + A +F++V K VV + A I+G ++G
Sbjct: 151 LHCLAMKSGFE-MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 183 LDGEALEVFREMVD-RRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
+ VF M +PN+ T + + +C +L + G+ +HG ++K +
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASH-VTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
T+L+ MYS+C + + VF +L + ++W S + G++ NG+ E AV +F ++ +
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 301 SPNPFT-----------------------------------LSSILQACSSRAMREVGEQ 325
P+ T L+S+L ACS + G++
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL--TELDLVSVNSMIYAYAQN 383
IH K E + +LI++Y KCG AR +FD D V N MI Y ++
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 384 GFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREH 443
G A+++F+ +++ + P+ TF ++L AC++ G VE+G Q+F M+ + + + EH
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEH 509
Query: 444 FTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAP 503
CMIDLLGRS R EA +I++++ P ++ +LL +CR H + + E+ K+ +L P
Sbjct: 510 IGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEP 569
Query: 504 GDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARS 544
+ ++L+++YA+ +W V ++ I +L K P S
Sbjct: 570 ENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 231/509 (45%), Gaps = 43/509 (8%)
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
P+ +TF + K+ ++LG V GR H V G V DVF A+ALV MY K ++ DA
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFV-DVFTATALVSMYMKVKQVTDALK 87
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKP---NEYTLASTLASCGN 215
V D + E+ + A ++G ++G +A FR D RV N T+AS L CG
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDA---FRMFGDARVSGSGMNSVTVASVLGGCG- 143
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
D G +H +KSG E V TSL++MYSRC + ++F ++ + S VT+ +F
Sbjct: 144 --DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 276 VVGLVQNGREEVAVSVFREMIR-CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG 334
+ GL++NG + SVF M + S PN T + + AC+S + G Q+H + K
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL-DLVSVNSMIYAYAQNGFGYEALQLF 393
+ G ALI++Y KC A VF L + +L+S NS+I NG A++LF
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 394 KRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
+++ GL P+ T+ S++ + G V E + F M + + C+ LL
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV----PSLKCLTSLLSA 377
Query: 454 SKRF-------EEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDG 506
E +I D+ + +L++ G A +I + + P D
Sbjct: 378 CSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDR-FEPKPKDP 436
Query: 507 GTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSH---- 562
++ + Y G+ IE+ +R+ K++ S A T + SH
Sbjct: 437 VFWNVMISGYGKHGECESAIEIFELLREEKVEPSLA---------TFTAVLSACSHCGNV 487
Query: 563 PRAHEIFDMLHELIEKAKTLGYSPDTRFV 591
+ +IF ++ E GY P T +
Sbjct: 488 EKGSQIFRLMQE------EYGYKPSTEHI 510
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
SPN FT +L++C+ G +HA K G + AL+++Y K V A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 361 VFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGL 420
V D + E + SVN+ + +NGF +A ++F + G N VT S+L C G
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GD 144
Query: 421 VEEGCQLFAF-MKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
+E G QL MK+ +E+ T ++ + R + AA + +V + VV + +
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVG--TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 480 NACRIHGEIEMAEKI---MRKVLQLAPGD 505
+ +G + + + MRK P D
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPND 231
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 257/493 (52%), Gaps = 12/493 (2%)
Query: 57 LFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL-PDAYTFSAIFKAFSELG 115
+F+ +P WN +I + + + V + M+ G+ PD YTF + K S G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 116 LVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALI 175
VR G HGL + +G + DV V ++ VD Y K + A VF + E++ V +TAL+
Sbjct: 125 QVRVGSSVHGLVLRIGFDK-DVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 176 AGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE 235
Y +SG EA +F M +R + + + S GD VN + + + K +
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKS----GDLVNAKKLFDEMPKRDII 239
Query: 236 SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM 295
S+ TS++ Y++ + + +F + W++ ++G QNG+ A VF EM
Sbjct: 240 SY----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 296 IRCSVSPNPFTLSSILQACSSRAMREVGEQIHA-ITTKLGMEGNKDAGAALINLYGKCGN 354
+V P+ F + ++ ACS E+ E++ + + ++ + ALI++ KCG+
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH 355
Query: 355 VDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
+D+A +F+ + + DLVS SM+ A +G G EA++LF+++ G+ P+ V F IL
Sbjct: 356 MDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKV 415
Query: 415 CNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVV 473
C + LVEEG + F M+ ++I + +H++C+++LL R+ + +EA LI +
Sbjct: 416 CGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHAS 475
Query: 474 LWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIR 533
W +LL C +HG E+AE + R + +L P G+++LL+N+YA+ +W V ++ +
Sbjct: 476 AWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMN 535
Query: 534 DLKLKKSPARSWV 546
+ + K RSW+
Sbjct: 536 ENGITKICGRSWI 548
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 243/461 (52%), Gaps = 39/461 (8%)
Query: 151 DKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
D +R+AH VFD + E DV+ TA+I + + EA + F+ ++ ++PNE+T + +
Sbjct: 41 DLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVI 100
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLES--FVASQ--------------------------- 241
S D G+ +H + +K GL S FV S
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 242 --TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
T+L++ Y + E+++ +F + S VTW + + G Q GR E AV+ F +M+R
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 300 VS-PNPFTLSSILQACSSRAMREVGEQIHAITTK-LGMEGNKDAGAALINLYGKCGNVDK 357
V PN T + A S+ A G+ IHA K LG N +LI+ Y KCGN++
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 358 ARSVFDVLTE--LDLVSVNSMIYAYAQNGFGYEALQLFKR-IKKLGLAPNGVTFISILLA 414
+ F+ L E ++VS NSMI+ YA NG G EA+ +F++ +K L PN VT + +L A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 415 CNNAGLVEEGCQLFAFMKNNHNIE--LTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPD 471
CN+AGL++EG F N+++ L EH+ CM+D+L RS RF+EA LI + +P
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 472 VVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTT 531
+ W+ LL C+IH +A+ K+L+L P D ++++L+N Y++ W V ++
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 532 IRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
+++ LK+ SW++V ++ F+ D ++ E++ ML
Sbjct: 461 MKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLP 99
LI GY+K EA LF MPER +VTWN++I G++++AV + +ML EG V+P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
+ TF A S + G+ H A+ + +VFV ++L+ Y+K M D+ L
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 160 FDRVLE--KDVVLFTALIAGYAQSGLDGEALEVFREMV-DRRVKPNEYTLASTLASCGNL 216
F+++ E +++V + ++I GYA +G EA+ +F +MV D ++PN T+ L +C +
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344
Query: 217 G 217
G
Sbjct: 345 G 345
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 258/492 (52%), Gaps = 38/492 (7%)
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA- 179
+++H ++ GL ++ VA ++ + +R A+ VF + L +I +
Sbjct: 32 KQSHCYMIITGLNRDNLNVAK-FIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSL 90
Query: 180 --QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF 237
+ A+ V+R++ KP+ +T L + D G+ IHG +V G +S
Sbjct: 91 LDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSS 150
Query: 238 VASQTSLLTMYSRCSMVEDSVKVFNQL-------------AYA----------------- 267
V T L+ MY C + D+ K+F+++ Y
Sbjct: 151 VHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC 210
Query: 268 ---SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGE 324
+ V+WT + G ++GR A+ VF+ M+ +V P+ TL ++L AC+ E+GE
Sbjct: 211 WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 325 QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNG 384
+I + GM A+I++Y K GN+ KA VF+ + E ++V+ ++I A +G
Sbjct: 271 RICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 385 FGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF 444
G EAL +F R+ K G+ PN VTFI+IL AC++ G V+ G +LF M++ + I EH+
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 445 TCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAP 503
CMIDLLGR+ + EA +I + + +W +LL A +H ++E+ E+ + ++++L P
Sbjct: 391 GCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEP 450
Query: 504 GDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHP 563
+ G ++LL NLY++ G+W++ M+ ++ + +KK S ++V+ V+ F++GD++HP
Sbjct: 451 NNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHP 510
Query: 564 RAHEIFDMLHEL 575
+ I ++L E+
Sbjct: 511 QVERIHEILQEM 522
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 185/388 (47%), Gaps = 39/388 (10%)
Query: 13 HTKSLTTLRAVHAHVISSGFSYCLLG-HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNS 71
H +L TL+ H ++I +G + L K I+ G + A +F P + N+
Sbjct: 24 HGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNT 83
Query: 72 MISAHVSHGKSKQ---AVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
MI A + A+ +Y + PD +TF + K + V +GR+ HG V
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV 143
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIA------------ 176
V G + V V + L+ MY + DA +FD +L KDV ++ AL+A
Sbjct: 144 VFGFDS-SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 177 ---------------------GYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
GYA+SG EA+EVF+ M+ V+P+E TL + L++C +
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
LG G+ I ++ G+ V+ +++ MY++ + ++ VF + + VTWT+
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLG 334
+ GL +G A+++F M++ V PN T +IL ACS ++G+++ +++ +K G
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVF 362
+ N + +I+L G+ G + +A V
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVI 410
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 137/267 (51%), Gaps = 7/267 (2%)
Query: 41 LIDGYIKCGSVAEARKLFDEMP--ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL 98
L+ GY K G + EAR L + MP R+ V+W +IS + G++ +A+E++ ML+E V
Sbjct: 188 LLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVE 247
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
PD T A+ A ++LG + G R G+ V + +A++DMYAK + A
Sbjct: 248 PDEVTLLAVLSACADLGSLELGERICSYVDHRGMN-RAVSLNNAVIDMYAKSGNITKALD 306
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG- 217
VF+ V E++VV +T +IAG A G EAL +F MV V+PN+ T + L++C ++G
Sbjct: 307 VFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGW 366
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY-ASHVTWTSFV 276
+ +L + K G+ + ++ + R + ++ +V + + A+ W S +
Sbjct: 367 VDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL 426
Query: 277 VGLVQNGREEVAVSVFREMIRCSVSPN 303
+ E+ E+I+ + PN
Sbjct: 427 AASNVHHDLELGERALSELIK--LEPN 451
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPER 64
++++ CA SL + ++V G + + L + +ID Y K G++ +A +F+ + ER
Sbjct: 255 AVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER 314
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA- 123
++VTW ++I+ +HG +A+ ++ M+ GV P+ TF AI A S +G V G+R
Sbjct: 315 NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLF 374
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV-LEKDVVLFTALIAG 177
+ + G+ ++ ++D+ + K+R+A V + + + ++ +L+A
Sbjct: 375 NSMRSKYGIHP-NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 215/383 (56%), Gaps = 3/383 (0%)
Query: 202 NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF 261
+ Y L+S + SCG D G H +K G S V +SL+ +Y VE++ KVF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 262 NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
++ + V+WT+ + G Q R ++ + ++ +M + + PN +T +++L AC+
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 322 VGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYA 381
G +H T +G++ +LI++Y KCG++ A +FD + D+VS NSMI YA
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 382 QNGFGYEALQLFK-RIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELT 440
Q+G +A++LF+ + K G P+ +T++ +L +C +AGLV+EG + F M H ++
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPE 357
Query: 441 REHFTCMIDLLGRSKRFEEAAMLI-NEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVL 499
H++C++DLLGR +EA LI N P+ V+W +LL +CR+HG++ + + L
Sbjct: 358 LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL 417
Query: 500 QLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGD 559
L P TH+ L NLYAS G W + ++ ++D LK +P SW++++ V F A D
Sbjct: 418 MLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAED 477
Query: 560 MSHPRAHEIFDMLHELIEKAKTL 582
S+ R EI +LH LI+ + L
Sbjct: 478 GSNCRMLEIVHVLHCLIDHMEFL 500
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 142/275 (51%), Gaps = 4/275 (1%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
SS + C + T H + GF S LG L+ Y G V A K+F+EMPE
Sbjct: 124 SSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPE 183
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
R++V+W +MIS + ++LY M P+ YTF+A+ A + G + GR
Sbjct: 184 RNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSV 243
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
H + +GL+ + ++++L+ MY K ++DA +FD+ KDVV + ++IAGYAQ GL
Sbjct: 244 HCQTLHMGLKSY-LHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGL 302
Query: 184 DGEALEVFREMVDRR-VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
+A+E+F M+ + KP+ T L+SC + G G+ + + GL+ + +
Sbjct: 303 AMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYS 362
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASH-VTWTSFV 276
L+ + R ++++++++ + + V W S +
Sbjct: 363 CLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 158/326 (48%), Gaps = 36/326 (11%)
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
DAY S+ ++ R G H LA+ G + DV++ S+LV +Y ++ +A+ V
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGF-ISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
F+ + E++VV +TA+I+G+AQ L+++ +M PN+YT + L++C G
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
G+ +H + GL+S++ SL++MY +C ++D+ ++F+Q + V+W S + G
Sbjct: 238 GQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 280 VQNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGN 338
Q+G A+ +F M+ + P+ T +L +C + + G + + + G++
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPE 357
Query: 339 KDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK 398
+ + L++L G+ G + EAL+L I+
Sbjct: 358 LNHYSCLVDLLGRFGLLQ-------------------------------EALEL---IEN 383
Query: 399 LGLAPNGVTFISILLACNNAGLVEEG 424
+ + PN V + S+L +C G V G
Sbjct: 384 MPMKPNSVIWGSLLFSCRVHGDVWTG 409
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 272/520 (52%), Gaps = 39/520 (7%)
Query: 69 WNSMISAHVSHGK-SKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLA 127
WN++I +H SHGK +QA+ L ML GV D ++ S + KA S LG V+ G + HG
Sbjct: 89 WNAVIKSH-SHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 128 VVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEA 187
GL D+F+ + L+ +Y K + + +FDR+ ++D V + ++I GY + GL A
Sbjct: 148 KKTGLWS-DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSA 206
Query: 188 LEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN-----------------GQLIHGFIV 230
E+F +++ +K N + S ++ D V+ +I G++
Sbjct: 207 RELF-DLMPMEMK-NLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVK 264
Query: 231 KSGLESF-----------VASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
+E V + +++ Y++ V + +F+Q+ + V + S + G
Sbjct: 265 HGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGY 324
Query: 280 VQNGREEVAVSVFREMIRCS-VSPNPFTLSSILQACSS--RAMREVGEQIHAITTKLGME 336
VQN A+ +F +M + S + P+ TL +L A + R + + ++ + + +
Sbjct: 325 VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLG 384
Query: 337 GNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRI 396
G G ALI++Y KCG++ A VF+ + + N+MI A +G G A + +I
Sbjct: 385 GK--LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQI 442
Query: 397 KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKR 456
++L L P+ +TF+ +L AC+++GLV+EG F M+ H IE +H+ CM+D+L RS
Sbjct: 443 ERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGS 502
Query: 457 FEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNL 515
E A LI E+ P+ V+WRT L AC H E E E + + ++ A + +++LL+N+
Sbjct: 503 IELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNM 562
Query: 516 YASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTF 555
YAS G W V ++T +++ K++K P SW+++D VH F
Sbjct: 563 YASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 178/377 (47%), Gaps = 44/377 (11%)
Query: 23 VHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGK 81
+H + +G +S L + LI Y+KCG + +R++FD MP+R V++NSMI +V G
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 82 SKQAVELYG------------NMLVEGVLPDAYTFSAIFKAFSEL-------------GL 116
A EL+ N ++ G + K F+++ G
Sbjct: 203 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGY 262
Query: 117 VRYGR--RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTAL 174
V++GR A GL V+ DV + ++D YAK + A +FD++ +DVV + ++
Sbjct: 263 VKHGRIEDAKGLFDVMPRR--DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSM 320
Query: 175 IAGYAQSGLDGEALEVFREM-VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
+AGY Q+ EALE+F +M + + P++ TL L + LG +H +IV+
Sbjct: 321 MAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQ 380
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFR 293
+L+ MYS+C ++ ++ VF + S W + + GL +G E A +
Sbjct: 381 FYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLL 440
Query: 294 EMIRCSVSPNPFTLSSILQACSSRAMREVG-------EQIHAITTKLGMEGNKDAGAALI 346
++ R S+ P+ T +L ACS + + G + H I +L G ++
Sbjct: 441 QIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG------CMV 494
Query: 347 NLYGKCGNVDKARSVFD 363
++ + G+++ A+++ +
Sbjct: 495 DILSRSGSIELAKNLIE 511
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 148/328 (45%), Gaps = 36/328 (10%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLP 99
+IDGY K G V A+ LFD+MP R +V +NSM++ +V + +A+E++ +M E +LP
Sbjct: 289 MIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLP 348
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
D T + A ++LG + H L +V L + AL+DMY+K ++ A LV
Sbjct: 349 DDTTLVIVLPAIAQLGRLSKAIDMH-LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLV 407
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
F+ + K + + A+I G A GL A ++ ++ +KP++ T L +C
Sbjct: 408 FEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACS----- 462
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
H +VK GL F + R +E ++ + + V L
Sbjct: 463 ------HSGLVKEGLLCF--------ELMRRKHKIEPRLQHYGCM-----------VDIL 497
Query: 280 VQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNK 339
++G E+A ++ EM V PN + L ACS E GE + A L N
Sbjct: 498 SRSGSIELAKNLIEEM---PVEPNDVIWRTFLTACSHHKEFETGELV-AKHLILQAGYNP 553
Query: 340 DAGAALINLYGKCGNVDKARSVFDVLTE 367
+ L N+Y G R V ++ E
Sbjct: 554 SSYVLLSNMYASFGMWKDVRRVRTMMKE 581
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 168/370 (45%), Gaps = 32/370 (8%)
Query: 166 KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLI 225
+D L+ A+I ++ +AL + M++ V ++++L+ L +C LG G I
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 226 HGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGRE 285
HGF+ K+GL S + Q L+ +Y +C + S ++F+++ V++ S + G V+ G
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 286 EVAVSVF-------REMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGN 338
A +F + +I + + + +S +S+ ++ E+ I+ ++G
Sbjct: 204 VSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK-DLISWNSMIDGY 262
Query: 339 KDAG--------------------AALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
G A +I+ Y K G V A+++FD + D+V+ NSM+
Sbjct: 263 VKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 322
Query: 379 AYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
Y QN + EAL++F ++K L P+ T + +L A G + + + ++
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK-QF 381
Query: 438 ELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRK 497
L + +ID+ + + A ++ + N + W ++ IHG E A ++ +
Sbjct: 382 YLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 441
Query: 498 V--LQLAPGD 505
+ L L P D
Sbjct: 442 IERLSLKPDD 451
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 27/295 (9%)
Query: 203 EYTLASTLASCGNLGDSVNGQLIHGFIVKSGL-----------ESFVASQTSLLTMYSRC 251
E +++ST+ G+ S + IHG ++K+G+ +F +S+ L ++RC
Sbjct: 9 ECSISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARC 68
Query: 252 SMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSIL 311
E V F+ W + + A+ + M+ VS + F+LS +L
Sbjct: 69 VFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVL 128
Query: 312 QACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLV 371
+ACS + G QIH K G+ + LI LY KCG + +R +FD + + D V
Sbjct: 129 KACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSV 188
Query: 372 SVNSMIYAYAQNGFGYEALQLFKRIKKLGLAP----NGVTFISILLA-CNNAGLVEEGCQ 426
S NSMI Y + G A +LF L P N +++ S++ + V+ +
Sbjct: 189 SYNSMIDGYVKCGLIVSARELFD------LMPMEMKNLISWNSMISGYAQTSDGVDIASK 242
Query: 427 LFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
LFA M I + MID + R E+A L + + DVV W T+++
Sbjct: 243 LFADMPEKDLIS-----WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDG 292
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 245/484 (50%), Gaps = 43/484 (8%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL 98
+ LI Y KCG+ A ++F + IV+WN++I A +A++L+ +M G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
P+ T+ ++ S + L+ GR+ HG+ + G E + + +AL+D YAK + D+ L
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET-GIVLGNALIDFYAKCGNLEDSRL 372
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGE-ALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
FD + +K++V + AL++GYA DG L +F +M+ +P EYT ++ L SC
Sbjct: 373 CFDYIRDKNIVCWNALLSGYANK--DGPICLSLFLQMLQMGFRPTEYTFSTALKSCC--- 427
Query: 218 DSVNGQLIHGFIVKSGLE-----------SFVASQ---------------TSLLTM---- 247
Q +H IV+ G E S+ +Q TS++ +
Sbjct: 428 -VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVA 486
Query: 248 --YSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
YSR +SVK+ + L V+W + ++ E + +F+ M++ ++ P+ +
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKY 546
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGME-GNKDAGAALINLYGKCGNVDKARSVFDV 364
T SIL CS +G IH + TK + LI++YGKCG++ VF+
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEE 606
Query: 365 LTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEG 424
E +L++ ++I +G+G EAL+ FK LG P+ V+FISIL AC + G+V+EG
Sbjct: 607 TREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666
Query: 425 CQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNP-DVVLWRTLLNACR 483
LF MK ++ +E +H+ C +DLL R+ +EA LI E+ P D +WRT L+ C
Sbjct: 667 MGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Query: 484 IHGE 487
E
Sbjct: 726 RFAE 729
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 232/525 (44%), Gaps = 33/525 (6%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVI---SSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
SL+ C S +A+HA I S + + +I Y K G V+ A K+FD+MP
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER+ V++N++I + +G +A ++ M G LP+ T S + S VR G +
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAGTQ 134
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
HGL++ GL + D FV + L+ +Y + D + A VF+ + K + + +++ G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQT 242
E + FRE+V E + L + D + +H K GL+ ++
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Query: 243 SLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
SL++ Y +C + ++F V+W + + ++ A+ +F M SP
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP 314
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
N T S+L S + G QIH + K G E G ALI+ Y KCGN++ +R F
Sbjct: 315 NQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCF 374
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN------ 416
D + + ++V N+++ YA N G L LF ++ ++G P TF + L +C
Sbjct: 375 DYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQ 433
Query: 417 ------NAGLVEEGCQLFAFMKNNHNIELTREHF---------TCMIDL------LGRSK 455
G + L + M++ +L + T ++ L R
Sbjct: 434 LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRG 493
Query: 456 RFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
++ E+ LI+ + PD V W + AC E ++ + +LQ
Sbjct: 494 QYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 215/489 (43%), Gaps = 54/489 (11%)
Query: 54 ARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSE 113
A ++F++MP + + TWN M+S G K+ + + ++ G +F + K S
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 114 LGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTA 173
+ + ++ H A GL+ ++ V ++L+ Y K A +F D+V + A
Sbjct: 228 VKDLDISKQLHCSATKKGLDC-EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 174 LIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
+I A+S +AL++F M + PN+ T S L + G+ IHG ++K+G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFR 293
E+ + +L+ Y++C +EDS F+ + + V W + + G N + +S+F
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFL 405
Query: 294 EMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALI------- 346
+M++ P +T S+ L++C + +Q+H++ ++G E N ++L+
Sbjct: 406 QMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQ 461
Query: 347 -------------------------NLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYA 381
+Y + G ++ + L + D VS N I A +
Sbjct: 462 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACS 521
Query: 382 QNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTR 441
++ + E ++LFK + + + P+ TF+SIL C+ + G + +T+
Sbjct: 522 RSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGL--------ITK 573
Query: 442 EHFTC--------MIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEK 493
F+C +ID+ G+ + E +++ W L++ IHG + A +
Sbjct: 574 TDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALE 633
Query: 494 IMRKVLQLA 502
++ L L
Sbjct: 634 KFKETLSLG 642
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 114/243 (46%), Gaps = 1/243 (0%)
Query: 45 YIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTF 104
Y + G E+ KL + + V+WN I+A ++ +EL+ +ML + PD YTF
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 105 SAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVL 164
+I S+L + G HGL D FV + L+DMY K +R VF+
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 608
Query: 165 EKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQL 224
EK+++ +TALI+ G EALE F+E + KP+ + S L +C + G G
Sbjct: 609 EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMG 668
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY-ASHVTWTSFVVGLVQNG 283
+ + G+E + + + +R ++++ + ++ + A W +F+ G +
Sbjct: 669 LFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFA 728
Query: 284 REE 286
E+
Sbjct: 729 EEQ 731
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/568 (29%), Positives = 269/568 (47%), Gaps = 78/568 (13%)
Query: 17 LTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAH 76
+ ++ +HAH + +G L+ + ++ ARKLFD +N +I A+
Sbjct: 1 MNGIKQLHAHCLRTGVDET---KDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAY 57
Query: 77 VSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLD 136
H + +++ LY + +G+ P +TF+ IF A + R R H
Sbjct: 58 YVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLH------------ 105
Query: 137 VFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVD 196
++F F E D T LI YA+ G A VF EM
Sbjct: 106 -----------SQF---------FRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK 145
Query: 197 RRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED 256
R V +++T Y R ++
Sbjct: 146 RDV---------------------------------------PVWNAMITGYQRRGDMKA 166
Query: 257 SVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR-CSVSPNPFTLSSILQACS 315
++++F+ + + +WT+ + G QNG A+ +F M + SV PN T+ S+L AC+
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 226
Query: 316 SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL-TELDLVSVN 374
+ E+G ++ + G N A I +Y KCG +D A+ +F+ L + +L S N
Sbjct: 227 NLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWN 286
Query: 375 SMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN 434
SMI + A +G EAL LF ++ + G P+ VTF+ +LLAC + G+V +G +LF M+
Sbjct: 287 SMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEV 346
Query: 435 HNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEK 493
H I EH+ CMIDLLGR + +EA LI + PD V+W TLL AC HG +E+AE
Sbjct: 347 HKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEI 406
Query: 494 IMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSW-VDVDREV 552
+ +L P + G ++++N+YA+ KW+ V+ M+ ++ + K+ S+ V+V +V
Sbjct: 407 ASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDV 466
Query: 553 HTFMAGDMSHPRAHEIFDMLHELIEKAK 580
H F D SHPR++EI+ +L E+ + K
Sbjct: 467 HKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/537 (28%), Positives = 258/537 (48%), Gaps = 33/537 (6%)
Query: 21 RAVHAHVISSGFSYCLLG--HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVS 78
RAVH + + L + +ID Y KCG +A LF R +V+WNSMISA
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQ 472
Query: 79 HGKSKQAVELYGNMLVEGVLP--DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLD 136
+G + +A L+ ++ E T AI + + +G+ H LG
Sbjct: 473 NGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG----- 527
Query: 137 VFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV- 195
L + + + M + +D+ + ++I+G A SG E+L F+ M
Sbjct: 528 -----DLTSAFLRLETMSET---------RDLTSWNSVISGCASSGHHLESLRAFQAMSR 573
Query: 196 DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE 255
+ +++ + TL T+++ GNLG + G+ HG +KS E Q +L+TMY RC +E
Sbjct: 574 EGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIE 633
Query: 256 DSVKVFNQLAYASHVTWTSFVVGLVQN--GREEVAVSVFREMIRCSVSPNPFTLSSILQA 313
+VKVF ++ + +W + L QN GRE VF+ + PN T +L A
Sbjct: 634 SAVKVFGLISDPNLCSWNCVISALSQNKAGRE-----VFQLFRNLKLEPNEITFVGLLSA 688
Query: 314 CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSV 373
+ G Q H + G + N AAL+++Y CG ++ VF + +
Sbjct: 689 STQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAW 748
Query: 374 NSMIYAYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISILLACNNAGLVEEGCQLFAFMK 432
NS+I A+ +G G +A++LFK + + PN +FIS+L AC+++G ++EG + M+
Sbjct: 749 NSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQME 808
Query: 433 NNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVV-LWRTLLNACRIHGEIEMA 491
++ EH ++D+LGR+ + EA I + P +W LL+AC HG+ ++
Sbjct: 809 EKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLG 868
Query: 492 EKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDV 548
+++ + ++ P + +I L N Y G W + + ++ + D LKK P S +DV
Sbjct: 869 KEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 211/411 (51%), Gaps = 16/411 (3%)
Query: 19 TLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHV 77
T R+VH + G L KL+ Y + G + + LFDE+ E+ ++ WNSMI+A
Sbjct: 105 TPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALN 164
Query: 78 SHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDV 137
+G+ AV L+ M+ +G D+ T A S L L R H LA+ GL V D
Sbjct: 165 QNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGL-VGDS 223
Query: 138 FVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR 197
+ +AL+++YAK + + A VF + +D+V + ++ +G ++L+ F+ M
Sbjct: 224 SLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS 283
Query: 198 RVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL--ESFVASQTSLLTMYSRCSMVE 255
+ + T + +++C ++ + G+ +HG ++KSG E+ V+ S+++MYS+C E
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 256 DSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS-VSPNPFTLSSILQAC 314
+ VF +L ++ + + G NG E A + +M + P+ T+ SI C
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 315 SSRAMREVGEQIHAITTKLGMEGNK-DAGAALINLYGKCGNVDKARSVFDVLTELDLVSV 373
+ G +H T ++ M+ + ++I++YGKCG +A +F T DLVS
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSW 463
Query: 374 NSMIYAYAQNGFGYEALQLFKRI------KKLGLAPNGVTFISILLACNNA 418
NSMI A++QNGF ++A LFK + K L+ T ++IL +C+++
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS----TVLAILTSCDSS 510
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/514 (24%), Positives = 237/514 (46%), Gaps = 48/514 (9%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFS---YCLLGHKLIDGYIKCGSVAEARKLFDE 60
+S +I+ C+ + LT ++H VI SG+S + +G+ +I Y KCG A +F+E
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEE 351
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNML-VEGVLPDAYTFSAIFKAFSELGLVRY 119
+ R +++ N++++ ++G ++A + M V+ + PD T +I +L R
Sbjct: 352 LVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSRE 411
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
GR HG V + ++ + V ++++DMY K A L+F +D+V + ++I+ ++
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLA---SCGNLGDSVNGQLIHGFIVKSGLES 236
Q+G +A +F+E+V ++++L++ LA SC + + G+ +H ++ K G
Sbjct: 472 QNGFTHKAKNLFKEVVS-EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG--- 527
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI 296
L + + R + ++ + +W S + G +G ++ F+ M
Sbjct: 528 ------DLTSAFLRLETMSETRDL---------TSWNSVISGCASSGHHLESLRAFQAMS 572
Query: 297 R-CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNV 355
R + + TL + A + + G H + K E + LI +YG+C ++
Sbjct: 573 REGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDI 632
Query: 356 DKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLAC 415
+ A VF ++++ +L S N +I A +QN G E QLF+ +K L PN +TF+ +L A
Sbjct: 633 ESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSAS 689
Query: 416 NNAGLVEEGCQLFAFMKNNHNIELTREHF-------TCMIDLLGRSKRFEEAAMLINEVT 468
G G Q + L R F ++D+ E +
Sbjct: 690 TQLGSTSYGMQA--------HCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSG 741
Query: 469 NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA 502
+ W ++++A HG M EK M +L+
Sbjct: 742 VNSISAWNSVISAHGFHG---MGEKAMELFKELS 772
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 204/447 (45%), Gaps = 32/447 (7%)
Query: 56 KLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELG 115
LFDE+PER T S M + VL ++F
Sbjct: 70 NLFDELPERENRTMESSF------------------MFLRDVL----------RSFMMRT 101
Query: 116 LVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALI 175
R H A+ GL + D+ +S L+ Y + ++ + +FD + EKDV+++ ++I
Sbjct: 102 ETETPRSVHCFALKCGL-LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMI 160
Query: 176 AGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE 235
Q+G A+ +F EM+ + + + TL ++ +L S ++H +++GL
Sbjct: 161 TALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLV 220
Query: 236 SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREM 295
+ +L+ +Y++ + + VF + + V+W + + + NG ++ F+ M
Sbjct: 221 GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM 280
Query: 296 IRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM--EGNKDAGAALINLYGKCG 353
+ T S ++ ACSS +GE +H + K G E + G ++I++Y KCG
Sbjct: 281 TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 354 NVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISIL 412
+ + A +VF+ L D++S N+++ +A NG EA + +++ + + P+ T +SI
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 413 LACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDV 472
C + EG + + E +ID+ G+ +A +L T+ D+
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDL 460
Query: 473 VLWRTLLNACRIHGEIEMAEKIMRKVL 499
V W ++++A +G A+ + ++V+
Sbjct: 461 VSWNSMISAFSQNGFTHKAKNLFKEVV 487
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 269/526 (51%), Gaps = 9/526 (1%)
Query: 23 VHAHVISSGFSYCLLGHKLIDGYIKCGSVAE-ARKLFDEMPERHIVTWNSMISAHVSHGK 81
VH VIS GF + + G C + + A KLFDEM +R++ N ++ G+
Sbjct: 134 VHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGE 193
Query: 82 SKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVAS 141
SK+ E+Y M +EGV + T+ + + S LV G++ H L V G + ++FVA+
Sbjct: 194 SKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVAN 253
Query: 142 ALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKP 201
LVD Y+ + + F+ V EKDV+ + ++++ A G ++L++F +M +P
Sbjct: 254 VLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRP 313
Query: 202 NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE-SFVASQTSLLTMYSRCSMVEDSVKV 260
+ S L C D +G+ IH +++K G + S + Q++L+ MY +C+ +E+S +
Sbjct: 314 SIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALL 373
Query: 261 FNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMR 320
+ L + S + L+ G + + +F MI + TLS++L+A S
Sbjct: 374 YQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPE 433
Query: 321 EVGE--QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIY 378
+ +H K G + +LI+ Y K G + +R VFD L ++ + S+I
Sbjct: 434 SLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIIN 493
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIE 438
YA+NG G + +++ + + ++ L P+ VT +S+L C+++GLVEEG +F +++ + I
Sbjct: 494 GYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGIS 553
Query: 439 LTREHFTCMIDLLGRSKRFEEAA-MLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRK 497
R+ + CM+DLLGR+ E+A +L+ + D V W +LL +CRIH + +
Sbjct: 554 PGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEV 613
Query: 498 VLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPAR 543
++ L P + +I ++ Y G + E+ IR++ + R
Sbjct: 614 LMNLEPENFAVYIQVSKFYFEIGDF----EISRQIREIAASRELMR 655
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 237/505 (46%), Gaps = 15/505 (2%)
Query: 11 CAHTKSLTTLRAVHAHVISSGFSYCLLGH-KLIDGYIKCGSVAEARKLFDEMPERHIVTW 69
C+ T + T R + + S + H + ID IK G++ A + FDEM R +VT+
Sbjct: 21 CSLTPFIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTY 80
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVV 129
N +IS + +G S +A+ELY M+ G+ A TF ++ S+ R G + H +
Sbjct: 81 NLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVIS 140
Query: 130 LGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALE 189
LG ++FV SALV +YA + A +FD +L++++ + L+ + Q+G E
Sbjct: 141 LGFGC-NMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFE 199
Query: 190 VFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE-SFVASQTSLLTMY 248
V+ M V N T + C + G+ +H +VKSG S + L+ Y
Sbjct: 200 VYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYY 259
Query: 249 SRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLS 308
S C + S++ FN + ++W S V G ++ +F +M P+
Sbjct: 260 SACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFM 319
Query: 309 SILQACSSRAMREVGEQIHAITTKLGME-GNKDAGAALINLYGKCGNVDKARSVFDVLTE 367
S L CS + + G+QIH K+G + + +ALI++YGKC ++ + ++ L
Sbjct: 320 SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPC 379
Query: 368 LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE--GC 425
L+L NS++ + G + +++F + G + VT ++L A + L E C
Sbjct: 380 LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKAL-SLSLPESLHSC 438
Query: 426 QLF--AFMKNNHNIELTREHFTC-MIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNAC 482
L +K+ + ++ +C +ID +S + E + + +E+ P++ +++N
Sbjct: 439 TLVHCCAIKSGYAADVA---VSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGY 495
Query: 483 RIHGEIEMAEKIMRKV--LQLAPGD 505
+G K++R++ + L P +
Sbjct: 496 ARNGMGTDCVKMLREMDRMNLIPDE 520
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 233/464 (50%), Gaps = 6/464 (1%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDE 60
N + S A + L T HA I +G F+ L L+D Y KCG V AR++FDE
Sbjct: 219 NVFKSFAGASALRQGLKT----HALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE-GVLPDAYTFSAIFKAFSELGLVRY 119
+ ER IV W +MI+ + + +A+ L+ M+ E + P++ + I ++ ++
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKL 334
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G+ H + V FV S L+D+Y K M VF +++ + +TAL++GYA
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
+G +AL M +P+ T+A+ L C L G+ IH + +K+ V+
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVS 454
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
TSL+ MYS+C + E +++F++L + WT+ + V+N + VFR M+
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR 359
P+ T+ +L CS ++G+++H K E A +I +YGKCG++ A
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 360 SVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
FD + ++ ++I AY N +A+ F+++ G PN TF ++L C+ AG
Sbjct: 575 FSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAML 463
V+E + F M +N++ + EH++ +I+LL R R EEA L
Sbjct: 635 FVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 226/432 (52%), Gaps = 12/432 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+S+L+ C KSL + VH H+ +G S L KL+ Y CGSV +A+K+FDE
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDEST 173
Query: 63 ERHIVTWNSMISAHVSHGKSK--QAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
++ +WN+++ V GK + + + M GV + Y+ S +FK+F+ +R G
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQ 180
+ H LA+ GL VF+ ++LVDMY K K+ A VFD ++E+D+V++ A+IAG A
Sbjct: 234 LKTHALAIKNGL-FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 181 SGLDGEALEVFREMV-DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG---LES 236
+ EAL +FR M+ + ++ PN L + L G++ G+ +H ++KS +
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI 296
FV S L+ +Y +C + +VF + ++WT+ + G NGR + A+ M
Sbjct: 353 FVHS--GLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ 410
Query: 297 RCSVSPNPFTLSSILQACSS-RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNV 355
