Miyakogusa Predicted Gene
- Lj2g3v1280010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1280010.1 Non Chatacterized Hit- tr|B9S4J7|B9S4J7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,25.91,2e-18,seg,NULL,NODE_26427_length_1950_cov_33.454357.path1.1
(472 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g11880.1 416 e-116
Glyma08g41200.1 312 7e-85
Glyma10g12960.1 292 7e-79
Glyma18g15180.1 253 2e-67
Glyma01g05560.1 228 8e-60
Glyma01g23850.1 197 1e-50
Glyma03g08650.1 167 3e-41
>Glyma02g11880.1
Length = 410
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 253/441 (57%), Positives = 281/441 (63%), Gaps = 74/441 (16%)
Query: 22 NNNNLLRDASFSSYLNNKEETFADSSHPF--TRKDPLHQGVKKEDDEEIGVFEAEKYFHG 79
NNN LRDASFSSYLNNKEE +S H + +RKDPL GVKKEDD EIGVFEAEKYF+G
Sbjct: 7 NNNYHLRDASFSSYLNNKEEILTESGHGYVSSRKDPL--GVKKEDDGEIGVFEAEKYFNG 64
Query: 80 GEIGS-PRVAIIGASKYQHQKKEETAQETRRYKVLYGTPSVRSESSLNSQSALLPXXXXX 138
EIGS PRVA A+K++ QK E+TA TR+YKV GTPSVRSESSLNSQSALL
Sbjct: 65 EEIGSPPRVADNDANKHRPQKDEQTALVTRKYKVQNGTPSVRSESSLNSQSALLQSAVRN 124
Query: 139 XXXXXXXXXXXXXFLAGLGCKCYCSDKNSVDISDHAAGEISFNKAATYGAVHGKRTSKKL 198
FLAGLGCKCYCSDKNSVDISDHA
Sbjct: 125 SSRNMKSKLHRKSFLAGLGCKCYCSDKNSVDISDHA------------------------ 160
Query: 199 INTDADSNHSAKATKPH-AEIFINKDVYFQKPEK----------LPFSTVNSSSGNQPLK 247
K T+PH AEI INKDVYFQ+PEK L S +NSSSGN P K
Sbjct: 161 ----------VKVTRPHAAEISINKDVYFQRPEKLGVGLSKENSLALSGLNSSSGNNPAK 210
Query: 248 VQI-QVEKPRKSLEVFGSPILDNISKSVSFDRRL---SMPSWE----------SANSVGN 293
+Q+ QVEK R SLEVFGSPIL + SKS+SFD+RL S SW+ SANS GN
Sbjct: 211 MQLQQVEKSRNSLEVFGSPILSSRSKSLSFDKRLAKTSSSSWDAAPKIEETDFSANSGGN 270
Query: 294 FXXXXXXXXXXXLFEIDSFTGKSNP-FLGKSTSNIASGCASPTTCYAPSEASIAWSVVTA 352
+ LFEI+S TGKSN FLG+S+SN+ S CASPTTCYAPSE SI WSV TA
Sbjct: 271 Y-NDADSDASSDLFEIESLTGKSNSFFLGRSSSNVVSSCASPTTCYAPSEVSIEWSVATA 329
Query: 353 SAV------DFDDQRSVATIRSPIRTSSLTSSNVKPK-AGKEMQRRHSSNLLGCKSQKAV 405
SA+ D+DDQRS+ T RSPI T+SL SSN KPK KE QRR S LLGCKSQKAV
Sbjct: 330 SALEYSAMSDYDDQRSIGTTRSPI-TTSLVSSNGKPKVVVKETQRRRPSMLLGCKSQKAV 388
Query: 406 GVAVDAFTTCEKPGSTPQIRR 426
