Miyakogusa Predicted Gene
- Lj2g3v1195240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1195240.1 Non Chatacterized Hit- tr|I1LM27|I1LM27_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.47,0,no
description,DNA-binding pseudobarrel domain; B3,B3 DNA binding domain;
IAA_ARF,Aux/IAA-ARF-dimeri,CUFF.36439.1
(847 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 1041 0.0
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 1001 0.0
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 723 0.0
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 723 0.0
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 498 e-141
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 486 e-137
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 481 e-135
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 481 e-135
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 479 e-135
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 390 e-108
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 390 e-108
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 390 e-108
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 389 e-108
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 374 e-103
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 374 e-103
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 374 e-103
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 374 e-103
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 366 e-101
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 355 7e-98
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 348 1e-95
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 348 1e-95
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 335 7e-92
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 329 5e-90
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 329 5e-90
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 284 2e-76
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 277 2e-74
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 277 2e-74
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 272 9e-73
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 269 8e-72
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 267 2e-71
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 264 2e-70
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 258 8e-69
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 258 1e-68
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 256 4e-68
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 239 6e-63
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 239 6e-63
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 200 3e-51
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 167 3e-41
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 60 5e-09
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 60 9e-09
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 60 1e-08
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 58 4e-08
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 57 7e-08
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 56 1e-07
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 55 1e-07
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 55 1e-07
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 55 1e-07
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 55 3e-07
AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor fam... 55 3e-07
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 54 3e-07
AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor fam... 54 5e-07
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 52 1e-06
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 52 2e-06
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 52 2e-06
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 52 2e-06
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 51 3e-06
AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor ... 51 3e-06
AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor fam... 51 3e-06
AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor fam... 51 4e-06
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 50 7e-06
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 50 8e-06
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/823 (66%), Positives = 625/823 (75%), Gaps = 41/823 (4%)
Query: 1 MKLSTSXXXXXXXXXXXKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNR 60
MKLSTS +KCLNSELWHACAGPLVSLP++G+RVVYFPQGHSEQV+ATTN+
Sbjct: 1 MKLSTSGLGQQGHEG--EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNK 58
Query: 61 EVDGHMPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLP 120
EVDGH+PNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQK+TF+P+ELG+P
Sbjct: 59 EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP 118
Query: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD++ QPPAQELIARDLHDVEWKF
Sbjct: 119 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKF 178
Query: 181 RHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSV 240
RHIFRGQPKRHLLTTGWS+FVSAKRLVAGDSV+FI NEKNQLFLGIR A RPQTI+PSSV
Sbjct: 179 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSV 238
Query: 241 LSSDSMHIGLLXXXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFR 300
LSSDSMHIGLL TNSCFTVFF+PRAS SEFVI LSKY+KAV+HTRISVGMRFR
Sbjct: 239 LSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFR 298
Query: 301 MLFETEESSVRRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
MLFETEESSVRRYMGTITGISDLD+VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL
Sbjct: 299 MLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Query: 361 TTFPMYPSLFPLRLKRPWHPGTTSLQDGRDEATSGLMWLRGGPVDQGFNS-LNFQGAAGM 419
TTFPMYPSLFPLRLKRPWH GT+SL DGR + SGL WLRGG +Q LN+ + G+
Sbjct: 359 TTFPMYPSLFPLRLKRPWHAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYP-SVGL 417
Query: 420 LPWMQQRLDPTLLGNDQNQQYQAMLAAGLQDPGSGYLMRPQMMNFQQPFN-YLQQPGNGN 478
PWMQQRLD + +G D NQQYQAMLAAGLQ+ G G +R Q + Q+P + YLQQ + N
Sbjct: 418 FPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQSASHN 477
Query: 479 SPLXXXXXXXXXXXXSVSSNMLQPQAQVLTENL-SQNLLQKPHN--SXXXXXXXXXXXHT 535
S L S +++ Q Q+++ENL QN+ Q+ N + +
Sbjct: 478 SDL----MLQQQQQQQASRHLMHAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQPDQNA 533
Query: 536 YRDTLLIQSDQLNQRQ----VPSPSYSKPDFLDSSSKFSTSVPPGQNXXXXXXXXXXXXX 591
Y + +Q+ L Q Q +PSPS+ K DF DSS+KF+T+ P
Sbjct: 534 YLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPASG------------- 580
Query: 592 XXXXXXXXXXITDQ--LPQQSWTPKYPPMQVNSFSSTMSH-SPYSGKDSAMGPPHCNSDT 648
IT Q LP+Q T + P N+FS +S Y GK A+ P +
Sbjct: 581 --DGNLLNFSITGQSVLPEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALEP----GNP 634
Query: 649 QNSTLFGVNIDSSGLLLPTTVPGYXXXXXXXXXXXMPLLGDSGFQGSLYACMQDSS-ELL 707
QN +LFGV+ D SGL LP+TVP + M L DSGFQ SLY+CMQD++ ELL
Sbjct: 635 QNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLT-DSGFQNSLYSCMQDTTHELL 692
Query: 708 QSAGQDDPQNQSQTFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSG 767
AGQ + NQ++ FVKVYKSGSVGRSLDISRFSSYHELREEL +MF IEG LEDPLRSG
Sbjct: 693 HGAGQINSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSG 752
Query: 768 WQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGE 810
WQLVFVD+E+D+LLLGDDPWESFVNNVWYIKILSPED+ +MG+
Sbjct: 753 WQLVFVDKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMGD 795
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/801 (66%), Positives = 604/801 (75%), Gaps = 41/801 (5%)
Query: 1 MKLSTSXXXXXXXXXXXKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNR 60
MKLSTS +KCLNSELWHACAGPLVSLP++G+RVVYFPQGHSEQV+ATTN+
Sbjct: 1 MKLSTSGLGQQGHEG--EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNK 58
Query: 61 EVDGHMPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLP 120
EVDGH+PNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQK+TF+P+ELG+P
Sbjct: 59 EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP 118
Query: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD++ QPPAQELIARDLHDVEWKF
Sbjct: 119 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKF 178
Query: 181 RHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSV 240
RHIFRGQPKRHLLTTGWS+FVSAKRLVAGDSV+FI NEKNQLFLGIR A RPQTI+PSSV
Sbjct: 179 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSV 238
Query: 241 LSSDSMHIGLLXXXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFR 300
LSSDSMHIGLL TNSCFTVFF+PRAS SEFVI LSKY+KAV+HTRISVGMRFR
Sbjct: 239 LSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFR 298
Query: 301 MLFETEESSVRRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
MLFETEESSVRRYMGTITGISDLD+VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL
Sbjct: 299 MLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Query: 361 TTFPMYPSLFPLRLKRPWHPGTTSLQDGRDEATSGLMWLRGGPVDQGFNS-LNFQGAAGM 419
TTFPMYPSLFPLRLKRPWH GT+SL DGR + SGL WLRGG +Q LN+ + G+
Sbjct: 359 TTFPMYPSLFPLRLKRPWHAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYP-SVGL 417
Query: 420 LPWMQQRLDPTLLGNDQNQQYQAMLAAGLQDPGSGYLMRPQMMNFQQPFN-YLQQPGNGN 478
PWMQQRLD + +G D NQQYQAMLAAGLQ+ G G +R Q + Q+P + YLQQ + N
Sbjct: 418 FPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQSASHN 477
Query: 479 SPLXXXXXXXXXXXXSVSSNMLQPQAQVLTENL-SQNLLQKPHN--SXXXXXXXXXXXHT 535
S L S +++ Q Q+++ENL QN+ Q+ N + +
Sbjct: 478 SDL----MLQQQQQQQASRHLMHAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQPDQNA 533
Query: 536 YRDTLLIQSDQLNQRQ----VPSPSYSKPDFLDSSSKFSTSVPPGQNXXXXXXXXXXXXX 591
Y + +Q+ L Q Q +PSPS+ K DF DSS+KF+T+ P
Sbjct: 534 YLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPASG------------- 580
Query: 592 XXXXXXXXXXITDQ--LPQQSWTPKYPPMQVNSFSSTMSH-SPYSGKDSAMGPPHCNSDT 648
IT Q LP+Q T + P N+FS +S Y GK A+ P +
Sbjct: 581 --DGNLLNFSITGQSVLPEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALEP----GNP 634
Query: 649 QNSTLFGVNIDSSGLLLPTTVPGYXXXXXXXXXXXMPLLGDSGFQGSLYACMQDSS-ELL 707
QN +LFGV+ D SGL LP+TVP + M L DSGFQ SLY+CMQD++ ELL
Sbjct: 635 QNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLT-DSGFQNSLYSCMQDTTHELL 692
Query: 708 QSAGQDDPQNQSQTFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSG 767
AGQ + NQ++ FVKVYKSGSVGRSLDISRFSSYHELREEL +MF IEG LEDPLRSG
Sbjct: 693 HGAGQINSSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSG 752