+ P+ T++++L C+ RA+++ G++IH K N +L+ +Y KCG
Sbjct: 411 QEGFRPDVVTIATVLPVCAELRAIKQ-GKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVP 469
Query: 356 DKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLAC 415
+ +FD L + ++ + +MI Y +N +++F+ + P+ VT +L C
Sbjct: 470 EYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVC 529
Query: 416 NNAGLVEEGCQL 427
++ ++ G +L
Sbjct: 530 SDLKALKLGKEL 541
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 194/407 (47%), Gaps = 18/407 (4%)
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
G+ +A TFSA+ +A + +G++ H + GLE + F+ + LV MY ++D
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLES-NEFLRTKLVHMYTACGSVKD 164
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLD--GEALEVFREMVDRRVKPNEYTLASTLASC 213
A VFD +V + AL+ G SG + L F EM + V N Y+L++ S
Sbjct: 165 AQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSF 224
Query: 214 GNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWT 273
G H +K+GL + V +TSL+ MY +C V + +VF+++ V W
Sbjct: 225 AGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWG 284
Query: 274 SFVVGLVQNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHA--IT 330
+ + GL N R+ A+ +FR MI + PN L++IL ++G+++HA +
Sbjct: 285 AMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Query: 331 TKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEAL 390
+K +E + LI+LY KCG++ R VF + + +S +++ YA NG +AL
Sbjct: 345 SKNYVE-QPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQAL 403
Query: 391 QLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN---HNIELTREHFTCM 447
+ +++ G P+ VT ++L C +++G ++ + N N+ L T +
Sbjct: 404 RSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV----TSL 459
Query: 448 IDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA----CRIHGEIEM 490
+ + + E L + + +V W +++ C + IE+
Sbjct: 460 MVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEV 506
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 163/333 (48%), Gaps = 12/333 (3%)
Query: 163 VLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNG 222
++ +D+ +F Q+ L+ AL + + R + N T ++ L +C ++G
Sbjct: 78 IIHRDIQIFAR------QNNLE-VALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 223 QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQN 282
+ +H I +GLES +T L+ MY+ C V+D+ KVF++ ++ +W + + G V +
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 283 G--REEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
G R + +S F EM V N ++LS++ ++ + + G + HA+ K G+ +
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 250
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKR-IKKL 399
+L+++Y KCG V AR VFD + E D+V +MI A N +EAL LF+ I +
Sbjct: 251 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE 310
Query: 400 GLAPNGVTFISILLACNNAGLVEEGCQLFA-FMKNNHNIELTREHFTCMIDLLGRSKRFE 458
+ PN V +IL + ++ G ++ A +K+ + +E H + +IDL +
Sbjct: 311 KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVH-SGLIDLYCKCGDMA 369
Query: 459 EAAMLINEVTNPDVVLWRTLLNACRIHGEIEMA 491
+ + + W L++ +G + A
Sbjct: 370 SGRRVFYGSKQRNAISWTALMSGYAANGRFDQA 402
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 239/447 (53%), Gaps = 15/447 (3%)
Query: 98 LPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAH 157
L + F+++ + L + +G R H L L ++ ++S LV +YA AH
Sbjct: 89 LTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRN-NLGISSKLVRLYASCGYAEVAH 147
Query: 158 LVFDRVLEKDVVLF--TALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
VFDR+ ++D F +LI+GYA+ G +A+ ++ +M + VKP+ +T L +CG
Sbjct: 148 EVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
+G G+ IH +VK G V +L+ MY++C + + VF+ + + +V+W S
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
+ G + +G A+ +FR M++ + P+ +SS+L S G Q+H + GM
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGM 324
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKR 395
E ALI LY K G + +A +FD + E D VS N++I A+++N G L+ F++
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQ 381
Query: 396 IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSK 455
+ + P+G+TF+S+L C N G+VE+G +LF+ M + I+ EH+ CM++L GR+
Sbjct: 382 MHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAG 441
Query: 456 RFEEA-AMLINEV---TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHIL 511
EEA +M++ E+ P V W LL AC +HG ++ E +++ +L P + L
Sbjct: 442 MMEEAYSMIVQEMGLEAGPTV--WGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFEL 499
Query: 512 LTNLYASAGKWNQVIEMKTTIRDLKLK 538
L +Y+ A + V ++ + D L+
Sbjct: 500 LIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 226/466 (48%), Gaps = 58/466 (12%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLG--HKLIDGYIKCGSVAEARKLFDEM 61
++SL+ C +++ VH H+I LG KL+ Y CG A ++FD M
Sbjct: 95 FASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 62 PERH--IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
+R WNS+IS + G+ + A+ LY M +GV PD +TF + KA +G V+
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 120 GRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYA 179
G H V G DV+V +ALV MYAK + A VFD + KD V + +++ GY
Sbjct: 214 GEAIHRDLVKEGFG-YDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL 272
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVA 239
GL EAL++FR MV ++P++ ++S LA + +G+ +HG++++ G+E ++
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFK---HGRQLHGWVIRRGMEWELS 329
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
+L+ +YS+ + + +F+Q+ V+W + + +N + F +M R +
Sbjct: 330 VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRAN 386
Query: 300 VSPNPFTLSSILQACSSRAMREVGEQIHAITTK-LGMEGNKDAGAALINLYGKCGNVDKA 358
P+ T S+L C++ M E GE++ ++ +K G++ + A ++NLYG+ G +++A
Sbjct: 387 AKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Query: 359 RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLAC--- 415
S+ ++++GL + ++L AC
Sbjct: 447 YSMI---------------------------------VQEMGLEAGPTVWGALLYACYLH 473
Query: 416 NNAGLVEEGCQ-LFAFMKNN-HNIELTREHFTCMIDLLGRSKRFEE 459
N + E Q LF +N HN EL +I + ++KR E+
Sbjct: 474 GNTDIGEVAAQRLFELEPDNEHNFEL-------LIRIYSKAKRAED 512
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 233/444 (52%), Gaps = 37/444 (8%)
Query: 169 VLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNL--GDSVNGQLIH 226
V +T+ I ++G EA + F +M V+PN T + L+ CG+ G G L+H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 227 GFIVKSGLE-SFVASQTSLLTMYS-------------------------------RCSMV 254
G+ K GL+ + V T+++ MYS R V
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 255 EDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQAC 314
+++ K+F+++ ++WT+ + G V+ G +E A+ FREM V P+ + + L AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 315 SSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVN 374
++ G +H + N +LI+LY +CG V+ AR VF + + +VS N
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 375 SMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN 434
S+I +A NG +E+L F+++++ G P+ VTF L AC++ GLVEEG + F MK +
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 435 HNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHG-EIEMAE 492
+ I EH+ C++DL R+ R E+A L+ + P+ V+ +LL AC HG I +AE
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 493 KIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREV 552
++M+ + L +++L+N+YA+ GKW +M+ ++ L LKK P S +++D +
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
Query: 553 HTFMAGDMSHPRAHEIFDMLHELI 576
H FMAGD +H I ++L ELI
Sbjct: 457 HVFMAGDNAHVETTYIREVL-ELI 479
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 122/238 (51%), Gaps = 24/238 (10%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL 98
+ +IDGY++ G V A K+FD+MPER +++W +MI+ V G ++A+ + M + GV
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
PD A A + LG + +G H + + +V V+++L+D+Y + + A
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKN-NVRVSNSLIDLYCRCGCVEFARQ 262
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGD 218
VF + ++ VV + ++I G+A +G E+L FR+M ++ KP+ T L +C ++G
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG- 321
Query: 219 SVNGQLIHGFIVKSGLESF------------VASQTSLLTMYSRCSMVEDSVKVFNQL 264
+V+ GL F + L+ +YSR +ED++K+ +
Sbjct: 322 ----------LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 45/261 (17%)
Query: 258 VKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS-- 315
++ NQ + V+WTS + L +NGR A F +M V PN T ++L C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 316 SRAMREVGEQIHAITTKLGMEGNKD-AGAALINLYGKCGNVDKARSVFDV---------- 364
+ +G+ +H KLG++ N G A+I +Y K G KAR VFD
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 365 ---------------------LTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAP 403
+ E DL+S +MI + + G+ EAL F+ ++ G+ P
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 404 NGVTFISILLACNNAGLVEEGCQLFAFM-----KNNHNIELTREHFTCMIDLLGRSKRFE 458
+ V I+ L AC N G + G + ++ KNN + +IDL R E
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVS------NSLIDLYCRCGCVE 258
Query: 459 EAAMLINEVTNPDVVLWRTLL 479
A + + VV W +++
Sbjct: 259 FARQVFYNMEKRTVVSWNSVI 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 35/214 (16%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
+ C + +L+ VH +V+S F + + + LID Y +CG V AR++F M +R +
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
V+WNS+I ++G + +++ + M +G PDA TF+ A S +GLV G R
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRY--- 329
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGE 186
F M+ + + R+ + L+ Y+++G +
Sbjct: 330 -----------------------FQIMKCDYRISPRIEH-----YGCLVDLYSRAGRLED 361
Query: 187 ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
AL++ + M +KPNE + S LA+C N G+++
Sbjct: 362 ALKLVQSM---PMKPNEVVIGSLLAACSNHGNNI 392
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 222/407 (54%), Gaps = 7/407 (1%)
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
+ L GY+ S E++ V+ EM R +KPN+ T L +C + G+ I ++
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVS 290
K G + V +L+ +Y C D+ KVF+++ + V+W S + LV+NG+ +
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 291 VFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYG 350
F EMI P+ T+ +L AC +G+ +H+ +E N G AL+++Y
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACGGNL--SLGKLVHSQVMVRELELNCRLGTALVDMYA 258
Query: 351 KCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLF-KRIKKLGLAPNGVTFI 409
K G ++ AR VF+ + + ++ + ++MI AQ GF EALQLF K +K+ + PN VTF+
Sbjct: 259 KSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFL 318
Query: 410 SILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT- 468
+L AC++ GLV++G + F M+ H I+ H+ M+D+LGR+ R EA I ++
Sbjct: 319 GVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPF 378
Query: 469 NPDVVLWRTLLNACRIHGEIE---MAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQV 525
PD V+WRTLL+AC IH + + + EK+ +++++L P G +++ N +A A W +
Sbjct: 379 EPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEA 438
Query: 526 IEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
E++ +++ K+KK S +++ H F +G I+++L
Sbjct: 439 AEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELL 485
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 5/216 (2%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ L+ CA LT R + V+ GF + +G+ LI Y C ++ARK+FDEM
Sbjct: 116 FPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMT 175
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
ER++V+WNS+++A V +GK E + M+ + PD T + A G + G+
Sbjct: 176 ERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKL 233
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H +V LE L+ + +ALVDMYAK + A LVF+R+++K+V ++A+I G AQ G
Sbjct: 234 VHSQVMVRELE-LNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYG 292
Query: 183 LDGEALEVFREMV-DRRVKPNEYTLASTLASCGNLG 217
EAL++F +M+ + V+PN T L +C + G
Sbjct: 293 FAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTG 328
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 11/281 (3%)
Query: 225 IHGFIVKSGLE--SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT---WTSFVVGL 279
IHG I S L+ SF+ S+ L S S+ +D L ++S T W G
Sbjct: 32 IHGQIHLSSLQNDSFIISE---LVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGY 88
Query: 280 VQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNK 339
+ ++ V+ EM R + PN T +L+AC+S G QI K G + +
Sbjct: 89 SSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDV 148
Query: 340 DAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKL 399
G LI+LYG C AR VFD +TE ++VS NS++ A +NG + F +
Sbjct: 149 YVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGK 208
Query: 400 GLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEE 459
P+ T + +L AC G + G +L +EL T ++D+ +S E
Sbjct: 209 RFCPDETTMVVLLSAC--GGNLSLG-KLVHSQVMVRELELNCRLGTALVDMYAKSGGLEY 265
Query: 460 AAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
A ++ + + +V W ++ +G E A ++ K+++
Sbjct: 266 ARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMK 306
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 150/516 (29%), Positives = 257/516 (49%), Gaps = 40/516 (7%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMP 62
++ ++ C L LR +H V+ G+S + L ++D Y KC +++AR++FDE+
Sbjct: 165 FAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIV 224
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
V+WN ++ ++ G + +AV ++ ML V P +T S++ A S + G+
Sbjct: 225 NPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKV 284
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H +AV L + V D V++++ DMY K D++ A VFD+ KD+ +T+ ++GYA SG
Sbjct: 285 IHAIAVKLSV-VADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSG 343
Query: 183 LDGEALEVFREMVDRRV-------------------------------KPNEYTLASTLA 211
L EA E+F M +R + + TL L
Sbjct: 344 LTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILN 403
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA-YASHV 270
C + D G+ HGFI + G ++ V +LL MY +C ++ + F Q++ V
Sbjct: 404 VCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAIT 330
+W + + G+ + GR E A+S F E ++ P+ +TL+++L C++ +G+ IH
Sbjct: 464 SWNALLTGVARVGRSEQALSFF-EGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFL 522
Query: 331 TKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEAL 390
+ G + + A++++Y KC D A VF DL+ NS+I +NG E
Sbjct: 523 IRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVF 582
Query: 391 QLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDL 450
+LF ++ G+ P+ VTF+ IL AC G VE G Q F+ M ++I EH+ CMI+L
Sbjct: 583 ELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIEL 642
Query: 451 ---LGRSKRFEEAAMLINEVTNPDVVLWRTLLNACR 483
G + EE +L+ +P + + + +AC+
Sbjct: 643 YCKYGCLHQLEEFLLLMP--FDPPMQMLTRINDACQ 676
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 247/518 (47%), Gaps = 38/518 (7%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVIS-SGFSYCLLGHKLIDGYIKCGSVAEARKLFDEM 61
Y L C+ + R V +H+++ S L ++ I+ Y KCG V +AR+LF+EM
Sbjct: 63 LYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEM 122
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
PER +WN++I+A +G S + ++ M +GV +F+ + K+ + +R R
Sbjct: 123 PERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLR 182
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ H V G +V + +++VD+Y K M DA VFD ++ V + ++ Y +
Sbjct: 183 QLHCAVVKYGYSG-NVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
G + EA+ +F +M++ V+P +T++S + +C G++IH VK + +
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMI-RCSV 300
TS+ MY +C +E + +VF+Q +WTS + G +G A +F M R V
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 301 SPNPF------------------------------TLSSILQACSSRAMREVGEQIHAIT 330
S N TL IL CS + ++G+Q H
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 331 TKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL-DLVSVNSMIYAYAQNGFGYEA 389
+ G + N AL+++YGKCG + A F ++EL D VS N+++ A+ G +A
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 390 LQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM-KNNHNIELTREHFTCMI 448
L F+ + ++ P+ T ++L C N + G + F+ ++ + I++ M+
Sbjct: 482 LSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR--GAMV 538
Query: 449 DLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHG 486
D+ + + F+ A + E D++LW +++ C +G
Sbjct: 539 DMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNG 576
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 204/458 (44%), Gaps = 39/458 (8%)
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAY-TFSAIFKAFSELGLVRYGRRAHG 125
+T I H+ G +AV ++L P +Y + +F++ S LV R+
Sbjct: 30 LTVTRQILEHLEGGNVSKAV----SVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQS 85
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDG 185
V + +F+ + ++ Y K + DA +F+ + E+D + A+I AQ+G+
Sbjct: 86 HLVTFS-PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSD 144
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
E +FR M V+ E + A L SCG + D + +H +VK G V +TS++
Sbjct: 145 EVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIV 204
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
+Y +C ++ D+ +VF+++ S V+W V ++ G + AV +F +M+ +V P
Sbjct: 205 DVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH 264
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
T+SS++ ACS EVG+ IHAI KL + + ++ ++Y KC ++ AR VFD
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 366 TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAP---------------------- 403
DL S S + YA +G EA +LF + + +
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 404 ---------NGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRS 454
+ VT + IL C+ V+ G Q F+ H + ++D+ G+
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIY-RHGYDTNVIVANALLDMYGKC 443
Query: 455 KRFEEAAMLINEVTN-PDVVLWRTLLNACRIHGEIEMA 491
+ A + +++ D V W LL G E A
Sbjct: 444 GTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 14/291 (4%)
Query: 248 YSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTL 307
Y +C V+D+ ++F ++ +W + + QNG + +FR M R V +
Sbjct: 106 YGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Query: 308 SSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE 367
+ +L++C + Q+H K G GN D +++++YGKC + AR VFD +
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 368 LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQL 427
VS N ++ Y + GF EA+ +F ++ +L + P T S++LAC+ + +E G +
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 428 FAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGE 487
A + T T + D+ + R E A + ++ + D+ W + ++ + G
Sbjct: 286 HAIAVKLSVVADTVVS-TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGL 344
Query: 488 IEMAEKIM-----RKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIR 533
A ++ R ++ GG Y A +W++ ++ T +R
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGG--------YVHAHEWDEALDFLTLMR 387
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 264 LAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTL---SSILQACSSRAMR 320
+ + +T T ++ ++ G AVSV SP P + + ++CSS+A+
Sbjct: 24 IGTGTKLTVTRQILEHLEGGNVSKAVSVL------FASPEPVSYWLYERLFRSCSSKALV 77
Query: 321 EVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAY 380
++ + I YGKCG VD AR +F+ + E D S N++I A
Sbjct: 78 VQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITAC 137
Query: 381 AQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV-------EEGCQLFAFMKN 433
AQNG E ++F+R+ + G+ +F +L +C GL+ + C + + +
Sbjct: 138 AQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQLHCAVVKYGYS 194
Query: 434 NHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLL 479
N++L T ++D+ G+ + +A + +E+ NP V W ++
Sbjct: 195 G-NVDLE----TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIV 235
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 212/393 (53%), Gaps = 7/393 (1%)
Query: 198 RVKPNEYTLASTLASCGNLGDSVNGQLIHG--FIVKSGLESFVASQTSLLTMYSRCSMVE 255
+V+P Y A L C + G+ IH F+V L ++ + LL +Y+ ++
Sbjct: 105 QVEPETY--AVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYL--KVKLLILYALSGDLQ 160
Query: 256 DSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS 315
+ +F L + W + + G VQ G E+ + ++ +M + + P+ +T +S+ +ACS
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 316 SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNS 375
+ E G++ HA+ K ++ N +AL+++Y KC + VFD L+ ++++ S
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 376 MIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNH 435
+I Y +G E L+ F+++K+ G PN VTF+ +L ACN+ GLV++G + F MK ++
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Query: 436 NIELTREHFTCMIDLLGRSKRFEEA-AMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKI 494
IE +H+ M+D LGR+ R +EA ++ +W +LL ACRIHG +++ E
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELA 400
Query: 495 MRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHT 554
K L+L P +GG +++ N YAS G +++ + + +KK P S +++ EVH
Sbjct: 401 ATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHR 460
Query: 555 FMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPD 587
FM D SH + +I+ +HE+ + Y PD
Sbjct: 461 FMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 40/367 (10%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYC-LLGHKLIDGYIKCGSVAEARKLFDEMP 62
Y+ L+ +C K T + +HA + GF+ L KL+ Y G + A LF +
Sbjct: 111 YAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLK 170
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
R ++ WN+MIS +V G ++ + +Y +M ++PD YTF+++F+A S L + +G+R
Sbjct: 171 IRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKR 230
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
AH + + ++ ++ V SALVDMY K D H VFD++ ++V+ +T+LI+GY G
Sbjct: 231 AHAVMIKRCIKS-NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGN--------------------------- 215
E L+ F +M + +PN T L +C +
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 349
Query: 216 ------LGDSVNGQLIHGFIVKSGLESFVASQTSLL---TMYSRCSMVEDSVKVFNQLAY 266
LG + Q + F++KS + SLL ++ ++E + F +L
Sbjct: 350 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDP 409
Query: 267 ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI 326
+ + F G G E A V R+M V +P LQ R M++ +
Sbjct: 410 TNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKD--DTS 467
Query: 327 HAITTKL 333
H ++ K+
Sbjct: 468 HRLSEKI 474
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 146/280 (52%), Gaps = 5/280 (1%)
Query: 80 GKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFV 139
G+ K+AV G + G+ + T++ + + + G+R H V+G L+ ++
Sbjct: 90 GRLKEAV---GLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF-ALNEYL 145
Query: 140 ASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRV 199
L+ +YA ++ A ++F + +D++ + A+I+GY Q GL+ E L ++ +M R+
Sbjct: 146 KVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRI 205
Query: 200 KPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVK 259
P++YT AS +C L +G+ H ++K ++S + ++L+ MY +CS D +
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 260 VFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAM 319
VF+QL+ + +TWTS + G +G+ + F +M PNP T +L AC+ +
Sbjct: 266 VFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGL 325
Query: 320 REVG-EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ G E +++ G+E AA+++ G+ G + +A
Sbjct: 326 VDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 213/389 (54%), Gaps = 5/389 (1%)
Query: 162 RVLEKDVV--LFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
R+L++ + L+ ++ Y + +A++V+ MV V P+ Y+L + + + D
Sbjct: 74 RILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDF 133
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
G+ +H V+ G ++ +T+Y + E++ KVF++ +W + + GL
Sbjct: 134 TLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGL 193
Query: 280 VQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNK 339
GR AV +F +M R + P+ FT+ S+ +C + Q+H + E
Sbjct: 194 NHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKS 253
Query: 340 DAGA--ALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK 397
D +LI++YGKCG +D A +F+ + + ++VS +SMI YA NG EAL+ F++++
Sbjct: 254 DIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR 313
Query: 398 KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRF 457
+ G+ PN +TF+ +L AC + GLVEEG FA MK+ +E H+ C++DLL R +
Sbjct: 314 EFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQL 373
Query: 458 EEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLY 516
+EA ++ E+ P+V++W L+ C G++EMAE + +++L P + G +++L N+Y
Sbjct: 374 KEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVY 433
Query: 517 ASAGKWNQVIEMKTTIRDLKLKKSPARSW 545
A G W V ++ ++ K+ K PA S+
Sbjct: 434 ALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 185/381 (48%), Gaps = 21/381 (5%)
Query: 3 FYSSLITQ-----CAHTKSLTTLRAVHAHVISSGFSYCLLG----HKLIDGYI-KCGSVA 52
F+S LI++ T T ++ V +S S L +KL+ + C S+A
Sbjct: 2 FFSGLISKLHVHGTKRTNHFTIFHRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLA 61
Query: 53 EARKLFDEMPERHIVT-------WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFS 105
R++ ++ I+ WN+++ +++ H A+++Y M+ VLPD Y+
Sbjct: 62 RVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLP 121
Query: 106 AIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE 165
+ KA ++ G+ H +AV LG V D F S + +Y K + +A VFD E
Sbjct: 122 IVIKAAVQIHDFTLGKELHSVAVRLGF-VGDEFCESGFITLYCKAGEFENARKVFDENPE 180
Query: 166 KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLI 225
+ + + A+I G +G EA+E+F +M ++P+++T+ S ASCG LGD +
Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQL 240
Query: 226 HGFIVKSGLE--SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNG 283
H ++++ E S + SL+ MY +C ++ + +F ++ + V+W+S +VG NG
Sbjct: 241 HKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANG 300
Query: 284 REEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA-ITTKLGMEGNKDAG 342
A+ FR+M V PN T +L AC + E G+ A + ++ +E
Sbjct: 301 NTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHY 360
Query: 343 AALINLYGKCGNVDKARSVFD 363
+++L + G + +A+ V +
Sbjct: 361 GCIVDLLSRDGQLKEAKKVVE 381
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 150/307 (48%), Gaps = 30/307 (9%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGF---SYCLLGHKLIDGYIKCGSVAEARKLFDEMPE 63
+I T + +H+ + GF +C G I Y K G ARK+FDE PE
Sbjct: 123 VIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESG--FITLYCKAGEFENARKVFDENPE 180
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
R + +WN++I G++ +AVE++ +M G+ PD +T ++ + LG + +
Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQL 240
Query: 124 HGLAVVLGLE-VLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG 182
H + E D+ + ++L+DMY K +M A +F+ + +++VV ++++I GYA +G
Sbjct: 241 HKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANG 300
Query: 183 LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG--------- 233
EALE FR+M + V+PN+ T L++C +HG +V+ G
Sbjct: 301 NTLEALECFRQMREFGVRPNKITFVGVLSAC-----------VHGGLVEEGKTYFAMMKS 349
Query: 234 ---LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV-TWTSFVVGLVQNGREEVAV 289
LE ++ ++ + SR ++++ KV ++ +V W + G + G E+A
Sbjct: 350 EFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Query: 290 SVFREMI 296
V M+
Sbjct: 410 WVAPYMV 416
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 249/474 (52%), Gaps = 46/474 (9%)
Query: 118 RYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAG 177
+ G++ H + G + D+ ++ L+ ++ K + A VFD + + + + +I+G
Sbjct: 51 KAGKKIHADIIKTGFQP-DLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISG 109
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN-----GQLIHGFIVKS 232
Y + GL E L + + M K + YTL+ L + + G ++ +L+H I+K
Sbjct: 110 YLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKC 169
Query: 233 GLE-----------SFVASQ--------------------TSLLTMYSRCSMVEDSVKVF 261
+E ++V S TS+++ Y VED+ ++F
Sbjct: 170 DVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIF 229
Query: 262 NQLAYASHVTWTSFVVGLVQNGRE-EVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMR 320
N V + + V G ++G + +V ++ M R PN T +S++ ACS
Sbjct: 230 NTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSH 289
Query: 321 EVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAY 380
EVG+Q+HA K G+ + G++L+++Y KCG ++ AR VFD + E ++ S SMI Y
Sbjct: 290 EVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 381 AQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELT 440
+NG EAL+LF R+K+ + PN VTF+ L AC+++GLV++G ++F M+ +++++
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 441 REHFTCMIDLLGRS----KRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMR 496
EH+ C++DL+GR+ K FE A + PD +W LL++C +HG +E+A
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPER---PDSDIWAALLSSCNLHGNVELASIAAS 466
Query: 497 KVLQL-APGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVD 549
++ +L A G ++ L+N+YAS KW+ V +++ ++ ++ K+ RSW D
Sbjct: 467 ELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 188/377 (49%), Gaps = 40/377 (10%)
Query: 21 RAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSH 79
+ +HA +I +GF L + KL+ ++KCG ++ AR++FDE+P+ + +N MIS ++ H
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 80 GKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELG----LVR-YGRRAHGLAVVLGLEV 134
G K+ + L M G D YT S + KA + G L R R H + +E+
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 135 LDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFR-- 192
DV + +ALVD Y K K+ A VF+ + +++VV T++I+GY G +A E+F
Sbjct: 174 DDVLI-TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 193 -------------------EMVDRRVK-----------PNEYTLASTLASCGNLGDSVNG 222
E R V PN T AS + +C L G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 223 QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQN 282
Q +H I+KSG+ + + +SLL MY++C + D+ +VF+Q+ + +WTS + G +N
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 283 GREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLGMEGNKDA 341
G E A+ +F M + PN T L ACS + + G +I ++ M+ +
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 342 GAALINLYGKCGNVDKA 358
A +++L G+ G+++KA
Sbjct: 413 YACIVDLMGRAGDLNKA 429
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
++S+I C+ S + VHA ++ SG +++ +G L+D Y KCG + +AR++FD+M
Sbjct: 276 FASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ 335
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
E+++ +W SMI + +G ++A+EL+ M + P+ TF A S GLV G
Sbjct: 336 EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKG 393
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 152/347 (43%), Gaps = 46/347 (13%)
Query: 199 VKPNEYTLASTLASCGNLGDSVN------GQLIHGFIVKSGLESFVASQTSLLTMYSRCS 252
+K N +L+ G L + +N G+ IH I+K+G + + LL ++ +C
Sbjct: 24 LKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCG 83
Query: 253 MVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQ 312
+ + +VF++L + + + G +++G + + + + M + +TLS +L+
Sbjct: 84 CLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLK 143
Query: 313 ACSSRA-----MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE 367
A +SR R + +HA K +E + AL++ Y K G ++ AR+VF+ + +
Sbjct: 144 ASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 368 LDLVSVNSMIYAYAQNGFGYEALQLFKRIK------------------------------ 397
++V SMI Y GF +A ++F K
Sbjct: 204 ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYIS 263
Query: 398 --KLGLAPNGVTFISILLACNNAGLVEEGCQLFA-FMKNNHNIELTREHFTCMIDLLGRS 454
+ G PN TF S++ AC+ E G Q+ A MK+ + + + ++D+ +
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHI--KMGSSLLDMYAKC 321
Query: 455 KRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQL 501
+A + +++ +V W ++++ +G E A ++ ++ +
Sbjct: 322 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEF 368
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 217/395 (54%), Gaps = 19/395 (4%)
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTL----ASCGNLGDSVNGQLIHGFIVKSG 233
Y +SG +AL FR R P+ S L S S++G+ IH + K G
Sbjct: 38 YLESGEPIKALLDFRHRF--RQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLG 95
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT-WTSFVVGLVQNGREEVAVSVF 292
+ + QTSL+ YS V+ + +VF++ ++ WT+ + +N A+ +F
Sbjct: 96 FNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELF 155
Query: 293 REMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA--ITTKLGMEGNKDAGAALINLYG 350
+ M + + ++ L AC+ ++GE+I++ I K + + +L+N+Y
Sbjct: 156 KRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYV 215
Query: 351 KCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG------LAPN 404
K G +KAR +FD D+ + SMI+ YA NG E+L+LFK++K + + PN
Sbjct: 216 KSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPN 275
Query: 405 GVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLI 464
VTFI +L+AC+++GLVEEG + F M ++N++ HF CM+DL RS ++A I
Sbjct: 276 DVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFI 335
Query: 465 NEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWN 523
N++ P+ V+WRTLL AC +HG +E+ E++ R++ +L G ++ L+N+YAS G W+
Sbjct: 336 NQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWD 395
Query: 524 QVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAG 558
+ +M+ +R ++ P +SW+++ ++ F++G
Sbjct: 396 EKSKMRDRVRK---RRMPGKSWIELGSIINEFVSG 427
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 45/353 (12%)
Query: 21 RAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPER-HIVTWNSMISAHVS 78
R +HA V GF+ + + L+ Y G V AR++FDE PE+ +IV W +MISA+
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTE 144
Query: 79 HGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV-LDV 137
+ S +A+EL+ M E + D + A ++LG V+ G + ++ + +D+
Sbjct: 145 NENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDL 204
Query: 138 FVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM--- 194
+ ++L++MY K + A +FD + KDV +T++I GYA +G E+LE+F++M
Sbjct: 205 TLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTI 264
Query: 195 ---VDRRVKPNEYTLASTLASCGNLGDSVNGQL-IHGFIVKSGLESFVASQTSLLTMYSR 250
D + PN+ T L +C + G G+ I+ L+ A ++ ++ R
Sbjct: 265 DQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR 324
Query: 251 CSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSI 310
++D+ + NQ+ + PN ++
Sbjct: 325 SGHLKDAHEFINQMP----------------------------------IKPNTVIWRTL 350
Query: 311 LQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
L ACS E+GE++ +L + D AL N+Y G D+ + D
Sbjct: 351 LGACSLHGNVELGEEVQRRIFELDRDHVGDY-VALSNIYASKGMWDEKSKMRD 402
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 223/427 (52%), Gaps = 38/427 (8%)
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
A+ VF + +V++F A+I Y+ G E+L F M R + +EYT A L SC +
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFN------------- 262
L D G+ +HG ++++G + ++ +Y+ + D+ KVF+
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 263 ------------------QLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNP 304
Q++ S V+W S + L + GR+ A+ +F EMI P+
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 305 FTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD---AGAALINLYGKCGNVDKARSV 361
T+ ++L +S + + G+ IH+ G+ KD G AL++ Y K G+++ A ++
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGL--FKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 362 FDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISILLACNNAGL 420
F + ++VS N++I A NG G + LF + + G +APN TF+ +L C+ G
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQ 352
Query: 421 VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA-AMLINEVTNPDVVLWRTLL 479
VE G +LF M +E EH+ M+DL+ RS R EA L N N + +W +LL
Sbjct: 353 VERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLL 412
Query: 480 NACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKK 539
+ACR HG++++AE +++++ PG+ G ++LL+NLYA G+W V +++T ++ +L+K
Sbjct: 413 SACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRK 472
Query: 540 SPARSWV 546
S +S +
Sbjct: 473 STGQSTI 479
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 178/381 (46%), Gaps = 46/381 (12%)
Query: 18 TTLRAVHAHVISSGF--SYCLLGHKLIDGYIK-CGSVAE---ARKLFDEMPERHIVTWNS 71
T L +HAH++ S LL H +I CGS++ A ++F + +++ +N+
Sbjct: 18 TRLPEIHAHLLRHFLHGSNLLLAH-----FISICGSLSNSDYANRVFSHIQNPNVLVFNA 72
Query: 72 MISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLG 131
MI + G +++ + +M G+ D YT++ + K+ S L +R+G+ HG + G
Sbjct: 73 MIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTG 132
Query: 132 LEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS---------- 181
L + +V++Y +M DA VFD + E++VV++ +I G+ S
Sbjct: 133 FHRLGK-IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLF 191
Query: 182 ---------------------GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
G D EALE+F EM+D+ P+E T+ + L +LG
Sbjct: 192 KQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLD 251
Query: 221 NGQLIHGFIVKSGL-ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
G+ IH SGL + F+ +L+ Y + +E + +F ++ + V+W + + G
Sbjct: 252 TGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGS 311
Query: 280 VQNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAI-TTKLGMEG 337
NG+ E + +F MI V+PN T +L CS E GE++ + + +E
Sbjct: 312 AVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEA 371
Query: 338 NKDAGAALINLYGKCGNVDKA 358
+ A+++L + G + +A
Sbjct: 372 RTEHYGAMVDLMSRSGRITEA 392
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 47/335 (14%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKL-------IDGYIKCGSVAEARK 56
Y+ L+ C+ L + VH +I +GF H+L ++ Y G + +A+K
Sbjct: 105 YAPLLKSCSSLSDLRFGKCVHGELIRTGF------HRLGKIRIGVVELYTSGGRMGDAQK 158
Query: 57 LFDEMPERH-------------------------------IVTWNSMISAHVSHGKSKQA 85
+FDEM ER+ IV+WNSMIS+ G+ ++A
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 86 VELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVD 145
+EL+ M+ +G PD T + + LG++ G+ H A GL + V +ALVD
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 146 MYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR-RVKPNEY 204
Y K + A +F ++ ++VV + LI+G A +G +++F M++ +V PNE
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 205 TLASTLASCGNLGDSVNGQLIHGFIVKS-GLESFVASQTSLLTMYSRCSMVEDSVKVF-N 262
T LA C G G+ + G +++ LE+ +++ + SR + ++ K N
Sbjct: 339 TFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKN 398
Query: 263 QLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR 297
A+ W S + +G ++A E+++
Sbjct: 399 MPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 193/370 (52%), Gaps = 35/370 (9%)
Query: 310 ILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELD 369
+ ++C++ E +++H + G+ +I+++G+C ++ A+ VFD + + D
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 370 LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFA 429
+ S + M+ AY+ NG G +AL LF+ + K GL PN TF+++ LAC G +EE F
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFD 361
Query: 430 FMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEI 488
MKN H I EH+ ++ +LG+ EA I ++ P W + N R+HG+I
Sbjct: 362 SMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDI 421
Query: 489 EMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTI--RDLKLKKSPARSWV 546
++ + + ++ + P + + T S + N V + R+L K A+
Sbjct: 422 DLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAK--- 478
Query: 547 DVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYY 606
E+ K K + Y PDTRFVL D+ +E K +L Y
Sbjct: 479 ---------------------------EMAAK-KGVVYVPDTRFVLHDIDQEAKEQALLY 510
Query: 607 HSEKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFK 666
HSE+LAIA+ + T R T + I KNLRVCGDCH++IK ++ + GR +I RD+KRFHHFK
Sbjct: 511 HSERLAIAYGIICTPPRKT-LTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFK 569
Query: 667 GGLCSCKDYW 676
G CSC DYW
Sbjct: 570 DGKCSCGDYW 579
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 83 KQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASA 142
K A+EL L +G +PD F +F++ + L + + ++ H + D + +
Sbjct: 222 KDAIEL----LDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRG-DPKLNNM 276
Query: 143 LVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPN 202
++ M+ + + DA VFD +++KD+ + ++ Y+ +G+ +AL +F EM +KPN
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 203 EYTLASTLASCGNLG 217
E T + +C +G
Sbjct: 337 EETFLTVFLACATVG 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
L CA+ KSL + VH H + S F L + +I + +C S+ +A+++FD M ++
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELG 115
+ +W+ M+ A+ +G A+ L+ M G+ P+ TF +F A + +G
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 193 EMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCS 252
E++D+ P+ SC NL + + +H ++S +++M+ CS
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 253 MVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQ 312
+ D+ +VF+ + +W + NG + A+ +F EM + + PN T ++
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 313 ACSS-RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
AC++ + E ++ + G+ + ++ + GKCG++ +A
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEA 392
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 266/560 (47%), Gaps = 63/560 (11%)
Query: 39 HKLIDGYIKCGSV---AEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE 95
+ +I GY+ CG + EARKLFDEMP R +WN+MIS + + + +A+ L+ M
Sbjct: 106 NTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVL--GLEVLDVFVASALVDMYAKFDKM 153
+A ++SA+ F + G V AVVL + V D ALV K +++
Sbjct: 166 ----NAVSWSAMITGFCQNGEV-------DSAVVLFRKMPVKDSSPLCALVAGLIKNERL 214
Query: 154 RDAHLVFDRV------LEKDVVLFTALIAGYAQSGLDGEALEVFREMVD----------- 196
+A V + E V + LI GY Q G A +F ++ D
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 197 RRVKPNEYTLASTLASCGNLGDSVNGQL----------------IHGFIVKSGLESFVA- 239
R N + S + + +GD V+ +L I G++ S +E A
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFAL 334
Query: 240 ----------SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAV 289