GVA+DAFTT EK S RR
Sbjct: 389 GVALDAFTTYEKTSSNANSRR 409
>Glyma08g41200.1
Length = 472
Score = 312 bits (799), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 217/494 (43%), Positives = 276/494 (55%), Gaps = 66/494 (13%)
Query: 23 NNNLLRDASFSSYLNNKEE------TFADSSHPFT-RKDPLHQGVKKEDDEEIGVFEAEK 75
NNN L DA+FS YLN E + S K PL + KKE++ EIGVF AEK
Sbjct: 1 NNNHLYDATFSPYLNGNNEGTTIVGRLGEPSQKLNPLKSPLQKLEKKEENGEIGVFGAEK 60
Query: 76 YFHGGEIGSPR--VAIIGASKYQHQKKEETAQ--ETRRYKVLYGTPSVRSESS-LNSQSA 130
YF+ E+ +PR + I KY H++++E TR++ + YGTPS+RSES+ NSQSA
Sbjct: 61 YFNV-EVETPRSTTSSIATPKYLHRQRDEPMAIIATRKHGLPYGTPSIRSESTTCNSQSA 119
Query: 131 LLPXXXXXXXXXXXXXX------XXXXFLAGLGCKCYCSDKNSVDISDHAAGEISFNKAA 184
LL LAGL KC CSDK+SVD AGEISF+K A
Sbjct: 120 LLQSGMMMRNSLRNKKDNNKKGHQAKSVLAGLSFKCSCSDKDSVD-----AGEISFSKPA 174
Query: 185 TYGAVHGKRTSKKLINTDA-DSNHSAKATKPHAEIFINKDVYFQKPEKLPFSTVNSSSGN 243
TYGAVH K+T +KL++ A D++HS K +KP+AE+ +VYFQ E
Sbjct: 175 TYGAVHDKKTRRKLVDIAALDASHSIKISKPNAELLKINNVYFQTQED------------ 222
Query: 244 QPLKVQIQVEKPRKSLEVFGSP-ILDNISKSVSFDR---RLSMPSWESAN--------SV 291
++ EKPR S+EVFGSP IL N KS+SFDR R +M S
Sbjct: 223 ----EVVEAEKPRNSIEVFGSPTILKNKLKSLSFDRTTTRFAMASSRDGTPRLLLEEIDH 278
Query: 292 GNFXXXXXXXXXXXLFEIDSFTGKSNPFLGKSTSNIA-SGCASPTTCYAPSEASIAWSVV 350
N+ LFEI+S K+NPFL + TS+ A S C SPT YAPSEASI WSV
Sbjct: 279 SNYINDAASDASSDLFEIESIKSKTNPFLARQTSDAAASSCVSPTNGYAPSEASIEWSVA 338
Query: 351 TASAV---DFDDQRSVATIRSPIRTSSLTS-SNVKPKAG-KEMQR-RHSSNLLGCKSQKA 404
TASA D ++Q S TIRSPIRT++ T+ +N K K+ KE+QR R S LLGCK+ K+
Sbjct: 339 TASAAVMSDCEEQMSEVTIRSPIRTTTKTTFANGKAKSTTKEVQRIRRPSMLLGCKNHKS 398
Query: 405 VGVAVDAFTTCEKPGSTPQIRRKSEMFPHVTKLQGGAKEENFGAKHGQQHVYAKRTPSPR 464
V VA DA+ T E P STP++R ++ V + K NFGAKHGQ H +A TPSP
Sbjct: 399 VRVAGDAYITYENPSSTPKLRSRTNSSSQVARFPSETKLGNFGAKHGQHHHHAYATPSPL 458
Query: 465 A------SSQLLYI 472
+S+LLYI
Sbjct: 459 QHSHSPHASKLLYI 472
>Glyma10g12960.1
Length = 280
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 194/283 (68%), Gaps = 23/283 (8%)
Query: 1 MVI-TATPSNSSLHHLKTFNSQNNNNLLRDASFSSYLNNKEETFADSSHPFT--RKDPLH 57