Query: 768 WQLVFVDRESDVLLLGDDPWE 788
WQLVFVD+E+D+LLLGDDPWE
Sbjct: 753 WQLVFVDKENDILLLGDDPWE 773
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/438 (79%), Positives = 378/438 (86%), Gaps = 12/438 (2%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K+ LNSELWHACAGPLVSLP G+RVVYFPQGHSEQV+A+TN+EVD H+PNYPSL PQLI
Sbjct: 19 KRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLI 78
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDT 137
CQLHNVTMHADVETDEVYAQMTLQPL +EQKD +LP ELG+PS+QP+NYFCKTLTASDT
Sbjct: 79 CQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDT 138
Query: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 197
STHGGFSVPRRAAEKVFPPLD+SQQPPAQEL+ARDLHD EWKFRHIFRGQPKRHLLTTGW
Sbjct: 139 STHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGW 198
Query: 198 SIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXX 257
S+FVSAKRLVAGDSVLFIWN+KNQL LGIRRANRPQT+MPSSVLSSDSMH+GLL
Sbjct: 199 SVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHA 258
Query: 258 XXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 317
TNS FT+F+NPRASPSEFVIPL+KYVKAVYHTR+SVGMRFRMLFETEESSVRRYMGTI
Sbjct: 259 AATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 318
Query: 318 TGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 377
TGI DLD RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKRP
Sbjct: 319 TGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRP 378
Query: 378 WHPGTTSLQDGRDE-----ATSGLMWLRGGPVDQGFNSLNFQGAAGMLPWMQQRLDPTLL 432
W PG S +++ +S LMW D+G SLNFQG G+ PWMQ RLD + L
Sbjct: 379 WPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQG-MGVNPWMQPRLDTSGL 431
Query: 433 GNDQNQQYQAMLAAGLQD 450
QN YQAM AA LQD
Sbjct: 432 LGMQNDVYQAMAAAALQD 449
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 146/228 (64%), Gaps = 26/228 (11%)
Query: 609 QSWTPKYPPMQVNSFSSTMSHSPY-SGKDSAMGPPHCNSDTQNSTLFGVNIDSSGLLLPT 667
QS T PP V S P+ G++ ++ SD + LFGVNIDSS LL+P
Sbjct: 682 QSHTSNVPPNAV-------SLPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPN 734
Query: 668 TVPGYXXXXXXX-XXXXMPLLG---DSGFQGSLY-----ACMQDSSELLQSA---GQDDP 715
+ +P ++ F G+L +C+ D S LQS+ G ++P
Sbjct: 735 GMSNLRSIGIEGGDSTTLPFTSSNFNNDFSGNLAMTTPSSCI-DESGFLQSSENLGSENP 793
Query: 716 QNQSQTFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDR 775
Q S TFVKVYKSGS GRSLDIS+FSSYHELR EL RMFG+EG+LEDP+RSGWQLVFVDR
Sbjct: 794 Q--SNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDR 851
Query: 776 ESDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQALESI--APSS 821
E+DVLLLGDDPW FV++VW IKILSP+++Q+MG+ + LE + APSS
Sbjct: 852 ENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGK-RGLELLNSAPSS 898
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/438 (79%), Positives = 378/438 (86%), Gaps = 12/438 (2%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K+ LNSELWHACAGPLVSLP G+RVVYFPQGHSEQV+A+TN+EVD H+PNYPSL PQLI
Sbjct: 17 KRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLI 76
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDT 137
CQLHNVTMHADVETDEVYAQMTLQPL +EQKD +LP ELG+PS+QP+NYFCKTLTASDT
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 197
STHGGFSVPRRAAEKVFPPLD+SQQPPAQEL+ARDLHD EWKFRHIFRGQPKRHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 SIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXX 257
S+FVSAKRLVAGDSVLFIWN+KNQL LGIRRANRPQT+MPSSVLSSDSMH+GLL
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHA 256
Query: 258 XXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 317
TNS FT+F+NPRASPSEFVIPL+KYVKAVYHTR+SVGMRFRMLFETEESSVRRYMGTI
Sbjct: 257 AATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 318 TGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 377
TGI DLD RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKRP
Sbjct: 317 TGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRP 376
Query: 378 WHPGTTSLQDGRDE-----ATSGLMWLRGGPVDQGFNSLNFQGAAGMLPWMQQRLDPTLL 432
W PG S +++ +S LMW D+G SLNFQG G+ PWMQ RLD + L
Sbjct: 377 WPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQG-MGVNPWMQPRLDTSGL 429
Query: 433 GNDQNQQYQAMLAAGLQD 450
QN YQAM AA LQD
Sbjct: 430 LGMQNDVYQAMAAAALQD 447
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 146/228 (64%), Gaps = 26/228 (11%)
Query: 609 QSWTPKYPPMQVNSFSSTMSHSPY-SGKDSAMGPPHCNSDTQNSTLFGVNIDSSGLLLPT 667
QS T PP V S P+ G++ ++ SD + LFGVNIDSS LL+P
Sbjct: 680 QSHTSNVPPNAV-------SLPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPN 732
Query: 668 TVPGYXXXXXXX-XXXXMPLLG---DSGFQGSLY-----ACMQDSSELLQSA---GQDDP 715
+ +P ++ F G+L +C+ D S LQS+ G ++P
Sbjct: 733 GMSNLRSIGIEGGDSTTLPFTSSNFNNDFSGNLAMTTPSSCI-DESGFLQSSENLGSENP 791
Query: 716 QNQSQTFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDR 775
Q S TFVKVYKSGS GRSLDIS+FSSYHELR EL RMFG+EG+LEDP+RSGWQLVFVDR
Sbjct: 792 Q--SNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDR 849
Query: 776 ESDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQALESI--APSS 821
E+DVLLLGDDPW FV++VW IKILSP+++Q+MG+ + LE + APSS
Sbjct: 850 ENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGK-RGLELLNSAPSS 896
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/366 (66%), Positives = 297/366 (81%), Gaps = 6/366 (1%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
KK +NS+LWHACAGPLVSLP G+ VVYFPQGHSEQV+A+ ++ D +PNYP+LP +LI
Sbjct: 17 KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPNYPNLPSKLI 75
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLP-SKQPSNYFCKTLTASD 136
C LH+VT+HAD ETDEVYAQMTLQP+ + ++ L ++GL ++QP+ +FCKTLTASD
Sbjct: 76 CLLHSVTLHADTETDEVYAQMTLQPVN-KYDREALLASDMGLKLNRQPTEFFCKTLTASD 134
Query: 137 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 196
TSTHGGFSVPRRAAEK+FPPLDFS QPPAQE++A+DLHD W FRHI+RGQPKRHLLTTG
Sbjct: 135 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTG 194
Query: 197 WSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXX 256
WS+FVS KRL AGDSVLF+ +EK+QL LGIRRANR + SSV+SSDSMHIG+L
Sbjct: 195 WSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAH 254
Query: 257 XXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 316
+S FT+FFNPRASPSEFV+PL+KY KA+Y ++S+GMRFRM+FETE+ VRRYMGT
Sbjct: 255 ANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRMMFETEDCGVRRYMGT 313
Query: 317 ITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLK 375
+TGISDLD VRW S WR+++VGWDESTAG+R RVS+WEIEP+ T F + P F R K
Sbjct: 314 VTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYICPPPF-FRPK 372
Query: 376 RPWHPG 381
P PG
Sbjct: 373 YPRQPG 378
Score = 132 bits (333), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 83/110 (75%), Gaps = 4/110 (3%)
Query: 717 NQSQ---TFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFV 773
NQ+Q T+ KV K GSVGRS+D++R+S Y ELR +L RMFGIEG+LEDPL S W+LV+
Sbjct: 952 NQTQRMRTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYT 1011
Query: 774 DRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQALESIAPSSGQ 823
D E+D+LL+GDDPWE FVN V IKILS ++Q+M D L +I P++ Q
Sbjct: 1012 DHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSLDGDLAAI-PTTNQ 1060
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/397 (61%), Positives = 302/397 (76%), Gaps = 7/397 (1%)
Query: 1 MKLSTSXXXXXXXXXXXKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNR 60
MK +S ++ +NSELWHACAGPL+SLP AG+ VVYFPQGHSEQV+A+ +
Sbjct: 1 MKAPSSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQK 60
Query: 61 EVDGHMPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLP 120
+ D +P+YP+LP +LIC LHNVT++AD ETDEVYAQMTLQP+ + +D L ++GL
Sbjct: 61 QTD-FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLK 118
Query: 121 -SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWK 179
++QP+ +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS QPP QEL+A+D+HD W
Sbjct: 119 LNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWT 178
Query: 180 FRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSS 239
FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI + K QL LGIRRANR Q + SS
Sbjct: 179 FRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSS 238
Query: 240 VLSSDSMHIGLLXXXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRF 299
V+SSDSMHIG+L NS FT+F+NPRA+P+EFV+PL+KY KA+Y ++S+GMRF
Sbjct: 239 VISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRF 297
Query: 300 RMLFETEESSVRRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 359
RM+FETEE VRRYMGT+TGISDLD VRW NS WR++++GWDES AG+R RVS+W+IEP
Sbjct: 298 RMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEP 357
Query: 360 LTTFPMYPSLFPLRLKRPWHPGTTSLQDGRDEATSGL 396
+ T P Y + P RP G + D + S L
Sbjct: 358 VLT-PFY--ICPPPFFRPRFSGQPGMPDDETDMESAL 391
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 720 QTFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRESDV 779
+T+ KV K GSVGRS+D++R+ Y ELR +L RMFGIEG+LEDP S W+LV+VD E+D+
Sbjct: 1037 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1096
Query: 780 LLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQALESIAPSSGQRLNG 827
LL+GDDPWE FVN V IKILS ++Q+M D + P + Q +G
Sbjct: 1097 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGV-PVTNQACSG 1143
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/398 (61%), Positives = 302/398 (75%), Gaps = 8/398 (2%)
Query: 1 MKLSTSXXXXXXXXXXXKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNR 60
MK +S ++ +NSELWHACAGPL+SLP AG+ VVYFPQGHSEQV+A+ +
Sbjct: 1 MKAPSSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQK 60
Query: 61 EVDGHMPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLP 120
+ D +P+YP+LP +LIC LHNVT++AD ETDEVYAQMTLQP+ + +D L ++GL
Sbjct: 61 QTD-FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLK 118
Query: 121 -SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWK 179
++QP+ +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS QPP QEL+A+D+HD W
Sbjct: 119 LNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWT 178
Query: 180 FRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSS 239
FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI + K QL LGIRRANR Q + SS
Sbjct: 179 FRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSS 238
Query: 240 VLSSDSMHIGLLXXXXXXXXTNSCFTVFFNPR-ASPSEFVIPLSKYVKAVYHTRISVGMR 298
V+SSDSMHIG+L NS FT+F+NPR A+P+EFV+PL+KY KA+Y ++S+GMR
Sbjct: 239 VISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMR 297