S +++ Y+ VE + F + V+W S + +N + AV
Sbjct: 335 FSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAV 394
Query: 290 SVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLY 349
+F M P+P TL+S+L A + +G Q+H I K + + ALI +Y
Sbjct: 395 DLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMY 453
Query: 350 GKCGNVDKARSVFDVLT-ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTF 408
+CG + ++R +FD + + ++++ N+MI YA +G EAL LF +K G+ P+ +TF
Sbjct: 454 SRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Query: 409 ISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT 468
+S+L AC +AGLV+E F M + + IE EH++ ++++ +FEEA +I +
Sbjct: 514 VSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP 573
Query: 469 -NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIE 527
PD +W LL+ACRI+ + +A + +L P ++LL N+YA G W++ +
Sbjct: 574 FEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQ 633
Query: 528 MKTTIRDLKLKKSPARSWVD 547
++ + ++KK SWVD
Sbjct: 634 VRMNMESKRIKKERGSSWVD 653
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Query: 6 SLITQCAHTKSLTTLR---AVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+L + + + L LR +H V+ + + + LI Y +CG + E+R++FDEM
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 63 -ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLV 117
+R ++TWN+MI + HG + +A+ L+G+M G+ P TF ++ A + GLV
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLV 526
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 346 INLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNG 405
+N + G + +AR +F+ L + V+ N+MI Y + +A +LF + K +
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 406 VTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT--CMIDLLGRSKRFEEAAML 463
T IS ++C +EE +LF M +R+ F+ MI +++R EA +L
Sbjct: 107 -TMISGYVSCGGIRFLEEARKLFDEMP-------SRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 464 INEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
++ + V W ++ +GE++ A + RK+
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 221/423 (52%), Gaps = 11/423 (2%)
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
A+ VF ++EK+VVL+T++I GY + A F +R + T+ S GN
Sbjct: 47 ANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWN-TMISGYIEMGN 105
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSF 275
+ ++ + L + V S ++L Y+ +E +VF+ + + +W
Sbjct: 106 MLEARS--LFDQMPCRD-----VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGL 158
Query: 276 VVGLVQNGREEVAVSVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLG 334
+ G QNGR + F+ M+ SV PN T++ +L AC+ + G+ +H LG
Sbjct: 159 IKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLG 218
Query: 335 MEG-NKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLF 393
+ + ALI++YGKCG ++ A VF + DL+S N+MI A +G G EAL LF
Sbjct: 219 YNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLF 278
Query: 394 KRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGR 453
+K G++P+ VTF+ +L AC + GLVE+G F M + +I EH C++DLL R
Sbjct: 279 HEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSR 338
Query: 454 SKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILL 512
+ +A IN++ D V+W TLL A +++ ++++ E + ++++L P + ++L
Sbjct: 339 AGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVML 398
Query: 513 TNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
+N+Y AG+++ +K +RD KK SW++ D + F + HPR E+ +L
Sbjct: 399 SNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRIL 458
Query: 573 HEL 575
EL
Sbjct: 459 REL 461
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 36 LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE 95
+L +I+GY+ + AR+ FD PER IV WN+MIS ++ G +A L+ M
Sbjct: 60 VLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR 119
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
DV + +++ YA M
Sbjct: 120 ----------------------------------------DVMSWNTVLEGYANIGDMEA 139
Query: 156 AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR-RVKPNEYTLASTLASCG 214
VFD + E++V + LI GYAQ+G E L F+ MVD V PN+ T+ L++C
Sbjct: 140 CERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACA 199
Query: 215 NLGDSVNGQLIHGFIVKSGLESF-VASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWT 273
LG G+ +H + G V + +L+ MY +C +E +++VF + ++W
Sbjct: 200 KLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWN 259
Query: 274 SFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG 323
+ + GL +G A+++F EM +SP+ T +L AC + E G
Sbjct: 260 TMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 149/322 (46%), Gaps = 37/322 (11%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-V 97
+ +++GY G + ++FD+MPER++ +WN +I + +G+ + + + M+ EG V
Sbjct: 125 NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV 184
Query: 98 LPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAH 157
+P+ T + + A ++LG +G+ H LG +DV V +AL+DMY K + A
Sbjct: 185 VPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAM 244
Query: 158 LVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
VF + +D++ + +I G A G EAL +F EM + + P++ T L +C ++G
Sbjct: 245 EVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMG 304
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVV 277
+V+ GL F S+ T +S +E V + L+ A +T
Sbjct: 305 -----------LVEDGLAYF----NSMFTDFSIMPEIEHCGCVVDLLSRAGFLT------ 343
Query: 278 GLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEG 337
AV +M V + +++L A ++GE A+ + +E
Sbjct: 344 ---------QAVEFINKM---PVKADAVIWATLLGASKVYKKVDIGEV--ALEELIKLEP 389
Query: 338 NKDAGAALI-NLYGKCGNVDKA 358
A ++ N+YG G D A
Sbjct: 390 RNPANFVMLSNIYGDAGRFDDA 411
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 33/260 (12%)
Query: 240 SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQN-----GREEVAVSVFRE 294
+Q L M ++ + KVF ++ + V WTS + G + N R +S R+
Sbjct: 30 NQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERD 89
Query: 295 MIRCSVSPNPFT-LSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
++ + + + + ++L+A R++ + ++ +EG Y G
Sbjct: 90 IVLWNTMISGYIEMGNMLEA---RSLFDQMPCRDVMSWNTVLEG-----------YANIG 135
Query: 354 NVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISIL 412
+++ VFD + E ++ S N +I YAQNG E L FKR+ G + PN T +L
Sbjct: 136 DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVL 195
Query: 413 LACNNAGLVEEG------CQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINE 466
AC G + G + + K + N++ +ID+ G+ E A +
Sbjct: 196 SACAKLGAFDFGKWVHKYGETLGYNKVDVNVK------NALIDMYGKCGAIEIAMEVFKG 249
Query: 467 VTNPDVVLWRTLLNACRIHG 486
+ D++ W T++N HG
Sbjct: 250 IKRRDLISWNTMINGLAAHG 269
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 253/525 (48%), Gaps = 5/525 (0%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHI 66
LI + + +H +++ +G + + + A +F+ + ++
Sbjct: 31 LINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVSNTNL 90
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
+N+MI + + ++A ++ + +G+ D ++F K+ S V G HG+
Sbjct: 91 FMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGI 150
Query: 127 AVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK-DVVLFTALIAGYAQSGLDG 185
A+ G V + +AL+ Y K+ DA VFD + + D V F+ L+ GY Q
Sbjct: 151 ALRSGFMVF-TDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKA 209
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
AL++FR M V N TL S L++ +LGD + H +K GL+ + T+L+
Sbjct: 210 LALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALI 269
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
MY + + + ++F+ VTW + + G E V + R+M + PN
Sbjct: 270 GMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSS 329
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL 365
T +L +C+ VG + + + + + G AL+++Y K G ++KA +F+ +
Sbjct: 330 TFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 366 TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK--LGLAPNGVTFISILLACNNAGLVEE 423
+ D+ S +MI Y +G EA+ LF ++++ + PN +TF+ +L AC++ GLV E
Sbjct: 390 KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVME 449
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLI-NEVTNPDVVLWRTLLNAC 482
G + F M ++ EH+ C++DLLGR+ + EEA LI N D WR LL AC
Sbjct: 450 GIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAAC 509
Query: 483 RIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIE 527
R++G ++ E +M ++ ++ ILL +A AG + ++
Sbjct: 510 RVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLD 554
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 187/366 (51%), Gaps = 18/366 (4%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFS-YCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+ + + C+ ++ +H + SGF + L + LI Y CG +++ARK+FDEMP
Sbjct: 128 FITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMP 187
Query: 63 ER-HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
+ VT++++++ ++ K A++L+ M V+ + T + A S+LG +
Sbjct: 188 QSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAE 247
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
AH L + +GL+ LD+ + +AL+ MY K + A +FD + KDVV + +I YA++
Sbjct: 248 SAHVLCIKIGLD-LDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKT 306
Query: 182 GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
GL E + + R+M ++KPN T L+SC + G+ + + + +
Sbjct: 307 GLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILG 366
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR--CS 299
T+L+ MY++ ++E +V++FN++ +WT+ + G +G AV++F +M C
Sbjct: 367 TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCK 426
Query: 300 VSPNPFTLSSILQACSSRAMREVG-------EQIHAITTKLGMEGNKDAGAALINLYGKC 352
V PN T +L ACS + G + ++ T K+ G +++L G+
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYG------CVVDLLGRA 480
Query: 353 GNVDKA 358
G +++A
Sbjct: 481 GQLEEA 486
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 254/509 (49%), Gaps = 39/509 (7%)
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVV 129
+++I H+S G QA+ LYG + GV + + + V G+ H ++
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 130 LGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALE 189
G+ DV V S+L+ MY K + A VFD + E++V + A+I GY +G A
Sbjct: 75 FGV-CSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 190 VFREM---------------VDRRVKPNE---------YTLASTLASCGNLGDSVNGQLI 225
+F E+ +R++ + + L + A LG VN + +
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKM 193
Query: 226 HG----FIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQ 281
F +FV S +++ Y R V ++ +F ++ V W + + G Q
Sbjct: 194 EDARKFFEDIPEKNAFVWSL--MMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQ 251
Query: 282 NGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDA 341
NG + A+ F M P+ T+SSIL AC+ +VG ++H++ G+E N+
Sbjct: 252 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFV 311
Query: 342 GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGL 401
ALI++Y KCG+++ A SVF+ ++ + NSMI A +G G EAL++F ++ L L
Sbjct: 312 SNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 402 APNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAA 461
P+ +TFI++L AC + G + EG ++F+ MK +++ +HF C+I LLGRS + +EA
Sbjct: 372 KPDEITFIAVLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAY 430
Query: 462 MLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTH-----ILLTNL 515
L+ E+ P+ + LL AC++H + EMAE++M K+++ A ++ ++NL
Sbjct: 431 RLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM-KIIETAGSITNSYSENHLASISNL 489
Query: 516 YASAGKWNQVIEMKTTIRDLKLKKSPARS 544
YA +W ++ + L+KSP S
Sbjct: 490 YAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 174/367 (47%), Gaps = 32/367 (8%)
Query: 21 RAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSH 79
+ +H+ I G S ++G LI Y KCG V ARK+FDEMPER++ TWN+MI ++S+
Sbjct: 66 KLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSN 125
Query: 80 GKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR-----------AHGLAV 128
G + A L+ + V + T+ + K + + + R +V
Sbjct: 126 GDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSV 182
Query: 129 VLGLEV-----------------LDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLF 171
+LG+ V + FV S ++ Y + + +A +F RV +D+V++
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW 242
Query: 172 TALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVK 231
LIAGYAQ+G +A++ F M +P+ T++S L++C G G+ +H I
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH 302
Query: 232 SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSV 291
G+E +L+ MY++C +E++ VF ++ S S + L +G+ + A+ +
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEM 362
Query: 292 FREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGK 351
F M + P+ T ++L AC G +I + ++ N LI+L G+
Sbjct: 363 FSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGR 422
Query: 352 CGNVDKA 358
G + +A
Sbjct: 423 SGKLKEA 429
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 38/312 (12%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
++ GY + G V EAR +F + R +V WN++I+ + +G S A++ + NM EG PD
Sbjct: 214 MMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
A T S+I A ++ G + GR H L G+E L+ FV++AL+DMYAK + +A VF
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSLINHRGIE-LNQFVSNALIDMYAKCGDLENATSVF 332
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
+ + + V ++I+ A G EALE+F M +KP+E T + L +C
Sbjct: 333 ESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC------- 385
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLV 280
+HG + GL+ F +T V+ +VK F L + L
Sbjct: 386 ----VHGGFLMEGLKIFSEMKT---------QDVKPNVKHFGCLIHL-----------LG 421
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGN-- 338
++G+ + A + +EM V PN L ++L AC E+ EQ+ I G N
Sbjct: 422 RSGKLKEAYRLVKEM---HVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSY 478
Query: 339 -KDAGAALINLY 349
++ A++ NLY
Sbjct: 479 SENHLASISNLY 490
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYC-LLGHKLIDGYIKCGSVAEARKLFDEMPE 63
SS+++ CA + L R VH+ + G + + LID Y KCG + A +F+ +
Sbjct: 278 SSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISV 337
Query: 64 RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRA 123
R + NSMIS HGK K+A+E++ M + PD TF A+ A
Sbjct: 338 RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC-----------V 386
Query: 124 HGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGL 183
HG ++ GL++ F +M+ ++ +V F LI +SG
Sbjct: 387 HGGFLMEGLKI---------------FSEMKTQD------VKPNVKHFGCLIHLLGRSGK 425
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASC 213
EA + +EM VKPN+ L + L +C
Sbjct: 426 LKEAYRLVKEM---HVKPNDTVLGALLGAC 452
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 211/401 (52%), Gaps = 14/401 (3%)
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGE---ALEVFREMVDRR---VKPNEYTLASTLAS 212
+ ++ V L+ LI+ + + A ++ +++ R V+PNE+T S +
Sbjct: 62 ILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA 121
Query: 213 CG-NLGDSVNGQLIHGFIVK----SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA 267
G + +G+ +H ++K + FV Q +L+ Y+ C + ++ +F ++
Sbjct: 122 SGFDAQWHRHGRALHAHVLKFLEPVNHDRFV--QAALVGFYANCGKLREARSLFERIREP 179
Query: 268 SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIH 327
TW + + + + V +R V PN +L +++++C++ G H
Sbjct: 180 DLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAH 239
Query: 328 AITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGY 387
K + N+ G +LI+LY KCG + AR VFD +++ D+ N+MI A +GFG
Sbjct: 240 VYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQ 299
Query: 388 EALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCM 447
E ++L+K + GL P+ TF+ + AC+++GLV+EG Q+F MK + IE EH+ C+
Sbjct: 300 EGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCL 359
Query: 448 IDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDG 506
+DLLGRS R EEA I ++ P+ LWR+ L + + HG+ E E ++ +L L +
Sbjct: 360 VDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENS 419
Query: 507 GTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVD 547
G ++LL+N+YA +W V + + ++D ++ KSP S ++
Sbjct: 420 GNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 193/368 (52%), Gaps = 24/368 (6%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERH 65
+LI++C KSL L+ +HA +I+ G S+ + ++ A + ++P
Sbjct: 14 NLISKC---KSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPS 70
Query: 66 IVTWNSMISAHVSHGKSKQ---AVELYGNMLVEG---VLPDAYTFSAIFKAFS-ELGLVR 118
+ +N++IS+ VS+ S Q A LY +L V P+ +T+ ++FKA + R
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 119 YGRRAHGLAVVLGLEVL--DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIA 176
+GR H V+ LE + D FV +ALV YA K+R+A +F+R+ E D+ + L+A
Sbjct: 131 HGRALHA-HVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLA 189
Query: 177 GYAQS---GLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
YA S D E L +F M +V+PNE +L + + SC NLG+ V G H +++K+
Sbjct: 190 AYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN 246
Query: 234 --LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSV 291
L FV TSL+ +YS+C + + KVF++++ + + + GL +G + + +
Sbjct: 247 LTLNQFVG--TSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIEL 304
Query: 292 FREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITTKLGMEGNKDAGAALINLYG 350
++ +I + P+ T + ACS + + G QI +++ G+E + L++L G
Sbjct: 305 YKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLG 364
Query: 351 KCGNVDKA 358
+ G +++A
Sbjct: 365 RSGRLEEA 372
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 194/368 (52%), Gaps = 18/368 (4%)
Query: 310 ILQACSSRAMREVGEQIHA-ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL 368
I Q C + + +H IT+ +G+ + A ++I +Y CG+V+ A +VF+ + E
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGIS-DISAYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 369 DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLF 428
+L + +I +A+NG G +A+ F R K+ G P+G F I AC G + EG F
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 429 AFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEI 488
M + I EH+ ++ +L +EA + E P+V LW TL+N R+HG++
Sbjct: 306 ESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFV-ESMEPNVDLWETLMNLSRVHGDL 364
Query: 489 EMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDV 548
+ ++ V QL N + AG ++ +K++ DL +K+ R
Sbjct: 365 ILGDRCQDMVEQLDAS-------RLNKESKAG----LVPVKSS--DL-VKEKLQRMAKGP 410
Query: 549 DREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHS 608
+ + AGD+S P E++ L L E +GY P ++ L D+ +E K +L+ H+
Sbjct: 411 NYGIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHN 470
Query: 609 EKLAIAFALWKTCGRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGG 668
E+ A T R+ IR+ KNLRVC DCH+ +K ++ + GR++I+RD+KRFHH K G
Sbjct: 471 ERFAFISTFLDTPARSL-IRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDG 529
Query: 669 LCSCKDYW 676
+CSC++YW
Sbjct: 530 VCSCREYW 537
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 11 CAHTKSLTTLRAVHAHVISS-GFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTW 69
C ++L + VH + SS G S + +I+ Y CGSV +A +F+ MPER++ TW
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG-------RR 122
+I +G+ + A++ + EG PD F IF A LG + G +
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALI 175
+G+ + ++ +V +LV M A+ + +A L F +E +V L+ L+
Sbjct: 311 EYGI-----IPCMEHYV--SLVKMLAEPGYLDEA-LRFVESMEPNVDLWETLM 355
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%)
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
CG+ +++H FI S S +++ S++ MYS C VED++ VFN + + TW
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQAC 314
+ +NG+ E A+ F + P+ I AC
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFAC 292
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Query: 80 GKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFV 139
GK K+AVE+ + EG + D I + + ++ + H + + + D+
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEF-ITSSVGISDISA 218
Query: 140 ASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRV 199
+++++MY+ + DA VF+ + E+++ + +I +A++G +A++ F
Sbjct: 219 YNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN 278
Query: 200 KPNEYTLASTLASCGNLGDSVNGQLIH 226
KP+ +CG LGD +N L+H
Sbjct: 279 KPDGEMFKEIFFACGVLGD-MNEGLLH 304
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 259/508 (50%), Gaps = 32/508 (6%)
Query: 68 TWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLA 127
+W ++ H K K+ V++Y +M G+ P ++ +++ +A ++ + G+ H A
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 128 VVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEA 187
+ GL V+V + LV +Y++ + A FD + EK+ V + +L+ GY +SG EA
Sbjct: 131 LKNGL-CGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA 189
Query: 188 LEVFREMVDRR-VKPNEYTLASTLASCGNLGDSVN-------------GQLIHGFI---- 229
VF ++ ++ V N + S+ A G++G++ + LI G++
Sbjct: 190 RRVFDKIPEKDAVSWN--LIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCRE 247
Query: 230 VKSGLESFVA-------SQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQN 282
+K F A S ++++ Y++ V+ + ++F ++ + + + + QN
Sbjct: 248 MKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 307
Query: 283 GREEVAVSVFREMIR--CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
G+ + A+ +F +M+ + P+ TLSS++ A S G + + T+ G++ +
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDL 367
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
+LI+LY K G+ KA +F L + D VS ++MI NG EA LF + +
Sbjct: 368 LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKK 427
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA 460
+ PN VTF +L A +++GLV+EG + F MK +HN+E + +H+ M+D+LGR+ R EEA
Sbjct: 428 IPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLGRAGRLEEA 486
Query: 461 AMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASA 519
LI + P+ +W LL A +H +E E ++L G L +Y+S
Sbjct: 487 YELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSV 546
Query: 520 GKWNQVIEMKTTIRDLKLKKSPARSWVD 547
G+W+ ++ +I++ KL K+ SWV+
Sbjct: 547 GRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 185/395 (46%), Gaps = 57/395 (14%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCL------------LGH------------- 39
+S++ C +++ + +HA + +G C+ LG+
Sbjct: 108 TSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAE 167
Query: 40 -------KLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNM 92
L+ GY++ G + EAR++FD++PE+ V+WN +IS++ G A L+ M
Sbjct: 168 KNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
Query: 93 LVEGVLPDAYTFSAIFKAFSELGLVRYGR-------RAHGLAVVLGLEVLDVFVASALVD 145
L +++ + + ++ R + +G++ + ++
Sbjct: 228 ----PLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWI------------TMIS 271
Query: 146 MYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR--VKPNE 203
Y K ++ A +F + +KD +++ A+IA Y Q+G +AL++F +M++R ++P+E
Sbjct: 272 GYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDE 331
Query: 204 YTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQ 263
TL+S +++ LG++ G + +I + G++ TSL+ +Y + + K+F+
Sbjct: 332 ITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSN 391
Query: 264 LAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG 323
L V++++ ++G NG A S+F MI + PN T + +L A S + + G
Sbjct: 392 LNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEG 451
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ +E + D ++++ G+ G +++A
Sbjct: 452 YKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEA 486
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 246/490 (50%), Gaps = 20/490 (4%)
Query: 103 TFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD----AHL 158
++ ++ A V+ + H L ++ GL + + S L+ + + A
Sbjct: 10 SWKSLILASQRCNTVKQIKSTHSLFIIHGLH-RNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV---DRRVKPNEYTLASTLASCGN 215
+FD + + ++ +I ++S L F MV + + P+ T + +C
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 216 LGDSVNGQLIHGFIVKSGLESFVAS---QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
G+ IH ++VK+G+ F++ QT +L +Y ++ D+ KVF+++ V W
Sbjct: 129 ACFFSVGKQIHCWVVKNGV--FLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKW 186
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA-ITT 331
+ G V+ G + VFREM+ + P+ F++++ L AC+ G+ IH +
Sbjct: 187 DVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKK 246
Query: 332 KLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQ 391
K +E + G AL+++Y KCG ++ A VF LT ++ S ++I YA G+ +A+
Sbjct: 247 KSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMT 306
Query: 392 LFKRIKKL-GLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDL 450
+R+++ G+ P+ V + +L AC + G +EEG + M+ + I EH++C++DL
Sbjct: 307 CLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDL 366
Query: 451 LGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG----D 505
+ R+ R ++A LI ++ P +W LLN CR H +E+ E ++ +L L G +
Sbjct: 367 MCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEE 426
Query: 506 GGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRA 565
+ L+N+Y S + + +++ I ++K+P S ++VD V F++GD+SHP
Sbjct: 427 EAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNL 486
Query: 566 HEIFDMLHEL 575
+I ++H L
Sbjct: 487 LQIHTVIHLL 496
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 186/389 (47%), Gaps = 27/389 (6%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF---SYCLLGHKLIDGYIKCGSVAE----ARK 56
+ SLI ++ +++ H+ I G +Y + KL+ ++ ++ + A
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAI--SKLLTAFLHLPNLNKHFHYASS 68
Query: 57 LFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE---GVLPDAYTFSAIFKAFSE 113
+FD + + +++MI + + + M+ E + P TF + A +
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 114 LGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTA 173
G++ H V G+ + D V + ++ +Y + + DA VFD + + DVV +
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 174 LIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFI-VKS 232
L+ GY + GL E LEVFREM+ + ++P+E+++ + L +C +G G+ IH F+ KS
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 233 GLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVF 292
+ES V T+L+ MY++C +E +V+VF +L + +W + + G G + A++
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 293 REMIR-CSVSPNPFTLSSILQACS-------SRAMREVGEQIHAITTKLGMEGNKDAGAA 344
+ R + P+ L +L AC+ R+M E E + IT K + +
Sbjct: 309 ERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPK------HEHYSC 362
Query: 345 LINLYGKCGNVDKARSVFDVLTELDLVSV 373
+++L + G +D A ++ + + L SV
Sbjct: 363 IVDLMCRAGRLDDALNLIEKMPMKPLASV 391
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 245/490 (50%), Gaps = 20/490 (4%)
Query: 103 TFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD----AHL 158
++ ++ A V+ + H L ++ GL + + S L+ + + A
Sbjct: 10 SWKSLILASQRCNTVKQIKSTHSLFIIHGLH-RNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV---DRRVKPNEYTLASTLASCGN 215
+FD + + ++ +I ++S L F MV + + P+ T + +C
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 216 LGDSVNGQLIHGFIVKSGLESFVAS---QTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
G+ IH ++VK+G+ F++ QT +L +Y ++ D+ KVF+++ V W
Sbjct: 129 ACFFSVGKQIHCWVVKNGV--FLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKW 186
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA-ITT 331
+ G V+ G + VF+EM+ + P+ F++++ L AC+ G+ IH +
Sbjct: 187 DVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKK 246
Query: 332 KLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQ 391
K +E + G AL+++Y KCG ++ A VF+ LT ++ S ++I YA G+ +A
Sbjct: 247 KRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATT 306
Query: 392 LFKRIKKL-GLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDL 450
RI++ G+ P+ V + +L AC + G +EEG + M+ + I EH++C++DL
Sbjct: 307 CLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDL 366
Query: 451 LGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG----D 505
+ R+ R ++A LI ++ P +W LLN CR H +E+ E ++ +L L G +
Sbjct: 367 MCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEE 426
Query: 506 GGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRA 565
+ L+N+Y S + + +++ I ++K+P S ++VD V F++GD+SHP
Sbjct: 427 EAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNL 486
Query: 566 HEIFDMLHEL 575
+I ++H L
Sbjct: 487 LQIHTLIHLL 496
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 181/383 (47%), Gaps = 15/383 (3%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF---SYCLLGHKLIDGYIKCGSVAE----ARK 56
+ SLI ++ +++ H+ I G +Y + KL+ ++ ++ + A
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAI--SKLLTAFLHLPNLNKHFHYASS 68
Query: 57 LFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE---GVLPDAYTFSAIFKAFSE 113
+FD + + +++MI + + + M+ E + P TF + A +
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 114 LGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTA 173
G++ H V G+ + D V + ++ +Y + + DA VFD + + DVV +
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 174 LIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKS- 232
L+ GY + GL E LEVF+EM+ R ++P+E+++ + L +C +G G+ IH F+ K
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 233 GLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVF 292
+ES V T+L+ MY++C +E +V+VF +L + +W + + G G + A +
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 293 REMIR-CSVSPNPFTLSSILQACSSRAMREVGE-QIHAITTKLGMEGNKDAGAALINLYG 350
+ R + P+ L +L AC+ E G + + + G+ + + +++L
Sbjct: 309 DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMC 368
Query: 351 KCGNVDKARSVFDVLTELDLVSV 373
+ G +D A + + + L SV
Sbjct: 369 RAGRLDDALDLIEKMPMKPLASV 391
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 215/444 (48%), Gaps = 79/444 (17%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
++D Y+K SV ARK+FD++ +R WN MIS + G ++A +L+ +M+ E
Sbjct: 142 IMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF-DMMPEN---- 196
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
DV + ++ +AK + +A F
Sbjct: 197 -----------------------------------DVVSWTVMITGFAKVKDLENARKYF 221
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
DR+ EK VV + A+++GYAQ+G +AL +F +M+ V+PNE T +++C D
Sbjct: 222 DRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH----------- 269
+ + I + + +T+LL M+++C ++ + ++FN+L +
Sbjct: 282 LTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGY 341
Query: 270 ---------------------VTWTSFVVGLVQNGREEVAVSVFREMIRCSVS-PNPFTL 307
V+W S + G NG+ +A+ F +MI S P+ T+
Sbjct: 342 TRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTM 401
Query: 308 SSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE 367
S+L AC A E+G+ I K ++ N +LI +Y + GN+ +A+ VFD + E
Sbjct: 402 ISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE 461
Query: 368 LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQL 427
D+VS N++ A+A NG G E L L ++K G+ P+ VT+ S+L ACN AGL++EG ++
Sbjct: 462 RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Query: 428 FAFMKNNHNIELTREHFTCMIDLL 451
F ++N +H+ CM DLL
Sbjct: 522 FKSIRNP-----LADHYACM-DLL 539
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 216/512 (42%), Gaps = 114/512 (22%)
Query: 55 RKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSEL 114
R +FD + ++ NSM + + LY G++PDA++F + K+
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 115 GLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTAL 174
G++ L LG D +V + ++DMY K + + A VFD++ ++ + +
Sbjct: 120 GIL-----FQALVEKLGF-FKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL 234
I+GY + G EA ++F M
Sbjct: 174 ISGYWKWGNKEEACKLFDMMP--------------------------------------- 194
Query: 235 ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFRE 294
E+ V S T ++T +++ +E++ K F+++ S V+W + + G QNG E A+ +F +
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 295 MIRCSVSPNPFTLSSILQACSSRA--------MREVGEQ--------------IHA---- 328
M+R V PN T ++ ACS RA ++ + E+ +HA
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD 314
Query: 329 ------ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQ 382
I +LG + N A+I+ Y + G++ AR +FD + + ++VS NS+I YA
Sbjct: 315 IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAH 374
Query: 383 NGFGYEALQLFKRIKKLGLA-PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTR 441
NG A++ F+ + G + P+ VT IS+L AC + +E G + +++ N I+L
Sbjct: 375 NGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ-IKLND 433
Query: 442 EHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTL----------------------- 478
+ +I + R EA + +E+ DVV + TL
Sbjct: 434 SGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDE 493
Query: 479 ------------LNACRIHGEIEMAEKIMRKV 498
L AC G ++ ++I + +
Sbjct: 494 GIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 48/231 (20%)
Query: 35 CLLGHKLIDGYIKCGSVAEARK--------------------------------LFDEMP 62
C + L+D + KC + AR+ LFD MP
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLPDAYTFSAIFKAFS-----ELG- 115
+R++V+WNS+I+ + +G++ A+E + +M+ G PD T ++ A ELG
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 116 -LVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTAL 174
+V Y R+ +++ D S L+ MYA+ + +A VFD + E+DVV + L
Sbjct: 419 CIVDYIRKNQ-------IKLNDSGYRS-LIFMYARGGNLWEAKRVFDEMKERDVVSYNTL 470
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLI 225
+A +G E L + +M D ++P+ T S L +C G GQ I
Sbjct: 471 FTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 200/389 (51%), Gaps = 39/389 (10%)
Query: 191 FREMVDRRVKPNEYTLASTLASCG--NLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMY 248
F EM R V P+ +T +C GD + +H ++ GL S + + +L+ +Y
Sbjct: 103 FVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVY 162
Query: 249 SRCSMVEDSVKVFNQ-------------------------------LAYASHVTWTSFVV 277
S + ++ ++++F++ + V+W S +
Sbjct: 163 SLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLIS 222
Query: 278 GLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEG 337
G Q A+ +F EM+ + P+ + S L AC+ + G+ IH T + +
Sbjct: 223 GYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI 282
Query: 338 NKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIK 397
+ L++ Y KCG +D A +F++ ++ L + N+MI A +G G + F+++
Sbjct: 283 DSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV 342
Query: 398 KLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRF 457
G+ P+GVTFIS+L+ C+++GLV+E LF M++ +++ +H+ CM DLLGR+
Sbjct: 343 SSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLI 402
Query: 458 EEAAMLINEV-----TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGTHILL 512
EEAA +I ++ ++ W LL CRIHG IE+AEK +V L+P DGG + ++
Sbjct: 403 EEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVM 462
Query: 513 TNLYASAGKWNQVIEMKTTI-RDLKLKKS 540
+YA+A +W +V++++ I RD K+KK+
Sbjct: 463 VEMYANAERWEEVVKVREIIDRDKKVKKN 491
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 1/177 (0%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
LIDG +K + AR+LFD MP R +V+WNS+IS + ++A++L+ M+ G+ PD
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
+ A ++ G + G+ H L +D F+A+ LVD YAK + A +F
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL-FIDSFLATGLVDFYAKCGFIDTAMEIF 307
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
+ +K + + A+I G A G ++ FR+MV +KP+ T S L C + G
Sbjct: 308 ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG 364
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
S ++ CA + +A+H + F L L+D Y KCG + A ++F+ ++
Sbjct: 254 STLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK 313
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
+ TWN+MI+ HG + V+ + M+ G+ PD TF ++ S GLV R
Sbjct: 314 TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEAR 370
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 206/413 (49%), Gaps = 35/413 (8%)
Query: 168 VVLFTALIAGYAQSGLDGEALEVFREMVDRRVKP-NEYTLASTLASCGNLGDSVNGQLIH 226
++ T ++ YA G +AL +F +M P + + + L SC V G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 227 GFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREE 286
VKS S +LL MY +C V + K+F+++ + V W + + G+ +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 287 VAVSVF---------------------------------REMIRCSVSPNPFTLSSILQA 313
AV ++ R+MI PN TL +++ A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 314 CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSV 373
CS+ + ++IH+ + +E + + L+ YG+CG++ + VFD + + D+V+
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 374 NSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKN 433
+S+I AYA +G AL+ F+ ++ + P+ + F+++L AC++AGL +E F M+
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 434 NHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAE 492
++ + +++H++C++D+L R RFEEA +I + P W LL ACR +GEIE+AE
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 493 KIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSW 545
R++L + P + ++LL +Y S G+ + ++ +++ +K SP SW
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 157/343 (45%), Gaps = 50/343 (14%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
+S + CA +VHAH + S F S +G L+D Y KC SV+ ARKLFDE+P
Sbjct: 51 FSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIP 110
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFK------------- 109
+R+ V WN+MIS + GK K+AVELY M V+P+ +F+AI K
Sbjct: 111 QRNAVVWNAMISHYTHCGKVKEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAI 167
Query: 110 -----------------------AFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDM 146
A S +G R + H A +E + S LV+
Sbjct: 168 EFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQ-LKSGLVEA 226
Query: 147 YAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTL 206
Y + + LVFD + ++DVV +++LI+ YA G AL+ F+EM +V P++
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 207 ASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ---TSLLTMYSRCSMVEDSVKVFNQ 263
+ L +C + G + + + F G AS+ + L+ + SR E++ KV
Sbjct: 287 LNVLKACSHAG--LADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQA 344
Query: 264 LA-YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP-NP 304
+ + TW + + G E+A RE++ V P NP
Sbjct: 345 MPEKPTAKTWGALLGACRNYGEIELAEIAARELLM--VEPENP 385
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 184/355 (51%), Gaps = 21/355 (5%)
Query: 325 QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNG 384
+I A + L + N L+ +Y CG ++A SVF+ ++E +L + +I +A+NG
Sbjct: 279 KISASVSHLDLSSNH----VLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNG 334
Query: 385 FGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF 444
FG +A+ +F R K+ G P+G F I AC G V+EG F M ++ I + E +
Sbjct: 335 FGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDY 394
Query: 445 TCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAP 503
++++ +EA + + P+V +W TL+N R+HG +E+ + V L P
Sbjct: 395 VSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Query: 504 GDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWV--DVDREVHTFMAGDMS 561
T + N + G I +K + D++ + RS + V + F AGD +
Sbjct: 455 ----TRL---NKQSREG----FIPVKAS--DVEKESLKKRSGILHGVKSSMQEFRAGDTN 501
Query: 562 HPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTC 621
P E+F +L L +GY +TR L D+ +E K + L HSE++A A A+ +
Sbjct: 502 LPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSA 561
Query: 622 GRTTAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
R + KNLRVC DCH+ +K ++ + GR++I RD KRFH K G C+CKDYW
Sbjct: 562 PR-KPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 11 CAHTKSLTTLRAVHAHVISSGFSYCLL--GHKLIDGYIKCGSVAEARKLFDEMPERHIVT 68
C + L + VH IS+ S+ L H L++ Y CG EA +F++M E+++ T
Sbjct: 264 CGEAEGLQEAKTVHGK-ISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLET 322
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG-------R 121
W +I +G + A++++ EG +PD F IF A LG V G
Sbjct: 323 WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMS 382
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYA 148
R +G+A + V +LV+MYA
Sbjct: 383 RDYGIAPSIEDYV-------SLVEMYA 402
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 219/412 (53%), Gaps = 4/412 (0%)
Query: 136 DVFVASALVDMYAKFDKMRDAHL-VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM 194
+V ++S LV Y+K + + L VF + +++ + +I +++SG +++++F M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 195 VDRR-VKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSM 253
V+P+++TL L +C ++ +G LIH +K G S + ++L+ MY
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 254 VEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA 313
+ + K+F+ + V +T+ G VQ G + +++FREM + + + S+L A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 314 CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSV 373
C + G+ +H + + G A+ ++Y KC +D A +VF ++ D++S
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 374 NSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKN 433
+S+I Y +G + +LF + K G+ PN VTF+ +L AC + GLVE+ F M+
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ- 363
Query: 434 NHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPDVVLWRTLLNACRIHGEIEMAE 492
+NI +H+ + D + R+ EEA + ++ PD + +L+ C+++G +E+ E
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 493 KIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARS 544
++ R+++QL P ++ L LY++AG++++ ++ +++ ++ K P S
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 3/292 (1%)
Query: 32 FSYCLLGHKLIDGYIKCGSV-AEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYG 90
+S +L KL+ Y K + + +F MP R+I +WN +I G + ++++L+
Sbjct: 63 YSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFL 122
Query: 91 NMLVEG-VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAK 149
M E V PD +T I +A S + G H L + LG +FV+SALV MY
Sbjct: 123 RMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSS-SLFVSSALVIMYVD 181
Query: 150 FDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLAST 209
K+ A +FD + +D VL+TA+ GY Q G L +FREM + + S
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 210 LASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH 269
L +CG LG +G+ +HG+ ++ + ++ MY +CS+++ + VF ++
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDV 301
