Miyakogusa Predicted Gene

Lj2g3v1199960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1199960.1 Non Chatacterized Hit- tr|B9RLD9|B9RLD9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,38.94,0.0000002,seg,NULL,CUFF.36482.1
         (177 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g13920.1                                                       101   4e-22

>Glyma02g13920.1 
          Length = 227

 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 91/184 (49%), Gaps = 29/184 (15%)

Query: 1   MSSNTPFLLRKIRNAWKNLTXXXXXXXXXXXXXX-------------------XXVTRIR 41
           MSS+ PF  + I NAWK++                                    +TR R
Sbjct: 19  MSSDPPFFHKIISNAWKSIAIPTFGYEGNLPLSLPSIAIPTFGYEGNLPLSLPSIITRTR 78

Query: 42  SLAFVLPQNHDSEHLPLY--LNAIEIEKQDYLPRSPFT-IPTKIVSLTFQAALGYQAMST 98
           SL   LPQNH SE LP+Y  +NA E EK DY P+   + +  KIV + F AAL  Q MST
Sbjct: 79  SLTLALPQNHGSEALPMYHFINATETEKLDYNPKKRASNLSAKIVCMIF-AALANQTMST 137

Query: 99  SHYQPSILGASMVIXXXXXXXXLF------IKYSYPRLAAIVEKIGYLSFALSFFLMSQV 152
              QPSILG ++VI        +       IK SY RL AI+E  G LSF L F+LM++ 
Sbjct: 138 PQNQPSILGPAIVIAFVASLFVMLVSKNDTIKPSYLRLVAIMEITGSLSFTLIFWLMTKP 197

Query: 153 FFSG 156
           FFSG
Sbjct: 198 FFSG 201