Query: 299 FRMLFETEESSVRRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 358
FRM+FETEE VRRYMGT+TGISDLD VRW NS WR++++GWDES AG+R RVS+W+IE
Sbjct: 298 FRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
Query: 359 PLTTFPMYPSLFPLRLKRPWHPGTTSLQDGRDEATSGL 396
P+ T P Y + P RP G + D + S L
Sbjct: 358 PVLT-PFY--ICPPPFFRPRFSGQPGMPDDETDMESAL 392
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 720 QTFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRESDV 779
+T+ KV K GSVGRS+D++R+ Y ELR +L RMFGIEG+LEDP S W+LV+VD E+D+
Sbjct: 1038 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1097
Query: 780 LLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQALESIAPSSGQRLNG 827
LL+GDDPWE FVN V IKILS ++Q+M D + P + Q +G
Sbjct: 1098 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGV-PVTNQACSG 1144
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/398 (61%), Positives = 302/398 (75%), Gaps = 8/398 (2%)
Query: 1 MKLSTSXXXXXXXXXXXKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNR 60
MK +S ++ +NSELWHACAGPL+SLP AG+ VVYFPQGHSEQV+A+ +
Sbjct: 1 MKAPSSNGVSPNPVEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQK 60
Query: 61 EVDGHMPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLP 120
+ D +P+YP+LP +LIC LHNVT++AD ETDEVYAQMTLQP+ + +D L ++GL
Sbjct: 61 QTD-FIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLK 118
Query: 121 -SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWK 179
++QP+ +FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS QPP QEL+A+D+HD W
Sbjct: 119 LNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWT 178
Query: 180 FRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSS 239
FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI + K QL LGIRRANR Q + SS
Sbjct: 179 FRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSS 238
Query: 240 VLSSDSMHIGLLXXXXXXXXTNSCFTVFFNPR-ASPSEFVIPLSKYVKAVYHTRISVGMR 298
V+SSDSMHIG+L NS FT+F+NPR A+P+EFV+PL+KY KA+Y ++S+GMR
Sbjct: 239 VISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMR 297
Query: 299 FRMLFETEESSVRRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE 358
FRM+FETEE VRRYMGT+TGISDLD VRW NS WR++++GWDES AG+R RVS+W+IE
Sbjct: 298 FRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
Query: 359 PLTTFPMYPSLFPLRLKRPWHPGTTSLQDGRDEATSGL 396
P+ T P Y + P RP G + D + S L
Sbjct: 358 PVLT-PFY--ICPPPFFRPRFSGQPGMPDDETDMESAL 392
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
Query: 720 QTFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRESDV 779
+T+ KV K GSVGRS+D++R+ Y ELR +L RMFGIEG+LEDP S W+LV+VD E+D+
Sbjct: 1038 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1097
Query: 780 LLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQALESIAPSSGQRLNGSVA 830
LL+GDDPWE FVN V IKILS ++Q+M D + P + Q +G+ +
Sbjct: 1098 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGV-PVTNQACSGATS 1147
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 479 bits (1232), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/365 (61%), Positives = 280/365 (76%), Gaps = 5/365 (1%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K +NSELWHACAGPLV LP G+ V YF QGHSEQV+ +T R +PNYP+LP QL+
Sbjct: 48 KPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLM 107
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGL--PSKQPSNYFCKTLTAS 135
CQ+HNVT+HAD ++DE+YAQM+LQP+ E +D F + G+ SK P+ +FCKTLTAS
Sbjct: 108 CQVHNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGSKHPTEFFCKTLTAS 165
Query: 136 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 195
DTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+ RDLH+ W FRHI+RGQPKRHLLTT
Sbjct: 166 DTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTT 225
Query: 196 GWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXX 255
GWS+FV +KRL AGDSVLFI +EK+QL +G+RRANR QT +PSSVLS+DSMHIG+L
Sbjct: 226 GWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAA 285
Query: 256 XXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 315
+ F +F+NPRA P+EFVIPL+KY KA+ +++SVGMRF M+FETE+S RRYMG
Sbjct: 286 HATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMG 345
Query: 316 TITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 375
TI GISDLD +RWP S WR+++V WDE ++ RVS W+IE + ++PSL LK
Sbjct: 346 TIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLK 404
Query: 376 RPWHP 380
R HP
Sbjct: 405 RQLHP 409
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 69/92 (75%)
Query: 720 QTFVKVYKSGSVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRESDV 779
+T+ KV K+GSVGRS+D++ F Y EL+ + MFG+EG L P SGW+LV+VD ESDV
Sbjct: 793 RTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDV 852
Query: 780 LLLGDDPWESFVNNVWYIKILSPEDIQKMGED 811
LL+GDDPWE FV V I+ILSP ++Q+M E+
Sbjct: 853 LLVGDDPWEEFVGCVRCIRILSPTEVQQMSEE 884
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 253/363 (69%), Gaps = 5/363 (1%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
+ L ELWHACAGPLV++P RV YFPQGH EQV A+TN+ + MP Y LP +L+
Sbjct: 55 EAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLL 113
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDT 137
C++ NV + A+ +TDEVYAQ+TL P +++ L P + + FCKTLTASDT
Sbjct: 114 CRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDT 173
Query: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 197
STHGGFSV RR A++ PPLD S+QPP QEL+A+DLH EW+FRHIFRGQP+RHLL +GW
Sbjct: 174 STHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGW 233
Query: 198 SIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXX 257
S+FVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS SMH+G+L
Sbjct: 234 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 293
Query: 258 XXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 317
T + FTV++ PR SPSEF++P +Y+++V + S+GMRF+M FE EE+ +R+ GTI
Sbjct: 294 ISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGTI 352
Query: 318 TGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 377
GI + D RWP S WRS+KV WDE+++ R RVS W++EP P+L P+ + RP
Sbjct: 353 VGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRP 409
Query: 378 WHP 380
P
Sbjct: 410 KRP 412
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 717 NQSQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDR 775
N S++ KV+K G ++GRS+D+S+F +Y EL EL R+F G+L P + W +V+ D
Sbjct: 730 NSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDE 788
Query: 776 ESDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 808
E+D++L+GDDPW+ F V I I + E+++KM
Sbjct: 789 ENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 253/363 (69%), Gaps = 5/363 (1%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
+ L ELWHACAGPLV++P RV YFPQGH EQV A+TN+ + MP Y LP +L+
Sbjct: 55 EAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLL 113
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDT 137
C++ NV + A+ +TDEVYAQ+TL P +++ L P + + FCKTLTASDT
Sbjct: 114 CRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDT 173
Query: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 197
STHGGFSV RR A++ PPLD S+QPP QEL+A+DLH EW+FRHIFRGQP+RHLL +GW
Sbjct: 174 STHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGW 233
Query: 198 SIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXX 257
S+FVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS SMH+G+L
Sbjct: 234 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 293
Query: 258 XXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 317
T + FTV++ PR SPSEF++P +Y+++V + S+GMRF+M FE EE+ +R+ GTI
Sbjct: 294 ISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGTI 352
Query: 318 TGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 377
GI + D RWP S WRS+KV WDE+++ R RVS W++EP P+L P+ + RP
Sbjct: 353 VGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRP 409
Query: 378 WHP 380
P
Sbjct: 410 KRP 412
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 717 NQSQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDR 775
N S++ KV+K G ++GRS+D+S+F +Y EL EL R+F G+L P + W +V+ D
Sbjct: 730 NSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDE 788
Query: 776 ESDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 808
E+D++L+GDDPW+ F V I I + E+++KM
Sbjct: 789 ENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 253/363 (69%), Gaps = 5/363 (1%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
+ L ELWHACAGPLV++P RV YFPQGH EQV A+TN+ + MP Y LP +L+
Sbjct: 55 EAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLL 113
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDT 137
C++ NV + A+ +TDEVYAQ+TL P +++ L P + + FCKTLTASDT
Sbjct: 114 CRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDT 173
Query: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 197
STHGGFSV RR A++ PPLD S+QPP QEL+A+DLH EW+FRHIFRGQP+RHLL +GW
Sbjct: 174 STHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGW 233
Query: 198 SIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXX 257
S+FVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS SMH+G+L
Sbjct: 234 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 293
Query: 258 XXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 317
T + FTV++ PR SPSEF++P +Y+++V + S+GMRF+M FE EE+ +R+ GTI
Sbjct: 294 ISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGTI 352
Query: 318 TGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 377
GI + D RWP S WRS+KV WDE+++ R RVS W++EP P+L P+ + RP
Sbjct: 353 VGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRP 409
Query: 378 WHP 380
P
Sbjct: 410 KRP 412
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 717 NQSQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDR 775
N S++ KV+K G ++GRS+D+S+F +Y EL EL R+F G+L P + W +V+ D
Sbjct: 730 NSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDE 788
Query: 776 ESDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 808
E+D++L+GDDPW+ F V I I + E+++KM
Sbjct: 789 ENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 253/363 (69%), Gaps = 5/363 (1%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
+ L ELWHACAGPLV++P RV YFPQGH EQV A+TN+ + MP Y LP +L+
Sbjct: 55 EAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLL 113
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDT 137
C++ NV + A+ +TDEVYAQ+TL P +++ L P + + FCKTLTASDT
Sbjct: 114 CRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDT 173
Query: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 197
