Miyakogusa Predicted Gene
- Lj2g3v1195240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1195240.1 Non Chatacterized Hit- tr|I1LM27|I1LM27_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.47,0,no
description,DNA-binding pseudobarrel domain; B3,B3 DNA binding domain;
IAA_ARF,Aux/IAA-ARF-dimeri,CUFF.36439.1
(2544 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043161 homologue to UniRef100_Q9FGV1 Cluster: Auxin r... 460 e-128
gnl|LJGI|FS338401 homologue to UniRef100_Q9FGV1 Cluster: Auxin r... 341 1e-92
gnl|LJGI|TC64953 homologue to UniRef100_Q6L8U1 Cluster: Auxin re... 194 2e-48
gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromos... 133 6e-30
gnl|LJGI|TC61640 similar to UniRef100_A7PTN8 Cluster: Chromosome... 121 2e-26
gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromos... 113 6e-24
gnl|LJGI|TC75592 similar to UniRef100_Q6L8U0 Cluster: Auxin resp... 92 2e-17
gnl|LJGI|TC63281 similar to UniRef100_A7PJQ8 Cluster: Chromosome... 84 5e-15
gnl|LJGI|TC70661 similar to UniRef100_Q6L8U0 Cluster: Auxin resp... 66 1e-09
>gnl|LJGI|BP043161 homologue to UniRef100_Q9FGV1 Cluster: Auxin response factor 8;
n=3; Arabidopsis thaliana|Rep: Auxin response factor 8 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 509
Score = 460 bits (232), Expect = e-128
Identities = 232/232 (100%)
Strand = Plus / Plus
Query: 1 atgaagctttcaacatcagggttgggtcagcagggacaagaaggaggggagaagaagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atgaagctttcaacatcagggttgggtcagcagggacaagaaggaggggagaagaagtgt 337
Query: 61 ctgaattctgagctatggcatgcatgcgcggggcccctggtgtccctaccaactgcgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctgaattctgagctatggcatgcatgcgcggggcccctggtgtccctaccaactgcgggg 397
Query: 121 actcgtgtggtttacttcccccagggtcatagtgagcaggtttctgccactactaacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 actcgtgtggtttacttcccccagggtcatagtgagcaggtttctgccactactaacaga 457
Query: 181 gaagttgatgggcacatgcccaattacccaagcttaccacctcaattgatct 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gaagttgatgggcacatgcccaattacccaagcttaccacctcaattgatct 509
>gnl|LJGI|FS338401 homologue to UniRef100_Q9FGV1 Cluster: Auxin response factor 8;
n=3; Arabidopsis thaliana|Rep: Auxin response factor 8 -
Arabidopsis thaliana (Mouse-ear cress), partial (10%)
Length = 709
Score = 341 bits (172), Expect = 1e-92
Identities = 238/260 (91%)
Strand = Plus / Plus
Query: 1 atgaagctttcaacatcagggttgggtcagcagggacaagaaggaggggagaagaagtgt 60
|||||||| |||||||||||| |||||||||||||||| ||||||||||||| |||||||
Sbjct: 450 atgaagctctcaacatcagggatgggtcagcagggacatgaaggaggggagaggaagtgt 509
Query: 61 ctgaattctgagctatggcatgcatgcgcggggcccctggtgtccctaccaactgcgggg 120
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||
Sbjct: 510 ttgaattctgagctatggcatgcatgcgcgggtcccttggtgtccctaccaactgcagga 569
Query: 121 actcgtgtggtttacttcccccagggtcatagtgagcaggtttctgccactactaacaga 180
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 570 actcgtgtggtttacttccctcagggtcatagtgagcaggtttctgccacaactaacaga 629
Query: 181 gaagttgatgggcacatgcccaattacccaagcttaccacctcaattgatctgccaactt 240
||| ||||||| ||||| ||||||||||| ||||| |||||||| |||| |||||||||
Sbjct: 630 gaaattgatggacacatacccaattacccgagcttgccacctcagctgatttgccaactt 689
Query: 241 cacaatgtcacaatgcatgc 260
|||||| | || ||||||||
Sbjct: 690 cacaatcttacgatgcatgc 709
