Miyakogusa Predicted Gene

Lj2g3v1252680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1252680.1 Non Characterized Hit- tr|B4FQC0|B4FQC0_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,84.31,2e-16,Ureide_permease,Ureide permease; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.36590.1
         (402 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g044710.1 | ureide permease-like protein | HC | chr5:19620...   656   0.0  
Medtr5g045530.1 | ureide permease-like protein | HC | chr5:19977...   631   0.0  
Medtr5g045520.2 | ureide permease-like protein | HC | chr5:19975...   592   e-169
Medtr5g045520.1 | ureide permease-like protein | HC | chr5:19976...   592   e-169
Medtr5g045520.3 | ureide permease-like protein | HC | chr5:19975...   592   e-169
Medtr5g044710.2 | ureide permease-like protein | HC | chr5:19621...   513   e-145

>Medtr5g044710.1 | ureide permease-like protein | HC |
           chr5:19620378-19623960 | 20130731
          Length = 397

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/402 (81%), Positives = 343/402 (85%), Gaps = 5/402 (1%)

Query: 1   MYMVESKGGAIVCMLLSLLFLGTWPAVMTLLERRGRLPQHTYLDYTLTNLLAAVIIAFTF 60
           MYMVES+GGAIVCML+SL FLGTWPAVMTLLERRGRLPQHTYLDYT+TNLLAAVIIAFTF
Sbjct: 1   MYMVESRGGAIVCMLVSLFFLGTWPAVMTLLERRGRLPQHTYLDYTITNLLAAVIIAFTF 60

Query: 61  GQIGSDQPNFLSQFSQDNFPSVLFAMAGGVVLSVGNLSTQYAWAFVGLXXXXXXXXXXXX 120
           GQIG+D PNFLSQ SQDN PSVLFAMAGGVVLS+GNLSTQYAWAFVGL            
Sbjct: 61  GQIGTDHPNFLSQLSQDNLPSVLFAMAGGVVLSIGNLSTQYAWAFVGLSVVEVITSSITV 120

Query: 121 XXXXXLNYFLDDKINKAEILFPGVGCFLIAVCLGSAVHSSNTADNKAKLENFSNDYKDAA 180
                LNYFLDDKINKAEILFPGVGCFL+AVCLGSAVHSSNTADN+AKL   S+ +KD  
Sbjct: 121 VIGTTLNYFLDDKINKAEILFPGVGCFLVAVCLGSAVHSSNTADNQAKL---SSHHKDVV 177

Query: 181 QGINLSTLKETSEADSKDPEKGNDSAYKAKKGTAVFLIELEKRRSIKVFGKSTLMGLAIT 240
           QG NLSTL E S+ DSKD E G  +A KAK GTAVFLIELEK+RSIKVFGKST +GLAIT
Sbjct: 178 QGTNLSTLNEESKDDSKDLENG--TANKAKAGTAVFLIELEKKRSIKVFGKSTFIGLAIT 235

Query: 241 FFAGFCFSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFLYHP 300
           FFAG CFSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFLYHP
Sbjct: 236 FFAGVCFSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFLYHP 295

Query: 301 VLNLPKSSLKAYLRDWNGRGWALLAGLLCGFGNGLXXXXXXXXXXXXXXXXXXLPLVSTF 360
           VLNLPKSSLKAYL DWNGRGWALLAGLLCGFGNGL                  LPLVSTF
Sbjct: 296 VLNLPKSSLKAYLGDWNGRGWALLAGLLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTF 355

Query: 361 WGVVLFGEYRKSSKRTYMLLGSMLLMFIAAVAILMASSGHRK 402
           WGV+LFGEYRKSS+RTY LLGSMLLMFIAAVA+LMASSGHRK
Sbjct: 356 WGVILFGEYRKSSRRTYTLLGSMLLMFIAAVAVLMASSGHRK 397


>Medtr5g045530.1 | ureide permease-like protein | HC |
           chr5:19977567-19985083 | 20130731
          Length = 403

 Score =  631 bits (1628), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/403 (78%), Positives = 335/403 (83%), Gaps = 3/403 (0%)

Query: 1   MYMVESKGGAIVCMLLSLLFLGTWPAVMTLLERRGRLPQHTYLDYTLTNLLAAVIIAFTF 60
           MY+VESKGGAIVCML SL FLGTWPAVM LLERRGRLPQHTYLDYT+ N LAAVIIAFTF
Sbjct: 1   MYLVESKGGAIVCMLFSLFFLGTWPAVMNLLERRGRLPQHTYLDYTIANFLAAVIIAFTF 60

