Miyakogusa Predicted Gene

Lj2g3v1204560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1204560.1 tr|B6TNU9|B6TNU9_MAIZE BSD domain containing
protein OS=Zea mays PE=2 SV=1,35.86,1e-18,BSD,BSD; domain in
transcription factors and synapse-,BSD; seg,NULL,CUFF.36510.1
         (286 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69030.1 | Symbols:  | BSD domain-containing protein | chr1:2...   196   2e-50
AT1G26300.1 | Symbols:  | BSD domain-containing protein | chr1:9...   193   1e-49
AT1G26300.2 | Symbols:  | BSD domain-containing protein | chr1:9...   176   2e-44
AT3G24820.1 | Symbols:  | BSD domain-containing protein | chr3:9...    95   6e-20
AT5G65910.1 | Symbols:  | BSD domain-containing protein | chr5:2...    50   2e-06

>AT1G69030.1 | Symbols:  | BSD domain-containing protein |
           chr1:25947429-25949262 REVERSE LENGTH=317
          Length = 317

 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/265 (45%), Positives = 146/265 (55%), Gaps = 58/265 (21%)

Query: 1   MEDFWKRAKTFAEEAAKKSQ---------------------------------------- 20
           MED WKRAK+FAEEAAKKSQ                                        
Sbjct: 1   MEDLWKRAKSFAEEAAKKSQTITLQSSSTTFVNLVTETAKKSKEFALEASKKADSINVSE 60

Query: 21  --AETAKKSKDFAAEASKHADIIKTAALRQADQ---IKSFSDTXXXXXXXXXXXXXXXXX 75
             AETAKKSK+FAAE S  AD +K  AL+QADQ   IKS +D                  
Sbjct: 61  FVAETAKKSKEFAAEVSTKADQLKVVALKQADQIQNIKSIADIIPGGLGGSGSGGGGSEI 120

Query: 76  XXXXXXVSEEDLEKFGVTDDLRSFVKGXXXXXXXXXXXXXDESEGSNVPTSGSNVRKDLN 135
                  SE +L  FG+TDDLR FVKG             + SE S++ TS SNVRKDL+
Sbjct: 121 -------SESELVSFGITDDLREFVKGLTSATFQAFPEQDESSEVSDLETSASNVRKDLS 173

Query: 136 EFQEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAPYEKRYMEEVQLR 195
           E+QE+HATLVL +VK+ISKLRYELCPR MKER FW+IYF LV+THVAPYE++YMEE++ +
Sbjct: 174 EWQERHATLVLGSVKQISKLRYELCPRVMKERRFWRIYFTLVSTHVAPYERKYMEELRNK 233

Query: 196 EAAKQNVDTEVEQTAVSGGSGKAEA 220
             +K       E+   S G G+ E+
Sbjct: 234 AESKD------EEAKKSPGLGRTES 252


>AT1G26300.1 | Symbols:  | BSD domain-containing protein |
           chr1:9096023-9099746 REVERSE LENGTH=316
          Length = 316

 Score =  193 bits (490), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 162/327 (49%), Gaps = 63/327 (19%)

Query: 1   MEDFWKRAKTFAEEAAKKSQ---------------------------------------- 20
           MED WKRAK+FAEEA KKSQ                                        
Sbjct: 1   MEDLWKRAKSFAEEAGKKSQTITQSSSATFVNLVTETAKKSKELALEASKKADQFNAADF 60

Query: 21  -AETAKKSKDFAAEASKHADIIKTAALRQADQ---IKSFSDTXXXXXXXXXXXXXXXXXX 76
            AETAKKSK+FAAEASK AD  K AAL+QADQ   IKS +D                   
Sbjct: 61  VAETAKKSKEFAAEASKKADQFKVAALKQADQIQNIKSIADI--------------IGTG 106

Query: 77  XXXXXVSEEDLEKFGVTDDLRSFVKGXXXXXXXXXXXXXDESEGSNVPTSGSNVRKDLNE 136
                 SE +L +FGVTDDLR F +G                E S+V T+ SNVRKDL++
Sbjct: 107 TGSGSGSEAELLEFGVTDDLREFAEGLTSATFQAFPDQDQGDEVSDVITNASNVRKDLSD 166

Query: 137 FQEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAPYEKRYMEEVQLRE 196
           +QE+HATLVLT+VK+ISKLRYELCPR MKER FW+IYF LV+THV+PYE++YMEE++ + 
Sbjct: 167 WQERHATLVLTSVKQISKLRYELCPRFMKERRFWRIYFTLVSTHVSPYERKYMEELKTK- 225

