Miyakogusa Predicted Gene

Lj2g3v1280010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1280010.1 Non Chatacterized Hit- tr|B9S4J7|B9S4J7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,25.91,2e-18,seg,NULL,NODE_26427_length_1950_cov_33.454357.path1.1
         (472 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G02950.1 | Symbols: PKS1 | phytochrome kinase substrate 1 | c...   137   1e-32
AT1G14280.1 | Symbols: PKS2 | phytochrome kinase substrate 2 | c...   111   1e-24

>AT2G02950.1 | Symbols: PKS1 | phytochrome kinase substrate 1 |
           chr2:855149-856468 REVERSE LENGTH=439
          Length = 439

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 170/397 (42%), Gaps = 89/397 (22%)

Query: 36  LNNKEETFADSSHPFTRKDPLHQGVKKEDDEEIGVFEAEKYFHGGEIGSPRVAIIGASKY 95
           +N K+E F D      +K P        +D EIGVF AEKYF+G        +++  +  
Sbjct: 60  INPKQEEFGDEKK-MVKKAP--------EDPEIGVFGAEKYFNGDMDSDQGSSVLSLT-- 108

Query: 96  QHQKKEETAQETRR-YKVLYGTPSVRSESSLNSQSALL------------PXXXXXXXXX 142
            + + E T  ++++  K   GTPSVRSESS NSQS LL                      
Sbjct: 109 -NPEVERTVVDSKQSAKKSTGTPSVRSESSWNSQSVLLQNKLVNSCNSSFKEKKNSNGQI 167

Query: 143 XXXXXXXXXFLAGLGCKCYCSDKNSVDISDHAAGEISFNKAATYGAVHGKRTSKKLINTD 202
                    FLA LGCKC CSD +SVD+ +  +                       +   
Sbjct: 168 QKVTNNKKSFLANLGCKCACSDGDSVDVEEKTS-----------------------VKRS 204

Query: 203 ADSNHSAKATKPHAEIFINKDVYFQKPEKLPFSTVNSSSGNQPLKVQIQVE-KPRKSLEV 261
           AD N S    +  A++                         + +K+Q Q E   RKSLEV
Sbjct: 205 ADPNISVITMRSSADM-----------------------NTELIKIQKQEELSQRKSLEV 241

Query: 262 FGSPILDNISKSVSFDRRLSMPSWESANSVGNFXXXXXXXXXXXLFEIDSFTGKSNPFLG 321
           FGSP+      SV   ++L +P W+S     +            LFEI+  TG   PFL 
Sbjct: 242 FGSPVAIEKKSSV-VQKKLPLPPWKSRTEEDD-TKSEGSDSSSDLFEIEGLTGNPKPFLT 299

Query: 322 KSTSNIASGCASPTTCYAPSEASIAWSVVTASAVDFDDQRSVATIRSPIRTSSLTSSNVK 381
           +  S+ AS      TCYAPSE S+ WS+VTASA DF      AT  SP+R +  T     
Sbjct: 300 RQGSDPAS-----PTCYAPSEVSVEWSIVTASAADFSVMSECAT--SPVRRNRPTQIPRI 352

Query: 382 PKAGKEM-QRRHSSN-------LLGCKSQKAVGVAVD 410
           P   K   QRR SS+       L+ CKS K+V V+ D
Sbjct: 353 PITAKSAPQRRKSSSSSGGNGFLMSCKSHKSVMVSGD 389


>AT1G14280.1 | Symbols: PKS2 | phytochrome kinase substrate 2 |
           chr1:4877657-4878985 FORWARD LENGTH=442
          Length = 442

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 169/413 (40%), Gaps = 103/413 (24%)

Query: 54  DPLHQGVKKEDDEEIGVFEAEKYFHG-----------GEIGSPRVAIIGASKYQHQKKEE 102
           D L    K  +D EI VF AEKYF+G             +  P V I        Q  + 
Sbjct: 61  DVLGINKKASEDLEISVFGAEKYFNGDMDSDHSPRLVSPLPDPEVPIERIFVGPKQSSKN 120

Query: 103 TAQETRRYKVLYGTPSVRSESSLNSQSALLPXX------------------XXXXXXXXX 144
           +++          TPS+RSESS NSQS LL                              
Sbjct: 121 SSE----------TPSLRSESSWNSQSLLLQSKYVEKKKNIKKNSSCNSYFQEKDMSSNH 170

Query: 145 XXXXXXXFLAGLGCKCYCSDKNSVDISDHAAGEISFNKAATYGAVHGKRTSKKLINTDAD 204
                  FLA LGC+C CS+ +SVD+ D         K  T  +  G  +S+  I+    
Sbjct: 171 KVSNKKSFLATLGCRCVCSNWSSVDVVDDKRRSSGLKKIKTQLSFSGDLSSEMKIHQ--- 227

Query: 205 SNHSAKATKPHAEIFINKDVYFQKPEKLPFSTVNSSSGNQPLKVQIQVEKPRKSLEVFGS 264
                                 Q+ E +                   +E+ RKSLE+FGS
Sbjct: 228 ----------------------QQQEAM-------------------LEQ-RKSLEIFGS 245

Query: 265 PILDN--ISKSVSFDRRLSMPSWESANSVG--NFXXXXXXXXXXXLFEIDSFTGKSNPFL 320
           P+++   I K   ++   S    E   SV                LFEI+S TGK+NPFL
Sbjct: 246 PLIEKRIIQKKFPWEYSSSAKKEEHGFSVKYEEEEDGSVSDVSTDLFEIESLTGKANPFL 305

Query: 321 GKSTSNIASGCASPTTCYAPSEASIAWSVVTASAVDFDDQRSVATIRSPI---RTSSLTS 377
            +  S   S   SP   YAPSE SI WSVVTAS  DF      AT  SP+   R+  +  
Sbjct: 306 ARQGS---SDPDSPDG-YAPSEVSIQWSVVTASVADFSVMSECAT--SPVKKNRSFQIPR 359

Query: 378 SNVKPKAGKEM--QRRHSSN---LLGCKSQKAVGVAVDAFTTCEK-PGSTPQI 424
             +  K+ +E+  QRR SS+   L+GCKS K+V V+ D++T+  + P   P+ 
Sbjct: 360 IPIMAKSNREIAPQRRKSSSSGLLMGCKSHKSVRVSGDSYTSMNRTPSYVPRF 412