STHGGFSV RR A++ PPLD S+QPP QEL+A+DLH EW+FRHIFRGQP+RHLL +GW
Sbjct: 174 STHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGW 233
Query: 198 SIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXX 257
S+FVS+KRLVAGD+ +F+ E +L +G+RRA R Q +PSSV+SS SMH+G+L
Sbjct: 234 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 293
Query: 258 XXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 317
T + FTV++ PR SPSEF++P +Y+++V + S+GMRF+M FE EE+ +R+ GTI
Sbjct: 294 ISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGTI 352
Query: 318 TGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 377
GI + D RWP S WRS+KV WDE+++ R RVS W++EP P+L P+ + RP
Sbjct: 353 VGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRP 409
Query: 378 WHP 380
P
Sbjct: 410 KRP 412
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 717 NQSQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDR 775
N S++ KV+K G ++GRS+D+S+F +Y EL EL R+F G+L P + W +V+ D
Sbjct: 730 NSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDE 788
Query: 776 ESDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 808
E+D++L+GDDPW+ F V I I + E+++KM
Sbjct: 789 ENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/372 (51%), Positives = 255/372 (68%), Gaps = 7/372 (1%)
Query: 20 CLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLICQ 79
L ELWHACAGPLV+LP G RV YFP+GH EQ+ A+ ++ ++ MP++ +LP +++C+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 80 LHNVTMHADVETDEVYAQMTLQP-LTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDTS 138
+ N+ A+ ETDEVYAQ+TL P L E P++ P K + FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134
Query: 139 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 198
THGGFSV RR A+ PPLD SQQPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 199 IFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXXX 258
+FVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+SS SMHIG+L
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 259 XTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 318
T + F+VF+ PR S SEF++ +++Y++A ++SVGMRF+M FE EE+ +R+ GTI
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 319 GISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 376
G+ + + W +S WRS+KV WDE ++ R RVS WE+EPL + P P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373
Query: 377 PWHPGTTSLQDG 388
P PG S G
Sbjct: 374 PRPPGLPSPATG 385
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 712 QDDPQNQSQTFVKVYKSGS-VGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQL 770
Q+ Q ++ KV+ GS VGR++D++R Y +L ++L MF I+G+L + + WQ+
Sbjct: 529 QESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQV 587
Query: 771 VFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQAL 814
V+ D E D++++GDDPW F V I I +PE+++K+ L
Sbjct: 588 VYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 631
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/372 (51%), Positives = 255/372 (68%), Gaps = 7/372 (1%)
Query: 20 CLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLICQ 79
L ELWHACAGPLV+LP G RV YFP+GH EQ+ A+ ++ ++ MP++ +LP +++C+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 80 LHNVTMHADVETDEVYAQMTLQP-LTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDTS 138
+ N+ A+ ETDEVYAQ+TL P L E P++ P K + FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134
Query: 139 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 198
THGGFSV RR A+ PPLD SQQPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 199 IFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXXX 258
+FVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+SS SMHIG+L
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 259 XTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 318
T + F+VF+ PR S SEF++ +++Y++A ++SVGMRF+M FE EE+ +R+ GTI
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 319 GISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 376
G+ + + W +S WRS+KV WDE ++ R RVS WE+EPL + P P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373
Query: 377 PWHPGTTSLQDG 388
P PG S G
Sbjct: 374 PRPPGLPSPATG 385
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 712 QDDPQNQSQTFVKVYKSGS-VGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQL 770
Q+ Q ++ KV+ GS VGR++D++R Y +L ++L MF I+G+L + + WQ+
Sbjct: 531 QESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQV 589
Query: 771 VFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQAL 814
V+ D E D++++GDDPW F V I I +PE+++K+ L
Sbjct: 590 VYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 633
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/372 (51%), Positives = 255/372 (68%), Gaps = 7/372 (1%)
Query: 20 CLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLICQ 79
L ELWHACAGPLV+LP G RV YFP+GH EQ+ A+ ++ ++ MP++ +LP +++C+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 80 LHNVTMHADVETDEVYAQMTLQP-LTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDTS 138
+ N+ A+ ETDEVYAQ+TL P L E P++ P K + FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134
Query: 139 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 198
THGGFSV RR A+ PPLD SQQPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 199 IFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXXX 258
+FVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+SS SMHIG+L
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 259 XTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 318
T + F+VF+ PR S SEF++ +++Y++A ++SVGMRF+M FE EE+ +R+ GTI
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 319 GISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 376
G+ + + W +S WRS+KV WDE ++ R RVS WE+EPL + P P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373
Query: 377 PWHPGTTSLQDG 388
P PG S G
Sbjct: 374 PRPPGLPSPATG 385
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 712 QDDPQNQSQTFVKVYKSGS-VGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQL 770
Q+ Q ++ KV+ GS VGR++D++R Y +L ++L MF I+G+L + + WQ+
Sbjct: 534 QESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQV 592
Query: 771 VFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQAL 814
V+ D E D++++GDDPW F V I I +PE+++K+ L
Sbjct: 593 VYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 636
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/372 (51%), Positives = 255/372 (68%), Gaps = 7/372 (1%)
Query: 20 CLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLICQ 79
L ELWHACAGPLV+LP G RV YFP+GH EQ+ A+ ++ ++ MP++ +LP +++C+
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76
Query: 80 LHNVTMHADVETDEVYAQMTLQP-LTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDTS 138
+ N+ A+ ETDEVYAQ+TL P L E P++ P K + FCKTLTASDTS
Sbjct: 77 VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134
Query: 139 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 198
THGGFSV RR A+ PPLD SQQPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194
Query: 199 IFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXXX 258
+FVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+SS SMHIG+L
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254
Query: 259 XTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 318
T + F+VF+ PR S SEF++ +++Y++A ++SVGMRF+M FE EE+ +R+ GTI
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 319 GISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 376
G+ + + W +S WRS+KV WDE ++ R RVS WE+EPL + P P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373
Query: 377 PWHPGTTSLQDG 388
P PG S G
Sbjct: 374 PRPPGLPSPATG 385
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 712 QDDPQNQSQTFVKVYKSGS-VGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQL 770
Q+ Q ++ KV+ GS VGR++D++R Y +L ++L MF I+G+L + + WQ+
Sbjct: 534 QESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQV 592
Query: 771 VFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQAL 814
V+ D E D++++GDDPW F V I I +PE+++K+ L
Sbjct: 593 VYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 636
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/368 (51%), Positives = 241/368 (65%), Gaps = 14/368 (3%)
Query: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLICQL 80
+ SELWHACAGPL LP G VVYFPQGH EQ A + +P + L PQ++C++
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKF-DLNPQIVCRV 119
Query: 81 HNVTMHADVETDEVYAQMTLQPLTP--------EEQKDTFLPMELGLPS--KQPSNYFCK 130
NV + A+ +TDEVY Q+TL PL +E K+ E S K+ + FCK
Sbjct: 120 VNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCK 179
Query: 131 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKR 190
TLTASDTSTHGGFSVPRRAAE F PLD+ QQ P+QELIA+DLH VEWKFRHI+RGQP+R
Sbjct: 180 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 239
Query: 191 HLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGL 250
HLLTTGWSIFVS K LV+GD+VLF+ +E +L LGIRRA RP+ +P S++ +S +
Sbjct: 240 HLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 298
Query: 251 LXXXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSV 310
L T S F VF++PRA+ +EFVIP KY+ ++ + + +G RFRM FE ++S
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCIGTRFRMRFEMDDSPE 357
Query: 311 RRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 370
RR G +TG+ DLD RWPNS WR + V WDES + Q RVS WEI+P + P
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQS 417
Query: 371 PLRLKRPW 378
R KRPW
Sbjct: 418 SPRPKRPW 425
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 5/108 (4%)
Query: 715 PQNQSQTFV-KVYKSGS-VGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVF 772
PQ+ S+ KV+K GS VGR++D+SR + Y +L EL R+F +EG L DP + GW++++
Sbjct: 659 PQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEK-GWRILY 717
Query: 773 VDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQ--ALESIA 818
D E+D++++GDDPW F N VW I + + E+++ +D LE A
Sbjct: 718 TDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNKSCLEQAA 765
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 355 bits (911), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 238/346 (68%), Gaps = 6/346 (1%)
Query: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLICQL 80
L +ELW CAGPLV +P A RV YFPQGH EQ+ A+TN+ ++ LPP+++C++
Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRV 81
Query: 81 HNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASDTSTH 140