Query: 270 VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
++W+S ++G +G ++ +F EM++ + PN T +L AC+ + E
Sbjct: 302 ISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVE 353
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 140/300 (46%), Gaps = 17/300 (5%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDEMPERH 65
++ C+ ++ + +H + GFS L + L+ Y+ G + ARKLFD+MP R
Sbjct: 140 ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRD 199
Query: 66 IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
V + +M +V G++ + ++ M G D+ ++ A +LG +++G+ HG
Sbjct: 200 SVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHG 259
Query: 126 LAV----VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
+ LGL + +A+ DMY K + AH VF + +DV+ +++LI GY
Sbjct: 260 WCIRRCSCLGLN-----LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGY--- 311
Query: 182 GLDGE---ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
GLDG+ + ++F EM+ ++PN T L++C + G L + + + +
Sbjct: 312 GLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPEL 371
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAY-ASHVTWTSFVVGLVQNGREEVAVSVFREMIR 297
S+ SR ++E++ K + + + G G EV V RE+I+
Sbjct: 372 KHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ 431
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 130/277 (46%), Gaps = 19/277 (6%)
Query: 234 LESFVASQTSLLTMYSRCS-MVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVF 292
L S V + L+ YS+ + + S+ VF + Y + +W + ++G ++ +F
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 293 REMIRCS-VSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGK 351
M R S V P+ FTL IL+ACS+ + G+ IH + KLG + +AL+ +Y
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 352 CGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISI 411
G + AR +FD + D V +M Y Q G L +F+ + G A + V +S+
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 412 LLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCM--------IDLLGRSKRFEEAAML 463
L+AC G ++ G K+ H + R +C+ D+ + + A +
Sbjct: 242 LMACGQLGALKHG-------KSVHGWCIRR--CSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 464 INEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
++ DV+ W +L+ + G++ M+ K+ ++L+
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLK 329
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 23/227 (10%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCL---LGHKLIDGYIKCGSVAEARKLFDEMP 62
SL+ C +L ++VH I CL LG+ + D Y+KC + A +F M
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRR--CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS 297
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR---- 118
R +++W+S+I + G + +L+ ML EG+ P+A TF + A + GLV
Sbjct: 298 RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWL 357
Query: 119 YGRRAHGLAVVLGLE----VLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTAL 174
Y R +V L+ V D + L++ KF + D ++ D + A+
Sbjct: 358 YFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLE--------DMPVKPDEAVMGAV 409
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEY--TLASTLASCGNLGDS 219
++G G V RE++ + + Y TLA ++ G ++
Sbjct: 410 LSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEA 456
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 185/344 (53%), Gaps = 20/344 (5%)
Query: 222 GQLIHGFIVKSGL--ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGL 279
G+++HG + K G ES + T+LL Y++ + + KVF+++ + VTW + + G
Sbjct: 130 GRIVHGMVKKLGFLYESELIG-TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 280 VQ-----NGREEVAVSVFREMIRCS--VSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
N A+ +FR C V P T+ +L A S + E+G +H K
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 333 LGMEGNKDA--GAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEAL 390
LG D G AL+++Y KCG ++ A SVF+++ ++ + SM A NG G E
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 391 QLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDL 450
L R+ + G+ PN +TF S+L A + GLVEEG +LF MK + EH+ C++DL
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 451 LGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGD---G 506
LG++ R +EA I + PD +L R+L NAC I+GE M E+I + +L++ D
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 507 GT----HILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWV 546
G+ ++ L+N+ A GKW +V +++ +++ ++K P S+V
Sbjct: 429 GSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 152/338 (44%), Gaps = 53/338 (15%)
Query: 21 RAVHAHVISSGFSYC--LLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVS 78
R VH V GF Y L+G L+ Y K G + ARK+FDEMPER VTWN+MI + S
Sbjct: 131 RIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCS 190
Query: 79 HG-----KSKQAVELYGNMLV--EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLG 131
H +++A+ L+ GV P T + A S+ GL+ G HG LG
Sbjct: 191 HKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLG 250
Query: 132 LEV-LDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEV 190
+DVF+ +ALVDMY+K + +A VF+ + K+V +T++ G A +G E +
Sbjct: 251 FTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNL 310
Query: 191 FREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSR 250
M + +KPNE T TSLL+ Y
Sbjct: 311 LNRMAESGIKPNEITF-----------------------------------TSLLSAYRH 335
Query: 251 CSMVEDSVKVFNQLAYASHVT-----WTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
+VE+ +++F + VT + V L + GR + A ++ ++ + P+
Sbjct: 336 IGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEA---YQFILAMPIKPDAI 392
Query: 306 TLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGA 343
L S+ ACS +GE+I ++ E K +G+
Sbjct: 393 LLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGS 430
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 165/375 (44%), Gaps = 26/375 (6%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKL-----F 58
+ SL+ Q ++K+L + +HA ++ +G L KLI Y S + KL F
Sbjct: 10 FLSLLQQ--NSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVF 67
Query: 59 DEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVL--PDAYTFSAIF---KAFSE 113
+N+++ K + ++ ++ N + L + TF + +
Sbjct: 68 PRFGHPDKFLFNTLLKC----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSAS 123
Query: 114 LGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTA 173
+R GR HG+ LG + + L+ YAK +R A VFD + E+ V + A
Sbjct: 124 SSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNA 183
Query: 174 LIAGYAQSGLDG-----EALEVFREM--VDRRVKPNEYTLASTLASCGNLGDSVNGQLIH 226
+I GY G +A+ +FR V+P + T+ L++ G G L+H
Sbjct: 184 MIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH 243
Query: 227 GFIVKSGL--ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGR 284
G+I K G E V T+L+ MYS+C + ++ VF + + TWTS GL NGR
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR 303
Query: 285 EEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG-EQIHAITTKLGMEGNKDAGA 343
++ M + PN T +S+L A + E G E ++ T+ G+ +
Sbjct: 304 GNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYG 363
Query: 344 ALINLYGKCGNVDKA 358
+++L GK G + +A
Sbjct: 364 CIVDLLGKAGRIQEA 378
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 244/503 (48%), Gaps = 47/503 (9%)
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD---AHLVFDRVLE 165
K+ SEL + H L + LGL + FV+ L ++ D A+ ++ +
Sbjct: 19 KSMSEL------YKIHTLLITLGLSEEEPFVSQTLS--FSALSSSGDVDYAYKFLSKLSD 70
Query: 166 KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLI 225
+ +I G++ S +++ V+ +M+ + P+ T + S L + G +
Sbjct: 71 PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL 130
Query: 226 HGFIVKSGLE--------------SF-----------------VASQTSLLTMYSRCSMV 254
H +VKSGLE SF + + S+L Y++ V
Sbjct: 131 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDV 190
Query: 255 EDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC-SVSPNPFTLSSILQA 313
+ VF++++ VTW+S + G V+ G A+ +F +M+R S N T+ S++ A
Sbjct: 191 VSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICA 250
Query: 314 CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF--DVLTELDLV 371
C+ G+ +H + + +LI++Y KCG++ A SVF + E D +
Sbjct: 251 CAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDAL 310
Query: 372 SVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM 431
N++I A +GF E+LQLF ++++ + P+ +TF+ +L AC++ GLV+E F +
Sbjct: 311 MWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL 370
Query: 432 KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEM 490
K + E EH+ CM+D+L R+ ++A I+E+ P + LLN C HG +E+
Sbjct: 371 KES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLEL 429
Query: 491 AEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDR 550
AE + +K+++L P + G ++ L N+YA ++ M+ + +KK S +D+D
Sbjct: 430 AETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDG 489
Query: 551 EVHTFMAGDMSHPRAHEIFDMLH 573
H F+A D +H + +I+ +L
Sbjct: 490 TRHRFIAHDKTHFHSDKIYAVLQ 512
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 192/431 (44%), Gaps = 44/431 (10%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSY--CLLGHKL-IDGYIKCGSVAEARKLFDEM 61
S L QC KS++ L +H +I+ G S + L G V A K ++
Sbjct: 12 SILRHQC---KSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKL 68
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
+ WN +I + ++++ +Y ML G+LPD T+ + K+ S L + G
Sbjct: 69 SDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGG 128
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAK----------FDKMR----------------- 154
H V GLE D+F+ + L+ MY FD+M
Sbjct: 129 SLHCSVVKSGLE-WDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKS 187
Query: 155 ----DAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR-RVKPNEYTLAST 209
A LVFD + E+DVV ++++I GY + G +ALE+F +M+ K NE T+ S
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 210 LASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY--A 267
+ +C +LG G+ +H +I+ L V QTSL+ MY++C + D+ VF + +
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET 307
Query: 268 SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIH 327
+ W + + GL +G ++ +F +M + P+ T +L ACS + +
Sbjct: 308 DALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFF 367
Query: 328 AITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGY 387
+ G E + A ++++ + G V A D ++E+ + SM+ A +
Sbjct: 368 KSLKESGAEPKSEHYACMVDVLSRAGLVKDAH---DFISEMPIKPTGSMLGALLNGCINH 424
Query: 388 EALQLFKRIKK 398
L+L + + K
Sbjct: 425 GNLELAETVGK 435
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 15/297 (5%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLP 99
++D Y K G V AR +FDEM ER +VTW+SMI +V G+ +A+E++ M+ G
Sbjct: 180 ILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKA 239
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
+ T ++ A + LG + G+ H + + L L V + ++L+DMYAK + DA V
Sbjct: 240 NEVTMVSVICACAHLGALNRGKTVHRYILDVHLP-LTVILQTSLIDMYAKCGSIGDAWSV 298
Query: 160 FDR--VLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
F R V E D +++ A+I G A G E+L++F +M + ++ P+E T LA+C + G
Sbjct: 299 FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG 358
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY-ASHVTWTSFV 276
+ +SG E ++ + SR +V+D+ +++ + + +
Sbjct: 359 LVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALL 418
Query: 277 VGLVQNGREEVAVSVFREMIRCSVS--------PNPFTLSSILQACSSRAMREVGEQ 325
G + +G E+A +V +++I N + ++ +A +R+MRE E+
Sbjct: 419 NGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRA--ARSMREAMEK 473
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 200/412 (48%), Gaps = 21/412 (5%)
Query: 267 ASHVTWTSFVVGLVQ-NGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQ 325
A +VT +F +Q N RE AV V + + + L + + C E
Sbjct: 83 AQNVTIETFDSLCIQGNWRE--AVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARV 140
Query: 326 IHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGF 385
+H L + A A+I +Y C +VD A VF+ + E + ++ M+ + NG+
Sbjct: 141 VHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGY 200
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT 445
G EA+ LF R K+ G PNG F + C G V+EG F M + I + EH+
Sbjct: 201 GEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYH 260
Query: 446 CMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPG 504
+ +L S +EA + + P V +W TL+N R+HG++E+ ++ V +L
Sbjct: 261 SVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL--- 317
Query: 505 DGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPR 564
T + + +SAG + T D K+ RS TF D SHP+
Sbjct: 318 -DATRL---DKVSSAGL------VATKASDFVKKEPSTRS---EPYFYSTFRPVDSSHPQ 364
Query: 565 AHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRT 624
+ I++ L L + K +GY PDTR+ + + ++ + E++A+ +L K+ R
Sbjct: 365 MNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPR- 423
Query: 625 TAIRIFKNLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
+AI + N+R+ GDCH +K ++++TGRD+I RD+K +H FK G+C C + W
Sbjct: 424 SAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 11 CAHTKSLTTLRAVHAHVISSGFSYCLLGHK--LIDGYIKCGSVAEARKLFDEMPERHIVT 68
C ++L R VH +I+ S C +G + +I+ Y C SV +A K+F+EMPE + T
Sbjct: 129 CGKPEALEAARVVHECIIAL-VSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGT 187
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
M+ V++G ++A++L+ EG P+ F+ +F + G V+ G
Sbjct: 188 LCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEG 239
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 210/419 (50%), Gaps = 43/419 (10%)
Query: 166 KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL-ASCGNLGDSVNGQL 224
K ++ LI Y +G +L +F M+ V+PN T S + A+C + S G
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSY-GVA 107
Query: 225 IHGFIVKSGL--ESFVASQTSLLTMYSRCSMVEDSVKVFN-------------------- 262
+HG +K G + FV QTS + Y +E S K+F+
Sbjct: 108 LHGQALKRGFLWDPFV--QTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRN 165
Query: 263 -QLAYASH----------VTWTSFVVGLVQNGREEVAVSVFREMI---RCSVSPNPFTLS 308
++ YA V+WT+ + G + G A+ VF EMI R ++PN T
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 309 SILQACSS--RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
S+L +C++ + +G+QIH + G AL+++YGK G+++ A ++FD +
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 367 ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQ 426
+ + + N++I A A NG +AL++F+ +K + PNG+T ++IL AC + LV+ G Q
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQ 345
Query: 427 LFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIH 485
LF+ + + + I T EH+ C++DL+GR+ +AA I + PD + LL AC+IH
Sbjct: 346 LFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIH 405
Query: 486 GEIEMAEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARS 544
E+ + ++++ L P G ++ L+ A W++ +M+ + + ++K PA S
Sbjct: 406 ENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 165/349 (47%), Gaps = 39/349 (11%)
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
+N++I ++++ G+ K ++ L+ +ML V P+ TF ++ KA V YG HG A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK---------------------- 166
G + D FV ++ V Y + + + +FD +L
Sbjct: 114 KRGF-LWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 167 ---------DVVLFTALIAGYAQSGLDGEALEVFREMVDRR---VKPNEYTLASTLASCG 214
DVV +T +I G+++ GL +AL VF EM+ + PNE T S L+SC
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 215 NL--GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
N G G+ IHG+++ + T+LL MY + +E ++ +F+Q+ W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI-HAITT 331
+ + L NGR + A+ +F M V PN TL +IL AC+ + ++G Q+ +I +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 332 KLGMEGNKDAGAALINLYGKCG-NVDKARSVFDVLTELDLVSVNSMIYA 379
+ + + +++L G+ G VD A + + E D + +++ A
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGA 401
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-- 96
+ L+D + G + A + F MP +V+W ++I+ G +A+ ++G M+
Sbjct: 156 NSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERA 215
Query: 97 -VLPDAYTFSAIFKAFSEL--GLVRYGRRAHGLAVVLGLEVLDVFVASALV-DMYAKFDK 152
+ P+ TF ++ + + G +R G++ HG V+ E++ + DMY K
Sbjct: 216 VITPNEATFVSVLSSCANFDQGGIRLGKQIHGY--VMSKEIILTTTLGTALLDMYGKAGD 273
Query: 153 MRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
+ A +FD++ +K V + A+I+ A +G +ALE+F M V PN TL + L +
Sbjct: 274 LEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTA 333
Query: 213 CG 214
C
Sbjct: 334 CA 335
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 43 DGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAY 102
D Y K G + A +FD++ ++ + WN++ISA S+G+ KQA+E++ M V P+
Sbjct: 266 DMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGI 325
Query: 103 TFSAIFKAFSELGLVRYG 120
T AI A + LV G
Sbjct: 326 TLLAILTACARSKLVDLG 343
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 193/422 (45%), Gaps = 35/422 (8%)
Query: 172 TALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVK 231
+ Y S +AL + +++ P+ YT S ++ +G++ HG +K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 232 SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNG-------- 283
G + + Q SL+ MY+ C ++ + K+F ++ V+W S + G+V+NG
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 284 -----------------------REEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMR 320
V++S+FREM+R N TL +L AC A
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 321 EVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAY 380
+ G +HA + + + ALI++YGKC V AR +FD L+ + V+ N MI A+
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 381 AQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELT 440
+G L+LF+ + L P+ VTF+ +L C AGLV +G ++ M + I+
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 441 REHFTCMIDLLGRSKRFEEA----AMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMR 496
H CM +L + EEA L +E P+ W LL++ R G + E I +
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 497 KVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFM 556
+++ P + + LL N+Y+ G+W V ++ +++ K+ + P VD+ VH
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLR 506
Query: 557 AG 558
G
Sbjct: 507 LG 508
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 177/390 (45%), Gaps = 36/390 (9%)
Query: 14 TKSLTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSM 72
+ S+T L VHA +I+SG F +L+ + G + ++ + + + N +
Sbjct: 32 SNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCA--NPV 89
Query: 73 ISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGL 132
A++ KQA+ Y ++L G +PD+YTF ++ + V G+ HG A+ G
Sbjct: 90 FKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGC 149
Query: 133 EVLDVFVASALVDMYAKFDKM------------RD-------------------AHLVFD 161
+ + + V ++L+ MY + RD AH +FD
Sbjct: 150 DQV-LPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 162 RVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN 221
+ +K+++ + +I+ Y + G ++ +FREMV + NE TL L +CG
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 222 GQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQ 281
G+ +H ++++ L S V T+L+ MY +C V + ++F+ L+ + VTW ++
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 282 NGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITT-KLGMEGNKD 340
+GR E + +F MI + P+ T +L C+ + G+ +++ + ++ N
Sbjct: 329 HGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFG 388
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDL 370
+ NLY G ++A L + D+
Sbjct: 389 HQWCMANLYSSAGFPEEAEEALKNLPDEDV 418
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 15/276 (5%)
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA--YASHVTWTSFVVGLVQN 282
+H ++ SG + LL SR +V ++ + Y ++ + +++V +
Sbjct: 41 VHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCANPVFKAYLV----S 96
Query: 283 GREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAG 342
+ A+ + +++R P+ +T S++ + G+ H K G +
Sbjct: 97 SSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQ 156
Query: 343 AALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
+L+++Y CG +D A+ +F + + D+VS NS+I +NG A +LF + +
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 403 PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA-- 460
+ IS L NN G+ LF M + +++ GRS R +E
Sbjct: 217 SWNI-MISAYLGANNPGV---SISLFREMV-RAGFQGNESTLVLLLNACGRSARLKEGRS 271
Query: 461 --AMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKI 494
A LI N VV+ L++ E+ +A +I
Sbjct: 272 VHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRI 307
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 179/356 (50%), Gaps = 43/356 (12%)
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNG------- 283
K G ES V QT+L+ MY + D+ KVF+++ + VTW + GL G
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 284 ------------------------REEVAVSVFREMIRC-SVSPNPFTLSSILQACSSRA 318
+ + A+ +F M+ C ++ PN T+ +IL A +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 319 MREVGEQIHAITTKLG-MEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL-----DLVS 372
++ +HA K G + + +LI+ Y KCG + +S F E+ +LVS
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCI---QSAFKFFIEIPNGRKNLVS 327
Query: 373 VNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEG-CQLFAFM 431
+MI A+A +G G EA+ +FK +++LGL PN VT IS+L AC++ GL EE + F M
Sbjct: 328 WTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Query: 432 KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLWRTLLNACRIHGEIEM 490
N + I +H+ C++D+L R R EEA + E+ V+WR LL AC ++ + E+
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 447
Query: 491 AEKIMRKVLQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWV 546
AE++ RK+++L GG ++L++N++ G++ + + + K P S V
Sbjct: 448 AERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 177/411 (43%), Gaps = 83/411 (20%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK--------LIDGYIKCGSVAE-- 53
+ SL+ + + +L + +H+H +SGF LL H+ L + ++C S+ E
Sbjct: 39 FQSLMQK--YESNLKIIHQLHSHFTTSGF---LLLHQKQNSGKLFLFNPLLRCYSLGETP 93
Query: 54 --ARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP--DAYTFSAIFK 109
A L+D++ H ++ H KS LP D++T+ + K
Sbjct: 94 LHAYFLYDQLQRLHFLS---------DHNKS---------------LPPFDSFTYLFLLK 129
Query: 110 AFSELGLVRYGRRAHGLAVV--LGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKD 167
A S + LG E V+V +ALV MY M DAH VFD + E++
Sbjct: 130 ASSNPRFPSLLLGIGLHGLTLKLGFES-HVYVQTALVGMYLVGGNMIDAHKVFDEMPERN 188
Query: 168 -------------------------------VVLFTALIAGYAQSGLDGEALEVFREMVD 196
VV +T +I GYA+ EA+ +F MV
Sbjct: 189 PVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVA 248
Query: 197 -RRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG-LESFVASQTSLLTMYSRCSMV 254
+KPNE T+ + L + NLGD +H ++ K G + + SL+ Y++C +
Sbjct: 249 CDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCI 308
Query: 255 EDSVKVFNQLAYASH--VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQ 312
+ + K F ++ V+WT+ + +G + AVS+F++M R + PN T+ S+L
Sbjct: 309 QSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLN 368
Query: 313 ACS--SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSV 361
ACS A E E + + + + + L+++ + G +++A +
Sbjct: 369 ACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 22 AVHAHVISSGFSYC--LLGHKLIDGYIKCGSVAEARKLFDEMP--ERHIVTWNSMISAHV 77
+VHA+V GF C + + LID Y KCG + A K F E+P +++V+W +MISA
Sbjct: 277 SVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFA 336
Query: 78 SHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL-D 136
HG K+AV ++ +M G+ P+ T ++ A S GL +V ++ D
Sbjct: 337 IHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPD 396
Query: 137 VFVASALVDMYAKFDKMRDAH-LVFDRVLEKDVVLFTALIAGYAQSGLDGEALE-VFREM 194
V LVDM + ++ +A + + +E+ V++ L+ G D E E V R++
Sbjct: 397 VKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL-GACSVYDDAELAERVTRKL 455
Query: 195 VD-RRVKPNEYTLASTLASCG 214
++ R +Y L S + CG
Sbjct: 456 MELERSHGGDYVLMSNIF-CG 475
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 192/407 (47%), Gaps = 41/407 (10%)
Query: 99 PDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHL 158
P+A F FS+L + H L D + L+ + + F + + A L
Sbjct: 21 PEASYFLRTCSNFSQLKQIHTKIIKHNLTN-------DQLLVRQLISVSSSFGETQYASL 73
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVF-REMVDRRVKPNEYTLASTLASCGNLG 217
VF+++ + +I + + EAL +F M+ + + +++T + +C
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRC-------------------------- 251
G +HG +K+G + V Q +L+ +Y +C
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 252 -----SMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFT 306
S ++ + VFNQ+ + V+WT+ + V+N R + A +FR M V PN FT
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 307 LSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
+ ++LQA + +G +H K G + G ALI++Y KCG++ AR VFDV+
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 367 ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG-LAPNGVTFISILLACNNAGLVEEGC 425
L + NSMI + +G G EAL LF+ +++ + P+ +TF+ +L AC N G V++G
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGL 373
Query: 426 QLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV-TNPD 471
+ F M + I REH CMI LL ++ E+A+ L+ + ++PD
Sbjct: 374 RYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFD--- 59
+ +I C + S+ VH I +GF + + L+D Y KCG RK+FD
Sbjct: 122 FPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMP 181
Query: 60 ----------------------------EMPERHIVTWNSMISAHVSHGKSKQAVELYGN 91
+MP R++V+W +MI+A+V + + +A +L+
Sbjct: 182 GRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRR 241
Query: 92 MLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFD 151
M V+ V P+ +T + +A ++LG + GR H A G VLD F+ +AL+DMY+K
Sbjct: 242 MQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGF-VLDCFLGTALIDMYSKCG 300
Query: 152 KMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDR-RVKPNEYTLASTL 210
++DA VFD + K + + ++I G EAL +F EM + V+P+ T L
Sbjct: 301 SLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVL 360
Query: 211 ASCGNLGDSVNG 222
++C N G+ +G
Sbjct: 361 SACANTGNVKDG 372
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 132/309 (42%), Gaps = 36/309 (11%)
Query: 210 LASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH 269
L +C N + IH I+K L + L+++ S + + VFNQL S
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 270 VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP-NPFTLSSILQACSSRAMREVGEQIHA 328
TW + L N + A+ +F M+ S + FT +++AC + + +G Q+H
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 329 ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL------------------TELD- 369
+ K G + L++LY KCG D R VFD + ++LD
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 370 ------------LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNN 417
+VS +MI AY +N EA QLF+R++ + PN T +++L A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 418 AGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRT 477
G + G + + N + L T +ID+ + ++A + + + + W +
Sbjct: 264 LGSLSMGRWVHDYAHKNGFV-LDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 478 LLNACRIHG 486
++ + +HG
Sbjct: 323 MITSLGVHG 331
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLFDEMPER 64
+L+ SL+ R VH + +GF C LG LID Y KCGS+ +ARK+FD M +
Sbjct: 256 NLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGK 315
Query: 65 HIVTWNSMISAHVSHGKSKQAVELYGNMLVEG-VLPDAYTFSAIFKAFSELGLVRYGRR 122
+ TWNSMI++ HG ++A+ L+ M E V PDA TF + A + G V+ G R
Sbjct: 316 SLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLR 374
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 167/338 (49%), Gaps = 21/338 (6%)
Query: 344 ALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAP 403
+I +Y C + D A +VF+ + + + + +MI A+NG G A+ +F R + G P
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 404 NGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAML 463
+ F ++ AC + G + EG F M ++ + L+ E + +I++L +EA
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 464 INEVT-NPDVVLWRTLLNACRIHGEIEMAEKIMR--KVLQLAPGDGGTHILLTNLYASAG 520
+ +T P V +W TL+N C + G +E+ ++ K L + ++ L AS
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDS 327
Query: 521 KWNQVIEMK--TTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEK 578
++ E++ IRD D + +H F AGD SH F L +
Sbjct: 328 AMEKLKELRYCQMIRD------------DPKKRMHEFRAGDTSHLGTVSAF---RSLKVQ 372
Query: 579 AKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFKNLRVCGD 638
+G+ P TR + EE+K L + S KLA A A+ + R + + +N+R C D
Sbjct: 373 MLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARR-PLTVLQNMRTCID 431
Query: 639 CHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
H+ K ++L+TGR +I RD K++H +K G+CSCKDYW
Sbjct: 432 GHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 11 CAHTKSLTTLRAVHAHVIS-SGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTW 69
C ++L R VH + SY H +I+ Y C S +A +F+EMP+R+ TW
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSY----HTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 70 NSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+MI +G+ ++A++++ + EG PD F A+F A +G + G
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG 228
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 9/184 (4%)
Query: 186 EALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLL 245
EALEV + D+ + L CG + +++H I S+ +++
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSY----HTVI 150
Query: 246 TMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPF 305
MYS C +D++ VFN++ + TW + + L +NG E A+ +F I P+
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 306 TLSSILQACSSRAMREVGE---QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF 362
++ AC S + ++ E ++ GM + + +I + CG++D+A
Sbjct: 211 IFKAVFFACVS--IGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFV 268
Query: 363 DVLT 366
+ +T
Sbjct: 269 ERMT 272
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 199/460 (43%), Gaps = 96/460 (20%)
Query: 21 RAVHAHVISSGF-SYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSH 79
R +H +V GF S L + L+ Y S+ +A K+FDEMP+ +++WNS++S +V
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 80 GKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFV 139
G+ ++ + L+ + V P+ ++F+A A + L L G H V LGLE +V V
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 140 ASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSG-----------LDGEAL 188
+ L+DMY K M DA LVF + EKD V + A++A +++G +
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDT 254
Query: 189 EVFREMVDRRVK--------------PN-------------------------------- 202
+ E++D VK PN
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS 314
Query: 203 -----EYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDS 257
EY+L+ LA+ L G LIH K GL+S V ++L+ MYS+C M++ +
Sbjct: 315 GVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHA 374
Query: 258 VKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS-VSPNPFTLSSILQACSS 316
+F + + + W + G +NG A+ +F ++ + + P+ FT ++L CS
Sbjct: 375 ELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSH 434
Query: 317 RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSM 376
++ ME +IN Y +V+ S+
Sbjct: 435 --------------CEVPMEVMLGYFEMMINEYRIKPSVEHC---------------CSL 465
Query: 377 IYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN 416
I A Q G ++A Q+ I++ G +GV + ++L AC+
Sbjct: 466 IRAMGQRGEVWQAKQV---IQEFGFGYDGVAWRALLGACS 502
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 156/327 (47%), Gaps = 20/327 (6%)
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
++ ++ A+ G G L E+++ KP+ L L GN G + +HG++
Sbjct: 24 WSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVS 290
K G S SL+ Y +ED+ KVF+++ ++W S V G VQ+GR + +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 291 VFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGME-GNKDAGAALINLY 349
+F E+ R V PN F+ ++ L AC+ + +G IH+ KLG+E GN G LI++Y
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMY 202
Query: 350 GKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFI 409
GKCG +D A VF + E D VS N+++ + ++NG L F ++ P+ VT+
Sbjct: 203 GKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYN 258
Query: 410 SILLACNNAGLVEEGCQLFAFMKNNH------------NIELTREHFTCMIDLLGRSKRF 457
++ A +G Q+ + M N + N E + E + RF
Sbjct: 259 ELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRF 318
Query: 458 EEAAMLINEVTNPDVVL--WRTLLNAC 482
+E ++ I + + W +L++AC
Sbjct: 319 DEYSLSIVLAAVAALAVVPWGSLIHAC 345
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/528 (22%), Positives = 219/528 (41%), Gaps = 70/528 (13%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMP 62
Y++LIT C V + ++GFSY + + L+D Y K EA K+ +EM
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 63 ----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
IVT+NS+ISA+ G +A+EL M +G PD +T++ + F G V
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV----LEKDVVLFTAL 174
G + ++ +A + MY K + +FD + L D+V + L
Sbjct: 402 SAMSIFEEMRNAGCKP-NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL 234
+A + Q+G+D E VF+EM P T + +++ G ++ ++ +G+
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 235 ESFVASQTSLLTMYSRCSMVEDSVKVF----------NQLAYAS--HVTWTSFVVGLVQN 282
+++ ++L +R M E S KV N+L Y S H +GL+ +
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 283 GREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAG 342
EEV V + P L +++ CS + E+ + + G +
Sbjct: 581 LAEEVYSGV--------IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 343 AALINLYGKCGNVDKARSVFDVLTE----------------------------------- 367
+++++YG+ V KA V D + E
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 368 ----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
D++S N++IYAY +N +A ++F ++ G+ P+ +T+ + + + + EE
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEE 752
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPD 471
+ +M H + + ++D + R +EA + + ++ N D
Sbjct: 753 AIGVVRYMI-KHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 171/406 (42%), Gaps = 54/406 (13%)
Query: 31 GFSYCLLGH-KLIDGYIKCGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKS-KQ 84
GFS + + LI + G EA +F +M E ++T+N +++ G +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 85 AVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALV 144
L M +G+ PDAYT++ + L + + G D +AL+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS-YDKVTYNALL 321
Query: 145 DMYAKFDKMRDAHLVFDRVL----EKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVK 200
D+Y K + ++A V + ++ +V + +LI+ YA+ G+ EA+E+ +M ++ K
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 201 PNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKV 260
P+ +T + L+ G + I + +G + + + + + MY + +K+
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 261 FNQLAY----ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSS 316
F+++ VTW + + QNG + VF+EM R P T ++
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT------- 494
Query: 317 RAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVF----DVLTELDLVS 372
LI+ Y +CG+ ++A +V+ D DL +
Sbjct: 495 ----------------------------LISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 373 VNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNA 418
N+++ A A+ G ++ ++ ++ PN +T+ S+L A N
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Query: 572 LHELIEKAKTLGYSPDTRFVLQDLHEEKKMSSLYYHSEKLAIAFALWKTCGRTTAIRIFK 631
L L ++ + GY P+T++VL D+ EE K +L +HSE+LAIAF + T TT IR+ K
Sbjct: 136 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTT-IRVMK 194
Query: 632 NLRVCGDCHSWIKFVTLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
NLR+CGDCH++IK ++ + R+II RD+KRFHHF+ G CSC DYW
Sbjct: 195 NLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 189/396 (47%), Gaps = 35/396 (8%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVE-GVLP 99
L++G K G V A+ LF +P+ IV +N++I V+HG+ A + +M+ G++P
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL----------DVFVASALVDMYAK 149
D T++++ + + GLV GLA LEVL +V+ + LVD + K
Sbjct: 388 DVCTYNSLIYGYWKEGLV-------GLA----LEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 150 FDKMRDAHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYT 205
K+ +A+ V + + L+ + V F LI+ + + EA+E+FREM + KP+ YT
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 206 LASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA 265
S ++ + + + + ++ G+ + + +L+ + R ++++ K+ N++
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 266 YA----SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
+ +T+ S + GL + G + A S+F +M+R +P+ + + ++ M E
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 322 VGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT----ELDLVSVNSMI 377
+ G + +LIN + G ++ ++F L D V+ N+++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 378 YAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
+ GF Y+A L + G PN T+ SILL
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTW-SILL 711
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 214/491 (43%), Gaps = 38/491 (7%)
Query: 16 SLTTLRAVHAH-VISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEM------PERHIVT 68
+L+ LR + H + + Y L H L KC V EA +L +EM P+ T
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLS----KCNRVNEALQLLEEMFLMGCVPDAE--T 289
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
+N +I + +A ++ ML+ G PD T+ + GL + GR +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN-----GLCKIGRVDAAKDL 344
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE-----KDVVLFTALIAGYAQSGL 183
+ ++ + + L+ + ++ DA V ++ DV + +LI GY + GL
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 184 DGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
G ALEV +M ++ KPN Y+ + LG + + GL+
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 244 LLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCS 299
L++ + + + ++V++F ++ T+ S + GL + + A+ + R+MI
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 300 VSPNPFTLSSILQACSSRA-MREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
V N T ++++ A R ++E + ++ + + G ++ +LI + G VDKA
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ-GSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 359 RSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
RS+F+ + +S N +I ++G EA++ K + G P+ VTF S++
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 415 CNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN----P 470
AG +E+G +F ++ I F ++ L + +A +L++E P
Sbjct: 644 LCRAGRIEDGLTMFRKLQ-AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 471 DVVLWRTLLNA 481
+ W LL +
Sbjct: 703 NHRTWSILLQS 713
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 117/533 (21%), Positives = 214/533 (40%), Gaps = 108/533 (20%)
Query: 45 YIKCGSVAEARKLFDEMP-----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP 99
Y K G + +L EM E ++N ++ VS K A ++ +ML + P
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 100 DAYTFSAIFKAF-------SELGLVR-------------YGRRAHGLA------------ 127
+TF + KAF S L L+R Y H L+
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 128 -----------------VVLGLEVLDVFVASA--------------------LVDMYAKF 150
V+LGL D +A L++ K
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 151 DKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR-VKPNEYTLAST 209
++ A +F R+ + ++V+F LI G+ G +A V +MV + P+ T S
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 210 LASCGNLGDSVNG---QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA- 265
+ G + + G +++H K G + V S T L+ + + ++++ V N+++
Sbjct: 396 IY--GYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 266 ---YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREV 322
+ V + + + R AV +FREM R P+ +T +S++ + EV
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS-----GLCEV 507
Query: 323 GEQIHAI-----TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL----TELDLVSV 373
E HA+ G+ N LIN + + G + +AR + + + + LD ++
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 374 NSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM-- 431
NS+I + G +A LF+++ + G AP+ ++ ++ +G+VEE + M
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 432 KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLIN----EVTNPDVVLWRTLLN 480
+ + +T F +I+ L R+ R E+ + E PD V + TL++
Sbjct: 628 RGSTPDIVT---FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 13/252 (5%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPER----HIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
LI + K + EA ++F EMP + + T+NS+IS + K A+ L +M+ EG
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
V+ + T++ + AF G ++ R+ V G LD ++L+ + ++ A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAGEVDKA 583
Query: 157 HLVFDRVLE----KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
+F+++L + LI G +SG+ EA+E +EMV R P+ T S +
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YAS 268
G +G + + G+ + +L++ + V D+ + ++ +
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 269 HVTWTSFVVGLV 280
H TW+ + ++
Sbjct: 704 HRTWSILLQSII 715
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 228/493 (46%), Gaps = 35/493 (7%)
Query: 57 LFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGL 116
+ D P ++VT+ ++I+ G+ +A +L+ M G+ PD +S + + + G+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 117 VRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVL----EKDVVLFT 172
+ G + A+ G++ LDV V S+ +D+Y K + A +V+ R+L +VV +T
Sbjct: 337 LGMGHKLFSQALHKGVK-LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 173 ALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL---ASCGNLGDSVNGQLIHGFI 229
LI G Q G EA ++ +++ R ++P+ T +S + CGNL +G ++ +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR---SGFALYEDM 452
Query: 230 VKSGLESFVASQTSLLTMYSRCSM----VEDSVKVFNQLAYASHVTWTSFVVGLVQNGRE 285
+K G V L+ S+ + + SVK+ Q + V + S + G + R
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 286 EVAVSVFREMIRCSVSPNPFTLS-----SILQACSSRAMRE-VGEQIHAITTKLGMEGNK 339
+ A+ VFR M + P+ T + SI++ + M+ +G Q+ + + + +
