Miyakogusa Predicted Gene

Lj2g3v1204560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1204560.1 tr|B6TNU9|B6TNU9_MAIZE BSD domain containing
protein OS=Zea mays PE=2 SV=1,35.86,1e-18,BSD,BSD; domain in
transcription factors and synapse-,BSD; seg,NULL,CUFF.36510.1
         (286 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g048180.1 | BSD domain protein | HC | chr5:21092676-210979...   292   3e-79
Medtr5g048180.3 | BSD domain protein | HC | chr5:21092681-210964...   275   3e-74
Medtr5g048180.2 | BSD domain protein | HC | chr5:21092681-210979...   274   7e-74
Medtr4g110020.1 | BSD domain protein | HC | chr4:45789702-457956...   144   8e-35
Medtr4g020080.1 | BSD domain protein | HC | chr4:6432579-6429647...    94   1e-19
Medtr4g020080.2 | BSD domain protein | HC | chr4:6432579-6429855...    84   2e-16
Medtr3g103310.1 | BSD domain protein | HC | chr3:47650656-476551...    51   1e-06
Medtr5g015180.1 | BSD domain protein | HC | chr5:5224601-5221926...    50   2e-06

>Medtr5g048180.1 | BSD domain protein | HC | chr5:21092676-21097933
           | 20130731
          Length = 296

 Score =  292 bits (747), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 173/303 (57%), Positives = 190/303 (62%), Gaps = 24/303 (7%)

Query: 1   MEDFWKRAKTFAEEAAKKSQA---------------ETAKKSKDFAAEASKHADIIKTAA 45
           MEDFWKRAKTFAEEAAKKSQ+               ETAKKSK+ AAEASK AD IK+AA
Sbjct: 1   MEDFWKRAKTFAEEAAKKSQSLTTSSATSRIADLVSETAKKSKELAAEASKKADEIKSAA 60

Query: 46  LRQADQIKSFSDTXXXXXXXXXXXXXXXXXXXXXXXVSEEDLEKFGVTDDLRSFVKGXXX 105
           LRQADQIKSFSD                           E+LE+FG+TDDLRSFV+G   
Sbjct: 61  LRQADQIKSFSDNISIPPQFSAIAAAATSSTVAPPV---ENLERFGITDDLRSFVQGLTS 117

Query: 106 XXXXXXXXXXDESE--GSNVPTSGSNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPRA 163
                     DESE  GS+V TS  NVRKDLNEFQEKHATLVLTTVKEIS+LRYELCPRA
Sbjct: 118 TTFKHFPVNSDESESEGSDVATS--NVRKDLNEFQEKHATLVLTTVKEISRLRYELCPRA 175

Query: 164 MKERHFWKIYFILVNTHVAPYEKRYMEEVQLREAAKQNVDTEVEQTAVSGGSGKAEATGX 223
           MKERHFWKIYF LVNTHVAP+EK+YMEE  LREAAK++ D +VEQ+ VSGGSGKAE TG 
Sbjct: 176 MKERHFWKIYFTLVNTHVAPFEKQYMEE--LREAAKKSEDAKVEQSDVSGGSGKAEVTGK 233

Query: 224 XXXXXXXXXXXEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIGNSDVEDEKHVKKTSS 283
                      EQ                             KI +SDVEDEKH KKTS+
Sbjct: 234 IVSKSSNSSSTEQDLDTFLLGDLEDSDEAPDDGEGSFDDDFDKIESSDVEDEKHAKKTSA 293

Query: 284 ATV 286
           ATV
Sbjct: 294 ATV 296


>Medtr5g048180.3 | BSD domain protein | HC | chr5:21092681-21096453
           | 20130731
          Length = 286

 Score =  275 bits (703), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 154/239 (64%), Positives = 169/239 (70%), Gaps = 24/239 (10%)

Query: 1   MEDFWKRAKTFAEEAAKKSQA---------------ETAKKSKDFAAEASKHADIIKTAA 45
           MEDFWKRAKTFAEEAAKKSQ+               ETAKKSK+ AAEASK AD IK+AA
Sbjct: 1   MEDFWKRAKTFAEEAAKKSQSLTTSSATSRIADLVSETAKKSKELAAEASKKADEIKSAA 60

Query: 46  LRQADQIKSFSDTXXXXXXXXXXXXXXXXXXXXXXXVSEEDLEKFGVTDDLRSFVKGXXX 105
           LRQADQIKSFSD                           E+LE+FG+TDDLRSFV+G   
Sbjct: 61  LRQADQIKSFSDNISIPPQFSAIAAAATSSTVAPPV---ENLERFGITDDLRSFVQGLTS 117

Query: 106 XXXXXXXXXXDESE--GSNVPTSGSNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPRA 163
                     DESE  GS+V TS  NVRKDLNEFQEKHATLVLTTVKEIS+LRYELCPRA
Sbjct: 118 TTFKHFPVNSDESESEGSDVATS--NVRKDLNEFQEKHATLVLTTVKEISRLRYELCPRA 175

Query: 164 MKERHFWKIYFILVNTHVAPYEKRYMEEVQLREAAKQNVDTEVEQTAVSGGSGKAEATG 222
           MKERHFWKIYF LVNTHVAP+EK+YMEE  LREAAK++ D +VEQ+ VSGGSGKAE TG
Sbjct: 176 MKERHFWKIYFTLVNTHVAPFEKQYMEE--LREAAKKSEDAKVEQSDVSGGSGKAEVTG 232