+VT+ A+ ETDEVYAQ+TLQP + + + P +G P+KQ + F K LTASDTSTH
Sbjct: 82 LDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVG-PTKQEFHSFVKILTASDTSTH 140
Query: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIF 200
GGFSV R+ A + P LD +Q P QEL+ RDLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTF 200
Query: 201 VSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXXXXT 260
VS+KRLVAGD+ +F+ E L +G+RR R Q+ MP+SV+SS SMH+G+L T
Sbjct: 201 VSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRT 260
Query: 261 NSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGI 320
+ F VF+ PR S+F++ ++KY++A+ H S+G RFRM FE EES R + GTI G
Sbjct: 261 TTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIFTGTIVGS 317
Query: 321 SDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM 365
DL + +WP S WRS++V WDE T +R +VS WEIEP L T P+
Sbjct: 318 GDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPI 362
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 709 SAGQDDPQNQSQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSG 767
S + Q S++ KV G +VGR++D++ SY EL +EL MF I+G+L R
Sbjct: 478 SMSEQKKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDK 535
Query: 768 WQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 808
W +VF D E D++L GDDPW F I I S ++++KM
Sbjct: 536 WIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 576
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 244/350 (69%), Gaps = 9/350 (2%)
Query: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNR-EVDGHMPNYPSLPPQLICQ 79
L +ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+ VD +P + +LPP+++C+
Sbjct: 18 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76
Query: 80 LHNVTMHADVETDEVYAQMTLQPLTPEEQKD-TFLPMELGLPSKQPSNYFCKTLTASDTS 138
+ +VT+ A+ ETDEVYAQ+TLQP E+Q + T L L P+K + F K LTASDTS
Sbjct: 77 VLSVTLKAEHETDEVYAQITLQP--EEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTS 134
Query: 139 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 198
THGGFSV R+ A + P LD +Q P QEL+ARDLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWS 194
Query: 199 IFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXXX 258
FV++KRLVAGD+ +F+ E L +G+RR + Q+ MP+SV+SS SM +G+L
Sbjct: 195 TFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAV 254
Query: 259 XTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 318
T + F VF+ PR S+F+I ++KY+ A+ + S+GMR+RM FE EES R + GTI
Sbjct: 255 TTTTIFVVFYKPRI--SQFIISVNKYMMAMKNG-FSLGMRYRMRFEGEESPERIFTGTII 311
Query: 319 GISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 368
G DL + +WP S WRS+++ WDE ++ +R +VS WEIEP + + P+
Sbjct: 312 GSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 360
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 689 DSGFQGSLYACMQDSSELLQSAGQDDPQNQSQTFVKVYKSG-SVGRSLDISRFSSYHELR 747
DS S C +S S + Q +++ +KV G +VGR++D++ SY EL
Sbjct: 461 DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 518
Query: 748 EELTRMFGIEGKLEDPLRSGWQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQK 807
+EL +MF IEG+L + W +VF D E D +L+GDDPW F + I ++++K
Sbjct: 519 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 576
Query: 808 M 808
M
Sbjct: 577 M 577
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 244/350 (69%), Gaps = 9/350 (2%)
Query: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNR-EVDGHMPNYPSLPPQLICQ 79
L +ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+ VD +P + +LPP+++C+
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 97
Query: 80 LHNVTMHADVETDEVYAQMTLQPLTPEEQKD-TFLPMELGLPSKQPSNYFCKTLTASDTS 138
+ +VT+ A+ ETDEVYAQ+TLQP E+Q + T L L P+K + F K LTASDTS
Sbjct: 98 VLSVTLKAEHETDEVYAQITLQP--EEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTS 155
Query: 139 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 198
THGGFSV R+ A + P LD +Q P QEL+ARDLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 156 THGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWS 215
Query: 199 IFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXXX 258
FV++KRLVAGD+ +F+ E L +G+RR + Q+ MP+SV+SS SM +G+L
Sbjct: 216 TFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAV 275
Query: 259 XTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 318
T + F VF+ PR S+F+I ++KY+ A+ + S+GMR+RM FE EES R + GTI
Sbjct: 276 TTTTIFVVFYKPRI--SQFIISVNKYMMAMKNG-FSLGMRYRMRFEGEESPERIFTGTII 332
Query: 319 GISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 368
G DL + +WP S WRS+++ WDE ++ +R +VS WEIEP + + P+
Sbjct: 333 GSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 381
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 689 DSGFQGSLYACMQDSSELLQSAGQDDPQNQSQTFVKVYKSG-SVGRSLDISRFSSYHELR 747
DS S C +S S + Q +++ +KV G +VGR++D++ SY EL
Sbjct: 482 DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 539
Query: 748 EELTRMFGIEGKLEDPLRSGWQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQK 807
+EL +MF IEG+L + W +VF D E D +L+GDDPW F + I ++++K
Sbjct: 540 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 597
Query: 808 M 808
M
Sbjct: 598 M 598
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 335 bits (860), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 233/353 (66%), Gaps = 28/353 (7%)
Query: 20 CLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPS----LPPQ 75
CL ELWHACAGPL+SLP G+ V+YFPQGH EQ P++ + LPP
Sbjct: 52 CL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQA------------PDFSAAIYGLPPH 97
Query: 76 LICQLHNVTMHADVETDEVYAQMTLQPLTPE---EQKDTFLPMELG------LPSKQPSN 126
+ C++ +V +HA+ TDEVYAQ++L P + + + ++ + ++ G L +
Sbjct: 98 VFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH 157
Query: 127 YFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG 186
FCKTLTASDTSTHGGFSVPRRAAE FPPLD+SQ P+QEL+ARDLH +EW+FRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRG 217
Query: 187 QPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSM 246
QP+RHLLTTGWS FV+ K+LV+GD+VLF+ + +L LG+RRA++ + S + +M
Sbjct: 218 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNM 277
Query: 247 HIGLLXXXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETE 306
+ T+S F++ +NP+AS S F+IP K++K V + +GMRF+ E+E
Sbjct: 278 NHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESE 336
Query: 307 ESSVRRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 359
++S RR G I+GISDLD +RWP S WR + V WD+ A Q RVS WEIEP
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 329 bits (844), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 178/360 (49%), Positives = 236/360 (65%), Gaps = 10/360 (2%)
Query: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLICQL 80
L ELW CAGPLV +P A RV YFPQGH EQ+ A+T + M LPP+++C +
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 81 HNVTMHADVETDEVYAQMTLQPLTPEEQKDTF---LPMELGLPSKQPSNYFCKTLTASDT 137
NV++ A+ +TDEVYAQ+TL P+ E + P EL P + F K LTASDT
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPK---VHSFSKVLTASDT 125
Query: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 197
STHGGFSV R+ A + PPLD +QQ P QEL+A D+H +WKF+HIFRGQP+RHLLTTGW
Sbjct: 126 STHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGW 185
Query: 198 SIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXX 257
S FV++KRLVAGD+ +F+ E +L +G+RRAN Q+ MPSSV+SS SMH+G+L
Sbjct: 186 STFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHA 245
Query: 258 XXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 317
T + F V++ PR S+F+I L+KY++A+ + + SVGMRF+M FE E+S RRY GT+
Sbjct: 246 TQTKTMFIVYYKPRT--SQFIISLNKYLEAMSN-KFSVGMRFKMRFEGEDSPERRYSGTV 302
Query: 318 TGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 377
G+ D + W +S WR ++V WDE + R +VS WEIEP P L+ KRP
Sbjct: 303 IGVKDC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRP 361
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 648 TQNSTLFGVNIDSSGLLLPTTVPGYXXXXXXXXXXXMPLLGDSGFQGSLYACMQDSSELL 707
T N LFG+++ SS L VP P + S + + + +
Sbjct: 448 TANYRLFGIDLMSSSL----AVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQE 503
Query: 708 QSAG-----QDDPQNQSQTFVKVYKSGS-VGRSLDISRFSSYHELREELTRMFGIEGKLE 761
+ G Q + +++ KV G VGR++D++ Y+EL +++ ++F I+G+L
Sbjct: 504 PAEGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELR 563
Query: 762 DPLRSGWQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 808
R+ W++VF D E D++L+GDDPW F N V I I S E+++KM
Sbjct: 564 S--RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 608
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 329 bits (844), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 178/360 (49%), Positives = 236/360 (65%), Gaps = 10/360 (2%)
Query: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLICQL 80
L ELW CAGPLV +P A RV YFPQGH EQ+ A+T + M LPP+++C +
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 81 HNVTMHADVETDEVYAQMTLQPLTPEEQKDTF---LPMELGLPSKQPSNYFCKTLTASDT 137
NV++ A+ +TDEVYAQ+TL P+ E + P EL P + F K LTASDT
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPK---VHSFSKVLTASDT 125
Query: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 197
STHGGFSV R+ A + PPLD +QQ P QEL+A D+H +WKF+HIFRGQP+RHLLTTGW
Sbjct: 126 STHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGW 185
Query: 198 SIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXXX 257
S FV++KRLVAGD+ +F+ E +L +G+RRAN Q+ MPSSV+SS SMH+G+L
Sbjct: 186 STFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHA 245
Query: 258 XXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 317
T + F V++ PR S+F+I L+KY++A+ + + SVGMRF+M FE E+S RRY GT+
Sbjct: 246 TQTKTMFIVYYKPRT--SQFIISLNKYLEAMSN-KFSVGMRFKMRFEGEDSPERRYSGTV 302
Query: 318 TGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 377
G+ D + W +S WR ++V WDE + R +VS WEIEP P L+ KRP
Sbjct: 303 IGVKDC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRP 361
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 648 TQNSTLFGVNIDSSGLLLPTTVPGYXXXXXXXXXXXMPLLGDSGFQGSLYACMQDSSELL 707
T N LFG+++ SS L VP P + S + + + +
Sbjct: 450 TANYRLFGIDLMSSSL----AVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQE 505
Query: 708 QSAG-----QDDPQNQSQTFVKVYKSGS-VGRSLDISRFSSYHELREELTRMFGIEGKLE 761
+ G Q + +++ KV G VGR++D++ Y+EL +++ ++F I+G+L
Sbjct: 506 PAEGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELR 565
Query: 762 DPLRSGWQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 808
R+ W++VF D E D++L+GDDPW F N V I I S E+++KM
Sbjct: 566 S--RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 610