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 340 DAGAALINLYGKCGNVDKARSVFDVLT----ELDLVSVNSMIYAYAQNGFGYEALQLFKR 395
+I+L KC ++ A F+ L E D+V+ N+MI Y EA ++F+
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 396 IKKLGLAPNGVTF-ISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRS 454
+K PN VT I I + C N + + ++F+ M + + + C++D +S
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDM-DGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKS 690
Query: 455 KRFEEAAMLINEV----TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVL--QLAPGDGGT 508
E + L E+ +P +V + +++ G ++ A I + + +L P D
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP-DVVA 749
Query: 509 HILLTNLYASAGK 521
+ +L Y G+
Sbjct: 750 YAILIRGYCKVGR 762
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 229/519 (44%), Gaps = 58/519 (11%)
Query: 57 LFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGL 116
+ D P ++VT+ ++I+ G+ +A +L+ M G+ PD +S + + + G+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 117 VRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVL----EKDVVLFT 172
+ G + A+ G++ LDV V S+ +D+Y K + A +V+ R+L +VV +T
Sbjct: 337 LGMGHKLFSQALHKGVK-LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 173 ALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL---ASCGNL------------- 216
LI G Q G EA ++ +++ R ++P+ T +S + CGNL
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 217 --------------GDSVNGQLIHG--FIVKSGLESF---VASQTSLLTMYSRCSMVEDS 257
G S G ++H F VK +S V SL+ + R + +++
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 258 VKVFNQLAY----ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA 313
+KVF + T+T+ + + GR E A+ +F M + + P+ +++ A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 314 CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT----ELD 369
+G Q+ + + + + +I+L KC ++ A F+ L E D
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 370 LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTF-ISILLACNNAGLVEEGCQLF 428
+V+ N+MI Y EA ++F+ +K PN VT I I + C N + + ++F
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM-DGAIRMF 694
Query: 429 AFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV----TNPDVVLWRTLLNACRI 484
+ M + + + C++D +S E + L E+ +P +V + +++
Sbjct: 695 SIMAEKGS-KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 485 HGEIEMAEKIMRKVL--QLAPGDGGTHILLTNLYASAGK 521
G ++ A I + + +L P D + +L Y G+
Sbjct: 754 RGRVDEATNIFHQAIDAKLLP-DVVAYAILIRGYCKVGR 791
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 181/387 (46%), Gaps = 29/387 (7%)
Query: 48 CGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYT 103
C A A +F E PE ++ ++N +I G+ K+A L M ++G PD +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 104 FSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV 163
+S + + G + + + GL+ + ++ +++ + + K+ +A F +
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKP-NSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 164 LEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
+ + D V++T LI G+ + G A + F EM R + P+ T + ++ +GD
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 220 VN-GQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA----SHVTWTS 274
V G+L H K GLE + T L+ Y + ++D+ +V N + A + VT+T+
Sbjct: 403 VEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 275 FVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSS----RAMREVGEQIHAI 329
+ GL + G + A + EM + + PN FT +SI+ C S A++ VGE A
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA- 520
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL----TELDLVSVNSMIYAYAQNGF 385
G+ + L++ Y K G +DKA+ + + + +V+ N ++ + +G
Sbjct: 521 ----GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISIL 412
+ +L + G+APN TF S++
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 203/485 (41%), Gaps = 44/485 (9%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEM------ 61
I + H L L+ VIS +++GY + G + + KL + M
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYS--------TVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
P +I + S+I K +A E + M+ +G+LPD ++ + F + G +R
Sbjct: 314 PNSYI--YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 122 R----AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA----HLVFDRVLEKDVVLFTA 173
+ H + DV +A++ + + M +A H +F + LE D V FT
Sbjct: 372 KFFYEMHSRDITP-----DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 174 LIAGYAQSGLDGEALEVFREMVDRRVKPN---EYTLASTLASCGNLGDSVNGQLIHGFIV 230
LI GY ++G +A V M+ PN TL L G+L DS N +L+H +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL-DSAN-ELLHE-MW 483
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA----SHVTWTSFVVGLVQNGREE 286
K GL+ + + S++ + +E++VK+ + A VT+T+ + ++G +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 287 VAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALI 346
A + +EM+ + P T + ++ M E GE++ G+ N +L+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 347 NLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
Y N+ A +++ + D + +++ + + EA LF+ +K G +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 403 PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAM 462
+ T+ ++ E ++F M+ + +E F D + KR +
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMR-REGLAADKEIFDFFSDTKYKGKRPDTIVD 722
Query: 463 LINEV 467
I+E+
Sbjct: 723 PIDEI 727
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 182/428 (42%), Gaps = 31/428 (7%)
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAH----GLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
D F F+ + GL+R RR +VL ++ +V++ D Y K
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY----KTAT 229
Query: 156 AHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
A +VF E +V + +I Q G EA + M + P+ + ++ +
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YA 267
G+ + + + GL+ S++ + R + ++ + F+++
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 268 SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQI 326
V +T+ + G + G A F EM ++P+ T ++I+ C M E G+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 327 HAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL----DLVSVNSMIYAYAQ 382
H + K G+E + LIN Y K G++ A V + + + ++V+ ++I +
Sbjct: 410 HEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 383 NGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFA-FMKNNHNIELTR 441
G A +L + K+GL PN T+ SI+ +G +EE +L F N +
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 442 EHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRTLLNACRIHGEIEMAEKIMRK 497
+T ++D +S ++A ++ E+ P +V + L+N +HG +E EK++
Sbjct: 529 --YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 498 VLQ--LAP 503
+L +AP
Sbjct: 587 MLAKGIAP 594
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 181/387 (46%), Gaps = 29/387 (7%)
Query: 48 CGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYT 103
C A A +F E PE ++ ++N +I G+ K+A L M ++G PD +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 104 FSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV 163
+S + + G + + + GL+ + ++ +++ + + K+ +A F +
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKP-NSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 164 LEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
+ + D V++T LI G+ + G A + F EM R + P+ T + ++ +GD
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 220 VN-GQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA----SHVTWTS 274
V G+L H K GLE + T L+ Y + ++D+ +V N + A + VT+T+
Sbjct: 403 VEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 275 FVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSS----RAMREVGEQIHAI 329
+ GL + G + A + EM + + PN FT +SI+ C S A++ VGE A
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA- 520
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL----TELDLVSVNSMIYAYAQNGF 385
G+ + L++ Y K G +DKA+ + + + +V+ N ++ + +G
Sbjct: 521 ----GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISIL 412
+ +L + G+APN TF S++
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 203/485 (41%), Gaps = 44/485 (9%)
Query: 8 ITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEM------ 61
I + H L L+ VIS +++GY + G + + KL + M
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYS--------TVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
P +I + S+I K +A E + M+ +G+LPD ++ + F + G +R
Sbjct: 314 PNSYI--YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 122 R----AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA----HLVFDRVLEKDVVLFTA 173
+ H + DV +A++ + + M +A H +F + LE D V FT
Sbjct: 372 KFFYEMHSRDITP-----DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 174 LIAGYAQSGLDGEALEVFREMVDRRVKPN---EYTLASTLASCGNLGDSVNGQLIHGFIV 230
LI GY ++G +A V M+ PN TL L G+L DS N +L+H +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL-DSAN-ELLHE-MW 483
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA----SHVTWTSFVVGLVQNGREE 286
K GL+ + + S++ + +E++VK+ + A VT+T+ + ++G +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 287 VAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALI 346
A + +EM+ + P T + ++ M E GE++ G+ N +L+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 347 NLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
Y N+ A +++ + D + +++ + + EA LF+ +K G +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 403 PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAM 462
+ T+ ++ E ++F M+ + +E F D + KR +
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMR-REGLAADKEIFDFFSDTKYKGKRPDTIVD 722
Query: 463 LINEV 467
I+E+
Sbjct: 723 PIDEI 727
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 182/428 (42%), Gaps = 31/428 (7%)
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAH----GLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
D F F+ + GL+R RR +VL ++ +V++ D Y K
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY----KTAT 229
Query: 156 AHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
A +VF E +V + +I Q G EA + M + P+ + ++ +
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YA 267
G+ + + + GL+ S++ + R + ++ + F+++
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 268 SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQI 326
V +T+ + G + G A F EM ++P+ T ++I+ C M E G+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 327 HAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL----DLVSVNSMIYAYAQ 382
H + K G+E + LIN Y K G++ A V + + + ++V+ ++I +
Sbjct: 410 HEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 383 NGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFA-FMKNNHNIELTR 441
G A +L + K+GL PN T+ SI+ +G +EE +L F N +
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 442 EHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRTLLNACRIHGEIEMAEKIMRK 497
+T ++D +S ++A ++ E+ P +V + L+N +HG +E EK++
Sbjct: 529 --YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 498 VLQ--LAP 503
+L +AP
Sbjct: 587 MLAKGIAP 594
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 205/452 (45%), Gaps = 26/452 (5%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLG-HKLIDGYIKCGSVAEARKLFDEM- 61
Y+ LI L AV ++ G+ ++ L++GY ++EA L D+M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 62 ---PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
+ + VT+N++I H K+ +AV L M+ G PD +T+ + GL +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN-----GLCK 232
Query: 119 YGRRAHGLAVVLGLEV----LDVFVASALVDMYAKFDKMRDAHLVF----DRVLEKDVVL 170
G L+++ +E DV + + ++D + + DA +F ++ + +VV
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
+ +LI G +A + +M++R++ PN T ++ + + G V + ++ ++
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL----AYASHVTWTSFVVGLVQNGREE 286
K ++ + + +SL+ + ++++ +F + + + VT+ + + G + R E
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 287 VAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALI 346
+ +FREM + + N T ++++Q ++ ++I G+ + + L+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 347 NLYGKCGNVDKARSVFDVLT----ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
+ K G ++KA VF+ L E D+ + N MI + G + LF + G+
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 403 PNGVTFISILLACNNAGLVEEGCQLFAFMKNN 434
PN + + +++ GL EE LF MK +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 152/340 (44%), Gaps = 38/340 (11%)
Query: 46 IKC----GSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEGV 97
I+C G ++A +L +M ER I VT++++I A V GK +A +LY M+ +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 98 LPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL-DVFVASALVDMYAKFDKMRDA 156
PD +T+S++ F R H +++ + +V + L+ + K ++ +
Sbjct: 357 DPDIFTYSSLINGFCMHD--RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 157 HLVF----DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
+F R L + V + LI G Q+G A ++F++MV V P+ T + L
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----AS 268
G ++ ++ KS +E + + ++ + VED +F L+ +
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 269 HVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA 328
+ +T+ + G + G +E A ++FREM PN T +++++A +R
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA----RLR-------- 582
Query: 329 ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL 368
+G+K A A LI CG V A ++ V+ L
Sbjct: 583 -------DGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/459 (19%), Positives = 195/459 (42%), Gaps = 51/459 (11%)
Query: 81 KSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELG----LVRYGRRAHGLAV-------- 128
K AV+L+G M+ LP F+ + A +++ ++ G R L +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 129 ------------VLGLEVL----------DVFVASALVDMYAKFDKMRDAHLVFDRVL-- 164
L L VL D+ S+L++ Y ++ +A + D++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 165 --EKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNG 222
+ + V F LI G EA+ + MV R +P+ +T + + GD
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 223 QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL----AYASHVTWTSFVVG 278
+ + K +E+ V T+++ V D++ +F ++ + VT+ S +
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 279 LVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGN 338
L GR A + +MI ++PN T S+++ A E+++ K ++ +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 339 KDAGAALINLYGKCGNVDKARSVFDVLTELD----LVSVNSMIYAYAQNGFGYEALQLFK 394
++LIN + +D+A+ +F+++ D +V+ N++I + + E ++LF+
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 395 RIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRS 454
+ + GL N VT+ +++ AG + ++F M ++ + ++ ++D L +
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKY 478
Query: 455 KRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIE 489
+ E+A ++ + PD+ + ++ G++E
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 46/279 (16%)
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH----VTWTSFVVGLV 280
+ G ++K G E + + +SLL Y + ++V + +Q+ + VT+ + + GL
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
+ + AV++ M+ P+ FT +++ R G+ D
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR-------------------GDID 237
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
+L+ ++K + E D+V ++I A +AL LF + G
Sbjct: 238 LALSLLK------KMEKGK------IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFM---KNNHNIELTREHFTCMIDLLGRSKRF 457
+ PN VT+ S++ N G + +L + M K N N+ F+ +ID + +
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV----TFSALIDAFVKEGKL 341
Query: 458 EEAAMLINEVT----NPDVVLWRTLLNACRIHGEIEMAE 492
EA L +E+ +PD+ + +L+N +H ++ A+
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 211/491 (42%), Gaps = 78/491 (15%)
Query: 2 NFY--SSLITQCAHTKSLTTLRAVHAHVISSGFSY-CLLGHKLIDGYIKCGSVAEARKLF 58
N Y S +I C + L+ + +I G+ + LI+G G V+EA +L
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 59 DEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSEL 114
D M E ++T N++++ +GK AV L M+ G P+ T+ + K
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV---- 221
Query: 115 GLVRYGRRAHGLAVVLGLE----VLDVFVASALVDMYAKFDKMRDAHLVFDRV----LEK 166
+ + G+ A + ++ +E LD S ++D K + +A +F+ + +
Sbjct: 222 -MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 167 DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIH 226
D++++T LI G+ +G + ++ R+M+ R++ P+ ++ + G + +H
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 227 GFIVKSGLESFVASQTSLL-----------------------------------TMYSRC 251
+++ G+ + TSL+ Y +
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 252 SMVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTL 307
++++D +++F +++ A VT+ + + G + G+ EVA +F+EM+ V P+ +
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 308 SSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE 367
+L E +I K ME D G I ++G C N K +D+
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKME--LDIGIYNIIIHGMC-NASKVDDAWDLFCS 517
Query: 368 L-------DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL------- 413
L D+ + N MI + G EA LF+++++ G +PNG T+ +IL+
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY-NILIRAHLGEG 576
Query: 414 -ACNNAGLVEE 423
A +A L+EE
Sbjct: 577 DATKSAKLIEE 587
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/555 (19%), Positives = 232/555 (41%), Gaps = 68/555 (12%)
Query: 53 EARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIF 108
+A LF EM P ++ ++ + S + ++L M ++G+ + YT S +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE--- 165
+ A G + LG E D S L++ ++ +A + DR++E
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEP-DTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 166 -KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQL 224
++ AL+ G +G +A+ + MV+ +PNE T L G +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLV 280
+ + + ++ + ++ + ++++ +FN++ A + +T+ + G
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
GR + + R+MI+ ++P+ S+++ E++H + G+ +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRI 396
+LI+ + K +DKA + D++ ++ + N +I Y + + L+LF+++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 397 KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKR 456
G+ + VT+ + L++ C+L +E+ +E F M+ S+R
Sbjct: 414 SLRGVVADTVTYNT---------LIQGFCEL-------GKLEVAKELFQEMV-----SRR 452
Query: 457 FEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMA----EKIMRKVLQLAPGDGGTHILL 512
PD+V ++ LL+ +GE E A EKI + ++L D G + ++
Sbjct: 453 -----------VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL---DIGIYNII 498
Query: 513 TNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDML 572
+ +A K + ++ ++ P + V D + + M G + + D+L
Sbjct: 499 IHGMCNASKVDDAWDLFCSL--------PLKG-VKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 573 HELIEKAKTLGYSPD 587
+E+ G+SP+
Sbjct: 550 FRKMEED---GHSPN 561
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 150/342 (43%), Gaps = 35/342 (10%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
LI G+ G + KL +M +R I V ++++I V GK ++A EL+ M+ G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
+ PD T++++ F + + L V G ++ + L++ Y K + + D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDG 406
Query: 157 HLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
+F ++ + D V + LI G+ + G A E+F+EMV RRV+P+ + L
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----AS 268
+ G+ I I KS +E + ++ S V+D+ +F L
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 269 HVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA 328
T+ + GL + G A +FR+M SPN T + +++A
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA--------------- 571
Query: 329 ITTKLGMEGNKDAGAALINLYGKCG-NVDKA--RSVFDVLTE 367
LG EG+ A LI +CG +VD + + V D+L++
Sbjct: 572 ---HLG-EGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 208/491 (42%), Gaps = 71/491 (14%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLG-HKLIDGYIKCGSVAEARKLFDEM- 61
YS LI L AV ++ G+ ++ L++GY ++EA L D+M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 62 ---PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFK--------- 109
+ + VT+N++I H K+ +A+ L M+ +G PD T+ +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 110 -AFSELGLVRYGRRAHGL----AVVLGL-------EVLDVF-------------VASALV 144
AF+ L + G+ G+ ++ GL + L++F S+L+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 145 DMYAKFDKMRDAHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVK 200
+ + DA + ++E+ DV F+ALI + + G EA +++ EMV R +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 201 PNEYTLASTLASCGNLGDSVNGQLIHG----------FIVKSGLESFVASQTSLLTMYSR 250
P+ T +S +NG +H F+V V + +L+ + +
Sbjct: 359 PSIVTYSSL----------INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 251 CSMVEDSVKVFNQLA----YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFT 306
VE+ ++VF +++ + VT+ + GL Q G ++A +F+EM+ V PN T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 307 LSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
+++L E + + ME +I K G V+ +F L+
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 367 ----ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+ D+V+ N+MI + + G EA LFK +K+ G PN + +++ A G E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 423 EGCQLFAFMKN 433
+L M++
Sbjct: 589 ASAELIKEMRS 599
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 143/334 (42%), Gaps = 43/334 (12%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
LID ++K G + EA KL+DEM +R I VT++S+I+ H + +A +++ M+ +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
PD T++ + K F +Y R G+ V F +M
Sbjct: 392 CFPDVVTYNTLIKGF-----CKYKRVEEGMEV---------------------FREMSQR 425
Query: 157 HLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNL 216
LV + V + LI G Q+G A E+F+EMV V PN T + L
Sbjct: 426 GLV------GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 217 GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTW 272
G ++ ++ +S +E + + ++ + VED +F L+ V +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
+ + G + G +E A ++F+EM PN +++++A RE ++
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Query: 333 LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
G G+ + N+ G +DK S D+L+
Sbjct: 600 CGFAGDASTIGLVTNMLHD-GRLDK--SFLDMLS 630
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/457 (19%), Positives = 199/457 (43%), Gaps = 22/457 (4%)
Query: 53 EARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIF 108
+A LF EM P I+ ++ ++SA K + L M G+ + YT+S +
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVL---- 164
F + G + LG E ++ S+L++ Y ++ +A + D++
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEP-NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 165 EKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQL 224
+ + V F LI G EA+ + MV + +P+ T + GD+
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLV 280
+ + + LE V +++ + ++D++ +F ++ + VT++S + L
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
GR A + +MI ++P+ FT S+++ A E+++ K ++ +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRI 396
++LIN + +D+A+ +F+ + D+V+ N++I + + E +++F+ +
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 397 KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKR 456
+ GL N VT+ ++ AG + ++F M ++ + + ++D L ++ +
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGK 481
Query: 457 FEEAAMLINEVT----NPDVVLWRTLLNACRIHGEIE 489
E+A ++ + P + + ++ G++E
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 176/439 (40%), Gaps = 86/439 (19%)
Query: 77 VSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELG----LVRYGRRAHGLAVVLGL 132
+S K AV L+G M+ P FS + A +++ ++ G + L +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH-- 114
Query: 133 EVLDVFVASALVDMYAKFDKMRDAHLVFDRVL----EKDVVLFTALIAGYAQSGLDGEAL 188
+ + S L++ + + ++ A V +++ E ++V ++L+ GY S EA+
Sbjct: 115 ---NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 189 EVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMY 248
+ +M +PN T + LIHG + + + + +
Sbjct: 172 ALVDQMFVTGYQPNTVTFNT---------------LIHGLFLHN-------KASEAMALI 209
Query: 249 SRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLS 308
R MV + VT+ V GL + G ++A ++ +M + + P +
Sbjct: 210 DR--MVAKGCQ-------PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 309 SILQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL---YGKCGNVDKARSVFDV 364
+I+ C + M + + TK G+ N ++LI+ YG+ D +R + D+
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWS--DASRLLSDM 317
Query: 365 L---TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
+ D+ + +++I A+ + G EA +L+ + K + P+ VT+ S++ +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNA 481
+E Q+F FM + H C PDVV + TL+
Sbjct: 378 DEAKQMFEFMVSKH----------CF----------------------PDVVTYNTLIKG 405
Query: 482 CRIHGEIEMAEKIMRKVLQ 500
+ +E ++ R++ Q
Sbjct: 406 FCKYKRVEEGMEVFREMSQ 424
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 202/472 (42%), Gaps = 53/472 (11%)
Query: 49 GSVAEARKLFDEMPERHIV----TWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTF 104
G ++EA L +M E+ I T+N ++S H G + A+E Y + G+ PD T
Sbjct: 354 GHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTH 413
Query: 105 SAIFKAFSELGLV-----------RYGRR--AHGLAVVLGLEV----------------L 135
A+ + +V R R H + V++ + V L
Sbjct: 414 RAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL 473
Query: 136 DVFVAS----ALVDMYAKFDKMRDAHLVF--DRVL---EKDVVLFTALIAGYAQSGLDGE 186
D ++S A++D+YA+ +A VF R + DV+ + +I Y ++ L +
Sbjct: 474 DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEK 533
Query: 187 ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLT 246
AL +F+ M ++ P+E T S + Q I ++ SG + + +++
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 247 MYSRCSMVEDSVKVFNQL----AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSP 302
Y R ++ D+V ++ + + V + S + G ++G E A+ FR M V
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 303 NPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAA--LINLYGKCGNVDKARS 360
N L+S+++A S E +++ EG D A+ +++L G V +A S
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKD--SEGGPDVAASNSMLSLCADLGIVSEAES 711
Query: 361 VFDVLTE---LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNN 417
+F+ L E D++S +M+Y Y G EA+++ + +++ GL + +F ++
Sbjct: 712 IFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAA 771
Query: 418 AGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN 469
G + E C+LF M + L F + LL + EA + N
Sbjct: 772 DGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYN 823
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/446 (20%), Positives = 175/446 (39%), Gaps = 83/446 (18%)
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
F LI Y ++G +A +F EM+ V + T + + +CG G + + +
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YASHVTWTSFVVGLVQNGREE 286
+ G+ + LL++++ +E +++ + ++ + VT + + L Q
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 287 VAVSVFREMIRCSVSPNPFTLSSILQ-------ACSSRAM-------------------- 319
+V EM R S+ + ++ I+Q ++A+
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVID 487
Query: 320 --REVGEQIHAITT---KLGMEGNKD---AGAALINLYGKCGNVDKA------------- 358
E G + A T K M G ++ +I YGK +KA
Sbjct: 488 VYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTW 547
Query: 359 ------RSVFDVLTELDLV--------------------SVNSMIYAYAQNGFGYEALQL 392
S+F +L +DLV + +MI +Y + G +A+ L
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDL 607
Query: 393 FKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLG 452
++ ++K G+ PN V + S++ +G+VEE Q F M+ H ++ T +I
Sbjct: 608 YEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMME-EHGVQSNHIVLTSLIKAYS 666
Query: 453 RSKRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAPGDGGT 508
+ EEA + +++ + PDV ++L+ C G + AE I + + D +
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVIS 726
Query: 509 HILLTNLYASAGKWNQVIEMKTTIRD 534
+ LY G ++ IE+ +R+
Sbjct: 727 FATMMYLYKGMGMLDEAIEVAEEMRE 752
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 172/391 (43%), Gaps = 20/391 (5%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK----LIDGYIKCGSVAEARKLFD 59
Y+SL A + + + A ++ SG C G K +I Y++ G +++A L++
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSG---CKPGCKTYAAMIASYVRLGLLSDAVDLYE 609
Query: 60 EMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELG 115
M + + V + S+I+ G ++A++ + M GV + +++ KA+S++G
Sbjct: 610 AMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVG 669
Query: 116 LVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK---DVVLFT 172
+ RR + + DV +++++ + A + +A +F+ + EK DV+ F
Sbjct: 670 CLEEARRVYD-KMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFA 728
Query: 173 ALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGD-SVNGQLIHGFIVK 231
++ Y G+ EA+EV EM + + + + +A G S +L H +V+
Sbjct: 729 TMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVE 788
Query: 232 SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY--ASHVTWTSFVVGLVQN-GREEVA 288
L + +L T+ + + ++V Q AY A + + L G A
Sbjct: 789 RKLLLDWGTFKTLFTLLKKGGVPSEAVSQL-QTAYNEAKPLATPAITATLFSAMGLYAYA 847
Query: 289 VSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
+ +E+ + F ++++ S+ ++ + + + G+E + A L+ +
Sbjct: 848 LESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGI 907
Query: 349 YGKCGNVDKARSVFDVLTELDLVSVNSMIYA 379
YGK G V+ + V LT +L S+ A
Sbjct: 908 YGKAGMVEGVKRVHSRLTFGELEPSQSLFKA 938
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/542 (21%), Positives = 235/542 (43%), Gaps = 70/542 (12%)
Query: 27 VISSGFSYCLLGHKLIDGYIKC----GSVAEARKLFDEMPERH----IVTWNSMISAHVS 78
V+SS L H++I+ +++ + A KL D++P + + + +++ A+
Sbjct: 163 VLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSR 222
Query: 79 HGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVL---GLEVL 135
GK ++A++L+ M G P T++ I F ++G R R+ G+ + GL+
Sbjct: 223 TGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG--RSWRKILGVLDEMRSKGLK-F 279
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVF 191
D F S ++ A+ +R+A F + E V + AL+ + ++G+ EAL V
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 192 REMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRC 251
+EM + + T +A+ G S + + K G+ + T+++ Y +
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 252 SMVEDSVKVFNQLAYASHV----TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTL 307
++++K+F + A V T+ + + L + R + + +M SPN T
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 308 SSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE 367
+++L C ++ M + ++ G E ++D LI+ YG+CG+ A ++ +T
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 368 LD----LVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG---- 419
+ + N+++ A A+ G + +K G P ++ S++L C G
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY-SLMLQCYAKGGNYL 578
Query: 420 -------LVEEGCQLF-----------------AFMKNNHNIELTREH--------FTCM 447
++EG Q+F A + L ++H F M
Sbjct: 579 GIERIENRIKEG-QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 448 IDLLGRSKRFEEAAMLINEVT----NPDVVLWRTLLNACRIHGEIEMAEKIMRKV--LQL 501
+ + R+ +++A ++ + +PD+V + +L++ GE AE+I++ + QL
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQL 697
Query: 502 AP 503
P
Sbjct: 698 KP 699
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 42/353 (11%)
Query: 165 EKDVVLFTALIAGYAQSG---LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVN 221
E+ V LF L+ + SG LD + +E+F ++ R ++Y++A+ L
Sbjct: 153 ERAVFLFEWLVLS-SNSGALKLDHQVIEIFVRILGRE---SQYSVAAKL----------- 197
Query: 222 GQLIHGFIVKSGLESF---VASQTSLLTMYSRCSMVEDSVKVFNQL----AYASHVTWTS 274
+ K L+ + V + T++L YSR E ++ +F ++ + VT+
Sbjct: 198 -------LDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNV 250
Query: 275 FVVGLVQNGRE-EVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKL 333
+ + GR + V EM + + FT S++L AC+ + ++ A
Sbjct: 251 ILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC 310
Query: 334 GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEA 389
G E AL+ ++GK G +A SV + E D V+ N ++ AY + GF EA
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 390 LQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMID 449
+ + + K G+ PN +T+ +++ A AG +E +LF MK + T + ++
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC-TYNAVLS 429
Query: 450 LLGRSKRFEEA-AMLINEVTN---PDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
LLG+ R E ML + +N P+ W T+L C G + ++ R++
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/452 (19%), Positives = 199/452 (44%), Gaps = 34/452 (7%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMPE 63
S++++ CA L + A + S G+ + + L+ + K G EA + EM E
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 64 RHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRY 119
VT+N +++A+V G SK+A + M +GV+P+A T++ + A+ +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYG-----KA 399
Query: 120 GRRAHGLAVVLGLE----VLDVFVASALVDMYAKFDKMRDAHLVFDRVL--------EKD 167
G+ L + ++ V + +A++ + K K R ++ ++L +
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK--KSRSNEMI--KMLCDMKSNGCSPN 455
Query: 168 VVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHG 227
+ ++A G+D VFREM +P+ T + +++ G G V+ ++G
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 228 FIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL---AYASHVTWTSFVVGLVQNGR 284
+ ++G + V + +LL +R V + + + T S ++ G
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Query: 285 EEVAVSVFREMIR-CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGA 343
+ + I+ + P+ L ++L A E+ + K G + +
Sbjct: 576 NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 635
Query: 344 ALINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKL 399
++++++ + D+A + + + E DLV+ NS++ Y + G ++A ++ K ++K
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 400 GLAPNGVTFISILLACNNAGLVEEGCQLFAFM 431
L P+ V++ +++ GL++E ++ + M
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 170/387 (43%), Gaps = 16/387 (4%)
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
E IVT+ S+I+ + ++A+ + M+ G+ PD ++ I + + G V Y
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 123 AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF----DRVLEKDVVLFTALIAGY 178
G+ DV + ++LV+ + RDA + R ++ DV+ F ALI +
Sbjct: 199 LFDQMENYGIRP-DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
+ G +A E++ EM+ + PN +T S + G + + + G V
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREEVAVSVFRE 294
+ TSL+ + +C V+D++K+F +++ + +T+T+ + G Q G+ VA VF
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 295 MIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEG-NKDAGAALINLYGKC- 352
M+ V PN T + +L + I K M+G + + L+G C
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 353 -GNVDKARSVFDVLTELDLVSVNSMIYAYAQN----GFGYEALQLFKRIKKLGLAPNGVT 407
G ++KA VF+ + + ++ Q G A+ LF + G+ PN VT
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 408 FISILLACNNAGLVEEGCQLFAFMKNN 434
+ +++ GL E LF MK +
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 167/379 (44%), Gaps = 53/379 (13%)
Query: 53 EARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIF 108
EA LF M P I+ + +++ K + L ++ + GV D YT + +
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE--- 165
F + G + LG E D+ ++L++ + ++M +A + ++++E
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEP-DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 166 -KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPN--EYT-LASTLASCGNLGDSVN 221
DVV++T +I ++G AL +F +M + ++P+ YT L + L + G D+
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA-- 231
Query: 222 GQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQ 281
L+ G M + +K +T+ + + V+
Sbjct: 232 DSLLRG-------------------------MTKRKIK-------PDVITFNALIDAFVK 259
Query: 282 NGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNKD 340
G+ A ++ EMIR S++PN FT +S++ C + E + + + TK G +
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVV 318
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDL----VSVNSMIYAYAQNGFGYEALQLFKRI 396
A +LIN + KC VD A +F +++ L ++ ++I + Q G A ++F +
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 397 KKLGLAPNGVTFISILLAC 415
G+ PN T+ ++LL C
Sbjct: 379 VSRGVPPNIRTY-NVLLHC 396
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++G G +A L M +R I +T+N++I A V GK A ELY M+
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
+ P+ +T++++ F G V R+ L G DV ++L++ + K K+ DA
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC-FPDVVAYTSLINGFCKCKKVDDA 336
Query: 157 HLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
+F + +K + + +T LI G+ Q G A EVF MV R V PN T + L
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY-NVLLH 395
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTW 272
C L + VK L F ED K ++ + W
Sbjct: 396 C----------LCYNGKVKKALMIF-----------------EDMQK--REMDGVAPNIW 426
Query: 273 TSFVV--GLVQNGREEVAVSVFREM 295
T V+ GL NG+ E A+ VF +M
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDM 451
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/531 (21%), Positives = 242/531 (45%), Gaps = 53/531 (9%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLG-HKLIDGYIKCGSVAEARKLFDEMP 62
YS I L+ AV A ++ G+ ++ L++GY +++A L D+M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 63 E----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
E T+ ++I H K+ +AV L M+ G PD T+ + GL +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN-----GLCK 235
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G D+ +A +L+ K +K + +E DVV++ +I G
Sbjct: 236 RG---------------DIDLALSLL---KKMEKGK---------IEADVVIYNTIIDGL 268
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
+ +AL +F EM ++ ++P+ +T +S ++ N G + + +++ + V
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYAS----HVTWTSFVVGLVQNGREEVAVSVFRE 294
+ ++L+ + + + ++ K+++++ S T++S + G + R + A +F
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 295 MIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
MI PN T S++++ C ++ + E G ++ ++ G+ GN LI+ + +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEE-GMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 354 NVDKARSVFDVLTEL----DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFI 409
+ D A+ VF + + ++++ N ++ +NG +A+ +F+ +++ + P+ T+
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 410 SILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN 469
++ AG VE+G +LF + + + + MI R EEA L+ ++
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 470 ----PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA-PGDGGTHILLTNL 515
P+ + TL+ A G+ E + ++++++ GD T L+TN+
Sbjct: 567 DGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 111/521 (21%), Positives = 229/521 (43%), Gaps = 70/521 (13%)
Query: 51 VAEARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSA 106
V +A LF +M P IV +N ++SA K + + L M G+ D YT+S
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 107 IFKAFSELGLVRYGRRAHGLAVV-----LGLEVLDVFVASALVDMYAKFDKMRDAHLVFD 161
F R + + LAV+ LG E D+ S+L++ Y ++ DA + D
Sbjct: 124 FINCF-----CRRSQLSLALAVLAKMMKLGYEP-DIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 162 RVLE----KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
+++E D FT LI G EA+ + +MV R +P+ T + + G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL----AYASHVTWT 273
D + + K +E+ V +++ + ++D++ +F ++ T++
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 274 SFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKL 333
S + L GR A + +MI ++PN T S+++ A E+++ K
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 334 GMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELD----LVSVNSMIYAYAQNGFGYEA 389
++ + ++LIN + +D+A+ +F+++ D +V+ +++I + + E
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 390 LQLFKRIKKLGLAPNGVTFISILLA------CNNA------------------------G 419
++LF+ + + GL N VT+ +++ C+NA G
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 420 LVEEG-----CQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NP 470
L + G +F +++ + +E + MI+ + ++ + E+ L ++ +P
Sbjct: 478 LCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 471 DVVLWRTLLNA-CRIHGEIEMAEKIMRKVLQLAP-GDGGTH 509
+V+ + T+++ CR G E A+ +++K+ + P + GT+
Sbjct: 537 NVIAYNTMISGFCR-KGSKEEADSLLKKMKEDGPLPNSGTY 576
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 147/331 (44%), Gaps = 18/331 (5%)
Query: 49 GSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTF 104
G ++A +L +M ER I VT++++I A V GK +A +LY M+ + PD +T+
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 105 SAIFKAFSELGLVRYGRRAHGLAVVLGLEVL-DVFVASALVDMYAKFDKMRDAHLVF--- 160
S++ F R H +++ + +V S L+ + K ++ + +F
Sbjct: 367 SSLINGFCMHD--RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 161 -DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
R L + V +T LI G+ Q+ A VF++MV V PN T L G
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSF 275
++ ++ +S +E + + ++ + VED ++F L+ + + + +
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
+ G + G +E A S+ ++M PN T +++++A RE ++ G
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLT 366
G+ + N+ G +DK S D+L+
Sbjct: 605 AGDASTIGLVTNMLHD-GRLDK--SFLDMLS 632
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 185/426 (43%), Gaps = 66/426 (15%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
LI+G G V+EA +L D M E ++T N++++ GK +A+ L M+ G
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLE----VLDVFVASALVDMYAKFDK 152
P+A T+ + + + G+ A + ++ +E LD S ++D K
Sbjct: 224 CQPNAVTYGPVLNV-----MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 153 MRDAHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYT--- 205
+ +A +F+ + + +++ + LI G+ +G + ++ R+M+ R++ PN T
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 206 LASTLASCGNL--GDSVNGQLIH---------------GF---------------IVKSG 233
L + G L + ++ ++IH GF +V G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREEVAV 289
+ + + L+ Y + + ++D +++F +++ A VT+ + + G + G+ VA
