Miyakogusa Predicted Gene
- Lj2g3v1255060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1255060.1 Non Chatacterized Hit- tr|I1KTE1|I1KTE1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22973
PE,84.94,0,Cellulose_synt,Cellulose synthase; ZF_RING_2,Zinc finger,
RING-type; RING/U-box,NULL; no description,CUFF.36611.1
(1929 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65207 similar to UniRef100_A7Q795 Cluster: Chromosome... 741 0.0
gnl|LJGI|BU494216 homologue to UniRef100_Q6DUJ2 Cluster: CesA2; ... 92 2e-17
gnl|LJGI|TC72916 homologue to UniRef100_Q6DUJ2 Cluster: CesA2; n... 88 2e-16
gnl|LJGI|AV410357 homologue to UniRef100_Q2IB40 Cluster: Cellulo... 84 4e-15
gnl|LJGI|TC68219 84 4e-15
gnl|LJGI|TC66434 similar to UniRef100_Q6DUJ2 Cluster: CesA2; n=1... 84 4e-15
gnl|LJGI|TC81605 similar to UniRef100_Q2IB41 Cluster: Cellulose ... 72 1e-11
>gnl|LJGI|TC65207 similar to UniRef100_A7Q795 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 1004
Score = 741 bits (374), Expect = 0.0
Identities = 623/706 (88%)
Strand = Plus / Plus
Query: 1150 ctatctatccttgcagttgactatccaattgataaagttgcatgctatgtctcagatgat 1209
|||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 ctatctatccttgctgttgattatccagttgataaagttgcatgctatgtctcagatgat 60
Query: 1210 ggtgctgccatgcttacttttgaggcactttctgagacatctgaatttgccagaagatgg 1269
|||||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 61 ggtgctgctatgcttacttttgaagcactttctgagacatctgaatttgctaggagatgg 120
Query: 1270 gtgccattttgtaaaaaatacaatattgagccccgagctccagaatggtatttcaatcag 1329
|| ||||||||||| ||||||||||||||||||||||| ||||||||||||||| || |
Sbjct: 121 gtcccattttgtaagaaatacaatattgagccccgagccccagaatggtatttcggtctg 180
Query: 1330 aagattgattatctgaaaaataaagttcatccagcttttgtcagggaaaggagagcaatg 1389
|||||||| ||||||| ||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 181 aagattgactatctgagaaataaagtacatccagcatttgttagggaaagaagagcaatg 240
Query: 1390 aagagagattatgaagaatttaaggttaggataaacagtttggtggcaactgcacagaag 1449
||||| ||||||||||||||||| || | ||| |||||| |||| ||||| ||| |||
Sbjct: 241 aagagggattatgaagaatttaaagtgaagattaacagtctggttgcaacagcaacaaag 300
Query: 1450 gttcctgaggatggggggacaatgcaggatgggactccgtggcctggaaataatgtgagg 1509
|||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| ||
Sbjct: 301 gttcctgaggatggttggaccatgcaggatgggactccatggcctggaaataatgtgcgg 360
Query: 1510 gaccatcctggcatgattcaggtatttcttggtcaggatggtgttcgtgatattgaagga 1569
|| |||||||| ||||||||||| || |||||||| ||||||||||| ||| ||||||||
Sbjct: 361 gatcatcctggaatgattcaggtcttccttggtcatgatggtgttcgagatgttgaagga 420
Query: 1570 catgagttgcctcgcctagtttatgtttctagagaaaagcggccaggctttgatcatcac 1629
|||| ||||| ||| | || ||| ||| |||||||| ||||||| |||||||| |||
Sbjct: 421 aatgaattgccacgcttggtctattgctctcgagaaaagaggccaggttttgatcaccac 480
Query: 1630 aaaaaggctggggcaatgaattctctggtacgagtgtctgcagtcatctcaaacgcgcct 1689
|||||||| ||||| |||||| || || | || | || ||| | ||||| || || |||
Sbjct: 481 aaaaaggccggggctatgaatgctttgatgcgggcatcagcaattatctcgaatgcacct 540
Query: 1690 tatgttctgaatgttgattgtgatcactacataaacaatagcaaggcacttagagaagcc 1749
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 541 tatcttctgaatgttgattgtgatcactacatcaacaatagcaaggcacttagagaagcc 600
Query: 1750 atgtgtttcatgatggaccctcaaggtggaaaaaatatttgctatgtacaatttcctcaa 1809
|||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||| ||
Sbjct: 601 atgtgttttatgatggaccctcaacttgggaaaaagatttgctatgtacaatttccccag 660
Query: 1810 agatttgatgggattgaccggcatgatagatattcaaacaggaatg 1855
||||||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 661 agatttgatggaattgatcggcatgatagatactcaaacagaaatg 706
>gnl|LJGI|BU494216 homologue to UniRef100_Q6DUJ2 Cluster: CesA2; n=1; Acacia
mangium|Rep: CesA2 - Acacia mangium, partial (13%)
Length = 419
Score = 91.7 bits (46), Expect = 2e-17
Identities = 109/130 (83%)
Strand = Plus / Plus
Query: 1697 tgaatgttgattgtgatcactacataaacaatagcaaggcacttagagaagccatgtgtt 1756
||||| ||||||||||||||||||||||||| |||||||| | |||||||| ||||| |
Sbjct: 29 tgaatcttgattgtgatcactacataaacaacagcaaggccttgagagaagcaatgtgct 88
Query: 1757 tcatgatggaccctcaaggtggaaaaaatatttgctatgtacaatttcctcaaagatttg 1816