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 217/364 (59%), Gaps = 19/364 (5%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW CAGPL +P G V YFPQG+ E V A+T E++ P LP +L
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPSKLQ 79
Query: 78 CQLHNVTMHADVETDEVYAQMTLQP-----LTPEEQKDTFLPMELGLPSKQPSNYFCKTL 132
C++ + + + +DE+YA++TL P + P + ++ F P+ N F K L
Sbjct: 80 CRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRPL---------VNSFTKVL 130
Query: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 192
TASDTS +GGFSVP++ A + PPLD SQ PAQE++A DLHD +W+FRH +RG P+RH
Sbjct: 131 TASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHS 190
Query: 193 LTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLX 252
LTTGW+ F+++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 191 LTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIA 250
Query: 253 XXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRR 312
F V + PR+ S+F++ K++ AV + + +VG RF M FE ++ S RR
Sbjct: 251 SAKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERR 307
Query: 313 YMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 372
Y GTI G+SD + W S WRS++V WDE + R +VS WEIE L P L
Sbjct: 308 YFGTIIGVSDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSLL 366
Query: 373 RLKR 376
+ KR
Sbjct: 367 KNKR 370
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 719 SQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRES 777
S+T KV G ++GR++D+S + Y +L EL ++F I+G+L+ R+ W++ F D +
Sbjct: 510 SRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKIAFTDSDG 567
Query: 778 DVLLLGDDPWESFVNNVWYIKILSPEDIQ 806
+L+GDDPW F V I I S E+++
Sbjct: 568 YEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 208/349 (59%), Gaps = 19/349 (5%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW CAGPL +P G +V YFPQGH E V A+T E++ P P +L
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQP-ICDFPSKLQ 79
Query: 78 CQLHNVTMHADVETDEVYAQMTLQP-----LTPEEQKDTFLPMELGLPSKQPSNYFCKTL 132
C++ + + + +DE YA++TL P + P + ++ F P+ N F K L
Sbjct: 80 CRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRPL---------VNSFTKVL 130
Query: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 192
TASDTS HGGFSVP++ A + PPLD SQ P QE++A DLH +W+FRHI+RG +RHL
Sbjct: 131 TASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHL 190
Query: 193 LTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLX 252
LT GW+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S +SM G++
Sbjct: 191 LTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIA 250
Query: 253 XXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRR 312
F V + PR+ S+F++ K++ V + + +VG RF M FE ++ S RR
Sbjct: 251 SAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFSERR 307
Query: 313 YMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 361
GTI G+SD + W S WRS++V WDE + R +VS W+IE LT
Sbjct: 308 SFGTIIGVSDF-SPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLT 355
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 719 SQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRES 777
++T KV G ++GR++D+S + Y +L EL ++F ++G+L+ R+ W++ F + E
Sbjct: 509 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--ARNQWEIAFTNNEE 566
Query: 778 DVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEDQALES 816
D +L+G+DPW F N V I I S E+++ + ++L S
Sbjct: 567 DKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSRKSLSS 605
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/364 (41%), Positives = 213/364 (58%), Gaps = 19/364 (5%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW CAGPL +P G +V YFPQGH E V +T E++ P LP +L
Sbjct: 21 KSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPSKLQ 79
Query: 78 CQLHNVTMHADVETDEVYAQMTLQP-----LTPEEQKDTFLPMELGLPSKQPSNYFCKTL 132
C++ + + + +DE YA++TL P + P + ++ F P+ N F K L
Sbjct: 80 CRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPL---------VNSFTKVL 130
Query: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 192
TASDTS HGGF VP++ A + P LD SQ PAQEL+A DLH +W+F H +RG P+RHL
Sbjct: 131 TASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHL 190
Query: 193 LTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLX 252
LTTGW+ F ++K+LVAGD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 191 LTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVA 250
Query: 253 XXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRR 312
FTV + PR+ S+F++ K++ AV + + +VG RF M E ++ S RR
Sbjct: 251 SAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSERR 307
Query: 313 YMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 372
GTI G+SD + W S WRS++V WDE T+ +VS W+IE L P F L
Sbjct: 308 CFGTIIGVSDF-SPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAINVPRSFLL 366
Query: 373 RLKR 376
+ KR
Sbjct: 367 KNKR 370
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 719 SQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRES 777
S+T KV G ++GR++D+S + Y +L EL ++F I+G+L+ R+ W++ F D +
Sbjct: 510 SRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWEIAFTDSDE 567
Query: 778 DVLLLGDDPWESFVNNVWYIKI 799
D +L+GDDPW F N V I I
Sbjct: 568 DKMLVGDDPWPEFCNMVKKIFI 589
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 272 bits (695), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 206/344 (59%), Gaps = 6/344 (1%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW CAGPL +P G +V YFPQG+ E V A+T E++ P LP +L
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQ 79
Query: 78 CQLHNVTMHADVETDEVYAQMTLQP-LTPEEQKDTFLPMELGLPSKQPSNYFCKTLTASD 136
C++ + + + +DE YA++TL P T E +P + + N F K LTASD
Sbjct: 80 CRVIAIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRPLVNSFTKVLTASD 139
Query: 137 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 196
S +G FSVP++ A + PPLD SQ PAQEL+A DLH +W FRH +RG P+RHLLTTG
Sbjct: 140 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 199
Query: 197 WSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXXXX 256
W+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 200 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 259
Query: 257 XXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 316
F V + PR+ S+F++ K++ AV + + +VG RF M FE ++ S RRY GT
Sbjct: 260 AFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGT 316
Query: 317 ITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
I G+S+ + W S WRS++V WDE + R +VS WEIE L
Sbjct: 317 IIGVSNF-SPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL 359
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 719 SQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRES 777
++T KV G ++GR++D+S + Y +L EL ++F ++G+L+ R+ W+++F +
Sbjct: 515 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKIIFTGSDE 572
Query: 778 DVLLLGDDPWESFVNNVWYIKI 799
D +L+GDDPW F N V I I
Sbjct: 573 DEMLVGDDPWPEFCNMVKRIYI 594
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 269 bits (687), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 206/346 (59%), Gaps = 13/346 (3%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW+ CAGPL LP G +V YFPQGH E + +T E+D P + LP +L
Sbjct: 19 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLR 77
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYF-CKTLTASD 136
C++ + D TDEVYAQ++L P T E + + +++P YF K LTASD
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASD 132
Query: 137 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT- 195
S GG +P++ A + FPPLD SQ Q L+A+DL+ EW F+H+FRG P+RH+ T+
Sbjct: 133 VSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSG 192
Query: 196 -GWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXX 254
GWS+F + KRL+ GD + + E +L GIRRA Q +PSSV+S++ M G++
Sbjct: 193 GGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASV 252
Query: 255 XXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 314
T F V + P S S+FVI K+V A+ + I VG RFRM FE ++ S +RY
Sbjct: 253 VNAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYD 309
Query: 315 GTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
GTI G++D+ + W +S WRS+KV WDE + R +VS W+IE L
Sbjct: 310 GTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 354
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 209/364 (57%), Gaps = 21/364 (5%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW CAGPL +P G V YFPQG+ E V A+T E++ P LP +L
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPSKLQ 79
Query: 78 CQLHNVTMHADVETDEVYAQMTLQP-----LTPEEQKDTFLPMELGLPSKQPSNYFCKTL 132
C++ + + + +DE YA++TL P + P + ++ F P+ N F K L
Sbjct: 80 CRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRPL---------VNSFTKVL 130
Query: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 192
TASDTS +GGF VP++ A + PPL PAQEL+A+DLH +W+FRH +RG P+RH
Sbjct: 131 TASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHS 186
Query: 193 LTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLX 252
LTTGW+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M G++
Sbjct: 187 LTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIA 246
Query: 253 XXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRR 312
F V + P S+F++ K++ A+ + + VG RF M FE ++ S RR
Sbjct: 247 SAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSERR 305
Query: 313 YMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 372
Y GTI G++D + W S WRS++V WDE + R +VS WEIE L + P L
Sbjct: 306 YFGTIIGVNDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSSLL 364
Query: 373 RLKR 376
+ KR
Sbjct: 365 KNKR 368
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 719 SQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRES 777
++T KV G ++GR++D+S + Y +L EL ++F ++G+L+ R+ W++ F D +
Sbjct: 494 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKIAFTDSDG 551
Query: 778 DVLLLGDDPWESFVNNVWYIKILSPEDIQ 806
+L+GDDPW F V I I S E+++
Sbjct: 552 YEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 213/396 (53%), Gaps = 61/396 (15%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
+K L+ +LWHACAG +V +P+ + V YF QGH+E A D H P +PP ++
Sbjct: 4 EKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLIL 56
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGL--PS-------KQPSNYF 128
C++ +V AD ETDEV+A++TL PL P D LGL PS K+ F
Sbjct: 57 CRVVSVKFLADAETDEVFAKITLLPL-PGNDLDLENDAVLGLTPPSSDGNGNGKEKPASF 115
Query: 129 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQP 188