>gnl|LJGI|TC64953 homologue to UniRef100_Q6L8U1 Cluster: Auxin response factor 3; n=1;
Cucumis sativus|Rep: Auxin response factor 3 - Cucumis
sativus (Cucumber), partial (26%)
Length = 713
Score = 194 bits (98), Expect = 2e-48
Identities = 332/410 (80%)
Strand = Plus / Plus
Query: 694 ccacaaactataatgccatcatcagttctatccagtgatagtatgcacattggacttctt 753
|||||| |||| ||||| ||||| || || || |||||||| |||||| | || ||||||
Sbjct: 201 ccacaacctatgatgccttcatcggtgctgtcaagtgatagcatgcacttggggcttctt 260
Query: 754 gcagctgctgcccatgctgcagcaactaatagctgttttaccgtgttctttaatccaagg 813
|| ||||| || ||||| || ||||| ||||| |||| ||| | |||| ||| || |
Sbjct: 261 gctgctgcagctcatgcagctgcaacaaatagtcgtttcaccattttctataacccgcgt 320
Query: 814 gctagtccatctgagtttgtcataccactttcaaaatatgtcaaagctgtgtaccatacg 873
|||| ||||| || ||||||||||| | | || ||||| ||||||||||| |||||
Sbjct: 321 actagcccatcagaatttgtcatacctttagcgaagtatgttaaagctgtgtatcatact 380
Query: 874 cgtatttctgttggtatgcgcttcaggatgctttttgagacagaagagtcaagtgtccga 933
|| |||| ||||||||||||||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 381 cgagtttcagttggtatgcgcttcaggatgctatttgaaacagaggaatctagtgtgcgg 440
Query: 934 aggtacatgggtacaataactggcataagcgatctggatactgttcggtggccgaattct 993
| || ||||| || |||||| |||| || || ||||| || |||||||| |||||
Sbjct: 441 cgatatatgggcacgataactagcattagtgacatggattcttcccggtggccaaattca 500
Query: 994 cattggcgctctgtcaaggttggttgggatgaatcaacagcaggagagagacagccacga 1053
||||||||||| ||||||||||| ||||||||||| |||||| | ||||| || || |||
Sbjct: 501 cattggcgctccgtcaaggttggctgggatgaatccacagcaagtgagaggcaacctcga 560
Query: 1054 gtgtcgttatgggaaattgagcctttaacaacatttccaatgtacccatc 1103
|| || |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 gtatctctatgggaaattgagccattaacaacatttccaatgtacccatc 610
>gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 545
Score = 133 bits (67), Expect = 6e-30
Identities = 345/440 (78%)
Strand = Plus / Plus
Query: 394 ttaaccgccagtgacaccagtacacatggagggttctctgttcctcgtcgtgcagctgag 453
||||| || ||||| ||||| || |||||||| || ||||||||||| | ||||||||
Sbjct: 77 ttaactgcaagtgataccagcactcatggaggattttctgttcctcgaagagcagctgaa 136
Query: 454 aaagttttccctcctctggatttctcccagcaaccacctgcacaagaactaattgctagg 513
||||| ||||||||||| |||| ||| ||||| || ||||| |||||||||||||| ||
Sbjct: 137 aaagtcttccctcctcttgattactcacagcagcctcctgctcaagaactaattgcgaga 196
Query: 514 gatctccatgatgttgaatggaagtttagacatatttttcggggacagccaaaacgacac 573
||||| |||| |||||||| || |||||||| || || || ||||| ||| | ||
Sbjct: 197 gatcttaatgacaacgaatggaaattcagacatatattccgaggtcagcctaaaaggcat 256
Query: 574 cttcttacaacaggctggagtatatttgttagcgccaagagactcgtagctggagattct 633
||||| || ||||| |||||| | ||||| || || || || || || || || |||||
Sbjct: 257 cttctgactacaggatggagtgtctttgtcagtgctaaaaggcttgttgccggtgattca 316
Query: 634 gtgcttttcatatggaatgagaagaatcagcnnnnnnngggaatacgtcgagccaaccgt 693
|| |||||||| |||||||| |||||||| | ||| || || ||||| || |||
Sbjct: 317 gtccttttcatctggaatgaaaagaatcaactactcttgggcattcgacgagcaaatcgt 376
Query: 694 ccacaaactataatgccatcatcagttctatccagtgatagtatgcacattggacttctt 753
| || || || ||||||||||| ||||| || |||||||| ||||||||||| ||||||
Sbjct: 377 tcgcagaccattatgccatcatcggttctgtcaagtgatagcatgcacattggccttctt 436
Query: 754 gcagctgctgcccatgctgcagcaactaatagctgttttaccgtgttctttaatccaagg 813
|| ||||| || ||||| || | || ||||| | |||||| | |||| |||||| |||
Sbjct: 437 gctgctgcagctcatgcagcttccacaaatagtcgctttaccatattctataatcctagg 496