MVI TAT +N+++H L++FNS NNN LRDASFSSYLNNKEE A+S H + RKDPL
Sbjct: 1 MVISTATSNNNNIHQLQSFNSHNNNYHLRDASFSSYLNNKEEILAESGHGYVNNRKDPL- 59
Query: 58 QGVKKEDDEEIGVFEAEKYFHGGEIGS-PRVAIIGASKYQHQKKEETAQETRRYKVLYGT 116
GVKKE D EIGVFEAEKYF+G EI S PRVA A+K++ QK E+T TR+YKV GT
Sbjct: 60 -GVKKEYDGEIGVFEAEKYFNGEEIESPPRVANNDANKHRPQKDEQTTLVTRKYKVQNGT 118
Query: 117 PSVRSESSLNSQSALLPXXXXXXXXXXXXXXXXXXFLAGLGCKCYCSDKNSVDISDHAAG 176
PSVRSESSLNSQSALL FL GLGCKCYCSDKN VDIS H AG
Sbjct: 119 PSVRSESSLNSQSALLRSAVTNSSRNMKSKLHRKSFLVGLGCKCYCSDKNYVDISHH-AG 177
Query: 177 EISFNKAATYGAVHGKRTSKKLINTDADSNHSAKATKPH-AEIFINKDVYFQKPEKLPFS 235
EISF+K ++ HGK TS+ + N D +NHS K T+PH AEI INKDVYFQ PEKL
Sbjct: 178 EISFSKNSS----HGKTTSRNMFNADPKANHSVKVTRPHAAEISINKDVYFQSPEKLGVG 233
Query: 236 T----------VNSSSGNQPLKVQ-IQVEKPRKSLEVFGSPIL 267
+NSS GN P K+Q +QVEK R SLEVFGSPIL
Sbjct: 234 LSKENSLALLGLNSSLGNNPAKMQLLQVEKSRNSLEVFGSPIL 276
>Glyma18g15180.1
Length = 465
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 215/522 (41%), Positives = 265/522 (50%), Gaps = 107/522 (20%)
Query: 1 MVITATPSNS-SLHH-LKTFNSQNNNNL-LRDASFSSYLN-NKEETF--------ADSSH 48
MV T + S S + HH L TFNS+NN N L DA+FS YLN N E T +
Sbjct: 1 MVTTISSSTSRNFHHQLHTFNSENNINNNLFDATFSPYLNGNNEGTIIVGKLGEPSQKLK 60
Query: 49 PFTRKDPLHQGVKKEDDEEIGVFEAEKYFHGGEIGSPR-VAIIGASKYQHQKKEETAQET 107
PF K PL + KKE++ EIGVF AEKYF+ E+ +PR V I KY H + E+ A T
Sbjct: 61 PF--KSPLQKLEKKEENGEIGVFGAEKYFNV-EVETPRSVNCITTPKYLHHRDEQMAIAT 117
Query: 108 RRYKVLYGTPSVRSES-SLNSQSALLPXXXXXXXXXXXXXX----XXXXFLAGLGCKCYC 162
R+ + YGTPS+RSES + NSQ ALL LAGLG KC
Sbjct: 118 RKNTLPYGTPSIRSESTTCNSQHALLQSGMMMRNSSRSKKENKGHQAKSVLAGLGFKC-- 175
Query: 163 SDKNSVDISDHAAGEISFNKAATYGAVHGKRTSKKLINTDADSNHSAKATKPHAEIFINK 222
S A PH F+ K
Sbjct: 176 ---------------------------------------------SFSANLPHMVQFMEK 190
Query: 223 -DVYFQKPEKLPFSTVNSSSGNQP--LKVQ-------IQVEKPRKSLEVFGSPILDNISK 272
+ FQK L FS ++S+SGNQ K+Q ++ EKPR S+EVFGSPIL N K
Sbjct: 191 LEESFQK--LLSFSPLSSASGNQNHLAKMQQHQQLDEVEAEKPRNSIEVFGSPILKNKLK 248
Query: 273 SVSFDR---RLSMPS--------WESANSVGNFXXXXXXXXXXXLFEIDSFTGKSNPFLG 321