KTLT SD + GGFSVPR AE +FP LD+S +PP Q +IA+D+H WKFRHI+RG P
Sbjct: 116 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTP 175
Query: 189 KRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHI 248
+RHLLTTGWS FV+ K+L+AGDS++F+ +E L +GIRRA R S SD+ +
Sbjct: 176 RRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGL---GSNAGSDNPYP 232
Query: 249 GLLXXXXXXXXTNS---------------------------------------CFTVFFN 269
G T + F V +
Sbjct: 233 GFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYY 292
Query: 270 PRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITGISDLDTVRW 328
PRAS EF + + V++ R GMRF+M FETE+SS + +MGT++ + D +RW
Sbjct: 293 PRASTPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 351
Query: 329 PNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 364
PNS WR ++V WDE + RVS W +E ++ P
Sbjct: 352 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 387
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 209/348 (60%), Gaps = 21/348 (6%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW CAGPL +P G ++ YFPQG+ E V A+T E++ P LP +L
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPSKLQ 79
Query: 78 CQLHNVTMHADVETDEVYAQMTLQP-----LTPEEQKDTFLPMELGLPSKQPSNYFCKTL 132
C++ + + + +DE YA++TL P + P + ++ F P+ N F K L
Sbjct: 80 CRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPL---------VNSFTKVL 130
Query: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 192
TASDTS GGF VP++ A + PPLD SQ P QEL+A DLH +W+F H +RG P+RHL
Sbjct: 131 TASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHL 188
Query: 193 LTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLX 252
LTTGW+ F ++K+LVAGD ++F+ E +L +GIRRA Q +PSS++S +SM G++
Sbjct: 189 LTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIA 248
Query: 253 XXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRR 312
F V + PR+ S+F++ K++ AV + + +VG RF M FE ++ S RR
Sbjct: 249 SAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERR 305
Query: 313 YMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Y GTI G+SD + W S WR+++V WDE + R +VS WEIE L
Sbjct: 306 YFGTIIGVSDF-SPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL 352
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 719 SQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRES 777
++T KV G ++ R++D+S + Y +L EL +F ++G+L+ R+ W++ F D +
Sbjct: 508 TRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQT--RNQWEIAFTDSDD 565
Query: 778 DVLLLGDDPWESFVNNVWYIKIL 800
D +L+GDDPW F N V I I
Sbjct: 566 DKMLVGDDPWPEFCNMVKKILIF 588
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 258 bits (660), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 228/422 (54%), Gaps = 74/422 (17%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
+K L+ +LWHACAG +V +P ++V YFPQGH+E + G++P +PP ++
Sbjct: 13 EKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLP----IPPMVL 65
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELG----------LPSKQPSNY 127
C++ + AD E+DEV+A++ L PL + D ++ E G K PS
Sbjct: 66 CRVLAIKYMADAESDEVFAKLRLIPL----KDDEYVDHEYGDGEDSNGFESNSEKTPS-- 119
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 187
F KTLT SD + GGFSVPR AE +FP LD++ +PP Q ++A+D+H WKFRHI+RG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGT 179
Query: 188 PKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANR------PQ-------- 233
P+RHLLTTGWS FV+ K+LVAGDS++F+ E L +GIRRA R P+
Sbjct: 180 PRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPI 239
Query: 234 --TIMPSSVLSSD-----------------SMHIGLLXXXXXXXXTNSCFTVFFNPRASP 274
+ SS+L D + + + F V + PRAS
Sbjct: 240 GGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRAST 299
Query: 275 SEFVIPLSKYVKAVYHTRI--SVGMRFRMLFETEESS-VRRYMGTITGISDLDTVRWPNS 331
SEF + K + A RI GMRF+M FETE+SS + +MGT++ ++ D +RWPNS
Sbjct: 300 SEFCV---KALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNS 356
Query: 332 HWRSVKVGWDESTAGERQPRVSLWEIE--------PLTTFPMYPSLFPLRLKRPWHPGTT 383
WR ++V WDE + RV+ W +E PLT+F P +RL P HP
Sbjct: 357 PWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS--PPRKKMRL--PQHPDYN 412
Query: 384 SL 385
+L
Sbjct: 413 NL 414
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/249 (50%), Positives = 172/249 (69%), Gaps = 4/249 (1%)
Query: 120 PSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWK 179
P+K + F K LTASDTSTHGGFSV R+ A + P LD +Q P QEL+ARDLH EW+
Sbjct: 29 PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 88
Query: 180 FRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSS 239
F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E L +G+RR + Q+ MP+S
Sbjct: 89 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPAS 148
Query: 240 VLSSDSMHIGLLXXXXXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRF 299
V+SS SM +G+L T + F VF+ PR S+F+I ++KY+ A+ + S+GMR+
Sbjct: 149 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNG-FSLGMRY 205
Query: 300 RMLFETEESSVRRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 359
RM FE EES R + GTI G DL + +WP S WRS+++ WDE ++ +R +VS WEIEP
Sbjct: 206 RMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP 264
Query: 360 LTTFPMYPS 368
+ + P+
Sbjct: 265 FSPSALTPT 273
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 689 DSGFQGSLYACMQDSSELLQSAGQDDPQNQSQTFVKVYKSGS-VGRSLDISRFSSYHELR 747
DS S C +S S + Q +++ +KV G+ VGR++D++ SY EL
Sbjct: 374 DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 431
Query: 748 EELTRMFGIEGKLEDPLRSGWQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQK 807
+EL +MF IEG+L + W +VF D E D +L+GDDPW F + I ++++K
Sbjct: 432 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 489
Query: 808 M 808
M
Sbjct: 490 M 490
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 239 bits (610), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 189/346 (54%), Gaps = 39/346 (11%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW+ CAGPL LP G +V YFPQGH E + +T E+D P + LP +L
Sbjct: 19 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLR 77
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYF-CKTLTASD 136
C++ + D TDEVYAQ++L P T E + + +++P YF K LTASD
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASD 132
Query: 137 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT- 195
S GG +P++ A + FPPLD SQ Q L+A+DL+ EW F+H+FRG P+RH+ T+
Sbjct: 133 VSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSG 192
Query: 196 -GWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXX 254
GWS+F + KRL+ GD + + E +L GIRRA Q +PSSV+S++ M G++
Sbjct: 193 GGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASV 252
Query: 255 XXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 314
T F V + P RM FE ++ S +RY
Sbjct: 253 VNAFKTKCMFNVVYKP-----------------------------RMQFEGKDFSEKRYD 283
Query: 315 GTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
GTI G++D+ + W +S WRS+KV WDE + R +VS W+IE L
Sbjct: 284 GTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 328
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 722 FVKVYKSG-SVGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDRESDVL 780
KV+ G ++ R++D++ Y++L ++L +F ++ +L R+ W++VF + E +
Sbjct: 435 LTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRT--RNQWEIVFTNNEGAEM 492
Query: 781 LLGDDPWESFVNNVWYIKILSPEDIQKM 808
L+GDDPW F N I I S E+I+KM
Sbjct: 493 LVGDDPWPEFCNMAKRIFICSKEEIKKM 520
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 239 bits (610), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 189/346 (54%), Gaps = 39/346 (11%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW+ CAGPL LP G +V YFPQGH E + +T E+D P + LP +L
Sbjct: 19 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLR 77
Query: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGLPSKQPSNYF-CKTLTASD 136
C++ + D TDEVYAQ++L P T E + + +++P YF K LTASD
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASD 132
Query: 137 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT- 195
S GG +P++ A + FPPLD SQ Q L+A+DL+ EW F+H+FRG P+RH+ T+
Sbjct: 133 VSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSG 192
Query: 196 -GWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMPSSVLSSDSMHIGLLXXX 254
GWS+F + KRL+ GD + + E +L GIRRA Q +PSSV+S++ M G++
Sbjct: 193 GGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASV 252
Query: 255 XXXXXTNSCFTVFFNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 314
T F V + P RM FE ++ S +RY
Sbjct: 253 VNAFKTKCMFNVVYKP-----------------------------RMQFEGKDFSEKRYD 283
Query: 315 GTITGISDLDTVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
GTI G++D+ + W +S WRS+KV WDE + R +VS W+IE L
Sbjct: 284 GTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 328
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/488 (31%), Positives = 221/488 (45%), Gaps = 54/488 (11%)
Query: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLICQL 80
++ +W ACAG V +P +RV YFPQGH E + PS + C +
Sbjct: 16 VDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPL--------LSTLPSSTSPVPCII 67
Query: 81 HNVTMHADVETDEVYAQMTLQPLTPEEQKDT----FLPMELGLPSKQPSNYFCKTLTASD 136
++ + AD TDEV+A + LQP+T ++ T F + + F K LT SD
Sbjct: 68 TSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSD 127
Query: 137 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 196
+ GGFSVPR A+ VFP L+F PP Q+L D+H W FRHI+RG P+RHLLTTG
Sbjct: 128 ANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTG 187
Query: 197 WSIFVSAKRLVAGDSVLFIWNEKNQLFLGIRRANRPQTIMP---------------SSVL 241
WS FV++K+L+AGDSV+F+ +++F+G+RR + SSV
Sbjct: 188 WSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVA 247
Query: 242 SSDS---------MHIGLLXXXXXXXXTNSC-----FTVFFNPRASPSEFVIPLSKYVKA 287
D G L N F V F P A SEFV+ ++ V++
Sbjct: 248 KEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAEDVES 306
Query: 288 VYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGE 347
+ G R +M ETE+SS + I + +T W S W+ +++ WDE +
Sbjct: 307 SMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQ 366
Query: 348 RQPRVSLWEIEPLTTFPMYPSLFP--LRLKRPWHPGTTSLQDGRDEA---TSGLMWLRG- 401
RV+ W++E + FP RLK P PG L E SGL
Sbjct: 367 NVKRVNPWQVEIAAHATQLHTPFPPAKRLKYP-QPGGGFLSGDDGEILYPQSGLSSAAAP 425
Query: 402 GPVDQGFNSLNF-QGAAGMLPWMQQRLDPT-LLGNDQNQQYQAMLAAGLQDPGSGYLMRP 459
P F+ F G G + +PT +G + Q + + L D G +
Sbjct: 426 DPSPSMFSYSTFPAGMQGARQYDFGSFNPTGFIGGNPPQLFTNNFLSPLPDLGK---VST 482
Query: 460 QMMNFQQP 467
+MMNF P
