Miyakogusa Predicted Gene

Lj2g3v1204560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1204560.1 tr|B6TNU9|B6TNU9_MAIZE BSD domain containing
protein OS=Zea mays PE=2 SV=1,35.86,1e-18,BSD,BSD; domain in
transcription factors and synapse-,BSD; seg,NULL,CUFF.36510.1
         (286 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g08580.1                                                       320   1e-87
Glyma02g13590.1                                                       318   4e-87
Glyma05g07470.1                                                       154   9e-38
Glyma17g08960.1                                                       134   1e-31
Glyma11g04960.1                                                        54   2e-07
Glyma01g40330.1                                                        53   3e-07
Glyma04g04990.1                                                        51   1e-06
Glyma06g05060.1                                                        51   1e-06

>Glyma01g08580.1 
          Length = 299

 Score =  320 bits (820), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 179/300 (59%), Positives = 195/300 (65%), Gaps = 15/300 (5%)

Query: 1   MEDFWKRAKTFAEEAAKKSQA-------------ETAKKSKDFAAEASKHADIIKTAALR 47
           MED WKRAKTFAEEAAKKSQ+             ETAKKSK+ AAEASK ADI+K+AALR
Sbjct: 1   MEDLWKRAKTFAEEAAKKSQSLTPSSSRIADLVSETAKKSKELAAEASKKADILKSAALR 60

Query: 48  QADQIKSFSDTXXXXXXXXXXXXXXXXXXXXXXXVSEEDLEKFGVTDDLRSFVKGXXXXX 107
           QADQIKSFSDT                        + ++LEKFGVTDDLRSFVKG     
Sbjct: 61  QADQIKSFSDTIAIPPQFAAIASAATSAATSPPSATPQELEKFGVTDDLRSFVKGLTSTT 120

Query: 108 XXXXXXXXDESEGSNVPTSGSNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPRAMKER 167
                   DESEGS+V T GSNVRKDLNEFQEKHATLVLTTVKEIS+LRYELCPRAMKER
Sbjct: 121 FQNFPLSSDESEGSDVTTVGSNVRKDLNEFQEKHATLVLTTVKEISRLRYELCPRAMKER 180

Query: 168 HFWKIYFILVNTHVAPYEKRYMEEVQLREAAKQNVDTEVEQTAVSGGSGKAEATG-XXXX 226
           HFWKIYF LVNTHVAPYEK+YM+EVQLR AA+QNVD + EQ AV+GG+GKAEA G     
Sbjct: 181 HFWKIYFTLVNTHVAPYEKQYMQEVQLRAAAEQNVDPKEEQPAVTGGTGKAEAIGGNVKS 240

Query: 227 XXXXXXXXEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIGNSDVEDEKHVKKTSSATV 286
                   EQ                             KIGNSDVEDEKHVKKT +ATV
Sbjct: 241 RPSNSSSTEQDLDTFLLGDLEDSDEAPDDGEGSFDDDFDKIGNSDVEDEKHVKKT-AATV 299


>Glyma02g13590.1 
          Length = 304

 Score =  318 bits (815), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 182/305 (59%), Positives = 196/305 (64%), Gaps = 20/305 (6%)

Query: 1   MEDFWKRAKTFAEEAAKKSQA-------------ETAKKSKDFAAEASKHADIIKTAALR 47
           MED WKRAKTFAEEAAKKSQ+             ETAKKSK+ AAEASK ADI+K+AALR
Sbjct: 1   MEDLWKRAKTFAEEAAKKSQSLTPSSSRIADLVSETAKKSKELAAEASKKADILKSAALR 60

Query: 48  QADQIKSFSDTXXXXXX-----XXXXXXXXXXXXXXXXXVSEEDLEKFGVTDDLRSFVKG 102
           QADQIKSFSDT                             + ++LEKFGVTDDLRSFVKG
Sbjct: 61  QADQIKSFSDTIAIPPQFAAIASAATTAATAATATAPPSATPQELEKFGVTDDLRSFVKG 120

Query: 103 XXXXXXXXXXXXXDESEGSNVPTSGSNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPR 162
                        DESE S+V T GSNVRKDLNEFQEKHATLVLTTVKEIS+LRYELCPR
Sbjct: 121 LTSTTFQNFPLSSDESEVSDVTTVGSNVRKDLNEFQEKHATLVLTTVKEISRLRYELCPR 180

Query: 163 AMKERHFWKIYFILVNTHVAPYEKRYMEEVQLREAAKQNVDTEVEQTAVSGGSGKAEATG 222
           AMKERHFWKIYF LVNTHVAPYEK YMEEVQLR AA+QNVDT+VEQ AV+GG+GKAEATG
Sbjct: 181 AMKERHFWKIYFTLVNTHVAPYEKEYMEEVQLRAAAEQNVDTKVEQPAVTGGTGKAEATG 240