| |||||||| ||| | ||| |||||| |||||||||| || ||||| || || ||||
Sbjct: 89 ttatgatggatcctaaccttggtaaaaatgtttgctatgtccagtttccgcagaggtttg 148
Query: 1817 atgggattga 1826
|||| |||||
Sbjct: 149 atggtattga 158
>gnl|LJGI|TC72916 homologue to UniRef100_Q6DUJ2 Cluster: CesA2; n=1; Acacia
mangium|Rep: CesA2 - Acacia mangium, partial (22%)
Length = 697
Score = 87.7 bits (44), Expect = 2e-16
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 1703 ttgattgtgatcactacataaacaatagcaaggcacttagagaagccatgtgtttcatga 1762
||||||||||||||||||||||||| |||||||| | |||||||| ||||| || ||||
Sbjct: 3 ttgattgtgatcactacataaacaacagcaaggccttgagagaagcaatgtgctttatga 62
Query: 1763 tggaccctcaaggtggaaaaaatatttgctatgtacaatttcctcaaagatttgatggga 1822
|||| ||| | ||| |||||| |||||||||| || ||||| || || |||||||| |
Sbjct: 63 tggatcctaaccttggtaaaaatgtttgctatgtccagtttccgcagaggtttgatggta 122
Query: 1823 ttga 1826
||||
Sbjct: 123 ttga 126
>gnl|LJGI|AV410357 homologue to UniRef100_Q2IB40 Cluster: Cellulose synthase 4; n=1;
Eucalyptus grandis|Rep: Cellulose synthase 4 - Eucalyptus
grandis (Flooded gum), partial (11%)
Length = 362
Score = 83.8 bits (42), Expect = 4e-15
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 1141 aatactgttctatctatccttgcagttgactatccaattgataaagttgcatgctatgtc 1200
||||| || |||||||| |||||||||||||| ||| | ||||| || | |||||||||
Sbjct: 120 aataccgtactatctattcttgcagttgactacccagtggataaggtctcctgctatgtc 179
Query: 1201 tcagatgatggtgctgccatgcttacttttgaggcactttctgagacatc 1250
|| |||||||||||||| ||| | || ||||| |||||| ||||||||||
Sbjct: 180 tctgatgatggtgctgcgatgttgacatttgaagcacttgctgagacatc 229
>gnl|LJGI|TC68219
Length = 605
Score = 83.8 bits (42), Expect = 4e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 1 atgaacaccggtggtcgactcattgctggttcgcacaacaggaacgagttcgtgctcatc 60
|||||||||||||| |||||||||||||||| || ||| |||||||||| |||||||||
Sbjct: 540 atgaacaccggtggaagactcattgctggttctcataaccggaacgagtttgtgctcatc 599
Query: 61 aatgcc 66
||||||
Sbjct: 600 aatgcc 605
>gnl|LJGI|TC66434 similar to UniRef100_Q6DUJ2 Cluster: CesA2; n=1; Acacia mangium|Rep:
CesA2 - Acacia mangium, partial (71%)
Length = 2954
Score = 83.8 bits (42), Expect = 4e-15
Identities = 255/326 (78%)
Strand = Plus / Plus
Query: 1087 gacatctttgtcagtacagttgatcccatgaaagaaccaccactgataactgcaaatact 1146
||||| ||||||||||| |||||||| | || || || ||||| | ||||| ||||||
Sbjct: 1377 gacatttttgtcagtactgttgatccattaaaggagccgccactcgtgactgccaatact 1436
Query: 1147 gttctatctatccttgcagttgactatccaattgataaagttgcatgctatgtctcagat 1206
|| |||||||| ||||| |||||||| ||| | ||||| || | || |||||||| |||
Sbjct: 1437 gtgctatctattcttgctgttgactacccagtagataaggtctcctgttatgtctctgat 1496
Query: 1207 gatggtgctgccatgcttacttttgaggcactttctgagacatctgaatttgccagaaga 1266
||||||||||| ||| | || ||||| || || |||||||||| |||||| | || | |
Sbjct: 1497 gatggtgctgctatgttgacatttgaagctctggctgagacatcagaattttcaaggaaa 1556
Query: 1267 tgggtgccattttgtaaaaaatacaatattgagccccgagctccagaatggtatttcaat 1326
||||| || || || || ||||| ||||| |||||||| || || | |||||
Sbjct: 1557 tgggttcctttctgcaagaaatattcaattgaaccccgagcacctgagttctatttttca 1616
Query: 1327 cagaagattgattatctgaaaaataaagttcatccagcttttgtcagggaaaggagagca 1386
|||||||||| || ||||| |||| ||||| ||| | ||||||| || | ||||||
Sbjct: 1617 aagaagattgactacttgaaagataaggttcaaccatcatttgtcaaagatcgtagagca 1676
Query: 1387 atgaagagagattatgaagaatttaa 1412
||||||||||| ||||||||||||||
Sbjct: 1677 atgaagagagaatatgaagaatttaa 1702
>gnl|LJGI|TC81605 similar to UniRef100_Q2IB41 Cluster: Cellulose synthase 3; n=1;
Eucalyptus grandis|Rep: Cellulose synthase 3 - Eucalyptus
grandis (Flooded gum), partial (39%)
Length = 1281
Score = 71.9 bits (36), Expect = 1e-11
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 1705 gattgtgatcactacataaacaatagcaaggcacttagagaagccatgtgtttcatgatg 1764
||||||||||| || || || || |||||||| | ||||| |||||||| ||| |||||
Sbjct: 12 gattgtgatcattatatcaataacagcaaggctgtcagagaggccatgtgcttcttgatg 71
Query: 1765 gaccctcaaggtggaaaaaatatttgctatgtacaatttcctcaaagatttgatgg 1820
||||||||| ||| || || |||||||||| || |||||||| |||||||||||
Sbjct: 72 gaccctcaaactgggaagaaggtttgctatgttcagtttcctcagagatttgatgg 127