S+SFDR R M S E +S N+ LFEI+S K+NPF
Sbjct: 249 SLSFDRTTTRFVMASSRDGTPRLLEEIDS--NYINDAASDASSDLFEIESIKSKTNPFHA 306
Query: 322 KSTSNI-ASGCASPTTCYAPSEASIAWSVVTASAV---DFDDQRSVATIRSPIRTSSLTS 377
+ TS++ AS C SPT YAPSEASI WSV TASA D ++Q S TIRSPIRT++
Sbjct: 307 RQTSDVAASSCVSPTNGYAPSEASIEWSVATASAAVMSDCEEQMSEVTIRSPIRTTTF-- 364
Query: 378 SNVKPKAGKEMQR-RHSSNLLGCKSQKAVGVAVDAFTTCEKPGSTPQIRRKSEMFPHVTK 436
+N K K+ KE+QR R S LLGCKS K+V VA DA+ T E P STP++R ++ V +
Sbjct: 365 ANGKAKSTKEVQRIRRPSMLLGCKSHKSVRVAGDAYITYENPSSTPKLRNRTNSSSMVAR 424
Query: 437 LQGGAKEENFGAKHGQQHVYAKRTP------SPRASSQLLYI 472
K NFGAKHG H YA +P SP A S+LLYI
Sbjct: 425 FPSETKLGNFGAKHGHHHAYATPSPLQNSHSSPHA-SKLLYI 465
>Glyma01g05560.1
Length = 372
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 129/223 (57%), Positives = 153/223 (68%), Gaps = 20/223 (8%)
Query: 237 VNSSSGNQPLKVQIQ-VEKPRKSLEVFGSPILDNISKSVSFDRRLS-MPSWE-------- 286
++ +GN LK+Q+Q VEK R SLEVFGSPIL +KS+SFD+RL+ SW+
Sbjct: 150 ISDHTGNHLLKMQLQQVEKSRNSLEVFGSPILSIRNKSLSFDKRLAKTSSWDDAPKIEET 209
Query: 287 --SANSVGNFXXXXXXXXXXXLFEIDSFTGKSNPFLGKSTSNIASGCASPTTCYAPSEAS 344
SA S GN+ LFEI+S TGKSN FLG+STSN+ S CASPTTCYAPSE S
Sbjct: 210 DFSAKSGGNYNDADSDASSD-LFEIESLTGKSNTFLGRSTSNVVSSCASPTTCYAPSEVS 268
Query: 345 IAWSVVTASAV------DFDDQRSVATIRSPIRTSSLTSSNVKPKAGKEMQRRHSSNLLG 398
I WSV TASA+ D+DDQRS+AT RSPIRT S+ SSN KPK KEMQRR S LLG
Sbjct: 269 IEWSVATASALEYSAMSDYDDQRSIATTRSPIRT-SIVSSNAKPKVIKEMQRRRPSMLLG 327
Query: 399 CKSQKAVGVAVDAFTTCEKPGSTPQIRRKSEMFPHVTKLQGGA 441
CKSQKAVGVAV+AFTT EK S R +S+ FP VT+ + G+
Sbjct: 328 CKSQKAVGVAVNAFTTYEKTSSNTNSRCRSDTFPQVTETKEGS 370
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 113/160 (70%), Gaps = 5/160 (3%)
Query: 22 NNNNLLRDASFSSYLNNKEETFADSSHPF--TRKDPLHQGVKKEDDEEIGVFEAEKYFHG 79
NNN LRDASFSSYLNNK+E A+S H + +RK+PL GVKKEDD EIGVFEAEKYF+G
Sbjct: 1 NNNYHLRDASFSSYLNNKKEILAESGHGYVSSRKEPL--GVKKEDDGEIGVFEAEKYFNG 58
Query: 80 GEIGS-PRVAIIGASKYQHQKKEETAQETRRYKVLYGTPSVRSESSLNSQSALLPXXXXX 138
E+ S PR+A A+K+ QK E+T TR+YKV YGTPSVRSESSLNSQSALL
Sbjct: 59 EEMESPPRIADNDANKHLPQKDEQTVLVTRKYKVQYGTPSVRSESSLNSQSALLQSAVRN 118