Sbjct: 483 EMMNFGSP 490
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 126/215 (58%), Gaps = 18/215 (8%)
Query: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREVDGHMPNYPSLPPQLI 77
K + +LW CAGPL +P G +V YFPQGH E V A+T E++ PN LP +L
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPSKLQ 79
Query: 78 CQLHNVTMHADVETDEVYAQMTLQP-----LTPEEQKDTFLPMELGLPSKQPSNYFCKTL 132
C++ + + + +DE Y ++TL P + P E ++ F P+ N F K L
Sbjct: 80 CRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTENENQFRPI---------VNSFTKVL 130
Query: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 192
TASDTS G FSVP + A + PPLD SQ PAQELIA DLH +W+F+H +R P+
Sbjct: 131 TASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD- 188
Query: 193 LTTGWSIFVSAKRLVAGDSVLFIWNEKNQLFLGIR 227
TTGW+ F ++K+LV GD ++F E +L +GIR
Sbjct: 189 -TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 113 LPMELGLPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARD 172
LPM + +P + + F K +T SD +P++ AE+ FP LD S L +D
Sbjct: 42 LPMMM-IPPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQD 99
Query: 173 LHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLF---IWNEKNQLFLGIRRA 229
+ W+FR+ + + +++T GWS FV K+L AGD V F I +E + L I
Sbjct: 100 RNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWR 159
Query: 230 NRP 232
+RP
Sbjct: 160 HRP 162
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 108 QKDTFLPMELGLPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQE 167
Q+D P+E S + + F K +T SD +P++ AE+ FP LD S + +
Sbjct: 3 QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNK 61
Query: 168 LIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWN--EKNQL 222
+ + D W+FR+ + + +++T GWS FV K+L AGD V F + K++L
Sbjct: 62 GLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKL 121
Query: 223 FLGIRRANRPQ 233
++ RR RP+
Sbjct: 122 YIDWRR--RPK 130
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 717 NQSQTFVKVYKSGS-VGRSLDISRFSSYHELREELTRMFGIEGKLEDPLRSGWQLVFVDR 775
+ + FVKVY G +GR LD+ FS Y L E L+ MF + R L + D+
Sbjct: 69 DDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDK 128
Query: 776 ESDVLLLGDDPWESFVNNVWYIKILSPE 803
+ D +++GD PW+ F+ V +KI PE
Sbjct: 129 DGDWMMVGDIPWDMFLETVRRLKITRPE 156
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 98 MTLQPLTPEEQKDTFLPMELGLPSKQPSN---YFCKTLTASDTSTHGGFSVPRRAAEKVF 154
MT LT +E ++ P+ +++ ++ F K +T SD +P++ AE+ F
Sbjct: 2 MTDLSLTRDEDEEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFF 61
Query: 155 PPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLF 214
P LD S L DL W+FR+ + + +++T GWS FV K+L AGD V F
Sbjct: 62 P-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSF 120
Query: 215 IW-----NEKNQLFLGIRRANRPQT 234
++LF+ RR RP+
Sbjct: 121 QRCVGDSGRDSRLFIDWRR--RPKV 143
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 703 SSELLQSAGQDDPQNQSQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMF-GIEG-- 758
+ EL + + +P+ Q FVKV G +GR +D+ SSY L + L MF G+ G
Sbjct: 107 NDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTT 166
Query: 759 --KLEDPLR-----SGWQLVFVDRESDVLLLGDDPWESFVNNVWYIKIL 800
+ PLR S + L + D+E D +L+GD PW F+N+V ++I+
Sbjct: 167 CREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIM 215
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFP-PLDFSQQPPAQELIA-RDLHDVEWKFRHIFR 185
F KT+T SD +P+ AEK FP PL + L+ D++ W+FR+ +
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 186 GQPKRHLLTTGWSIFVSAKRLVAGDSVLFIW-NEKNQLFL 224
+ ++LT GWS FV KRL AGD + F N+++Q F
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFF 282
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 722 FVKVYKSG-SVGRSLDISRFSSYHELREELTRMF--------GIEGKLEDPLR-----SG 767
F+KV G ++GR +D++ SSY L + L MF G+ + PLR S
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 768 WQLVFVDRESDVLLLGDDPWESFVNNVWYIKIL 800
+ L + D+E D +L+GD PW F+N+V ++++
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 722 FVKVYKSG-SVGRSLDISRFSSYHELREELTRMF--------GIEGKLEDPLR-----SG 767
F+KV G ++GR +D++ SSY L + L MF G+ + PLR S
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189
Query: 768 WQLVFVDRESDVLLLGDDPWESFVNNVWYIKIL 800
+ L + D+E D +L+GD PW F+N+V ++++
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 722 FVKVYKSG-SVGRSLDISRFSSYHELREELTRMF--------GIEGKLEDPLR-----SG 767
F+KV G ++GR +D++ SSY L + L MF G+ + PLR S
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 768 WQLVFVDRESDVLLLGDDPWESFVNNVWYIKIL 800
+ L + D+E D +L+GD PW F+N+V ++++
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180
S++ + F K LT SD +P++ AE FP L+ +Q L +D + W+F
Sbjct: 29 SERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFP-LEDNQN--GTVLDFQDKNGKMWRF 85
Query: 181 RHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLF 214
R+ + + +++T GWS FV K+L AGD+V F
Sbjct: 86 RYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 119
>AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3649165-3651271 REVERSE LENGTH=267
Length = 267
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 123 QPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPL----------DFSQQPPAQELIARD 172
Q + F K+LT SD +P++ AEK FP D + L D
Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED 83
Query: 173 LHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWN--EKNQLFLGIRR 228
WKFR+ + + ++LT GWS +V K L AGD V F + + ++LF+G RR
Sbjct: 84 ESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVE---WKFRHIF 184
F K LT SD +P++ AE+ FP L + ++ + D E W+FR+ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 185 RGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKN--QLFLGIRR 228
+ ++LT GWS +V K L AGD VLF + + + F+G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3650579-3651271 REVERSE LENGTH=230
Length = 230
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 123 QPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPL----------DFSQQPPAQELIARD 172
Q + F K+LT SD +P++ AEK FP D + L D
Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED 83
Query: 173 LHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWN--EKNQLFLGIRR 228
WKFR+ + + ++LT GWS +V K L AGD V F + + ++LF+G RR
Sbjct: 84 ESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 141
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA--RDLHDVEWKFRHIFR 185
F K LT SD +P++ AE+ FP + + L+ D W+FR+ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 186 GQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKN--QLFLGIRR 228
+ ++LT GWS +V K L AGD VLF + + + F+G RR
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 187
F K +T SD +P+ AEK FP + L D++ W+FR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 188 PKRHLLTTGWSIFVSAKRLVAGDSVLFIWN--EKNQLFLG 225
+ ++LT GWS FV K L AGD V F + + QL++G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFP-PLDFSQQPPAQELIARDLHDVE---WKFRHI 183
F K +T SD +P++ AEK FP P S P + + + DV W+FR+
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLP---SPSPAVTKGVLINFEDVNGKVWRFRYS 244
Query: 184 FRGQPKRHLLTTGWSIFVSAKRLVAGDSVLF 214
+ + ++LT GWS FV K L AGD V F
Sbjct: 245 YWNSSQSYVLTKGWSRFVKEKNLRAGDVVTF 275
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFP-PLDFSQQPPAQELIARDLHDVE---WKFRHI 183
F K +T SD +P++ AEK FP P S P + + + DV W+FR+
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLP---SPSPAVTKGVLINFEDVNGKVWRFRYS 244
Query: 184 FRGQPKRHLLTTGWSIFVSAKRLVAGDSVLF 214
+ + ++LT GWS FV K L AGD V F
Sbjct: 245 YWNSSQSYVLTKGWSRFVKEKNLRAGDVVTF 275
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 704 SELLQSAGQDDPQNQSQTFVKVYKSGS-VGRSLDISRFSSYHELREELTRMF-------- 754
S+ + D + ++ FVKV G +GR +D++ Y L L MF
Sbjct: 120 SQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSR 179
Query: 755 --GIEGKLEDPLR------SGWQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQ 806
+G +E P++ SG L + D+E D +L+GD PW F+ +V ++I+ +
Sbjct: 180 TLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS--E 237
Query: 807 KMGEDQALESI 817
G+D ++ I
Sbjct: 238 ATGKDDIMKQI 248
>AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor
family protein | chr1:8981891-8982976 REVERSE LENGTH=361
Length = 361
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFP------PLDFSQQPPAQELIA-RDLHDVEWKF 180
F KT+T SD +P++ AEK FP + + P LI D W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 181 RHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLF 214
R+ + + ++LT GWS FV K L AGD V F
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288
>AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=282
Length = 282
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFP---------PLDFSQQPPAQELIARDLHDVEW 178
F K+LT SD +P++ AEK FP D S L D W
Sbjct: 46 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSW 105
Query: 179 KFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKN--QLFLGIRR 228
+FR+ + + ++LT GWS FV K+L GD V F + + +LF+G RR
Sbjct: 106 RFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRR 157
>AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=267
Length = 267
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 128 FCKTLTASDTSTHGGFSVPRRAAEKVFP---------PLDFSQQPPAQELIARDLHDVEW 178
F K+LT SD +P++ AEK FP D S L D W
Sbjct: 46 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSW 105
Query: 179 KFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKN--QLFLGIRR 228
+FR+ + + ++LT GWS FV K+L GD V F + + +LF+G RR
Sbjct: 106 RFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRR 157
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 704 SELLQSAGQDDPQNQSQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMF-------- 754
S+ + D + ++ FVKV G +GR +D++ Y L L MF
Sbjct: 120 SQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSR 179
Query: 755 --GIEGKLEDPLR------SGWQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPEDIQ 806
+G +E P++ SG L + D+E D +L+GD PW F+ +V ++I+ +
Sbjct: 180 TLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEAT 239
Query: 807 KMG 809
G
Sbjct: 240 GKG 242
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 704 SELLQSAGQDDPQNQSQTFVKVYKSG-SVGRSLDISRFSSYHELREELTRMF-------- 754
S+ + D + ++ FVKV G +GR +D++ Y L L MF
Sbjct: 120 SQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSR 179
Query: 755 --GIEGKLEDPLR------SGWQLVFVDRESDVLLLGDDPWESFVNNVWYIKILSPED 804
+G +E P++ SG L + D+E D +L+GD PW F+ +V ++I+ +
Sbjct: 180 TLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237