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 290 SVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLY 349
+F+EM+ V PN T +L E +I K ME D G I ++
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME--LDIGIYNIIIH 516
Query: 350 GKCGNVDKARSVFDVLTELDLVSV-------NSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
G C N K +D+ L L V N MI + G EA LF+++++ G A
Sbjct: 517 GMC-NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 403 PNGVTF 408
P+G T+
Sbjct: 576 PDGWTY 581
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 13/285 (4%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
LI G+ G + KL +M +R I VT++ +I + V GK ++A EL+ M+ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
+ PD T++++ F + + + L V G + ++ + L++ Y K +++ D
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP-NIRTFNILINGYCKANRIDDG 422
Query: 157 HLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
+F ++ + D V + LI G+ + G A E+F+EMV R+V PN T L
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----AS 268
+ G+S I I KS +E + ++ S V+D+ +F L
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 269 HVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA 313
T+ + GL + G A +FR+M +P+ +T + +++A
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/462 (19%), Positives = 194/462 (41%), Gaps = 49/462 (10%)
Query: 53 EARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIF 108
+A LF +M P ++ ++ + SA + + L M ++G+ + YT S +
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE--- 165
F + A G + LG E + S L++ ++ +A + DR++E
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEP-NTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 166 -KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQL 224
D++ L+ G SG + EA+ + +MV+ +PN T L G +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLV 280
+ + + ++ + ++ + ++++ +FN++ + +T+ + G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
GR + + R+MI+ ++PN T S ++ + E++H G+ +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 341 AGAALINLYGKCGNVDKARSVFDVLT----ELDLVSVNSMIYAYAQNGFGYEALQLFKRI 396
+LI+ + K ++DKA + D++ + ++ + N +I Y + + L+LF+++
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 397 KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKR 456
G+ + VT+ +++ G E G K N EL +E
Sbjct: 430 SLRGVVADTVTYNTLI-----QGFCELG-------KLNVAKELFQE-------------- 463
Query: 457 FEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
+++ P++V ++ LL+ +GE E A +I K+
Sbjct: 464 ------MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 122/261 (46%), Gaps = 19/261 (7%)
Query: 255 EDSVKVFNQLAYA----SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSI 310
+D++ +F + ++ + + ++ + + + ++ +++ ++M ++ N +TLS +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 311 LQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKC--GNVDKARSVFDVLTE 367
+ C R + + I KLG E N + LIN G C G V +A + D + E
Sbjct: 130 INCFCRCRKLCLAFSAMGKII-KLGYEPNTITFSTLIN--GLCLEGRVSEALELVDRMVE 186
Query: 368 L----DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
+ DL+++N+++ +G EA+ L ++ + G PN VT+ +L +G
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV----TNPDVVLWRTLL 479
+L M+ NI+L ++ +ID L + + A L NE+ +++ + L+
Sbjct: 247 AMELLRKME-ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 480 NACRIHGEIEMAEKIMRKVLQ 500
G + K++R +++
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIK 326
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 198/454 (43%), Gaps = 64/454 (14%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLG-HKLIDGYIKCGSVAEARKLFDEMP 62
YS I L+ A+ ++ G+ ++ + L++G+ ++EA L D+M
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 63 E----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
E VT+ +++ H K+ +AV L M+V+G PD T+ A+ GL +
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN-----GLCK 227
Query: 119 YGRRAHGLAVVLGLEV----LDVFVASALVDMYAKFDKMRDAHLVFDRV----LEKDVVL 170
G L ++ +E DV + + ++D K+ M DA +F+++ ++ DV
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
+ LI+ G +A + +M+++ + P+ + + + G V + ++ +V
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 231 KSG--LESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YASHVTWTSFVVGLVQNGR 284
KS VA T L+ + + VE+ ++VF +++ + VT+T+ + G Q
Sbjct: 348 KSKHCFPDVVAYNT-LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 285 EEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAA 344
+ A VF++M+ V P+ T + +L G+ N
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLD---------------------GLCNN------ 439
Query: 345 LINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
GNV+ A VF+ + + LD+V+ +MI A + G + LF + G
Sbjct: 440 --------GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN 434
+ PN VT+ +++ GL EE LF MK +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 153/358 (42%), Gaps = 33/358 (9%)
Query: 41 LIDGYIKCGSVAEARKLFDEMP----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
+I+G K G A L ++M E +V +N++I + A +L+ M +G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV-LDVFVASALVDMYAKFDKMRD 155
+ PD +T++ + G R+ + L+ +L + D+ +AL+D + K K+ +
Sbjct: 281 IKPDVFTYNPLISCLCNYG--RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 156 AHLVFDRVLE-----KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
A ++D +++ DVV + LI G+ + E +EVFREM R + N T + +
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH- 269
D N Q++ +V G+ + + LL VE ++ VF +
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 270 ---VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI 326
VT+T+ + L + G+ E +F + V PN T ++++ + ++E + +
Sbjct: 459 LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Query: 327 HAITTKLG----------------MEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL 368
+ G +G++ A A LI CG A S F ++T +
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA-STFGLVTNM 575
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 120/286 (41%), Gaps = 43/286 (15%)
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH----VTWTSFVVGLV 280
I G ++K G + + SLL + + + ++V + +Q+ + VT+T+ V GL
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKD 340
Q+ + AV++ M+ P+ T +++ R G D
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR-------------------GEPD 232
Query: 341 AGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
L+N ++K + E D+V N++I + +A LF +++ G
Sbjct: 233 LALNLLN------KMEKGK------IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFM-KNNHNIELTREHFTCMIDLLGRSKRFEE 459
+ P+ T+ ++ N G + +L + M + N N +L F +ID + + E
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV--FFNALIDAFVKEGKLVE 338
Query: 460 AAMLINEVTN-----PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
A L +E+ PDVV + TL+ + +E ++ R++ Q
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 165/381 (43%), Gaps = 54/381 (14%)
Query: 41 LIDGYIKCGSVAEARKLFDEMP----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++GY + +A LFD++ + ++VT+ ++I + AVEL+ M G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV-LDVFVASALVDMYAKFDKMRD 155
P+ T++A+ E+G R+G A L ++ + +V +AL+D + K K+ +
Sbjct: 219 SRPNVVTYNALVTGLCEIG--RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276
Query: 156 AHLVFDRVLE----KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
A +++ +++ DV + +LI G GL EA ++F M PNE +
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT--- 333
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YA 267
LIHGF + VED +K+F +++ A
Sbjct: 334 ------------LIHGF--------------------CKSKRVEDGMKIFYEMSQKGVVA 361
Query: 268 SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIH 327
+ +T+T + G GR +VA VF +M P+ T + +L E I
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 328 AITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL----TELDLVSVNSMIYAYAQN 383
K M+ N +I K G V+ A +F L + ++++ +MI + +
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 384 GFGYEALQLFKRIKKLGLAPN 404
G +EA LFK++K+ G PN
Sbjct: 482 GLIHEADSLFKKMKEDGFLPN 502
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 169/364 (46%), Gaps = 27/364 (7%)
Query: 90 GNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV---VLGLEV-LDVFVASALVD 145
G M+ G PD TF+++ G + R +A+ +LG+ +V + L+
Sbjct: 142 GKMMKLGFEPDLVTFTSLLN-----GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 146 MYAKFDKMRDAHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKP 201
K + A +F+++ +VV + AL+ G + G G+A + R+M+ RR++P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 202 NEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF 261
N T + + + +G + + ++ +++ + V + SL+ +++++ ++F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 262 NQL----AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSR 317
+ Y + V +T+ + G ++ R E + +F EM + V N T + ++Q
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 318 AMREVGEQI-HAITTKLGMEGNKDAGAALINLYGKC--GNVDKARSVFDVL----TELDL 370
+V +++ + ++++ D + L G C G V+KA +F+ + ++++
Sbjct: 377 GRPDVAQEVFNQMSSR---RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 371 VSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAF 430
V+ +I + G +A LF + G+ PN +T+ +++ GL+ E LF
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 431 MKNN 434
MK +
Sbjct: 494 MKED 497
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIV----TWNSMISAHVSHGKSKQAVELYGNMLVEG 96
LI G+ K V + K+F EM ++ +V T+ +I + G+ A E++ M
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV----LDVFVASALVDMYAKFDK 152
PD T++ + GL G+ L + + +++ + ++ K K
Sbjct: 394 APPDIRTYNVLLD-----GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 153 MRDAH----LVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNE 203
+ DA +F + ++ +V+ +T +I+G+ + GL EA +F++M + PNE
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 185/439 (42%), Gaps = 44/439 (10%)
Query: 41 LIDGYIKCGSVAEARKLFDEMP-ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP 99
+I GY K G + A + D M +VT+N+++ + GK KQA+E+ ML P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
D T++ + +A R G+ + L D+MRD
Sbjct: 238 DVITYTILIEATC---------RDSGVGHAMKL-----------------LDEMRD---- 267
Query: 160 FDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
R DVV + L+ G + G EA++ +M +PN T L S + G
Sbjct: 268 --RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSF 275
++ + + +++ G V + L+ R ++ ++ + ++ + +++
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLG 334
+ G + + + A+ M+ P+ T +++L A C + + E ++ +++K G
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-G 444
Query: 335 MEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDL----VSVNSMIYAYAQNGFGYEAL 390
+I+ K G KA + D + DL ++ +S++ ++ G EA+
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 391 QLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDL 450
+ F +++G+ PN VTF SI+L + + FM N + +T +I+
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI-NRGCKPNETSYTILIEG 563
Query: 451 LGRSKRFEEAAMLINEVTN 469
L +EA L+NE+ N
Sbjct: 564 LAYEGMAKEALELLNELCN 582
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 186/443 (41%), Gaps = 56/443 (12%)
Query: 67 VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGL 126
V N+ + V G+ ++ + NM+ G +PD + + + F LG R + A L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR--KAAKIL 160
Query: 127 AVVLGL-EVLDVFVASALVDMYAKFDKMRDAHLVFDRV-LEKDVVLFTALIAGYAQSGLD 184
++ G V DV + ++ Y K ++ +A V DR+ + DVV + ++ SG
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSL 244
+A+EV M+ R P+ V + T L
Sbjct: 221 KQAMEVLDRMLQRDCYPD-----------------------------------VITYTIL 245
Query: 245 LTMYSRCSMVEDSVKVFNQL----AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+ R S V ++K+ +++ VT+ V G+ + GR + A+ +M
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 301 SPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARS 360
PN T + IL++ S E++ A + G + LIN + G + +A
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 361 VFDVLT----ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN 416
+ + + + + +S N +++ + + A++ +R+ G P+ VT+ ++L A
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 417 NAGLVEEGCQLFAFM--KNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NP 470
G VE+ ++ + K + +T + +ID L ++ + +A L++E+ P
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLIT---YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 471 DVVLWRTLLNACRIHGEIEMAEK 493
D + + +L+ G+++ A K
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIK 505
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 211/470 (44%), Gaps = 23/470 (4%)
Query: 21 RAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHG 80
+ + V+ + F+Y L L G+V L ++ P+ ++T+N++I +
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 81 KSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVA 140
K ++A G M+ EG+ PD+YT++ + + + G+V+ R G AV G V D F
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF-VPDQFTY 359
Query: 141 SALVDMYAKFDKMRDAHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVD 196
+L+D + A +F+ L K +V+L+ LI G + G+ EA ++ EM +
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 197 RRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED 256
+ + P T + +G + + ++ G + + L+ YS +E+
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 257 SVKVFNQL----AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQ 312
++++ + + T+ S + GL + + E + ++ M+ +PN FT + +L+
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 313 A-CSSRAMREVGEQIHAITTKLGMEGNKDA--GAALINLYGKCGNVDKARSVFDVLTELD 369
+ C R + E + + K N DA LI+ + K G++D A ++F + E
Sbjct: 540 SLCRYRKLDEALGLLEEMKNK---SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 370 LVS-----VNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEG 424
VS N +I+A+ + A +LF+ + L P+G T+ ++ G V G
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 425 CQ-LFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVV 473
+ L M+N LT +I+ L R EAA +I+ + +V
Sbjct: 657 YKFLLEMMENGFIPSLTT--LGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 220/520 (42%), Gaps = 79/520 (15%)
Query: 45 YIKCGSVAEARKLFDEMP----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
Y + G V EA +F+ M E + ++N+++S V G QA ++Y M G+ PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 101 AYTFSAIFKAFS--------------------ELGLVRYGRRAHGLA----VVLGLEVLD 136
Y+F+ K+F E+ +V Y G G E+
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 137 VFVASALVDMYAKFDKM----------RDAHLVFDRVLEKDVV--LFT--ALIAGYAQSG 182
+AS + + F+K+ ++ + D+V+++ V+ LFT I G Q G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 183 -LDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQ 241
LDG A+ + ++++ KP+ T + + ++ G +V GLE +
Sbjct: 266 ELDG-AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 242 TSLLTMYSRCSMVEDSVKVFNQLAYASHV----TWTSFVVGLVQNGREEVAVSVFREMIR 297
+L+ Y + MV+ + ++ + V T+ S + GL G A+++F E +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 298 CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDK 357
+ PN +++++ S++ M Q+ ++ G+ L+N K G V
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 358 ARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
A + V+ D+ + N +I+ Y+ AL++ + G+ P+ T+ S+L
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 414 A-CNNAG----------LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAM 462
C + +VE+GC F F +++ L R ++ +EA
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFT------------FNILLESLCRYRKLDEALG 552
Query: 463 LINEV----TNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
L+ E+ NPD V + TL++ +G+++ A + RK+
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 191/429 (44%), Gaps = 72/429 (16%)
Query: 41 LIDGYIKCGSVAEARKLFD---EMPER-HIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++G+ G V+EA L D EM +R +VT +++I+ G+ +A+ L M+ G
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVA----SALVDMYAKFDK 152
PD T+ + L + G A L + +E ++ + S ++D K
Sbjct: 206 FQPDEVTYGPVLNR-----LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 153 MRDAHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYT--- 205
DA +F+ + ++ DVV +++LI G G + ++ REM+ R + P+ T
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 206 ----------------LASTLASCGNLGDSVN-GQLIHGF---------------IVKSG 233
L + + + G D++ LI GF +V G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YASHVTWTSFVVGLVQNGREEVAV 289
E + + + L+ Y + V+D +++F +++ + +T+ + V+G Q+G+ A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 290 SVFREMIRCSVSPNPFTLSSILQA-CSSRAMR---EVGEQIHAITTKLGMEGNKDAGAAL 345
+F+EM+ V P+ T +L C + + E+ E++ LG+ G
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI------GIYN 494
Query: 346 INLYGKCG--NVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKL 399
I ++G C VD A S+F L++ D+V+ N MI + G EA LF+++K+
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 400 GLAPNGVTF 408
G P+ T+
Sbjct: 555 GCTPDDFTY 563
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 133/296 (44%), Gaps = 35/296 (11%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
LI G G + K+ EM R+I VT++++I V GK +A ELY M+ G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
+ PD T++++ F + + + L V G E D+ S L++ Y K ++ D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP-DIVTYSILINSYCKAKRVDDG 404
Query: 157 HLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
+F + K + + + L+ G+ QSG A E+F+EMV R V P+ T L
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD- 463
Query: 213 CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTM---------YSRC--SMVEDSVKVF 261
G NG+L LE F Q S +T+ + C S V+D+ +F
Sbjct: 464 ----GLCDNGEL------NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 262 NQLA----YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA 313
L+ VT+ + GL + G A +FR+M +P+ FT + +++A
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 218/476 (45%), Gaps = 36/476 (7%)
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
E + T MI+ + K A + G G PD TFS + F GR
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF-----CLEGRV 156
Query: 123 AHGLAVVLGL----EVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE----KDVVLFTAL 174
+ +A+V + + D+ S L++ ++ +A ++ DR++E D V + +
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 216
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPN--EYTLA-STLASCGNLGDSVNGQLIHGFIVK 231
+ +SG AL++FR+M +R +K + +Y++ +L G+ D+++ L + +K
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS--LFNEMEMK 274
Query: 232 SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YASHVTWTSFVVGLVQNGREEV 287
G+++ V + +SL+ +D K+ ++ VT+++ + V+ G+
Sbjct: 275 -GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 288 AVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALI 346
A ++ EMI ++P+ T +S++ C + E + + +K G E + + LI
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILI 392
Query: 347 NLYGKCGNVDKARSVFDVLTELDL----VSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
N Y K VD +F ++ L ++ N+++ + Q+G A +LF+ + G+
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 403 PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAM 462
P+ VT+ +L + G + + ++F M+ + + L + +I + + + ++A
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSR-MTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 463 LINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ--LAPGDGGTHILL 512
L +++ PDVV + ++ G + A+ + RK+ + P D +IL+
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/580 (20%), Positives = 239/580 (41%), Gaps = 87/580 (15%)
Query: 47 KCGSVAEARKLFDEMPERH------IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
K G ++A LF+ M E+ +VT+ S++ + G+ + ++ M+ EG+ P+
Sbjct: 163 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 222
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
+++A+ A++ G+ G G+ + DV + L++ Y + + A VF
Sbjct: 223 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGI-IPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 161 ----DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNL 216
+ +VV + ALI Y +G EA+E+FR+M +KPN ++ + LA+C
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Query: 217 GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL----AYASHVTW 272
VN + G+ A+ S + Y + +E ++ ++ + A VT+
Sbjct: 342 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 401
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
T + G + + A+S +EM S+ SS+L A
Sbjct: 402 TILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA------------------- 442
Query: 333 LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT----ELDLVSVNSMIYAYAQNGFGYE 388
Y K G V +A S+F+ + E D+++ SM++AY + +
Sbjct: 443 ----------------YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 389 ALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMI 448
A +LF ++ G+ P+ + +++ A N G L M+ I T F +
Sbjct: 487 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE-IPFTGAVFFEIF 545
Query: 449 DLLGRSKRFEEAAMLINEVTNP-----DVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAP 503
+ ++ A LI ++ +P + L +L+ G++E K+ K++
Sbjct: 546 SACNTLQEWKRAIDLI-QMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 604
Query: 504 G-DGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHTFMAGDMSH 562
G + T+ +L + G W + I EV +M+G
Sbjct: 605 GINLKTYAILLEHLLAVGNWRKYI------------------------EVLEWMSGAGIQ 640
Query: 563 PRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKMS 602
P +++++ + E++ + + P R L ++ EE K++
Sbjct: 641 P-SNQMYRDIISFGERSAGIEFEPLIRQKLGEMREECKIN 679
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 192/450 (42%), Gaps = 60/450 (13%)
Query: 41 LIDGYIKCGSVAEARKLFDEM------PERHIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
LI+ + + G A L D+M P R T+N++I+A S G ++A+E+ M
Sbjct: 52 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINACGSSGNWREALEVCKKMTD 109
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV-LDVFVASALVDMYAKFDKM 153
GV PD T + + A+ +Y + ++ G +V D + ++ +K +
Sbjct: 110 NGVGPDLVTHNIVLSAYKSGR--QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 167
Query: 154 RDAHLVFDRVLEK------DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLA 207
A +F+ + EK DVV FT+++ Y+ G VF MV +KPN +
Sbjct: 168 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 227
Query: 208 STLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF----NQ 263
+ + + G S + G I ++G+ V S T LL Y R + +VF +
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 264 LAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG 323
+ VT+ + + NG AV +FR+M + + PN ++ ++L ACS +
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 347
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD-------------------- 363
+ + + G+ N A + I Y ++KA +++
Sbjct: 348 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 407
Query: 364 ------------VLTELDLVSV-------NSMIYAYAQNGFGYEALQLFKRIKKLGLAPN 404
L E++ +S+ +S++ AY++ G EA +F ++K G P+
Sbjct: 408 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 467
Query: 405 GVTFISILLACNNAGLVEEGCQLFAFMKNN 434
+ + S+L A N + + C+LF M+ N
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEAN 497
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 118/587 (20%), Positives = 225/587 (38%), Gaps = 120/587 (20%)
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
+N MI H H QA L+ M PDA T+ A+ A G R+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWA-------- 65
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEAL 188
+ ++D + +A+ + ++ LI SG EAL
Sbjct: 66 ---MNLMDDMLRAAIAPSRSTYNN---------------------LINACGSSGNWREAL 101
Query: 189 EVFREMVDRRVKPNEYT---LASTLASCGNLGDSVNG-QLIHGFIVKSGLESFVASQTSL 244
EV ++M D V P+ T + S S +++ +L+ G V+ +F +
Sbjct: 102 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF----NII 157
Query: 245 LTMYSRCSMVEDSVKVFNQL------AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
+ S+ ++ +FN + VT+TS + G E +VF M+
Sbjct: 158 IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 217
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ PN + ++++ A + M + + G+ + + L+N YG+ KA
Sbjct: 218 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 277
Query: 359 RSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
+ VF ++ + ++V+ N++I AY NGF EA+++F+++++ G+ PN V+ ++L A
Sbjct: 278 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Query: 415 CN-----------------------------------NAGLVEEGCQLFAFMKNNHNIEL 439
C+ NA +E+ L+ M+ ++
Sbjct: 338 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK-VKA 396
Query: 440 TREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVL----WRTLLNACRIHGEIEMAEKIM 495
FT +I R ++ EA + E+ + + L + ++L A G++ AE I
Sbjct: 397 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 456
Query: 496 RKV-LQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHT 554
++ + D + + + Y ++ KW + E+
Sbjct: 457 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACEL------------------------FL 492
Query: 555 FMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKM 601
M + P + ++ +A G P FVL DL EK++
Sbjct: 493 EMEANGIEPDSIACSALM-----RAFNKGGQPSNVFVLMDLMREKEI 534
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 164/395 (41%), Gaps = 65/395 (16%)
Query: 41 LIDGYIKCGSVAEARKLF----DEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++ Y + +A+++F E + ++VT+N++I A+ S+G +AVE++ M +G
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV----LDVFVASALVDMYAKFDK 152
+ P+ + + A S R ++ + V+ + L+ ++ + Y +
Sbjct: 324 IKPNVVSVCTLLAACS-----RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 378
Query: 153 MRDAHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLAS 208
+ A ++ + +K D V FT LI+G + EA+ +EM D + + +S
Sbjct: 379 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 438
Query: 209 TLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYAS 268
L + G + I + +G E V + TS+L AY +
Sbjct: 439 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH------------------AYNA 480
Query: 269 HVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA 328
W A +F EM + P+ S++++A + G Q
Sbjct: 481 SEKWGK-------------ACELFLEMEANGIEPDSIACSALMRAFNK------GGQPSN 521
Query: 329 ITTKLGMEGNKD---AGAALINLYGKCGNVDKARSVFDVLTELD--LVSV-----NSMIY 378
+ + + K+ GA ++ C + + + D++ +D L S+ N M++
Sbjct: 522 VFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLH 581
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
+ ++G ++LF +I G+ N T+ +ILL
Sbjct: 582 LFGKSGKVEAMMKLFYKIIASGVGINLKTY-AILL 615
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 205/476 (43%), Gaps = 63/476 (13%)
Query: 44 GYIKCGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP 99
GY+ EA LFD+M E ++T+N++I+ G+ +A L M+ +G+
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL----DVFVASALVDMYAKFDKMRD 155
D T+ I G+ + G L ++ +E DV + SA++D K D
Sbjct: 260 DVVTYGTIVN-----GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 156 AHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
A +F +LEK +V + +I G+ G +A + R+M++R + P+ T + ++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT 271
+ VK G ++ M RC + VT
Sbjct: 375 AS----------------VKEG--KLFEAEKLCDEMLHRC-------------IFPDTVT 403
Query: 272 WTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAIT 330
+ S + G ++ R + A +F M SP+ T ++I+ C ++ + E G Q+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDE-GMQLLREI 458
Query: 331 TKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFG 386
++ G+ N LI+ + + N++ A+ +F + D ++ N ++Y + +N
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 387 YEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTC 446
EAL+LF+ I+ + + V + I+ V+E LF + H +E + +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP-IHGVEPDVQTYNV 577
Query: 447 MIDLLGRSKRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
MI +A +L +++ + PD + TL+ C GEI+ + +++ ++
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 192/471 (40%), Gaps = 44/471 (9%)
Query: 50 SVAEARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFS 105
S+ +A FD M P V N +I V + A+ LY M + + + Y+F+
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 106 AIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE 165
+ K F + + + G LG + DV + L+ D++ +A +F ++E
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQP-DVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 166 KD-------------------VVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTL 206
V+ F LI G G EA + +MV + + + T
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 207 ASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL-- 264
+ + +GD+ + + + ++ ++ V ++++ + D+ +F+++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 265 -AYASHV-TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSR----- 317
A +V T+ + G GR A + R+MI ++P+ T ++++ A
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 318 AMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMI 377
A + E +H + N ++I + K D A+ +FD++ D+V+ N++I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYN-----SMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 378 YAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
Y + E +QL + I + GL N T+ +++ + LF M +H +
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGV 498
Query: 438 ELTREHFTCMIDLLG--RSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHG 486
+ TC I L G +++ EEA L EV + T+ IHG
Sbjct: 499 --CPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHG 546
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 136/322 (42%), Gaps = 60/322 (18%)
Query: 187 ALEVFREMVDRRVKPNEYT---LASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
A+ ++R+M RR+ N Y+ L C L S++ G + K G + V + +
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS---TFGKLTKLGFQPDVVTFNT 181
Query: 244 LLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
LL + C +ED ++ LA ++ T F+ AV++F +M+ ++P
Sbjct: 182 LL--HGLC--LED--RISEALALFGYMVETGFLE----------AVALFDQMVEIGLTPV 225
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALIN-LYGKCGNVDKARSVF 362
T ++++ L +EG AAL+N + GK
Sbjct: 226 VITFNTLING-------------------LCLEGRVLEAAALVNKMVGKG---------- 256
Query: 363 DVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+D+V+ +++ + G AL L ++++ + P+ V + +I+ G
Sbjct: 257 ---LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRTL 478
+ LF+ M I + CMID R+ +A L+ ++ NPDV+ + L
Sbjct: 314 DAQYLFSEMLEK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 479 LNACRIHGEIEMAEKIMRKVLQ 500
++A G++ AEK+ ++L
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLH 394
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 157/376 (41%), Gaps = 44/376 (11%)
Query: 41 LIDGYIKCGSVAEARKLFDEMP----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++G+ + V +A +FD+M + ++V +N++I + A++L M +G
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
+ PD T++++ GL GR + D R
Sbjct: 217 IGPDVVTYNSLIS-----GLCSSGRWS---------------------------DATRMV 244
Query: 157 HLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNL 216
+ R + DV F ALI + G EA E + EM+ R + P+ T + +
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 217 GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YASHVTW 272
+ + GF+V G V + + L+ Y + VE +K+F +++ + VT+
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
T + G + G+ VA +FR M+ C V PN T + +L E I A K
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 333 LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT----ELDLVSVNSMIYAYAQNGFGYE 388
GM+ + +I K G V A ++ L D+ + +M+ + G E
Sbjct: 425 NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRRE 484
Query: 389 ALQLFKRIKKLGLAPN 404
A LF+++K+ G+ PN
Sbjct: 485 ADALFRKMKEDGILPN 500
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 154/381 (40%), Gaps = 40/381 (10%)
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
P I ++ ++SA K + L+ M + G+ + T + + F +
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVL----EKDVVLFTALIAG 177
G + LG E + +L++ + + D++ DA +FD+++ + +VV++ +I G
Sbjct: 137 SFLGKMIKLGHEP-SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG 195
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF 237
+S AL++ M + P+ T S LI G + SG S
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNS---------------LISG-LCSSGRWSD 239
Query: 238 VASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIR 297
S +T + Y T+ + + V+ GR A + EMIR
Sbjct: 240 ATRMVSCMT---------------KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 298 CSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDK 357
S+ P+ T S ++ + + E++ G + + LIN Y K V+
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 358 ARSVFDVLTEL----DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
+F +++ + V+ +I Y + G A ++F+R+ G+ PN +T+ +L
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 414 ACNNAGLVEEGCQLFAFMKNN 434
+ G +E+ + A M+ N
Sbjct: 405 GLCDNGKIEKALVILADMQKN 425
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 18/213 (8%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSG-FSYCLLGHKLIDGYIKCGSVAEARKLFDEMP 62
YS LI L + ++S G F + LI+GY K V KLF EM
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 63 ERHIV----TWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
+R +V T+ +I + GK A E++ M+ GV P+ T++ + GL
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH-----GLCD 408
Query: 119 YGRRAHGLAVVLGLEV----LDVFVASALVDMYAKFDKMRDAHLVFDRV----LEKDVVL 170
G+ L ++ ++ D+ + ++ K ++ DA ++ + L D+
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNE 203
+T ++ G + GL EA +FR+M + + PNE
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 112/248 (45%), Gaps = 9/248 (3%)
Query: 261 FNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMR 320
F++ AY++ + + ++ + + ++ +F M++C P+ S +L A S
Sbjct: 38 FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97
Query: 321 EVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL----DLVSVNSM 376
+V + LG+ N L+N + +C + A S + +L +V+ S+
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 377 IYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHN 436
+ + + Y+AL +F ++ +G PN V + +I+ + V+ L M+ +
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-G 216
Query: 437 IELTREHFTCMIDLLGRSKRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAE 492
I + +I L S R+ +A +++ +T PDV + L++AC G + AE
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 493 KIMRKVLQ 500
+ ++++
Sbjct: 277 EFYEEMIR 284
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 205/476 (43%), Gaps = 63/476 (13%)
Query: 44 GYIKCGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLP 99
GY+ EA LFD+M E ++T+N++I+ G+ +A L M+ +G+
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL----DVFVASALVDMYAKFDKMRD 155
D T+ I G+ + G L ++ +E DV + SA++D K D
Sbjct: 260 DVVTYGTIVN-----GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 156 AHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
A +F +LEK +V + +I G+ G +A + R+M++R + P+ T + ++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT 271
+ VK G ++ M RC + VT
Sbjct: 375 AS----------------VKEG--KLFEAEKLCDEMLHRC-------------IFPDTVT 403
Query: 272 WTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAIT 330
+ S + G ++ R + A +F M SP+ T ++I+ C ++ + E G Q+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDE-GMQLLREI 458
Query: 331 TKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFG 386
++ G+ N LI+ + + N++ A+ +F + D ++ N ++Y + +N
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 387 YEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTC 446
EAL+LF+ I+ + + V + I+ V+E LF + H +E + +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP-IHGVEPDVQTYNV 577
Query: 447 MIDLLGRSKRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
MI +A +L +++ + PD + TL+ C GEI+ + +++ ++
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 192/471 (40%), Gaps = 44/471 (9%)
Query: 50 SVAEARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFS 105
S+ +A FD M P V N +I V + A+ LY M + + + Y+F+
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 106 AIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE 165
+ K F + + + G LG + DV + L+ D++ +A +F ++E
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQP-DVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 166 KD-------------------VVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTL 206
V+ F LI G G EA + +MV + + + T
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 207 ASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL-- 264
+ + +GD+ + + + ++ ++ V ++++ + D+ +F+++
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 265 -AYASHV-TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSR----- 317
A +V T+ + G GR A + R+MI ++P+ T ++++ A
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 318 AMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMI 377
A + E +H + N ++I + K D A+ +FD++ D+V+ N++I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYN-----SMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 378 YAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI 437
Y + E +QL + I + GL N T+ +++ + LF M ++
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG-- 497
Query: 438 ELTREHFTCMIDLLG--RSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHG 486
+ + TC I L G +++ EEA L EV + T+ IHG
Sbjct: 498 -VCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHG 546
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 152/364 (41%), Gaps = 66/364 (18%)
Query: 150 FDKMRDAHLVFDRVLEKDVVLFTAL-----IAGYAQSGLDGEALEVFREMVDRRVKPNEY 204
F + DA FD ++ + +TA+ I + + A+ ++R+M RR+ N Y
Sbjct: 84 FKSLDDAIDFFDYMV-RSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIY 142
Query: 205 T---LASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF 261
+ L C L S++ G + K G + V + +LL + C +ED ++
Sbjct: 143 SFNILIKCFCDCHKLSFSLS---TFGKLTKLGFQPDVVTFNTLL--HGLC--LED--RIS 193
Query: 262 NQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMRE 321
LA ++ T F+ AV++F +M+ ++P T ++++
Sbjct: 194 EALALFGYMVETGFLE----------AVALFDQMVEIGLTPVVITFNTLING-------- 235
Query: 322 VGEQIHAITTKLGMEGNKDAGAALIN-LYGKCGNVDKARSVFDVLTELDLVSVNSMIYAY 380
L +EG AAL+N + GK +D+V+ +++
Sbjct: 236 -----------LCLEGRVLEAAALVNKMVGKG-------------LHIDVVTYGTIVNGM 271
Query: 381 AQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELT 440
+ G AL L ++++ + P+ V + +I+ G + LF+ M I
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK-GIAPN 330
Query: 441 REHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRTLLNACRIHGEIEMAEKIMR 496
+ CMID R+ +A L+ ++ NPDV+ + L++A G++ AEK+
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390
Query: 497 KVLQ 500
++L
Sbjct: 391 EMLH 394
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 213/506 (42%), Gaps = 62/506 (12%)
Query: 47 KCGSVAEARKLFDEMPERH------IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPD 100
K G ++A LF+ M E+ +VT+ S++ + G+ + ++ M+ EG+ P+
Sbjct: 295 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 354
Query: 101 AYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF 160
+++A+ A++ G+ G G+ + DV + L++ Y + + A VF
Sbjct: 355 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGI-IPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 161 ----DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNL 216
+ +VV + ALI Y +G EA+E+FR+M +KPN ++ + LA+C
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 217 GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL----AYASHVTW 272
VN + G+ A+ S + Y + +E ++ ++ + A VT+
Sbjct: 474 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 533
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTK 332
T + G + + A+S +EM S+ SS+L A
Sbjct: 534 TILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA------------------- 574
Query: 333 LGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT----ELDLVSVNSMIYAYAQNGFGYE 388
Y K G V +A S+F+ + E D+++ SM++AY + +
Sbjct: 575 ----------------YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 389 ALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMI 448
A +LF ++ G+ P+ + +++ A N G L M+ I T F +
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE-IPFTGAVFFEIF 677
Query: 449 DLLGRSKRFEEAAMLINEVTNP-----DVVLWRTLLNACRIHGEIEMAEKIMRKVLQLAP 503
+ ++ A LI ++ +P + L +L+ G++E K+ K++
Sbjct: 678 SACNTLQEWKRAIDLI-QMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 736
Query: 504 G-DGGTHILLTNLYASAGKWNQVIEM 528
G + T+ +L + G W + IE+
Sbjct: 737 GINLKTYAILLEHLLAVGNWRKYIEV 762
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 192/450 (42%), Gaps = 60/450 (13%)
Query: 41 LIDGYIKCGSVAEARKLFDEM------PERHIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
LI+ + + G A L D+M P R T+N++I+A S G ++A+E+ M
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINACGSSGNWREALEVCKKMTD 241
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV-LDVFVASALVDMYAKFDKM 153
GV PD T + + A+ +Y + ++ G +V D + ++ +K +
Sbjct: 242 NGVGPDLVTHNIVLSAYK--SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 299
Query: 154 RDAHLVFDRVLEK------DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLA 207
A +F+ + EK DVV FT+++ Y+ G VF MV +KPN +
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 208 STLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF----NQ 263
+ + + G S + G I ++G+ V S T LL Y R + +VF +
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 264 LAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG 323
+ VT+ + + NG AV +FR+M + + PN ++ ++L ACS +
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 479
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD-------------------- 363
+ + + G+ N A + I Y ++KA +++
Sbjct: 480 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 539
Query: 364 ------------VLTELDLVSV-------NSMIYAYAQNGFGYEALQLFKRIKKLGLAPN 404
L E++ +S+ +S++ AY++ G EA +F ++K G P+
Sbjct: 540 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 599
Query: 405 GVTFISILLACNNAGLVEEGCQLFAFMKNN 434
+ + S+L A N + + C+LF M+ N