Query: 223 XXXX-XXXXXXXXEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIGNSDVEDEKHVKKT 281
                        EQ                             KIGNSDVEDEKHVKKT
Sbjct: 241 NNLKGRPSNSSSTEQDLDTFLLGDLEDSDEAPDDGEGSFDDDFDKIGNSDVEDEKHVKKT 300

Query: 282 SSATV 286
            +ATV
Sbjct: 301 -AATV 304


>Glyma05g07470.1 
          Length = 248

 Score =  154 bits (390), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 87/205 (42%), Positives = 116/205 (56%), Gaps = 52/205 (25%)

Query: 3   DFWKRAKTFAEEAAKKSQAET------------AKKSKDFAAEASKHADIIKTAALRQAD 50
           + W RA++FAEEAAK+SQ  +            A+ +K+ AA+ASKH             
Sbjct: 2   ELWNRARSFAEEAAKRSQELSLGARATQFTNIIAETTKEIAAQASKHL------------ 49

Query: 51  QIKSFSDTXXXXXXXXXXXXXXXXXXXXXXXVSEEDLEKFGVTDDLRSFVKGXXXXXXXX 110
                                          +++ DL +FG+T++LR FVKG        
Sbjct: 50  --------------------------PRPYAINDVDLHRFGITEELRDFVKGITITTFED 83

Query: 111 XXXXXDESEGSNVPTSGSNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPRAMKERHFW 170
                D++E S+VP + SNVR+DL E+QEKHA+LVL+TVKEIS LRYELCPR MKER FW
Sbjct: 84  FPLQ-DDTELSDVP-AVSNVRQDLTEWQEKHASLVLSTVKEISGLRYELCPRVMKERKFW 141

Query: 171 KIYFILVNTHVAPYEKRYMEEVQLR 195
           +IYFILVN H APYE +YME+ +L+
Sbjct: 142 RIYFILVNNHTAPYENKYMEDNKLK 166


>Glyma17g08960.1 
          Length = 259

 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 113/213 (53%), Gaps = 56/213 (26%)

Query: 3   DFWKRAKTFAEEAAKKSQAE-----TAKKSKDFAAEASKHADIIKTAALRQADQIKSFSD 57
           + W RA+ FAEEAAK+SQA       A+ +K+ AA+AS++        L Q   I     
Sbjct: 2   ELWNRARGFAEEAAKRSQATKFTEIIAETTKEIAAQASRY--------LPQPSIINGVY- 52

Query: 58  TXXXXXXXXXXXXXXXXXXXXXXXVSEEDLEKFGVTDDLRSFVKGXXXXXXXXXXXXXDE 117
                                        L +FG+T +LR FV+G             D+
Sbjct: 53  -----------------------------LHRFGITQELREFVEGITITTFEDFPLQ-DD 82

Query: 118 SEGSNVPTSGSNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILV 177
           +E S+VP + SNVR+DL E+QEKHA LVL+TVKEIS+LRYE CP+ MKER FW+IYFILV
Sbjct: 83  TELSDVP-AVSNVRQDLTEWQEKHARLVLSTVKEISRLRYEPCPQVMKERKFWRIYFILV 141

Query: 178 NTHVAPY-----------EKRYMEEVQLREAAK 199
           N H+AP            E +YME  +L+ + +
Sbjct: 142 NNHIAPLYCYSHMISDSNENKYMEGDKLKSSIQ 174


>Glyma11g04960.1 
          Length = 475

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query: 138 QEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAPYEKRYMEEVQLREA 197
           Q++HA  V      ++ LR ELCP  M + +FWKIYF+LV+  ++  +   +   Q+ EA
Sbjct: 193 QQEHALAVEHLAPSLAALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILSTPQIMEA 252


>Glyma01g40330.1 
          Length = 466

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query: 138 QEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAPYEKRYMEEVQLREA 197
           Q++HA  V      ++ LR ELCP  M + +FWKIYF+LV+  ++  +   +   Q+ EA
Sbjct: 188 QQEHALAVEHLAPSLAALRMELCPGYMSDGNFWKIYFVLVHPRLSKTDAAILSTPQIMEA 247


>Glyma04g04990.1 
          Length = 393

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 30/44 (68%)

Query: 138 QEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHV 181
           Q++HA +V      ++ LR ELCP  M E +FWK+YF+L+++ +
Sbjct: 191 QQEHAAVVERLTPRLAALRIELCPCHMSESYFWKVYFVLLHSRL 234


>Glyma06g05060.1 
          Length = 418

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 30/44 (68%)

Query: 138 QEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHV 181
           Q++HA +V      ++ LR ELCP  M E +FWK+YF+L+++ +
Sbjct: 191 QQEHAAVVERLTPRLAALRIELCPCHMSESYFWKVYFVLLHSRL 234