Miyakogusa Predicted Gene
- Lj2g3v1454960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1454960.1 Non Chatacterized Hit- tr|I1L4R5|I1L4R5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5268 PE=,76.79,0,Sm-like
ribonucleoproteins,Like-Sm (LSM) domain; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; se,CUFF.37115.1
(2148 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV776929 similar to UniRef100_Q4ABZ2 Cluster: 117M18_28... 533 e-150
gnl|LJGI|DC597623 353 3e-96
gnl|LJGI|AV422180 similar to UniRef100_A6XN19 Cluster: Expressed... 151 2e-35
>gnl|LJGI|AV776929 similar to UniRef100_Q4ABZ2 Cluster: 117M18_28; n=1; Brassica
rapa|Rep: 117M18_28 - Brassica campestris (Field
mustard), partial (4%)
Length = 467
Score = 533 bits (269), Expect = e-150
Identities = 269/269 (100%)
Strand = Plus / Minus
Query: 1880 ctaacaatgctgacaaagctggtggacttcatacgaatattccggcaaaacagcaaggag 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ctaacaatgctgacaaagctggtggacttcatacgaatattccggcaaaacagcaaggag 408
Query: 1940 aaaagaaacctgctgcacagcctcatgcatctaggagtgttctagaagataatatagtac 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aaaagaaacctgctgcacagcctcatgcatctaggagtgttctagaagataatatagtac 348
Query: 2000 ttggtgttgcattggatggatcgaagaggactcttcccattgatgaggggagtgacactg 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ttggtgttgcattggatggatcgaagaggactcttcccattgatgaggggagtgacactg 288
Query: 2060 acacggtgacagcacaagaggccaaggaaatggctgcattccagggtggaaatggatctc 2119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 acacggtgacagcacaagaggccaaggaaatggctgcattccagggtggaaatggatctc 228
Query: 2120 caaaggccgcggatgggaatggcaagtaa 2148
|||||||||||||||||||||||||||||
Sbjct: 227 caaaggccgcggatgggaatggcaagtaa 199
>gnl|LJGI|DC597623
Length = 546
Score = 353 bits (178), Expect = 3e-96
Identities = 178/178 (100%)
Strand = Plus / Plus
Query: 63 gagggtaacaggaagatgcaagttagatttattaagagcaggtctttcgtatcctgtatc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gagggtaacaggaagatgcaagttagatttattaagagcaggtctttcgtatcctgtatc 428
Query: 123 gttcataaaacaggactacagcggttttcaacaacttcgacatataaacaggtcaacaca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gttcataaaacaggactacagcggttttcaacaacttcgacatataaacaggtcaacaca 488
Query: 183 tacattgtcttgcaaaccccgctcttttaagtgtcattgttttatagtgccatgcgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tacattgtcttgcaaaccccgctcttttaagtgtcattgttttatagtgccatgcgga 546
Score = 125 bits (63), Expect = 1e-27
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 atggctcttcctggttccctgcagctgtcccatggatggaacctcggctgcaataaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atggctcttcctggttccctgcagctgtcccatggatggaacctcggctgcaataaacat 280
Query: 61 ccg 63
|||
Sbjct: 281 ccg 283
>gnl|LJGI|AV422180 similar to UniRef100_A6XN19 Cluster: Expressed protein; n=1; Prunus
persica|Rep: Expressed protein - Prunus persica (Peach),
partial (20%)
Length = 424
Score = 151 bits (76), Expect = 2e-35
Identities = 280/348 (80%)
Strand = Plus / Plus
Query: 823 cttgctggtcgtgagatatttacaaacttcctttcaagtgcgatgattcatgccactcgg 882
||||| |||||||||||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 17 cttgcaggtcgtgagatatttacaaacttcctttcaagtgtaatgatccacgcaactcgt 76
Query: 883 ccttttgtggttaatgagtggattcagaccaagatagaaggatatgaggtttctggtact 942
|| |||||||| |||||| ||||| | || ||||| |||||||||||||||||||||
Sbjct: 77 ccatttgtggtgaatgagcggattaaaacgaagattaaaggatatgaggtttctggtaaa 136
Query: 943 gtcgagcatgttggctggtggtcaccaacaattataagaggtgaagatcgtgaagcagta 1002
|| |||||||| || ||||||||||||||| | | ||||||| ||| ||||||||||
Sbjct: 137 gttgagcatgtgggatggtggtcaccaacactagttagaggtgctgattgtgaagcagtt 196
Query: 1003 cacattccaaaccacaaatttacagtgaatgtcgtgcggaacctcagtcaaaaaacacat 1062
|| ||||| || ||||| || | || ||||| ||| |||| || ||| ||| | |||
Sbjct: 197 catattcctaatcacaagttgagtgtaaatgttgtgaggaatcttagtatgaaatctcat 256
Query: 1063 tggcgaatcaaaacccacctagccattagtcatttggatgtaaataagattaataacatt 1122
||||| || || || || || || |||||||| ||||||| | |||||||||| ||
Sbjct: 257 tggcgcattaagactcatcttgctattagtcacatggatgttagcaagattaatagtatc 316
Query: 1123 gttgctgacatgcggaaagtattggccaaaaaccctcaagttgagcag 1170
| ||||| |||||||| || ||||| ||||| |||||||| ||||||
Sbjct: 317 atagctgatatgcggaaggttttggcgaaaaatcctcaagtagagcag 364