Query: 61  GQIGSDQPNFLSQFSQDNFPSVLFAMAGGVVLSVGNLSTQYAWAFVGLXXXXXXXXXXXX 120
           GQIG+D PNFLSQ SQDN PSVLFAMAGGVVLS+GN+S QY WAFVGL            
Sbjct: 61  GQIGTDDPNFLSQLSQDNLPSVLFAMAGGVVLSIGNVSGQYVWAFVGLSVAGVITSSIIV 120

Query: 121 XXXXXLNYFLDDKINKAEILFPGVGCFLIAVCLGSAVHSSNTADNKAKLENFSNDYKDAA 180
                LNYFLDDKINKAEILFPGVGCF +AVCLG  +HSSN ADN+AKL++F+N  KD A
Sbjct: 121 IIGTVLNYFLDDKINKAEILFPGVGCFFVAVCLGYFLHSSNIADNQAKLKDFAN--KDVA 178

Query: 181 QGINLSTLKETS-EADSKDPEKGNDSAYKAKKGTAVFLIELEKRRSIKVFGKSTLMGLAI 239
           QG +LSTLKE S E DSKD E G+D   K K GTAVFLIELEKRRSIKVF KST +GLAI
Sbjct: 179 QGTSLSTLKEASHEVDSKDLENGSDPTCKVKVGTAVFLIELEKRRSIKVFEKSTFIGLAI 238

Query: 240 TFFAGFCFSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFLYH 299
           TFFAG  FSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIIL+ITFLYH
Sbjct: 239 TFFAGISFSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILSITFLYH 298

Query: 300 PVLNLPKSSLKAYLRDWNGRGWALLAGLLCGFGNGLXXXXXXXXXXXXXXXXXXLPLVST 359
           P+LNLPKSSLKAYL DWNGRGWALLAGLLCGFGNGL                  LPLVST
Sbjct: 299 PILNLPKSSLKAYLGDWNGRGWALLAGLLCGFGNGLQFMGGQAAGYAAADAVQALPLVST 358

Query: 360 FWGVVLFGEYRKSSKRTYMLLGSMLLMFIAAVAILMASSGHRK 402
           FWGVVLFGEYRKSS+RTY+LLGSMLLMFIAAVA+LMASSGHRK
Sbjct: 359 FWGVVLFGEYRKSSRRTYILLGSMLLMFIAAVAVLMASSGHRK 401


>Medtr5g045520.2 | ureide permease-like protein | HC |
           chr5:19975925-19972565 | 20130731
          Length = 402

 Score =  592 bits (1527), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/405 (72%), Positives = 325/405 (80%), Gaps = 7/405 (1%)

Query: 1   MYMVESKGGAIVCMLLSLLFLGTWPAVMTLLERRGRLPQHTYLDYTLTNLLAAVIIAFTF 60
           MY+VESKGGAI CMLL+L FLGTWPAV+TLLERRGRLPQHTYLDY++TN LAA+IIAFTF
Sbjct: 1   MYLVESKGGAIGCMLLALFFLGTWPAVLTLLERRGRLPQHTYLDYSITNFLAAIIIAFTF 60

Query: 61  GQIGS---DQPNFLSQFSQDNFPSVLFAMAGGVVLSVGNLSTQYAWAFVGLXXXXXXXXX 117
           GQIG+   D PNFL+Q +QDN+PSV+FAMAGGVVLS+GNLSTQYA+A VGL         
Sbjct: 61  GQIGNGTVDAPNFLTQLAQDNWPSVMFAMAGGVVLSLGNLSTQYAFALVGLSVTEVITAS 120

Query: 118 XXXXXXXXLNYFLDDKINKAEILFPGVGCFLIAVCLGSAVHSSNTADNKAKLENFSNDYK 177
                   LNYFLDDKINKAEILFPGVGCFL+AVCLGSAVH+SNTADN+AKL++FS+ + 
Sbjct: 121 ITVVIGTTLNYFLDDKINKAEILFPGVGCFLVAVCLGSAVHASNTADNQAKLKDFSSHHN 180

Query: 178 DAAQGINLSTLKETSEADSKDPEKGNDSAYKAKKGTAVFLIELEKRRSIKVFGKSTLMGL 237
           D    + L +LKE +   SKD E G  SA K K GTAVFLIE E RR+IKVFGK  L+GL
Sbjct: 181 D----VTLDSLKEGNIVKSKDLESGGSSAEKLKAGTAVFLIENENRRAIKVFGKRPLIGL 236

Query: 238 AITFFAGFCFSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFL 297
            I FFAG CFSLFSPAFNLATNDQWH+LKKGVPHL+VYTAFFYFSVSCFV+ IILNI FL
Sbjct: 237 TIVFFAGICFSLFSPAFNLATNDQWHSLKKGVPHLNVYTAFFYFSVSCFVIGIILNIIFL 296