Query: 139 XXXXXXXXXXXXXFLAGLGCKCYCSDKNSVDISDHAAGEI 178
FLAGLGCKCYCSDKNSVDISDH +
Sbjct: 119 SSRNMKSKLQRKSFLAGLGCKCYCSDKNSVDISDHTGNHL 158
>Glyma01g23850.1
Length = 316
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/290 (48%), Positives = 162/290 (55%), Gaps = 64/290 (22%)
Query: 22 NNNNLLRDASFSSYLNNKEETFADSSHPF--TRKDPLHQGVKKEDDEEIGVFEAEKYFHG 79
NNN L SFSSYLNNKE+ A+S H + +RKDPL GVKKEDD EIGVFEAEKYF+G
Sbjct: 1 NNNYHLCGTSFSSYLNNKEDILAESGHGYVSSRKDPL--GVKKEDDGEIGVFEAEKYFNG 58
Query: 80 GEIGSP-RVAIIGASKYQHQKKEETAQETRRYKVLYGTPSVRSESSLNSQSALLPXXXXX 138
EI SP RVA A+K++ QK E+TA TR+YKV GTPSVRSESSLNSQSALL
Sbjct: 59 EEIESPPRVADNDANKHRPQKDEQTALVTRKYKVQNGTPSVRSESSLNSQSALLQSVVRN 118
Query: 139 XXXXXXXXXXXXXFLAGLGCKCYCSDKNSVDISDHAAGEISFNKAATYGAVHGKRTSKKL 198
FLAGLGCKCYCSDKNSVDIS
Sbjct: 119 SSRNMKSKLHRKSFLAGLGCKCYCSDKNSVDISH-------------------------- 152
Query: 199 INTDADSNHSAKATKPHAEIFINKDVYFQKPEKLPFSTVNSSSGNQPLKVQIQ-VEKPRK 257
HAE V K L S++NSS GN K+++Q VEK R
Sbjct: 153 ----------------HAEKL---GVGLSKENSLALSSLNSSPGNNSAKMKLQQVEKSRN 193
Query: 258 SLEVFGSPILDNISKSVSFDRRLSM---PSWE----------SANSVGNF 294
SLEVFGSPIL + SKS+SFD++L SW+ SANS GN+
Sbjct: 194 SLEVFGSPILSSRSKSLSFDKKLVKTYSSSWDAAPKIEEIDFSANSGGNY 243
>Glyma03g08650.1
Length = 283
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 126/224 (56%), Gaps = 46/224 (20%)
Query: 70 VFEAEKYFHGGEIGSP-RVAIIGASKYQHQKKEETAQETRRYKVLYGTPSVRSESSLNSQ 128
+FEAEKYF+G EI SP RVA A+K++ QK E+TA TR+YKV GTPSVRSESSLNSQ
Sbjct: 29 LFEAEKYFNGEEIESPPRVADNDANKHRPQKDEQTALVTRKYKVQNGTPSVRSESSLNSQ 88
Query: 129 SALLPXXXXXXXXXXXXXXXXXXFLAGLGCKCYCSDKNSVDISDHAAGEISFNKAATYGA 188
SALL FLAGLGCKCYCSDKNSVDIS HA
Sbjct: 89 SALLKSAVRNSSRNMKSKLHRKSFLAGLGCKCYCSDKNSVDISHHA-------------- 134
Query: 189 VHGKRTSKKLINTDADSNHSAKATKPHA-EIFINKDVYFQKPEKLPFSTVNSSSGNQPLK 247
K T+PHA +I I KDVYFQ PEKL +S L
Sbjct: 135 --------------------VKVTRPHATKISIKKDVYFQSPEKLGVGLSKENS----LA 170
Query: 248 VQIQVEKPRKSLEVFGSPILDNISKSVSFDRRL---SMPSWESA 288
+ EK R SLEVFGSPIL + SKS+SFD++L S SW+ A
Sbjct: 171 LS---EKSRNSLEVFGSPILSSRSKSLSFDKKLAKTSSSSWDVA 211