>Medtr5g048180.2 | BSD domain protein | HC | chr5:21092681-21097913
           | 20130731
          Length = 302

 Score =  274 bits (700), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 154/239 (64%), Positives = 169/239 (70%), Gaps = 24/239 (10%)

Query: 1   MEDFWKRAKTFAEEAAKKSQA---------------ETAKKSKDFAAEASKHADIIKTAA 45
           MEDFWKRAKTFAEEAAKKSQ+               ETAKKSK+ AAEASK AD IK+AA
Sbjct: 1   MEDFWKRAKTFAEEAAKKSQSLTTSSATSRIADLVSETAKKSKELAAEASKKADEIKSAA 60

Query: 46  LRQADQIKSFSDTXXXXXXXXXXXXXXXXXXXXXXXVSEEDLEKFGVTDDLRSFVKGXXX 105
           LRQADQIKSFSD                           E+LE+FG+TDDLRSFV+G   
Sbjct: 61  LRQADQIKSFSDNISIPPQFSAIAAAATSSTVAPPV---ENLERFGITDDLRSFVQGLTS 117

Query: 106 XXXXXXXXXXDESE--GSNVPTSGSNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPRA 163
                     DESE  GS+V TS  NVRKDLNEFQEKHATLVLTTVKEIS+LRYELCPRA
Sbjct: 118 TTFKHFPVNSDESESEGSDVATS--NVRKDLNEFQEKHATLVLTTVKEISRLRYELCPRA 175

Query: 164 MKERHFWKIYFILVNTHVAPYEKRYMEEVQLREAAKQNVDTEVEQTAVSGGSGKAEATG 222
           MKERHFWKIYF LVNTHVAP+EK+YMEE  LREAAK++ D +VEQ+ VSGGSGKAE TG
Sbjct: 176 MKERHFWKIYFTLVNTHVAPFEKQYMEE--LREAAKKSEDAKVEQSDVSGGSGKAEVTG 232


>Medtr4g110020.1 | BSD domain protein | HC | chr4:45789702-45795625
           | 20130731
          Length = 228

 Score =  144 bits (364), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 114/197 (57%), Gaps = 30/197 (15%)

Query: 3   DFWKRAKTFAEEAAKKSQAET--AKKSKDFAAEASKHADIIKTAALRQADQIKSFSDTXX 60
           + WK+ ++FAEE AK+SQ  +  A K     AE +K   I+  A++   +   SF++   
Sbjct: 2   ELWKKGRSFAEETAKRSQDLSFGAHKFTKIIAENAK--GIVAQASIHLVE--PSFNNDVD 57

Query: 61  XXXXXXXXXXXXXXXXXXXXXVSEEDLEKFGVTDDLRSFVKGXXXXXXXXXXXXXDESEG 120
                                    + E FG+TD+LR FVKG             D++E 
Sbjct: 58  I----------------------NPNFESFGITDELRDFVKGITVTTFRDFPLQ-DDTEL 94

Query: 121 SNVPTSGSNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTH 180
            +VP + SN+R+DL E+QEKHA LVL+TVKEISKLRYELCP  MKER FW+IYFILVN H
Sbjct: 95  FDVP-AVSNIRQDLTEWQEKHANLVLSTVKEISKLRYELCPHVMKERKFWRIYFILVNNH 153

Query: 181 VAPYEKRYMEEVQLREA 197
           +APYE  YM++ +L+ +
Sbjct: 154 IAPYENWYMQDAKLKSS 170


>Medtr4g020080.1 | BSD domain protein | HC | chr4:6432579-6429647 |
           20130731
          Length = 170

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 58/74 (78%)

Query: 128 SNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAPYEKR 187
           + VRKDL+++QE+HA L+L+ VKEIS+LRY LCPR +KE  FW IYF L  +H+APYE R
Sbjct: 68  TRVRKDLSQWQERHAVLILSNVKEISQLRYVLCPRHLKENQFWIIYFTLARSHLAPYELR 127

Query: 188 YMEEVQLREAAKQN 201
            +++ +L++ A ++
Sbjct: 128 AIQQEKLKQMAMED 141


>Medtr4g020080.2 | BSD domain protein | HC | chr4:6432579-6429855 |
           20130731
          Length = 125

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 45/56 (80%)

Query: 128 SNVRKDLNEFQEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAP 183
           + VRKDL+++QE+HA L+L+ VKEIS+LRY LCPR +KE  FW IYF L  +H+AP
Sbjct: 68  TRVRKDLSQWQERHAVLILSNVKEISQLRYVLCPRHLKENQFWIIYFTLARSHLAP 123


>Medtr3g103310.1 | BSD domain protein | HC | chr3:47650656-47655164
           | 20130731
          Length = 418

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 31/48 (64%)

Query: 134 LNEFQEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHV 181
           ++E Q  HA +V      ++ LR ELCP  M E +FWK+YF+L+++ +
Sbjct: 189 MSEDQRDHAMVVERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRL 236


>Medtr5g015180.1 | BSD domain protein | HC | chr5:5224601-5221926 |
           20130731
          Length = 481

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 138 QEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAPYEKRYMEEVQLREA 197
           Q++HA  V      ++ LR ELCP  M +  FWKIYF+L++  ++  +   +   Q+ EA
Sbjct: 199 QQEHALAVEHLAPRLAALRMELCPGYMSDGCFWKIYFVLLHPKLSKNDAVILSTPQIMEA 258