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEAN 629
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 118/587 (20%), Positives = 225/587 (38%), Gaps = 120/587 (20%)
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
+N MI H H QA L+ M PDA T+ A+ A G R+
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWA-------- 197
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEAL 188
+ ++D + +A+ + ++ LI SG EAL
Sbjct: 198 ---MNLMDDMLRAAIAPSRSTYNN---------------------LINACGSSGNWREAL 233
Query: 189 EVFREMVDRRVKPNEYT---LASTLASCGNLGDSVNG-QLIHGFIVKSGLESFVASQTSL 244
EV ++M D V P+ T + S S +++ +L+ G V+ +F +
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF----NII 289
Query: 245 LTMYSRCSMVEDSVKVFNQL------AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRC 298
+ S+ ++ +FN + VT+TS + G E +VF M+
Sbjct: 290 IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 349
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
+ PN + ++++ A + M + + G+ + + L+N YG+ KA
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 359 RSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
+ VF ++ + ++V+ N++I AY NGF EA+++F+++++ G+ PN V+ ++L A
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 415 CN-----------------------------------NAGLVEEGCQLFAFMKNNHNIEL 439
C+ NA +E+ L+ M+ ++
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK-VKA 528
Query: 440 TREHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVL----WRTLLNACRIHGEIEMAEKIM 495
FT +I R ++ EA + E+ + + L + ++L A G++ AE I
Sbjct: 529 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 588
Query: 496 RKV-LQLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDREVHT 554
++ + D + + + Y ++ KW + E+
Sbjct: 589 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACEL------------------------FL 624
Query: 555 FMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPDTRFVLQDLHEEKKM 601
M + P + ++ +A G P FVL DL EK++
Sbjct: 625 EMEANGIEPDSIACSALM-----RAFNKGGQPSNVFVLMDLMREKEI 666
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 164/395 (41%), Gaps = 65/395 (16%)
Query: 41 LIDGYIKCGSVAEARKLF----DEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++ Y + +A+++F E + ++VT+N++I A+ S+G +AVE++ M +G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV----LDVFVASALVDMYAKFDK 152
+ P+ + + A S R ++ + V+ + L+ ++ + Y +
Sbjct: 456 IKPNVVSVCTLLAACS-----RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 510
Query: 153 MRDAHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLAS 208
+ A ++ + +K D V FT LI+G + EA+ +EM D + + +S
Sbjct: 511 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 570
Query: 209 TLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYAS 268
L + G + I + +G E V + TS+L AY +
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH------------------AYNA 612
Query: 269 HVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHA 328
W A +F EM + P+ S++++A + G Q
Sbjct: 613 SEKWGK-------------ACELFLEMEANGIEPDSIACSALMRAFNK------GGQPSN 653
Query: 329 ITTKLGMEGNKD---AGAALINLYGKCGNVDKARSVFDVLTELD--LVSV-----NSMIY 378
+ + + K+ GA ++ C + + + D++ +D L S+ N M++
Sbjct: 654 VFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLH 713
Query: 379 AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILL 413
+ ++G ++LF +I G+ N T+ +ILL
Sbjct: 714 LFGKSGKVEAMMKLFYKIIASGVGINLKTY-AILL 747
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 231/521 (44%), Gaps = 31/521 (5%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEM 61
Y+ +I K L+ + + AH+ ++G ++ + LIDG K V EA + ++
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288
Query: 62 PERH----IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLV 117
+ +VT+ +++ + + +E+ ML P S++ + + G +
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI 348
Query: 118 RYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV----LEKDVVLFTA 173
V G+ ++FV +AL+D K K +A L+FDR+ L + V ++
Sbjct: 349 EEALNLVKRVVDFGVSP-NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 174 LIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSG 233
LI + + G AL EMVD +K + Y S + GD + ++
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YASHVTWTSFVVGLVQNGREEVAV 289
LE V + TSL+ Y + ++++++++ S T+T+ + GL + G AV
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 290 SVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
+F EM +V PN T + +++ C M + E + +T K G+ + + LI+
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLIHG 586
Query: 349 YGKCGNVDKARSVFDVL----TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPN 404
G +A+ D L EL+ + +++ + + G EAL + + + + G+ +
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 405 GVTFISILLACNNAGLVEEGCQL-FAFMKNNHNIELTREH--FTCMIDLLGRSKRFEEA- 460
V + ++ + L + +L F +K H+ L + +T MID ++ F+EA
Sbjct: 647 LVCYGVLI----DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 461 ---AMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
++INE P+ V + ++N G + AE + K+
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/532 (21%), Positives = 217/532 (40%), Gaps = 56/532 (10%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMP 62
YS LI L T + ++ +G + + LI+G+ K G ++ A EM
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Query: 63 ----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
E +VT+ S++ + S GK +A+ LY M +G+ P YTF+ + GL+R
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
D F++M + ++ +R V + +I GY
Sbjct: 525 --------------------------DAVKLFNEMAEWNVKPNR------VTYNVMIEGY 552
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
+ G +A E +EM ++ + P+ Y+ + G + ++ + K E
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYA----SHVTWTSFVVGLVQNGREEVAVSVFRE 294
T LL + R +E+++ V ++ V + + G +++ ++ + +E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 295 MIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGN 354
M + P+ +S++ A S + I + G N+ A+IN K G
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 355 VDKARSVFDVLTELDLVSVNSMIYAYAQNGFG------YEALQLFKRIKKLGLAPNGVTF 408
V++A + + + V N + Y + +A++L I K GL N T+
Sbjct: 733 VNEAEVLCSKMQPVSSVP-NQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATY 790
Query: 409 ISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT 468
++ G +EE +L M + + +T MI+ L R ++A L N +T
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGD-GVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 469 N----PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ--LAPGDGGTHILLTN 514
PD V + TL++ C + GE+ A ++ ++L+ L P + + +N
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSN 901
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 189/471 (40%), Gaps = 54/471 (11%)
Query: 41 LIDGYIKCGSVAEARKLFDEM-------PERHIVTWNSMISAHVSHGKSKQAVELYGNML 93
LI Y++ V + +F M PE + T ++++ V A+EL+ +M+
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPE--VRTLSALLHGLVKFRHFGLAMELFNDMV 219
Query: 94 VEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKM 153
G+ PD Y ++ + ++ EL + + G +V ++ + L+D K K+
Sbjct: 220 SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV-NIVPYNVLIDGLCKKQKV 278
Query: 154 RDA----HLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLAST 209
+A + + L+ DVV + L+ G + LE+ EM+ R P+E ++S
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS- 337
Query: 210 LASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH 269
L+ G + +E L + R S +F
Sbjct: 338 --------------LVEGLRKRGKIE-------EALNLVKRVVDFGVSPNLF-------- 368
Query: 270 VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAI 329
+ + + L + + A +F M + + PN T S ++ R +
Sbjct: 369 -VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKAR----SVFDVLTELDLVSVNSMIYAYAQNGF 385
G++ + +LIN + K G++ A + + E +V+ S++ Y G
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFT 445
+AL+L+ + G+AP+ TF ++L AGL+ + +LF M N++ R +
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYN 546
Query: 446 CMIDLLGRSKRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAE 492
MI+ +A + E+T PD +R L++ + G+ A+
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/518 (21%), Positives = 217/518 (41%), Gaps = 48/518 (9%)
Query: 6 SLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMPER 64
SL +QC K+ R + ++ G ++ + LI+GY K G + +A + + M R
Sbjct: 367 SLCSQCKFEKA----RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 65 HIV----TWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
+ T+N +I + K A+ + ML VLPD T++++ G
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK----DVVLFTALIA 176
R L GL V D + ++++D K ++ +A +FD + +K +VV++TALI
Sbjct: 482 YRLLSLMNDRGL-VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 177 GYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLES 236
GY ++G EA + +M+ + PN T + + G L+ +VK GL+
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 237 FVASQTSLLTMYSRCSMVEDSVKVFNQLAYA-----SHVTWTSFVVGLVQNGREEVAVSV 291
V++ T L+ + + + F Q+ + +H T+T+F+ + GR A +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH-TYTTFIQTYCREGRLLDAEDM 659
Query: 292 FREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALIN---- 347
+M VSP+ FT SS+++ + G E ++ +LI
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 348 -LYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGV 406
YGK + + E D V ++L +++ + + PN
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTV------------------VELLEKMVEHSVTPNAK 761
Query: 407 TFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINE 466
++ ++L G + ++F M+ N I + F ++ + K+ EAA ++++
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 467 VTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
+ P + + L+ GE E + + +LQ
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 192/444 (43%), Gaps = 64/444 (14%)
Query: 118 RYGRRAHGLAVVLGLEVLDVFVASAL---VDMYAKFDKMRDAHLVFD--RVLEKD----- 167
RY + A +L L + + +V + M D + DA V D R + KD
Sbjct: 118 RYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFEL 177
Query: 168 -----VVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNG 222
+ + L+ A+ GL E +V+ EM++ +V PN YT + LG+
Sbjct: 178 KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 223 QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----------------- 265
IV++GL+ + TSL+ Y + ++ + KVFN++
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 266 ----------------------YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPN 303
+ + T+T + L + R+ A+++ +EM + PN
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 304 PFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFD 363
T + ++ + S+ E ++ + G+ N ALIN Y K G ++ A V +
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 364 VLTELDLV----SVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAG 419
++ L + N +I Y ++ ++A+ + ++ + + P+ VT+ S++ +G
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 420 LVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV----TNPDVVLW 475
+ +L + M N+ + + +T MID L +SKR EEA L + + NP+VV++
Sbjct: 477 NFDSAYRLLSLM-NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 476 RTLLNACRIHGEIEMAEKIMRKVL 499
L++ G+++ A ++ K+L
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKML 559
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 129/596 (21%), Positives = 255/596 (42%), Gaps = 70/596 (11%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++ + G V E ++++ EM E +I T+N M++ + G ++A + ++ G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 97 VLPDAYTFSAI-------------FKAFSELGL-------VRYGRRAHGLAVVLGL-EVL 135
+ PD +T++++ FK F+E+ L V Y HGL V + E +
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 136 DVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMV 195
D+FV KM+D V +T LI S EAL + +EM
Sbjct: 309 DLFV------------KMKDDECF------PTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 196 DRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE 255
+ +KPN +T + S + + + G +++ GL V + +L+ Y + M+E
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 256 DSVKVFNQLA----YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSIL 311
D+V V + + T+ + G ++ + A+ V +M+ V P+ T +S++
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLI 469
Query: 312 QACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE---- 367
+ ++ ++ G+ ++ ++I+ K V++A +FD L +
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 368 LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQL 427
++V ++I Y + G EA + +++ PN +TF +++ G ++E L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 428 FAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA----AMLINEVTNPDVVLWRTLLNA-C 482
M ++ T T +I L + F+ A +++ T PD + T + C
Sbjct: 590 EEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 483 RIHGEIEMAEKIMRKVLQ--LAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKLKKS 540
R G + AE +M K+ + ++P D T+ L Y G+ N ++ +RD + S
Sbjct: 649 R-EGRLLDAEDMMAKMRENGVSP-DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 541 PARSWVDVDREVHTFMAGDM--SHPRAHEI-----FDMLHELIEKAKTLGYSPDTR 589
+++ + + + G S P + FD + EL+EK +P+ +
Sbjct: 707 -QHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 204/484 (42%), Gaps = 68/484 (14%)
Query: 48 CGSVAEARKLFD-----------EMPERHIV-TWNSMISAHVSHGKSKQAVELYGNMLVE 95
C SV +A + D E+ + I+ +N+++++ G + ++Y ML +
Sbjct: 153 CDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLED 212
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
V P+ YT++ + + +LG V + V GL+ D F ++L+ Y + +
Sbjct: 213 KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDP-DFFTYTSLIMGYCQRKDLDS 271
Query: 156 AHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
A VF+ + ++ V +T LI G + EA+++F +M D P T +
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 212 S-CGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
S CG+ R S + VK + ++
Sbjct: 332 SLCGS---------------------------------ERKSEALNLVKEMEETGIKPNI 358
Query: 271 -TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAI 329
T+T + L + E A + +M+ + PN T ++++ R M E + +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGF 385
+ N LI Y K NV KA V + + E D+V+ NS+I ++G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 386 GYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKN---NHNIELTRE 442
A +L + GL P+ T+ S++ + + VEE C LF ++ N N+ +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM--- 534
Query: 443 HFTCMIDLLGRSKRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
+T +ID ++ + +EA +++ ++ + P+ + + L++ G+++ A + K+
Sbjct: 535 -YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 499 LQLA 502
+++
Sbjct: 594 VKIG 597
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 187/470 (39%), Gaps = 80/470 (17%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLV 94
++LI GY K +V +A + ++M ER + VT+NS+I G A L M
Sbjct: 432 NELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEV----LDVFVASALVDMYAKF 150
G++PD +T++++ + L + R + LE +V + +AL+D Y K
Sbjct: 491 RGLVPDQWTYTSMIDS-----LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 151 DKMRDAHLVFDRVLEKDVV----LFTALIAGYAQSGL----------------------- 183
K+ +AHL+ +++L K+ + F ALI G G
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 184 ---------DGE---ALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVK 231
DG+ A F++M+ KP+ +T + + + G ++ + + + +
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 232 SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL----AYASHVTWTSFVVGLV------Q 281
+G+ + + +SL+ Y + V ++ S T+ S + L+ Q
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 282 NGRE------------EVAVSVFREMIRCSVSPNPFTLSS-ILQACSSRAMREVGEQIHA 328
G E + V + +M+ SV+PN + IL C +R +
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 329 ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL----DLVSVNSMIYAYAQNG 384
+ G+ ++ AL++ K ++A V D + + L S +I + G
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 385 FGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN 434
+F+ + + G + + + I+ GLVE +LF M+ N
Sbjct: 846 EKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 177/423 (41%), Gaps = 84/423 (19%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++G+ + EA L D M ++V +N++I+ + A+E++ M +G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
+ DA T++ + GL GR A L DM
Sbjct: 215 IRADAVTYNTLIS-----GLSNSGRWTDA--------------ARLLRDMVK-------- 247
Query: 157 HLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS-C-- 213
R ++ +V+ FTALI + + G EA +++EM+ R V PN +T S + C
Sbjct: 248 -----RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 214 GNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV--- 270
G LGD+ + + +V G V + +L+T + + VED +K+F ++ Y V
Sbjct: 303 GCLGDA---KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 271 -TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAI 329
T+ + + G Q G+ VA VF M+ C VSP+ T + +L
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC---------------- 403
Query: 330 TTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEA 389
L G + ++ D +S DV D+++ N +I + EA
Sbjct: 404 ---LCNNGKIEKALVMVE--------DLQKSEMDV----DIITYNIIIQGLCRTDKLKEA 448
Query: 390 LQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNI-------ELTRE 442
LF+ + + G+ P+ + +I+++ GL E +L MK + + E R+
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRD 508
Query: 443 HFT 445
H+T
Sbjct: 509 HYT 511
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/472 (20%), Positives = 198/472 (41%), Gaps = 55/472 (11%)
Query: 46 IKCGSVAEARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDA 101
+ C +A LF EM P IV + +++ K + LY M G+ D
Sbjct: 55 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 102 YTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFD 161
Y+F+ + F + G + LG + +L++ + + ++ ++A + D
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRP-SIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 162 RV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLG 217
+ +VV++ +I G ++ ALEVF M + ++ + T + ++ N G
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 218 DSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVV 277
+ + +VK ++ V + +T+ +
Sbjct: 234 RWTDAARLLRDMVKRKIDPNV-------------------------------IFFTALID 262
Query: 278 GLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGME 336
V+ G A ++++EMIR SV PN FT +S++ C + + + +K G
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK-GCF 321
Query: 337 GNKDAGAALINLYGKCGNVDKARSVFDVLTELDLV----SVNSMIYAYAQNGFGYEALQL 392
+ LI + K V+ +F +T LV + N++I+ Y Q G A ++
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 393 FKRIKKLGLAPNGVTFISILL--ACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDL 450
F R+ G++P+ VT+ +ILL CNN + + + K+ ++++ + +I
Sbjct: 382 FNRMVDCGVSPDIVTY-NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT--YNIIIQG 438
Query: 451 LGRSKRFEEAAMLINEVT----NPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
L R+ + +EA L +T PD + + T+++ G A+K+ R++
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 3 FYSSLITQCAHTKSLTTLRAVHAH-----VISSGFSYCLLGHKLIDGYIKCGSVAEARKL 57
F+++LI +L R ++ V+ + F+Y + LI+G+ G + +A+ +
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY----NSLINGFCIHGCLGDAKYM 311
Query: 58 FDEMPER----HIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSE 113
FD M + +VT+N++I+ + + ++L+ M +G++ DA+T++ + + +
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 114 LGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV----LEKDVV 169
G + ++ V G+ D+ + L+D K+ A ++ + + ++ D++
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSP-DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 170 LFTALIAGYAQSGLDGEALEVFREMVDRRVKPN 202
+ +I G ++ EA +FR + + VKP+
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 109/531 (20%), Positives = 242/531 (45%), Gaps = 53/531 (9%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLG-HKLIDGYIKCGSVAEARKLFDEMP 62
Y+ +I L+ A+ ++ G+ ++ + L++G+ ++EA L D+M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 63 E----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
E VT+ +++ H K+ +AV L M+V+G PD T+ A+ GL +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN-----GLCK 217
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
G L L +L+ K +K + +E DVV+++ +I
Sbjct: 218 RGEPD------LALNLLN------------KMEKGK---------IEADVVIYSTVIDSL 250
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFV 238
+ +AL +F EM ++ ++P+ +T +S ++ N G + + +++ + V
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYAS----HVTWTSFVVGLVQNGREEVAVSVFRE 294
+ SL+ +++ + ++ K+F+++ S VT+ S + G + R + A +F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 295 MIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
M+ P+ T ++++ C ++ + + G ++ ++ G+ GN LI+ + +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 354 NVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFI 409
+ D A+ VF + ++++ N+++ +NG +A+ +F+ ++K + P+ T+
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 410 SILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN 469
+ AG VE+G LF + + ++ + MI + EEA L ++
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 470 ----PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA-PGDGGTHILLTNL 515
PD + TL+ A G+ + ++++++ GD T+ L+T++
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 182/420 (43%), Gaps = 35/420 (8%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPER----HIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
+ LI G G V+EA L D M E +VT+NS+++ G + A++L M
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMR 154
V D +T+S I + G + G++ V ++LV K K
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS-SVVTYNSLVRGLCKAGKWN 280
Query: 155 DAHLVF----DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPN-------- 202
D L+ R + +V+ F L+ + + G EA E+++EM+ R + PN
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 203 -EYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF 261
Y + + L+ N+ D +V++ + + TSL+ Y V+D +KVF
Sbjct: 341 DGYCMQNRLSEANNMLD---------LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 262 NQLA----YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSR 317
++ A+ VT++ V G Q+G+ ++A +F+EM+ V P+ T +L
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 318 AMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL----TELDLVSV 373
E +I K M+ +I K G V+ A ++F L + ++++
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 374 NSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKN 433
MI + G EA L +++++ G APN T+ +++ A G + +L MK+
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 98/484 (20%), Positives = 211/484 (43%), Gaps = 28/484 (5%)
Query: 53 EARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIF 108
+A LF EM P +V ++ SA + ++ + + G+ + YT + +
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK-- 166
F + G + LG E D + L+ K+ +A ++ DR++E
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEP-DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 167 --DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQL 224
DVV + +++ G +SG AL++ R+M +R VK + +T ++ + S G
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YASHVTWTSFVVGLV 280
+ + G++S V + SL+ + D + + + +T+ + V
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 281 QNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNK 339
+ G+ + A +++EMI +SPN T ++++ C + E + + + +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD-LMVRNKCSPDI 368
Query: 340 DAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYE-----ALQLFK 394
+LI Y VD VF +++ LV+ N++ Y+ GF A +LF+
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA-NAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 395 RIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRS 454
+ G+ P+ +T+ +L + G +E+ ++F ++ + ++L +T +I+ + +
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK-MDLGIVMYTTIIEGMCKG 486
Query: 455 KRFEEAAMLINEV----TNPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ--LAPGDGGT 508
+ E+A L + P+V+ + +++ G + A ++RK+ + AP D
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 509 HILL 512
+ L+
Sbjct: 547 NTLI 550
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 214/467 (45%), Gaps = 55/467 (11%)
Query: 53 EARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIF 108
+A LF +M P IV +N ++SA V K + L M V G+ D YTF+ +
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 109 KAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE--- 165
F V G + LG E V + S LV+ + + +++ DA + D+++E
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS-LVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 166 -KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQL 224
D+V + A+I ++ +A + F+E+ + ++PN T + L
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA---------------L 231
Query: 225 IHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGR 284
++G +S + +R ++ D +K + + +T+++ + V+NG+
Sbjct: 232 VNGL-----------CNSSRWSDAAR--LLSDMIK---KKITPNVITYSALLDAFVKNGK 275
Query: 285 EEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGA 343
A +F EM+R S+ P+ T SS++ C + E + + +K G + +
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYN 334
Query: 344 ALINLYGKCGNVDKARSVFDVLTELDLVS----VNSMIYAYAQNGFGYEALQLFKRIKKL 399
LIN + K V+ +F +++ LVS N++I + Q G +A + F ++
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 400 GLAPNGVTFISILLA--CNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRF 457
G++P+ T+ +ILL C+N G +E+ +F M+ ++L +T +I + ++ +
Sbjct: 395 GISPDIWTY-NILLGGLCDN-GELEKALVIFEDMQ-KREMDLDIVTYTTVIRGMCKTGKV 451
Query: 458 EEAAMLINEVT----NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
EEA L ++ PD+V + T+++ G + E + K+ Q
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 144/311 (46%), Gaps = 16/311 (5%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPER----HIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
+ +ID K V +A F E+ + ++VT+ ++++ + + A L +M+
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMR 154
+ + P+ T+SA+ AF + G V + V + ++ D+ S+L++ D++
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP-DIVTYSSLINGLCLHDRID 312
Query: 155 DAHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
+A+ +FD ++ K DVV + LI G+ ++ + +++FREM R + N T + +
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH- 269
GD Q + G+ + + LL +E ++ +F +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 270 ---VTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQI 326
VT+T+ + G+ + G+ E A S+F + + P+ T ++++ ++ + ++
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL---HEV 489
Query: 327 HAITTKLGMEG 337
A+ TK+ EG
Sbjct: 490 EALYTKMKQEG 500
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 176/407 (43%), Gaps = 74/407 (18%)
Query: 16 SLTTLRAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPER----HIVTWNS 71
+L+ L+ + I G ++ + +ID +V +A LF EM + ++VT+NS
Sbjct: 240 ALSLLKKMEQGKIEPGV---VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 72 MISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLG 131
+I ++G+ A L +M+ + P+ TFSA+ AF + G + + + +
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 132 LEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKD----VVLFTALIAGYAQSGLDGEA 187
++ D+F S+L++ + D++ +A +F+ ++ KD VV + LI G+ ++ E
Sbjct: 357 IDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 188 LEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTM 247
+E+FREM R + N T + LIHGF F A + +
Sbjct: 416 MELFREMSQRGLVGNTVTYTT---------------LIHGF--------FQARECDNAQI 452
Query: 248 YSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTL 307
+ MV D V +T++ + GL NG+ E A+ VF + R + P+ +T
Sbjct: 453 VFK-QMVSDGV-------LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 308 SSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE 367
+ +++ E G + + G++ N
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN----------------------------- 535
Query: 368 LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLA 414
+V+ +M+ + + G EA LF+ +K+ G P+ T+ +++ A
Sbjct: 536 --VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 216/475 (45%), Gaps = 29/475 (6%)
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
E IVT NS+++ + AV L G M+ G PD++TF+ + GL R+ R
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH-----GLFRHNRA 202
Query: 123 AHGLAVVLGLEV----LDVFVASALVDMYAKFDKMRDAHLVFDRV----LEKDVVLFTAL 174
+ +A+V + V D+ +V+ K + A + ++ +E VV++ +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL 234
I +AL +F EM ++ ++PN T S + N G + + +++ +
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 235 ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH----VTWTSFVVGLVQNGREEVAVS 290
V + ++L+ + + + ++ K+++++ S T++S + G + R + A
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 291 VFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLY 349
+F MI PN T +++++ C ++ + E G ++ ++ G+ GN LI+ +
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDE-GMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 350 GKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNG 405
+ D A+ VF + D+++ + ++ NG AL +F+ +++ + P+
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 406 VTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLIN 465
T+ ++ AG VE+G LF + + ++ +T M+ R EEA L
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 466 EVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA-PGDGGTHILLTNL 515
E+ PD + TL+ A G+ + +++R++ GD T L+TN+
Sbjct: 561 EMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNM 615
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 115/548 (20%), Positives = 229/548 (41%), Gaps = 72/548 (13%)
Query: 53 EARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIF 108
+A LF +M P IV ++ ++SA K + L M G+ + YT+S +
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 109 KAFSELGLVRYGRRAHGLAVV-----LGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV 163
F R + + LAV+ LG E D+ ++L++ + +++ DA + ++
Sbjct: 124 NCF-----CRRSQLSLALAVLAKMMKLGYEP-DIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 164 LE----KDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDS 219
+E D F LI G + EA+ + MV + +P+ T + GD
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 220 VNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL----AYASHVTWTSF 275
+ + + +E V +++ V D++ +F ++ + VT+ S
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 276 VVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGM 335
+ L GR A + +MI ++PN T S+++ A E+++ K +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 336 EGNKDAGAALINLYGKCGNVDKARSVFDVLTELD----LVSVNSMIYAYAQNGFGYEALQ 391
+ + ++LIN + +D+A+ +F+++ D +V+ N++I + + E ++
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 392 LFKRIKKLGLAPNGVTFI----------------------------------SILLA--C 415
LF+ + + GL N VT+ SILL C
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 416 NNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NPD 471
NN G VE +F +++ + +E + MI+ + ++ + E+ L ++ P+
Sbjct: 478 NN-GKVETALVVFEYLQRSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 472 VVLWRTLLNA-CRIHGEIEMAEKIMRKVLQLAP-GDGGTHILLTNLYASAGKWNQVIEMK 529
VV + T+++ CR G E A+ + R++ + P D GT+ L + G E+
Sbjct: 536 VVTYTTMMSGFCR-KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 530 TTIRDLKL 537
+R +
Sbjct: 595 REMRSCRF 602
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 209/477 (43%), Gaps = 44/477 (9%)
Query: 32 FSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGN 91
FSY LL LI + + EA L + +T+N++I A + ++A+ L
Sbjct: 164 FSYELLYSILIHALGRSEKLYEAF-LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAK 222
Query: 92 MLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFD 151
M +G D +S + ++ + R++ + V+ L+ +Y + +
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLT---------RSNKIDSVM------------LLRLYKEIE 261
Query: 152 KMRDAHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
+ + LE DV L +I G+A+SG +AL++ + TL S ++
Sbjct: 262 RDK---------LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL----AYA 267
+ + G ++ + + + +SG++ + +LL Y + ++D+ + +++
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP 372
Query: 268 SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIH 327
T++ + V GR E A V +EM V PN F S +L R + Q+
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVL 432
Query: 328 AITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVL----TELDLVSVNSMIYAYAQN 383
+G++ ++ +I+ +GK +D A + FD + E D V+ N++I + ++
Sbjct: 433 KEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKH 492
Query: 384 GFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREH 443
G A ++F+ +++ G P T+ ++ + + ++ +L MK+ + H
Sbjct: 493 GRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH 552
Query: 444 FTCMIDLLGRSKRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMR 496
T ++D+ G+S RF +A + E+ + P ++ L+NA G E A R
Sbjct: 553 -TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 13/234 (5%)
Query: 41 LIDGYIKCGSVAEARKLFDEM------PERHIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
+ID + K + A FD M P+R VTWN++I H HG+ A E++ M
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDR--VTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMR 154
G LP A T++ + ++ + +R G G+ + +V + LVD+Y K +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI-LPNVVTHTTLVDVYGKSGRFN 566
Query: 155 DAHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
DA + + L+ ++ ALI YAQ GL +A+ FR M +KP+ L S +
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL 264
+ G + ++ ++G++ V + T+L+ R + V+ ++
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 180/447 (40%), Gaps = 53/447 (11%)
Query: 37 LGHKLIDGYIKCGSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNM 92
L + +I G+ K G ++A +L + T S+ISA G++ +A L+ +
Sbjct: 271 LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL 330
Query: 93 LVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLE----VLDVFVASALVDMYA 148
G+ P ++A+ K G V+ G ++V +E D S L+D Y
Sbjct: 331 RQSGIKPRTRAYNALLK-----GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 149 KFDKMRDAHLVFDRVLEKDV----VLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEY 204
+ A +V + DV +F+ L+AG+ G + +V +EM VKP+
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 205 TLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL 264
+ + G L H +T + R M+ + ++
Sbjct: 446 FYNVVIDTFGKFN-----CLDHA-----------------MTTFDR--MLSEGIE----- 476
Query: 265 AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGE 324
VTW + + ++GR VA +F M R P T + ++ + + + +
Sbjct: 477 --PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 325 QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDL----VSVNSMIYAY 380
++ G+ N L+++YGK G + A + + + L N++I AY
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 381 AQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELT 440
AQ G +A+ F+ + GL P+ + S++ A E + +MK N ++
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN-GVKPD 653
Query: 441 REHFTCMIDLLGRSKRFEEAAMLINEV 467
+T ++ L R +F++ ++ E+
Sbjct: 654 VVTYTTLMKALIRVDKFQKVPVVYEEM 680
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 185/427 (43%), Gaps = 64/427 (14%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
+ L++G V+EA +L D M E ++T N++++ +GK AV L M+
Sbjct: 162 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLE----VLDVFVASALVDMYAKF 150
G P+ T+ + + + G+ A + ++ +E LD S ++D K
Sbjct: 222 TGFQPNEVTYGPVLNV-----MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 151 DKMRDAHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYT- 205
+ +A +F+ + + D++ + LI G+ +G + ++ R+M+ R++ PN T
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 206 --LASTLASCGNLGDS-----------------VNGQLIHGF---------------IVK 231
L + G L ++ LI GF ++
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 232 SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREEV 287
G + + + L+ Y + + ++D +++F +++ A+ VT+ + V G Q+G+ EV
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 288 AVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALIN 347
A +F+EM+ V P+ + +L E +I K ME D G +I
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME--LDIGIYMII 514
Query: 348 LYGKCG--NVDKARSVFDVL----TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGL 401
++G C VD A +F L +LD + N MI + +A LF+++ + G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 402 APNGVTF 408
AP+ +T+
Sbjct: 575 APDELTY 581
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/456 (19%), Positives = 192/456 (42%), Gaps = 45/456 (9%)
Query: 55 RKLFDEMPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSEL 114
R + P ++ +N + SA + + + L M +G+ YT S + F
Sbjct: 77 RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136
Query: 115 GLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE----KDVVL 170
+ Y G + LG E D + + L++ ++ +A + DR++E ++
Sbjct: 137 RKLSYAFSTMGKIMKLGYEP-DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLIT 195
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
L+ G +G +A+ + MV+ +PNE T L G + + +
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREE 286
+ ++ + ++ + ++++ +FN++ A +T+ + + G GR +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 287 VAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALI 346
+ R+MI+ +SPN T S ++ + +Q+ + G+ N +LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 347 NLYGKCGNVDKARSVFDVLT----ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLA 402
+ + K +++A + D++ + D+++ N +I Y + + L+LF+ + G+
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 403 PNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAM 462
N VT+ + LV+ CQ + +E+ ++ F M+ S+R
Sbjct: 436 ANTVTYNT---------LVQGFCQ-------SGKLEVAKKLFQEMV-----SRR------ 468
Query: 463 LINEVTNPDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
PD+V ++ LL+ +GE+E A +I K+
Sbjct: 469 -----VRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 14/323 (4%)
Query: 4 YSSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMP 62
YS +I SL + + GF ++ + LI G+ G + KL +M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 63 ERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
+R I VT++ +I + V GK ++A +L M+ G+ P+ T++++ F + +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFD----RVLEKDVVLFTAL 174
+ L + G + D+ + L++ Y K +++ D +F R + + V + L
Sbjct: 386 EAIQMVDLMISKGCDP-DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGL 234
+ G+ QSG A ++F+EMV RRV+P+ + L + G+ I G I KS +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 235 ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA----SHVTWTSFVVGLVQNGREEVAVS 290
E + ++ S V+D+ +F L + + L + A
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 291 VFREMIRCSVSPNPFTLSSILQA 313
+FR+M +P+ T + +++A
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRA 587
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 148/350 (42%), Gaps = 34/350 (9%)
Query: 255 EDSVKVFNQL----AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSI 310
+D+V +F + + + + + + + E+ +++ ++M ++ + +TLS +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 311 LQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKC--GNVDKARSVFDVLTE 367
+ C R + + I KLG E + L+N G C V +A + D + E
Sbjct: 130 INCFCRCRKLSYAFSTMGKIM-KLGYEPDTVIFNTLLN--GLCLECRVSEALELVDRMVE 186
Query: 368 L----DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
+ L+++N+++ NG +A+ L R+ + G PN VT+ +L +G
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 424 GCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRTLL 479
+L M+ NI+L ++ +ID L + + A L NE+ D++ + TL+
Sbjct: 247 AMELLRKME-ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 480 NACRIHGEIEMAEKIMRKVL--QLAPGDGGTHILLTNLYASAGKWNQVIEMKTTIRDLKL 537
G + K++R ++ +++P + T +L + + GK + D L
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISP-NVVTFSVLIDSFVKEGKLREA--------DQLL 356
Query: 538 KKSPARSWVDVDREVHTFMAGDMSHPRAHEIFDMLHELIEKAKTLGYSPD 587
K+ R ++ + G R E M+ +I K G PD
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK----GCDPD 402
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 10/303 (3%)
Query: 2 NFYSSLITQCAHTKSLTTLRAVHAHVISSGFSYCL-LGHKLIDGYIKCGSVAEARKLFDE 60
+ YS L + A + H++ S + ++L+ ++ CG + R++FD
Sbjct: 89 DIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDR 148
Query: 61 MPERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGV-----LPDAYTFSAIFKAFSELG 115
MP R +W + + G + A L+ +ML +P ++ + KA + +
Sbjct: 149 MPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIP-SWILGCVLKACAMIR 207
Query: 116 LVRYGRRAHGLAVVLG-LEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTAL 174
G++ H L LG ++ D +++ +L+ Y +F + DA+LV ++ + V + A
Sbjct: 208 DFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAK 267
Query: 175 IAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGD-SVNGQLIHGFIVKSG 233
+ + G E + F EM + +K N ++ L +C + D +GQ +H +K G
Sbjct: 268 VTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLG 327
Query: 234 LESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVT-WTSFVVGLVQNGREEVAVSVF 292
ES + L+ MY + V+D+ KVF + V+ W + V +QNG A+ +
Sbjct: 328 FESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLL 387
Query: 293 REM 295
+M
Sbjct: 388 YQM 390
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 14/254 (5%)
Query: 159 VFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRR----VKPNEYTLASTLASCG 214
+FDR+ +D + + G + G +A +F M+ K + L L +C
Sbjct: 145 MFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACA 204
Query: 215 NLGDSVNGQLIHGFIVKSGL----ESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHV 270
+ D G+ +H K G +S+++ SL+ Y +ED+ V +QL+ A+ V
Sbjct: 205 MIRDFELGKQVHALCHKLGFIDEEDSYLSG--SLIRFYGEFRCLEDANLVLHQLSNANTV 262
Query: 271 TWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS--SRAMREVGEQIHA 328
W + V + G + + F EM + N S++L+ACS S R G+Q+HA
Sbjct: 263 AWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS-GQQVHA 321