Query: 298 YHPVLNLPKSSLKAYLRDWNGRGWALLAGLLCGFGNGLXXXXXXXXXXXXXXXXXXLPLV 357
           YHPVLNLPKSSL  YL DWNGRGWALLAG LCGFGNGL                  LPLV
Sbjct: 297 YHPVLNLPKSSLTNYLGDWNGRGWALLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLV 356

Query: 358 STFWGVVLFGEYRKSSKRTYMLLGSMLLMFIAAVAILMASSGHRK 402
           STFWG++LFGEYRKSS RTY+LLGSML MFI AV +LMASSGHRK
Sbjct: 357 STFWGIILFGEYRKSSGRTYILLGSMLFMFIVAVGVLMASSGHRK 401


>Medtr5g045520.1 | ureide permease-like protein | HC |
           chr5:19976072-19972565 | 20130731
          Length = 402

 Score =  592 bits (1527), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/405 (72%), Positives = 325/405 (80%), Gaps = 7/405 (1%)

Query: 1   MYMVESKGGAIVCMLLSLLFLGTWPAVMTLLERRGRLPQHTYLDYTLTNLLAAVIIAFTF 60
           MY+VESKGGAI CMLL+L FLGTWPAV+TLLERRGRLPQHTYLDY++TN LAA+IIAFTF
Sbjct: 1   MYLVESKGGAIGCMLLALFFLGTWPAVLTLLERRGRLPQHTYLDYSITNFLAAIIIAFTF 60

Query: 61  GQIGS---DQPNFLSQFSQDNFPSVLFAMAGGVVLSVGNLSTQYAWAFVGLXXXXXXXXX 117
           GQIG+   D PNFL+Q +QDN+PSV+FAMAGGVVLS+GNLSTQYA+A VGL         
Sbjct: 61  GQIGNGTVDAPNFLTQLAQDNWPSVMFAMAGGVVLSLGNLSTQYAFALVGLSVTEVITAS 120

Query: 118 XXXXXXXXLNYFLDDKINKAEILFPGVGCFLIAVCLGSAVHSSNTADNKAKLENFSNDYK 177
                   LNYFLDDKINKAEILFPGVGCFL+AVCLGSAVH+SNTADN+AKL++FS+ + 
Sbjct: 121 ITVVIGTTLNYFLDDKINKAEILFPGVGCFLVAVCLGSAVHASNTADNQAKLKDFSSHHN 180

Query: 178 DAAQGINLSTLKETSEADSKDPEKGNDSAYKAKKGTAVFLIELEKRRSIKVFGKSTLMGL 237
           D    + L +LKE +   SKD E G  SA K K GTAVFLIE E RR+IKVFGK  L+GL
Sbjct: 181 D----VTLDSLKEGNIVKSKDLESGGSSAEKLKAGTAVFLIENENRRAIKVFGKRPLIGL 236

Query: 238 AITFFAGFCFSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFL 297
            I FFAG CFSLFSPAFNLATNDQWH+LKKGVPHL+VYTAFFYFSVSCFV+ IILNI FL
Sbjct: 237 TIVFFAGICFSLFSPAFNLATNDQWHSLKKGVPHLNVYTAFFYFSVSCFVIGIILNIIFL 296

Query: 298 YHPVLNLPKSSLKAYLRDWNGRGWALLAGLLCGFGNGLXXXXXXXXXXXXXXXXXXLPLV 357
           YHPVLNLPKSSL  YL DWNGRGWALLAG LCGFGNGL                  LPLV
Sbjct: 297 YHPVLNLPKSSLTNYLGDWNGRGWALLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLV 356

Query: 358 STFWGVVLFGEYRKSSKRTYMLLGSMLLMFIAAVAILMASSGHRK 402
           STFWG++LFGEYRKSS RTY+LLGSML MFI AV +LMASSGHRK
Sbjct: 357 STFWGIILFGEYRKSSGRTYILLGSMLFMFIVAVGVLMASSGHRK 401


>Medtr5g045520.3 | ureide permease-like protein | HC |
           chr5:19975925-19972565 | 20130731
          Length = 428

 Score =  592 bits (1526), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 293/405 (72%), Positives = 325/405 (80%), Gaps = 7/405 (1%)

Query: 1   MYMVESKGGAIVCMLLSLLFLGTWPAVMTLLERRGRLPQHTYLDYTLTNLLAAVIIAFTF 60
           MY+VESKGGAI CMLL+L FLGTWPAV+TLLERRGRLPQHTYLDY++TN LAA+IIAFTF
Sbjct: 27  MYLVESKGGAIGCMLLALFFLGTWPAVLTLLERRGRLPQHTYLDYSITNFLAAIIIAFTF 86