Query: 197 AAKQNVDTEVEQTAVSGGSGKAEATGXXXXXXXXXXXXEQXXXXXXXXXXXXXXXXXXXX 256
              ++ + E ++   +G +   E               EQ                    
Sbjct: 226 --GEHGNEEAKKAPATGETETVEKN--VAIRRTSTASSEQDLDTFLLGDLEDSDEAPDDG 281

Query: 257 XXXXXXXXXKIGNSDVEDEKHVKKTSS 283
                    KIGNSDVEDEK   K ++
Sbjct: 282 DGSLEDDFDKIGNSDVEDEKQSSKATT 308


>AT1G26300.2 | Symbols:  | BSD domain-containing protein |
           chr1:9098937-9099746 REVERSE LENGTH=213
          Length = 213

 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/227 (47%), Positives = 125/227 (55%), Gaps = 58/227 (25%)

Query: 1   MEDFWKRAKTFAEEAAKKSQ---------------------------------------- 20
           MED WKRAK+FAEEA KKSQ                                        
Sbjct: 1   MEDLWKRAKSFAEEAGKKSQTITQSSSATFVNLVTETAKKSKELALEASKKADQFNAADF 60

Query: 21  -AETAKKSKDFAAEASKHADIIKTAALRQADQ---IKSFSDTXXXXXXXXXXXXXXXXXX 76
            AETAKKSK+FAAEASK AD  K AAL+QADQ   IKS +D                   
Sbjct: 61  VAETAKKSKEFAAEASKKADQFKVAALKQADQIQNIKSIADIIGTGTGSGSG-------- 112

Query: 77  XXXXXVSEEDLEKFGVTDDLRSFVKGXXXXXXXXXXXXXDESEGSNVPTSGSNVRKDLNE 136
                 SE +L +FGVTDDLR F +G                E S+V T+ SNVRKDL++
Sbjct: 113 ------SEAELLEFGVTDDLREFAEGLTSATFQAFPDQDQGDEVSDVITNASNVRKDLSD 166

Query: 137 FQEKHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAP 183
           +QE+HATLVLT+VK+ISKLRYELCPR MKER FW+IYF LV+THV+P
Sbjct: 167 WQERHATLVLTSVKQISKLRYELCPRFMKERRFWRIYFTLVSTHVSP 213


>AT3G24820.1 | Symbols:  | BSD domain-containing protein |
           chr3:9062717-9064366 REVERSE LENGTH=186
          Length = 186

 Score = 94.7 bits (234), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 8/125 (6%)

Query: 88  EKFGVTDDLRSFVKGXXXXXXXXXXXXXDESEGSNVP--------TSGSNVRKDLNEFQE 139
           E  GVTD+L   V+              +E E S  P        +S +NV+KDL+++QE
Sbjct: 37  EILGVTDELIDHVRSFTIDTFKNFSLEDEEEEVSVNPLGDEDNGMSSSANVKKDLSDWQE 96

Query: 140 KHATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAPYEKRYMEEVQLREAAK 199
           KHA LVL+  KE+S+LR++LCPR +KE  FW+IYF LV   VA YE   +++ Q+R  A 
Sbjct: 97  KHAVLVLSKSKELSQLRFKLCPRVLKEHQFWRIYFQLVRKIVAKYEVLAIQQAQIRRMAM 156

Query: 200 QNVDT 204
           ++  T
Sbjct: 157 EDSKT 161


>AT5G65910.1 | Symbols:  | BSD domain-containing protein |
           chr5:26361592-26363341 REVERSE LENGTH=432
          Length = 432

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 82  VSEEDLEKFGVTDDLRSFVKGXXXXXXXXXXXXXDESEGSNVPTSGSNVRKDLNEFQEKH 141
           V  +D +  GVT++L +FVK               +          S    +L + Q +H
Sbjct: 135 VDPKDYDVIGVTEELVAFVKDLAMHPETWLDFPLPD-------DDDSFDDFELADAQYEH 187

Query: 142 ATLVLTTVKEISKLRYELCPRAMKERHFWKIYFILVNTHVAPYEKRYMEEVQLREA 197
           A  V      ++ LR ELCP  M E  FW+IYF+LV+  ++      +   Q+ EA
Sbjct: 188 ALAVERLAPSLASLRIELCPEYMTENCFWRIYFVLVHPKLSKDHALLLSTPQVLEA 243