Query: 329 ITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSV-NSMIYAYAQNGFGY 387
KLG E + LI +YGK G V A VF + VS N+M+ +Y QNG
Sbjct: 322 NAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYI 381
Query: 388 EALQLFKRIKKLGL 401
EA++L ++K G+
Sbjct: 382 EAIKLLYQMKATGI 395
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 7 LITQCAHTKSLTTLRAVHAHVISSGF-----SYCLLGHKLIDGYIKCGSVAEARKLFDEM 61
++ CA + + VHA GF SY L LI Y + + +A + ++
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSY--LSGSLIRFYGEFRCLEDANLVLHQL 256
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLV-RYG 120
+ V W + ++ G+ ++ + + M G+ + FS + KA S + R G
Sbjct: 257 SNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSG 316
Query: 121 RRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVL-EKDVVLFTALIAGYA 179
++ H A+ LG E D + L++MY K+ K++DA VF E V + A++A Y
Sbjct: 317 QQVHANAIKLGFES-DCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYM 375
Query: 180 QSGLDGEALEVFREMVDRRVKPNEYTL 206
Q+G+ EA+++ +M +K ++ L
Sbjct: 376 QNGIYIEAIKLLYQMKATGIKAHDTLL 402
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 178/364 (48%), Gaps = 26/364 (7%)
Query: 139 VASALVDMYAKFDKMRDAHLVFDRVLE----KDVVLFTALIAGYAQSGLDGEALEVFREM 194
+ASA++ ++ K+ A +F+ V F+ALI+ Y +SGL EA+ VF M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 195 VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGF--IVKSGLESFVASQTSLLTMYSRCS 252
+ ++PN T + + +CG G Q+ F + ++G++ + SLL + SR
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFK-QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 253 MVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLS 308
+ E + +F+++ ++ + + + + G+ ++A + +M + PN + S
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 309 SILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTEL 368
+++ + + + LG+ ++ + L+++Y K G ++A D+L E+
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA---LDILREM 470
Query: 369 -------DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLV 421
D+V+ N+++ Y + G E ++F +K+ + PN +T+ +++ + GL
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 422 EEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRT 477
+E ++F K + + ++ +ID L ++ A LI+E+T +P+VV + +
Sbjct: 531 KEAMEIFREFK-SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 478 LLNA 481
+++A
Sbjct: 590 IIDA 593
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 159/347 (45%), Gaps = 41/347 (11%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
+IDG+ K G EA LF EM I V++N+++S + G+S++A+++ M G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL-DVFVASALVDMYAKFDKMRD 155
+ D T++A+ + + G +Y + VL ++ S L+D Y+K ++
Sbjct: 475 IKKDVVTYNALLGGYGKQG--KYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 156 AHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
A +F L DVVL++ALI ++GL G A+ + EM + PN T S +
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 212 SCG------NLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA 265
+ G D NG G F +S S LT +++ +F QL
Sbjct: 593 AFGRSATMDRSADYSNG----------GSLPFSSSALSALTETEGNRVIQ----LFGQLT 638
Query: 266 YASHVTWTSFVVGLVQNGREEVA--VSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG 323
S+ T + G +E++ + VFR+M + + PN T S+IL ACS
Sbjct: 639 TESNNRTTKD----CEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR---CNSF 691
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNV-DKARSVFDVLTELD 369
E + +L + NK G L G+ NV +A+S+FD + E+D
Sbjct: 692 EDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMD 738
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 114/544 (20%), Positives = 209/544 (38%), Gaps = 129/544 (23%)
Query: 5 SSLITQCAHTKSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCGSVAEARKLFDEMPE 63
S++I+ +T + + + G+ + LI Y + G EA +F+ M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 64 ----RHIVTWNSMISAHVSHGKS-KQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVR 118
++VT+N++I A G KQ + + M GV PD TF+++ S GL
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 119 YGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGY 178
R FD+M + R +E+DV + L+
Sbjct: 357 AARNL--------------------------FDEMTN------RRIEQDVFSYNTLLDAI 384
Query: 179 AQSGLDGEALEVFREMVDRRVKPNEYTLASTL---ASCGNLGDSVNGQLIHGFIVKSGLE 235
+ G A E+ +M +R+ PN + ++ + A G +++N + G + G+
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN---LFGEMRYLGIA 441
Query: 236 SFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA----SHVTWTSFVVGLVQNGREEVAVSV 291
S +LL++Y++ E+++ + ++A VT+ + + G + G+ + V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 292 FREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGK 351
F EM R V PN T S+ LI+ Y K
Sbjct: 502 FTEMKREHVLPNLLTYST-----------------------------------LIDGYSK 526
Query: 352 CGNVDKARSVFDVLT----ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVT 407
G +A +F D+V +++I A +NG A+ L + K G++PN VT
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 408 FISILLACNNAGLVE------------------------EG---CQLFAFMKNNHNIELT 440
+ SI+ A + ++ EG QLF + N T
Sbjct: 587 YNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTT 646
Query: 441 R------EHFTCMIDLLGRSKRFEEAAMLINEVTNPDVVLWRTLLNACRIHGEIEMAEKI 494
+ + +C++++ + + E P+VV + +LNAC E A +
Sbjct: 647 KDCEEGMQELSCILEVFRKMHQLE---------IKPNVVTFSAILNACSRCNSFEDASML 697
Query: 495 MRKV 498
+ ++
Sbjct: 698 LEEL 701
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 151/330 (45%), Gaps = 22/330 (6%)
Query: 186 EALEVFREMVDRRVKPNEY-TLASTLASC-GNLGDSVNGQLIHGFIVKSGLESFVASQTS 243
+A+ + V R + NE LAS + S G G + I G + V + ++
Sbjct: 214 KAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSA 273
Query: 244 LLTMYSRCSMVEDSVKVFNQLA----YASHVTWTSFVVGLVQNGREEVAVS-VFREMIRC 298
L++ Y R + E+++ VFN + + VT+ + + + G E V+ F EM R
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 299 SVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA 358
V P+ T +S+L CS + E + T +E + + L++ K G +D A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 359 RSVFDVLTEL-------DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISI 411
F++L ++ ++VS +++I +A+ G EAL LF ++ LG+A + V++ ++
Sbjct: 394 ---FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 412 LLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN-- 469
L G EE + M + I+ + ++ G+ +++E + E+
Sbjct: 451 LSIYTKVGRSEEALDILREMA-SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 470 --PDVVLWRTLLNACRIHGEIEMAEKIMRK 497
P+++ + TL++ G + A +I R+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 127/245 (51%), Gaps = 23/245 (9%)
Query: 343 AALINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKK 398
+A+I+ G+ G V A+ +F+ + + +++I AY ++G EA+ +F +K+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 399 LGLAPNGVTFISILLACNNAGL-VEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRF 457
GL PN VT+ +++ AC G+ ++ + F M+ N ++ R F ++ + R +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRGGLW 355
Query: 458 EEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRK--VLQLAPGDGGTHIL 511
E A L +E+TN DV + TLL+A G++++A +I+ + V ++ P + ++
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP-NVVSYST 414
Query: 512 LTNLYASAGKWNQVIEMKTTIRDLKLKKSPARSWVDVDR-EVHTFMAGDMSHPRAHEIFD 570
+ + +A AG++++ + + +R L + +DR +T ++ R+ E D
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLG---------IALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 571 MLHEL 575
+L E+
Sbjct: 466 ILREM 470
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 189/422 (44%), Gaps = 58/422 (13%)
Query: 41 LIDGYIKCGSVAEARKLFDEM-------PERHIVTWNSMISAHVSHGKSKQAVELYGNML 93
++ G+ K G V +A EM P+++ T+N++++ G K A+E+ ML
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY--TFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 94 VEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVA----------SAL 143
EG PD YT++++ +LG V+ +EVLD + + L
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKE-----------AVEVLDQMITRDCSPNTVTYNTL 371
Query: 144 VDMYAKFDKMRD----AHLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRV 199
+ K +++ + A ++ + + DV F +LI G + A+E+F EM +
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 200 KPNEYT---LASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVED 256
+P+E+T L +L S G L +++N + + SG V + +L+ + + + +
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALN---MLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 257 SVKVFNQL----AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSIL- 311
+ ++F+++ + VT+ + + GL ++ R E A + +MI P+ +T +S+L
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 312 QACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLV 371
C +++ + + A+T+ G E + LI+ K G V+ A +L + +
Sbjct: 549 HFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASK---LLRSIQMK 604
Query: 372 SVNSMIYAYAQNGFGY-------EALQLFKRIKKLGLAPNGVTFISILLA--CNNAGLVE 422
+N +AY G EA+ LF+ + + AP I+ CN G +
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIR 664
Query: 423 EG 424
E
Sbjct: 665 EA 666
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 216/475 (45%), Gaps = 63/475 (13%)
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVEL-YGNMLVEGVLPDAYTFSAIFKAFSELGLVRYG 120
P+ H +N M++ V G S + VE+ + M V G+ PD TF+ + KA
Sbjct: 152 PDTHF--YNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC-------- 200
Query: 121 RRAHGL-AVVLGLE-------VLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDV---- 168
RAH L +L LE V D + ++ Y + + A + ++++E
Sbjct: 201 -RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 169 VLFTALIAGYAQSGLDGEALEVFREMVDRR-VKPNEYTLASTLASCGNLGDSVNGQLIHG 227
V ++ G+ + G +AL +EM ++ P++YT + + G + I
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 228 FIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQL----AYASHVTWTSFVVGLVQNG 283
+++ G + V + S+++ + V+++V+V +Q+ + VT+ + + L +
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 284 REEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNKDAG 342
+ E A + R + + P+ T +S++Q C +R R E + +K G E ++
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTY 438
Query: 343 AALINLYGKCGNVDKARSVFDVLTELDL-------VSVNSMIYAYAQNGFGYEALQLFKR 395
LI+ G +D+A ++L +++L ++ N++I + + EA ++F
Sbjct: 439 NMLIDSLCSKGKLDEA---LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 396 IKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFM--------KNNHNIELTREHFTCM 447
++ G++ N VT+ +++ + VE+ QL M K +N LT HF
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT--HFC-- 551
Query: 448 IDLLGRSKRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
R ++AA ++ +T+ PD+V + TL++ G +E+A K++R +
Sbjct: 552 -----RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 223/509 (43%), Gaps = 40/509 (7%)
Query: 21 RAVHAHVISSGFSYCLLGHKLIDGYIKCGSVAEARKLFDEMPERHI----VTWNSMISAH 76
R H + S F Y + LIDG K + +A +LFDEM R + +T+N++I +
Sbjct: 204 RMKHDRIYPSVFIY----NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 77 VSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLD 136
G +++ ++ M + + P TF+ + K + G+V LG V D
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF-VPD 318
Query: 137 VFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVL----FTALIAGYAQSGLDGEALEVFR 192
F S L D Y+ +K A V++ ++ V + + L+ + G +A E+
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 193 EMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCS 252
+ + + PNE + + GD V ++ + K G++ + L+ +
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 253 MVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLS 308
+E++ K N++ S T+ + G + + + +EM PN +
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 309 SILQACSSRAMREVGEQIHAITTKLGMEGNKDAG-AALINLY-----GKC--GNVDKA-- 358
+++ C + + + QI K ME D G + + +Y G C G ++ A
Sbjct: 499 TLIN-CLCKGSKLLEAQI----VKRDME---DRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 359 --RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACN 416
+ + EL+LV+ N++I + G EA L I + GL P+ T+ S++
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 417 NAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT-NPDVVLW 475
AG V+ L+ MK + I+ T + + +I L + + E L E++ PD++++
Sbjct: 611 FAGNVQRCIALYEEMKRS-GIKPTLKTYHLLISLCTK-EGIELTERLFGEMSLKPDLLVY 668
Query: 476 RTLLNACRIHGEIEMAEKIMRKVLQLAPG 504
+L+ +HG++E A + +++++ + G
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 24/377 (6%)
Query: 143 LVDMYAKFDKMRDAHLVFDRVLEKDV----VLFTALIAGYAQSGLDGEALEVFREMVDRR 198
L+D K + R VF +LE D ++ I + G+ LE+F M R
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 209
Query: 199 VKPNEY---TLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVE 255
+ P+ + L L + D+ QL + + L S + T L+ Y + E
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDA--EQLFDEMLARRLLPSLITYNT-LIDGYCKAGNPE 266
Query: 256 DSVKVFNQLA----YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSIL 311
S KV ++ S +T+ + + GL + G E A +V +EM P+ FT S +
Sbjct: 267 KSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILF 326
Query: 312 QACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLV 371
SS E ++ G++ N + L+N K G ++KA + LV
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Query: 372 S----VNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQL 427
N+MI Y + G A + ++K G+ P+ + + ++ G +E +
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 428 FAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV----TNPDVVLWRTLLNACR 483
MK + + E + +I GR F++ ++ E+ T P+VV + TL+N C
Sbjct: 447 VNKMK-LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN-CL 504
Query: 484 IHGEIEMAEKIMRKVLQ 500
G + +I+++ ++
Sbjct: 505 CKGSKLLEAQIVKRDME 521
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 176/428 (41%), Gaps = 58/428 (13%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIV----TWNSMISAHVSHGKSKQAVELYGNMLV 94
+ L+ G K G V +A + EM + V T++ + + S+ K++ A+ +Y +
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAK----- 149
GV +AYT S + A + G + G + GL V + + + ++D Y +
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL-VPNEVIYNTMIDGYCRKGDLV 406
Query: 150 --------FDK--MRDAHLVFDRVLEK------------------------DVVLFTALI 175
+K M+ HL ++ ++ + V + LI
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 176 AGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLE 235
GY + + ++ +EM D PN + TL +C G +L+ IVK +E
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG-TLINCLCKG----SKLLEAQIVKRDME 521
Query: 236 SF-VASQTSLLTMYSR--CSM--VEDSVKVFNQLAYA----SHVTWTSFVVGLVQNGREE 286
V+ + + M CS +ED+ + ++ + VT+ + + GL G+
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 287 VAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALI 346
A + E+ R + P+ FT +S++ + ++ + G++ LI
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Query: 347 NLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGV 406
+L K G R ++ + DL+ N +++ YA +G +A L K++ + + +
Sbjct: 642 SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701
Query: 407 TFISILLA 414
T+ S++L
Sbjct: 702 TYNSLILG 709
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 212/504 (42%), Gaps = 33/504 (6%)
Query: 27 VISSGFSYCLLGHKLIDGY----IKCGSVAEARKLFDEMPERHIV----TWNSMISAHVS 78
V+ S + C+ G + D I G + EA + F +M + + N ++
Sbjct: 180 VLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAK 239
Query: 79 HGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVF 138
GK+ + +M+ G P +T++ + + G V R GL V D
Sbjct: 240 LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL-VPDTV 298
Query: 139 VASALVDMYAKFDKMRDAHLVF----DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREM 194
++++D + K ++ D F D E DV+ + ALI + + G LE +REM
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 195 VDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMV 254
+KPN + ++ + + G + + + GL + TSL+ + +
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 255 EDSVKVFNQLAYA----SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSI 310
D+ ++ N++ + VT+T+ + GL R + A +F +M V PN + +++
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 311 LQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG--NVDKARSVFDVLTE 367
+ ++ M E ++ + + G++ + I +G C ++ A+ V + + E
Sbjct: 479 IHGFVKAKNMDRALELLNELKGR-GIKPDLLLYGTFI--WGLCSLEKIEAAKVVMNEMKE 535
Query: 368 LDLVSVNSMIY-----AYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVE 422
+ NS+IY AY ++G E L L +K+L + VTF ++ LV
Sbjct: 536 CG-IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 423 EGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEVTN----PDVVLWRTL 478
+ F + N+ ++ FT MID L + + E A L ++ PD + +L
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 654
Query: 479 LNACRIHGEIEMAEKIMRKVLQLA 502
++ G + A + K+ ++
Sbjct: 655 MDGNFKQGNVLEALALRDKMAEIG 678
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 136/334 (40%), Gaps = 77/334 (23%)
Query: 41 LIDGYIKCGSVAEARKLFDEM----PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
LID K G++++A +L +EM E ++VT+ ++I + K+A EL+G M G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 97 VLPDAYTFSAIFKAF-------------SEL-------GLVRYGRRAHGLAVVLGLEVLD 136
V+P+ +++A+ F +EL L+ YG GL + +E
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 137 V--------------FVASALVDMYAKFDKMRDAHLVFDRVLEKD----VVLFTALIAGY 178
V + + L+D Y K + + D + E D VV F LI G
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 179 AQSGLDGEALE----------------VFREMVDRRVKPNEYTLASTLASCGNLGDSVNG 222
++ L +A++ +F M+D K N+ A+TL
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE---------- 637
Query: 223 QLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH----VTWTSFVVG 278
+V+ GL + TSL+ + V +++ + +++A + +TS V G
Sbjct: 638 -----QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 279 LVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQ 312
L + + A S EMI + P+ S+L+
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 152/312 (48%), Gaps = 18/312 (5%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPER----HIVTWNSMISAHVSHGKSKQAVELYGNMLV 94
+ +ID K V +A LF EM + ++VT++S+IS S+G+ A +L +M+
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMR 154
+ + P+ TF+A+ AF + G + + + ++ D+F ++LV+ + D++
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP-DIFTYNSLVNGFCMHDRLD 382
Query: 155 DAHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTL 210
A +F+ ++ K DVV + LI G+ +S + E+FREM R + + T + +
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 211 ASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA--- 267
+ GD N Q + +V G+ + + + LL +E +++VF+ + +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 268 -SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA-CSSRAMREVGEQ 325
+T+ + G+ + G+ + +F + V PN T ++++ CS R ++E
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA--- 559
Query: 326 IHAITTKLGMEG 337
+A+ K+ +G
Sbjct: 560 -YALLKKMKEDG 570
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 187/414 (45%), Gaps = 25/414 (6%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPE----RHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++GY +++A L D+M E +T+ ++I H K+ +AV L M+ G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVL----DVFVASALVDMYAKFDK 152
P+ T+ + GL + G L ++ +E DV + + ++D K+
Sbjct: 221 CQPNLVTYGVVVN-----GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 153 MRDAHLVFDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLAS 208
+ DA +F + + +VV +++LI+ G +A ++ +M+++++ PN T +
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 209 TLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF----NQL 264
+ + G V + ++ ++K ++ + + SL+ + ++ + ++F ++
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 265 AYASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGE 324
+ VT+ + + G ++ R E +FREM + + T ++++Q + +
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 325 QIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTE----LDLVSVNSMIYAY 380
++ G+ + + L++ G ++KA VFD + + LD+ +MI
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 381 AQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNN 434
+ G + LF + G+ PN VT+ +++ + L++E L MK +
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/500 (19%), Positives = 214/500 (42%), Gaps = 54/500 (10%)
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
P IV +N ++SA K + L M ++ YT++ + F +
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLE----KDVVLFTALIAG 177
G + LG E + S+L++ Y ++ DA + D+++E D + FT LI G
Sbjct: 141 ALLGKMMKLGYEP-SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESF 237
EA+ + MV R +PN T + GD+ + + + +E+
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 238 VASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREEVAVSVFR 293
V +++ + V+D++ +F ++ + VT++S + L GR A +
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 294 EMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCG 353
+MI ++PN T ++++ A E+++ K ++ + +L+N +
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 354 NVDKARSVFDVLTE----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFI 409
+DKA+ +F+ + D+V+ N++I + ++ + +LF+ + GL + VT+
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 410 SILLA------CNNA-----------------------------GLVEEGCQLFAFMKNN 434
+++ C+NA G +E+ ++F +M+ +
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 435 HNIELTREHFTCMIDLLGRSKRFEEAAMLINEVT----NPDVVLWRTLLNACRIHGEIEM 490
I+L +T MI+ + ++ + ++ L ++ P+VV + T+++ ++
Sbjct: 500 E-IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 491 AEKIMRKVLQLAP-GDGGTH 509
A +++K+ + P + GT+
Sbjct: 559 AYALLKKMKEDGPLPNSGTY 578
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 13/277 (4%)
Query: 49 GSVAEARKLFDEMPERHI----VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTF 104
G ++A +L +M E+ I VT+N++I A V GK +A +LY +M+ + PD +T+
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 105 SAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVF---- 160
+++ F + ++ V DV + L+ + K ++ D +F
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDC-FPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 161 DRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSV 220
R L D V +T LI G G A +VF++MV V P+ T + L N G
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 221 NGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFV 276
+ ++ KS ++ + T+++ + V+D +F L+ + VT+ + +
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 277 VGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQA 313
GL + A ++ ++M PN T +++++A
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 186/404 (46%), Gaps = 40/404 (9%)
Query: 39 HKLIDGYIKCGSVAEARKLFDEMPERHIV----TWNSMISAHVSHGKSKQAVELYGNMLV 94
+ L+ GY K GS+ EA ++ + M + +++ T+N +I+ + G ++ +EL M
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 95 EGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMR 154
+ PD T++ + ELGL R+ G++ V +L + ++ R
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISL--KWLCKEEKR 396
Query: 155 DA------HLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLAS 208
+A LV D+V + LI Y + G ALE+ REM + +K N TL +
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 209 TL-ASCG--------NLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVK 259
L A C NL +S + + GFIV + +L+ + R VE +++
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKR---GFIVDE------VTYGTLIMGFFREEKVEKALE 507
Query: 260 VFNQLA----YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS 315
+++++ + T+ S + GL +G+ E+A+ F E+ + P+ T +SI+
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 316 SRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT---ELDLVS 372
E + + + K + + L+N K G +KA + F+ L E+D V+
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT 627
Query: 373 VNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVT---FISILL 413
N+MI A+ ++ EA L +++ GL P+ T FIS+L+
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLM 671
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 154/349 (44%), Gaps = 55/349 (15%)
Query: 170 LFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFI 229
LF ++ Y G AL++F++M+ ++KPN L +C L LI
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPN-------LLTCNTL-------LI---- 174
Query: 230 VKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASHVTWTSFVVGLVQNGREEVAV 289
GL + +S ++ S + +D VK+ L T+ V G G+ E A+
Sbjct: 175 ---GLVRYPSS----FSISSAREVFDDMVKIGVSLNVQ---TFNVLVNGYCLEGKLEDAL 224
Query: 290 SVFREMI-RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
+ M+ V+P+ T ++IL+A S + +++ K G+ N+ L+
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 349 YGKCGNVDKARSVFDVLTEL----DLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPN 404
Y K G++ +A + +++ + DL + N +I G E L+L +K L L P+
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344
Query: 405 GVTFISILLACNNAGLVEEGCQLFAFMKNN--------HNIELTREHFTCMIDLLGRSKR 456
VT+ +++ C GL E +L M+N+ HNI L L + ++
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK---------WLCKEEK 395
Query: 457 FEEAAMLINEVTN-----PDVVLWRTLLNACRIHGEIEMAEKIMRKVLQ 500
E + E+ + PD+V + TL+ A G++ A ++MR++ Q
Sbjct: 396 REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 239 ASQTSLLTMYSRCSMVEDSVKVFNQLAYAS-HVTWTS----FVVGL---VQNGREEVAVS 290
A SLL Y R S + S+ + N L + + H++ F + L + G+ VA+
Sbjct: 95 ADAKSLLVSYIRTS--DASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQ 152
Query: 291 VFREMIRCSVSPNPFTLSSIL-------QACSSRAMREVGEQIHAITTKLGMEGNKDAGA 343
+F++MIR + PN T +++L + S + REV + + K+G+ N
Sbjct: 153 IFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDM----VKIGVSLNVQTFN 208
Query: 344 ALINLYGKCGNVDKA-----RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKK 398
L+N Y G ++ A R V + D V+ N+++ A ++ G + +L +KK
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268
Query: 399 LGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFE 458
GL PN VT+ +++ G ++E Q+ MK N+ + +I+ L +
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT-NVLPDLCTYNILINGLCNAGSMR 327
Query: 459 EAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKV 498
E L++ + + PDVV + TL++ C G A K+M ++
Sbjct: 328 EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 127/347 (36%), Gaps = 69/347 (19%)
Query: 11 CAHTKSLTTLRAVHAHVISSGFSYCLLG-HKLIDGYIKCGSVAEARKLFDEMPERHI--- 66
C K R V V GFS ++ H LI Y+K G ++ A ++ EM ++ I
Sbjct: 391 CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 67 -VTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHG 125
+T N+++ A K +A L + G + D T+ + +G R +
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI-----MGFFREEK---- 501
Query: 126 LAVVLGLEVLDVFVASALVDMYAKFD----------KMRDAHLVFDRVLE----KDVVLF 171
V LE+ D + + F+ K A FD + E D F
Sbjct: 502 --VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 172 TALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVK 231
++I GY + G +A E + E + KP+ YT C L +NG + K
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT-------CNIL---LNG------LCK 603
Query: 232 SGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYASH---VTWTSFVVGLVQNGREEVA 288
G M E ++ FN L VT+ + + ++ + + A
Sbjct: 604 EG-------------------MTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEA 644
Query: 289 VSVFREMIRCSVSPNPFTLSSILQACSSRA-MREVGEQIHAITTKLG 334
+ EM + P+ FT +S + + E E + + K G
Sbjct: 645 YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 178/400 (44%), Gaps = 39/400 (9%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERH-----IVTWNSMISAHVSHGKSKQAVELYGNMLVE 95
LI GY K G+ +A + EM RH ++T+ S+I + G +A+E M V
Sbjct: 316 LIKGYCKEGNFHQALVMHAEML-RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 96 GVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRD 155
G+ P+ T++ + FS+ G + R G V +AL++ + KM D
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP-SVVTYNALINGHCVTGKMED 433
Query: 156 AHLVFDRVLEK----DVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLA 211
A V + + EK DVV ++ +++G+ +S EAL V REMV++ +KP+ T +S +
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 212 SCGNLGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YA 267
+ ++ +++ GL + T+L+ Y +E ++++ N++
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 268 SHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIH 327
VT++ + GL + R A + ++ P+ T ++++ CS+ + V I
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 328 AITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT----ELDLVSVNSMIYAYAQN 383
K G + +A VF+ + + D + N MI+ + +
Sbjct: 614 GFCMK--------------------GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 384 GFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
G +A L+K + K G + VT I+++ A + G V E
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 177/427 (41%), Gaps = 42/427 (9%)
Query: 41 LIDGYIKCGSVAEARKLFDEMP----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
LIDGY K + + KL M E +++++N +I+ G+ K+ + M G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
D T++ + K + + G H + GL V ++L+ K M A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAGNMNRA 364
Query: 157 HLVFD----RVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLAS 212
D R L + +T L+ G++Q G EA V REM D P+ T + +
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN- 423
Query: 213 CGNLGDSVNGQLIHGFIV-----KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA-- 265
G V G++ V + GL V S +++L+ + R V+++++V ++
Sbjct: 424 ----GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 266 --YASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVG 323
+T++S + G + R + A ++ EM+R + P+ FT ++++ A E
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 324 EQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKAR-------------------SVFDV 364
Q+H + G+ + + LIN K +A+ ++ +
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 365 LTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEEG 424
+ ++ SV S+I + G EA Q+F+ + P+G + ++ AG + +
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 425 CQLFAFM 431
L+ M
Sbjct: 660 YTLYKEM 666
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 206/491 (41%), Gaps = 57/491 (11%)
Query: 41 LIDGYIKCGSVAEARKLFDEMPERHIVTWNSMISAHVSHGKSKQAVE-LYGNMLVEGVLP 99
LID + +A+A MP ++++N+++ A + ++ E ++ ML V P
Sbjct: 149 LIDKALSIVHLAQAHGF---MP--GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203
Query: 100 DAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLV 159
+ +T++ + + F G + G + +V + L+D Y K K+ D +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGC-LPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 160 FDRV----LEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGN 215
+ LE +++ + +I G + G E V EM R +E T + +
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 216 LGDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAY----ASHVT 271
G+ ++H +++ GL V + TSL+ + + +++ +Q+ + T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 272 WTSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITT 331
+T+ V G Q G A V REM SP+ T ++++ H +T
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING-------------HCVTG 429
Query: 332 KLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQ 391
K+ +DA A L ++ K D+VS ++++ + ++ EAL+
Sbjct: 430 KM-----EDAIAVLEDMKEKG-------------LSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 392 LFKRIKKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHF--TCMID 449
+ + + + G+ P+ +T+ S++ +E C L+ M + L + F T +I+
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML---RVGLPPDEFTYTALIN 528
Query: 450 LLGRSKRFEEAAMLINEVTN----PDVVLWRTLLNACRIHGEIEMAEKIMRKVL--QLAP 503
E+A L NE+ PDVV + L+N A++++ K+ + P
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 504 GDGGTHILLTN 514
D H L+ N
Sbjct: 589 SDVTYHTLIEN 599
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 209/498 (41%), Gaps = 79/498 (15%)
Query: 15 KSLTTLRAVHAHVISSGFSYCLLGHK-LIDGYIKCG-SVAEARKLFDEMPER----HIVT 68
K+L+ + AH GF +L + ++D I+ +++ A +F EM E ++ T
Sbjct: 152 KALSIVHLAQAH----GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 207
Query: 69 WNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRRAHGLAV 128
+N +I G A+ L+ M +G LP+ T+
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY------------------------ 243
Query: 129 VLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRV----LEKDVVLFTALIAGYAQSGLD 184
+ L+D Y K K+ D + + LE +++ + +I G + G
Sbjct: 244 ------------NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 185 GEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVASQTSL 244
E V EM R +E T + + G+ ++H +++ GL V + TSL
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 245 LTMYSRCSMVEDSVKVFNQLAY----ASHVTWTSFVVGLVQNGREEVAVSVFREMIRCSV 300
+ + + +++ +Q+ + T+T+ V G Q G A V REM
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 301 SPNPFTLSSILQA-CSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKA- 358
SP+ T ++++ C + M + + + K G+ + + + +++ + + +VD+A
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 359 ---RSVFDVLTELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLAC 415
R + + + D ++ +S+I + + EA L++ + ++GL P+ T+ +++ A
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 416 NNAGLVEEGCQLFAFMKNNHNIELTRE-------HFTCMIDLLGRSKRFEEAAMLI---- 464
G +E+ QL HN E+ + ++ +I+ L + R EA L+
Sbjct: 531 CMEGDLEKALQL-------HN-EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 465 NEVTNPDVVLWRTLLNAC 482
E + P V + TL+ C
Sbjct: 583 YEESVPSDVTYHTLIENC 600
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/508 (19%), Positives = 209/508 (41%), Gaps = 86/508 (16%)
Query: 62 PERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGR 121
P HI T MIS G + +E++ M +GV ++++A+ A+ R GR
Sbjct: 139 PNEHIYTI--MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYG-----RNGR 191
Query: 122 RAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVLFTALIAGYAQS 181
L ++ D+M++ + ++ + +I A+
Sbjct: 192 YETSLELL---------------------DRMKNEK------ISPSILTYNTVINACARG 224
Query: 182 GLDGEA-LEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIVKSGLESFVAS 240
GLD E L +F EM ++P+ T + L++C G +++ + G+ + +
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 241 QTSLLTMYSRCSMVEDSVKVFNQLAYASHV----TWTSFVVGLVQNGREEVAVSVFREMI 296
+ L+ + + +E + ++A + ++ + ++G + A+ VF +M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 297 RCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVD 356
+PN T S L+NL+G+ G D
Sbjct: 345 AAGCTPNANTYS-----------------------------------VLLNLFGQSGRYD 369
Query: 357 KARSVFDVL----TELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISIL 412
R +F + T+ D + N +I + + G+ E + LF + + + P+ T+ I+
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Query: 413 LACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEAAMLINEV----T 468
AC GL E+ ++ +M N +I + + +T +I+ G++ +EEA + N + +
Sbjct: 430 FACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 469 NPDVVLWRTLLNACRIHGEIEMAEKIMRKVLQLA-PGDGGTHILLTNLYASAGKWNQVIE 527
NP + + +LL + G ++ +E I+ +++ P + T Y GK+ + +
Sbjct: 489 NPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV- 547
Query: 528 MKTTIRDLKLKKSPARSWVDVDREVHTF 555
KT + K + P ++ V++F
Sbjct: 548 -KTYVDMEKSRCDPDERTLEAVLSVYSF 574
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 23/344 (6%)
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRV--KPNEYTLASTLASCGNLGDSVNGQLIHGF 228
F + +A G +L +F+ M R++ KPNE+ ++ G G +
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYM-QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDE 166
Query: 229 IVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF----NQLAYASHVTWTSFVVGLVQNGR 284
+ G+ V S T+L+ Y R E S+++ N+ S +T+ + + + G
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 285 E-EVAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGA 343
+ E + +F EM + P+ T +++L AC+ R + + E + G+ + +
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 344 ALINLYGKCGNVDKARSVFDVLTEL-------DLVSVNSMIYAYAQNGFGYEALQLFKRI 396
L+ +GK ++K V D+L E+ D+ S N ++ AYA++G EA+ +F ++
Sbjct: 287 HLVETFGKLRRLEK---VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 397 KKLGLAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKR 456
+ G PN T+ +L +G ++ QLF MK++ N + + +I++ G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS-NTDPDAATYNILIEVFGEGGY 402
Query: 457 FEEAAML----INEVTNPDVVLWRTLLNACRIHGEIEMAEKIMR 496
F+E L + E PD+ + ++ AC G E A KI++
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 184/427 (43%), Gaps = 53/427 (12%)
Query: 57 LFDEMPERH------IVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKA 110
LF EM RH IVT+N+++SA G +A ++ M G++PD T+S + +
Sbjct: 234 LFAEM--RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 111 FSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEKDVVL 170
F +L RR + +LG ++ +L D+
Sbjct: 292 FGKL------RRLEKVCDLLG----EMASGGSL----------------------PDITS 319
Query: 171 FTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQLIHGFIV 230
+ L+ YA+SG EA+ VF +M PN T + L G G + + + +
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 231 KSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLA----YASHVTWTSFVVGLVQNGREE 286
S + A+ L+ ++ ++ V +F+ + T+ + + G E
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 287 VAVSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITT--KLGMEGNKDAGAA 344
A + + M + P+ + +++A A+ E E + A T ++G + + +
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYE--EALVAFNTMHEVGSNPSIETFHS 497
Query: 345 LINLYGKCGNVDKARSVFDVLTELDLV----SVNSMIYAYAQNGFGYEALQLFKRIKKLG 400
L+ + + G V ++ ++ L + + + N+ I AY Q G EA++ + ++K
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 401 LAPNGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSKRFEEA 460
P+ T ++L + A LV+E + F MK + +I + + M+ + G+++R+++
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDECREQFEEMKAS-DILPSIMCYCMMLAVYGKTERWDDV 616
Query: 461 AMLINEV 467
L+ E+
Sbjct: 617 NELLEEM 623
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 121/298 (40%), Gaps = 41/298 (13%)
Query: 41 LIDGYIKCGSVAEARKLFDEMP----ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEG 96
L++ Y K GS+ EA +F +M + T++ +++ G+ +L+ M
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 97 VLPDAYTFSAIFKAFSELGLVRYGRRAHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDA 156
PDA T++ + + F E G + EV+ +F
Sbjct: 383 TDPDAATYNILIEVFGEGGYFK--------------EVVTLF------------------ 410
Query: 157 HLVFDRVLEKDVVLFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNL 216
H + + +E D+ + +I + GL +A ++ + M + P+ + + G
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 217 GDSVNGQLIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVFNQLAYA----SHVTW 272
+ + + G + + SLL ++R +V++S + ++L + + T+
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 530
Query: 273 TSFVVGLVQNGREEVAVSVFREMIRCSVSPNPFTLSSILQACS-SRAMREVGEQIHAI 329
+ + Q G+ E AV + +M + P+ TL ++L S +R + E EQ +
Sbjct: 531 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM 588
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 203/464 (43%), Gaps = 46/464 (9%)
Query: 63 ERHIVTWNSMISAHVSHGKSKQAVELYGNMLVEGVLPDAYTFSAIFKAFSELGLVRYGRR 122
E ++ T+N ++ A + K A +L M +G PDA +++ + + E+GLV+ GR
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 123 -AHGLAVVLGLEVLDVFVASALVDMYAKFDKMRDAHLVFDRVLEK----DVVLFTALIAG 177
A V V V +AL++ K + A + ++EK +V+ ++ LI
Sbjct: 238 LAERFEPV-------VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 178 YAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASC---GNLGDSVN--GQLIHGFIVKS 232
SG A +M+ R PN YTL+S + C G D+++ Q+I GF
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF---- 346
Query: 233 GLESFVASQTSLLTMYSRCSMVEDSVKVFN---QLAYASHV-TWTSFVVGLVQNGREEVA 288
GL+ V + +L+ + + +V VF+ ++ + ++ T+ S + G + G + A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 289 VSVFREMIRCSVSPNPFTLSSILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINL 348
V ++ +M+ PN +++++A + + E + I +K + A I
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 349 YGKCGNVDKARSVFDVLTE-----LDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAP 403
G +D A VF + + ++V+ N ++ A+ EA L + I G+
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 404 NGVTFISILLACNNAGLVEEGCQLFAFMKNNHNIELTREHFTCMIDLLGRSK--RFEEAA 461
+ T+ ++L NAGL QL M + + + T + +L K + E AA
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK---SPDEITMNMIILAYCKQGKAERAA 583
Query: 462 MLINEVT------NPDV-----VLWRTLLNACRIHGEIEMAEKI 494
+++ V+ PDV V+W + CR G I + I
Sbjct: 584 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMI 627
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 167/384 (43%), Gaps = 64/384 (16%)
Query: 170 LFTALIAGYAQSGLDGEALEVFREMVDRRVKPNEYTLASTLASCGNLGDSVNGQ------ 223
LF ++I+ Y Q GL A+E+F R+K E+ ++ ++ D++ G+
Sbjct: 113 LFISVISVYRQVGLAERAVEMF-----YRIK--EFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 224 -LIHGFIVKSGLESFVASQTSLLTMYSRCSMVEDSVKVF----NQLAYASHVTWTSFV-- 276
+++ + + G E V + LL + + V+ + K+ N+ V++T+ +
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 277 ---VGLVQNGRE-----EVAVSVF--------------------REMIRCSVSPNPFTLS 308
VGLV+ GRE E VSV+ REM+ +SPN + S
Sbjct: 226 MCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 309 SILQACSSRAMREVGEQIHAITTKLGMEGNKDAGAALINLYGKCGNVDKARSVFDVLT-- 366
+++ + E+ K G N ++L+ G A +++ +
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 367 ---ELDLVSVNSMIYAYAQNGFGYEALQLFKRIKKLGLAPNGVTFISILLACNNAGLVEE 423
+ ++V+ N+++ + +G +A+ +F ++++G +PN T+ S++ G ++
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 424 GCQLFAFMKNN---HNIELTREHFTCMIDLLGRSKRFEEAAMLI----NEVTNPDVVLWR 476
++ M + N+ + +T M++ L R +F+EA LI E P V +
Sbjct: 406 AVYIWNKMLTSGCCPNVVV----YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461
Query: 477 TLLNACRIHGEIEMAEKIMRKVLQ 500
+ G ++ AEK+ R++ Q
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQ 485