Query: 61  GQIGS---DQPNFLSQFSQDNFPSVLFAMAGGVVLSVGNLSTQYAWAFVGLXXXXXXXXX 117
           GQIG+   D PNFL+Q +QDN+PSV+FAMAGGVVLS+GNLSTQYA+A VGL         
Sbjct: 87  GQIGNGTVDAPNFLTQLAQDNWPSVMFAMAGGVVLSLGNLSTQYAFALVGLSVTEVITAS 146

Query: 118 XXXXXXXXLNYFLDDKINKAEILFPGVGCFLIAVCLGSAVHSSNTADNKAKLENFSNDYK 177
                   LNYFLDDKINKAEILFPGVGCFL+AVCLGSAVH+SNTADN+AKL++FS+ + 
Sbjct: 147 ITVVIGTTLNYFLDDKINKAEILFPGVGCFLVAVCLGSAVHASNTADNQAKLKDFSSHHN 206

Query: 178 DAAQGINLSTLKETSEADSKDPEKGNDSAYKAKKGTAVFLIELEKRRSIKVFGKSTLMGL 237
           D    + L +LKE +   SKD E G  SA K K GTAVFLIE E RR+IKVFGK  L+GL
Sbjct: 207 D----VTLDSLKEGNIVKSKDLESGGSSAEKLKAGTAVFLIENENRRAIKVFGKRPLIGL 262

Query: 238 AITFFAGFCFSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFL 297
            I FFAG CFSLFSPAFNLATNDQWH+LKKGVPHL+VYTAFFYFSVSCFV+ IILNI FL
Sbjct: 263 TIVFFAGICFSLFSPAFNLATNDQWHSLKKGVPHLNVYTAFFYFSVSCFVIGIILNIIFL 322

Query: 298 YHPVLNLPKSSLKAYLRDWNGRGWALLAGLLCGFGNGLXXXXXXXXXXXXXXXXXXLPLV 357
           YHPVLNLPKSSL  YL DWNGRGWALLAG LCGFGNGL                  LPLV
Sbjct: 323 YHPVLNLPKSSLTNYLGDWNGRGWALLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLV 382

Query: 358 STFWGVVLFGEYRKSSKRTYMLLGSMLLMFIAAVAILMASSGHRK 402
           STFWG++LFGEYRKSS RTY+LLGSML MFI AV +LMASSGHRK
Sbjct: 383 STFWGIILFGEYRKSSGRTYILLGSMLFMFIVAVGVLMASSGHRK 427


>Medtr5g044710.2 | ureide permease-like protein | HC |
           chr5:19621718-19623761 | 20130731
          Length = 323

 Score =  513 bits (1321), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 259/327 (79%), Positives = 271/327 (82%), Gaps = 5/327 (1%)

Query: 76  QDNFPSVLFAMAGGVVLSVGNLSTQYAWAFVGLXXXXXXXXXXXXXXXXXLNYFLDDKIN 135
           QDN PSVLFAMAGGVVLS+GNLSTQYAWAFVGL                 LNYFLDDKIN
Sbjct: 2   QDNLPSVLFAMAGGVVLSIGNLSTQYAWAFVGLSVVEVITSSITVVIGTTLNYFLDDKIN 61

Query: 136 KAEILFPGVGCFLIAVCLGSAVHSSNTADNKAKLENFSNDYKDAAQGINLSTLKETSEAD 195
           KAEILFPGVGCFL+AVCLGSAVHSSNTADN+AKL   S+ +KD  QG NLSTL E S+ D
Sbjct: 62  KAEILFPGVGCFLVAVCLGSAVHSSNTADNQAKL---SSHHKDVVQGTNLSTLNEESKDD 118

Query: 196 SKDPEKGNDSAYKAKKGTAVFLIELEKRRSIKVFGKSTLMGLAITFFAGFCFSLFSPAFN 255
           SKD E G  +A KAK GTAVFLIELEK+RSIKVFGKST +GLAITFFAG CFSLFSPAFN
Sbjct: 119 SKDLENG--TANKAKAGTAVFLIELEKKRSIKVFGKSTFIGLAITFFAGVCFSLFSPAFN 176

Query: 256 LATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFLYHPVLNLPKSSLKAYLRD 315
           LATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFLYHPVLNLPKSSLKAYL D
Sbjct: 177 LATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFLYHPVLNLPKSSLKAYLGD 236

Query: 316 WNGRGWALLAGLLCGFGNGLXXXXXXXXXXXXXXXXXXLPLVSTFWGVVLFGEYRKSSKR 375
           WNGRGWALLAGLLCGFGNGL                  LPLVSTFWGV+LFGEYRKSS+R
Sbjct: 237 WNGRGWALLAGLLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGVILFGEYRKSSRR 296

Query: 376 TYMLLGSMLLMFIAAVAILMASSGHRK 402
           TY LLGSMLLMFIAAVA+LMASSGHRK
Sbjct: 297 TYTLLGSMLLMFIAAVAVLMASSGHRK 323