Query: 814 gctagtccatctgagtttgt 833
|| || |||||||| |||||
Sbjct: 497 gcaagcccatctgaatttgt 516
>gnl|LJGI|TC61640 similar to UniRef100_A7PTN8 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 730
Score = 121 bits (61), Expect = 2e-26
Identities = 208/257 (80%)
Strand = Plus / Plus
Query: 40 gaaggaggggagaagaagtgtctgaattctgagctatggcatgcatgcgcggggcccctg 99
|||| |||||||||||| ||| |||||||||| || ||||||||||| || || || |||
Sbjct: 455 gaagaaggggagaagaaatgtttgaattctgaactttggcatgcatgtgctggccctctg 514
Query: 100 gtgtccctaccaactgcggggactcgtgtggtttacttcccccagggtcatagtgagcag 159
|| ||||| || | || | ||||| || ||||| ||||| ||||| |||||||||
Sbjct: 515 gtttccctgcctcccattggaagccgtgtagtctactttccccaaggtcacagtgagcag 574
Query: 160 gtttctgccactactaacagagaagttgatgggcacatgcccaattacccaagcttacca 219
||| |||| | |||||||| ||||| |||| || || || |||||||| | ||| ||
Sbjct: 575 gttgctgcttcaactaacagggaagtagatgcacatattcctaattaccccaacttgccg 634
Query: 220 cctcaattgatctgccaacttcacaatgtcacaatgcatgcagatgttgaaacagatgaa 279
|| || | ||||| ||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 635 ccacagcttatctgtcaacttcacaatgaaacaatgcatgcagatgctgaaacagatgaa 694
Query: 280 gtgtatgctcaaatgac 296
|| ||||||||||||||
Sbjct: 695 gtttatgctcaaatgac 711
>gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 435
Score = 113 bits (57), Expect = 6e-24
Identities = 246/309 (79%)
Strand = Plus / Plus
Query: 208 ccaagcttaccacctcaattgatctgccaacttcacaatgtcacaatgcatgcagatgtt 267
||||||||||| |||||| |||| || |||||||| ||||| || |||||||| |||| |
Sbjct: 114 ccaagcttacctcctcaactgatttgtcaacttcataatgtgactatgcatgctgatgct 173
Query: 268 gaaacagatgaagtgtatgctcaaatgacactgcagccgttgactccggaagagcaaaag 327
|| || |||||||| |||||||| ||||| |||| || ||| ||| |||||||||||
Sbjct: 174 gagactgatgaagtttatgctcagatgaccttgcaacctctgaatcctcaagagcaaaag 233
Query: 328 gatacatttcttcctatggaattgggccttccaagtaagcagccttcgaattatttttgc 387
|| ||| ||||| || |||||| ||| ||||| ||||| | || ||||| |||
Sbjct: 234 gaagcataccttccagcagagttgggcactcccagtaaacagccaacaaactatttctgc 293
Query: 388 aagactttaaccgccagtgacaccagtacacatggagggttctctgttcctcgtcgtgca 447
|||||||| || || |||||||| || || ||||| || |||||||| ||||| || |||
Sbjct: 294 aagactttgactgctagtgacacaagcactcatgggggattctctgtgcctcgccgggca 353
Query: 448 gctgagaaagttttccctcctctggatttctcccagcaaccacctgcacaagaactaatt 507
||||| ||||| || ||||| |||| |||||||| || || ||||| || || ||||||
Sbjct: 354 gctgaaaaagtgtttcctccattggacttctcccaacagcctcctgctcaggagctaatt 413
Query: 508 gctagggat 516
|| ||||||
Sbjct: 414 gcaagggat 422
>gnl|LJGI|TC75592 similar to UniRef100_Q6L8U0 Cluster: Auxin response factor 4; n=1;
Cucumis sativus|Rep: Auxin response factor 4 - Cucumis
sativus (Cucumber), partial (13%)
Length = 633
Score = 91.7 bits (46), Expect = 2e-17
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 2276 agttggaagaccctcttagatcaggctggcagcttgtattcgtcgacagggagagtgacg 2335
||||||| |||||| | |||||||||||||||||||||||||| ||| | ||||||||||
Sbjct: 30 agttggaggaccctgtgagatcaggctggcagcttgtattcgttgaccgagagagtgacg 89
Query: 2336 ttcttctcct 2345
||||||||||
Sbjct: 90 ttcttctcct 99
>gnl|LJGI|TC63281 similar to UniRef100_A7PJQ8 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 781
Score = 83.8 bits (42), Expect = 5e-15
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 2288 ctcttagatcaggctggcagcttgtattcgtcgacagggagagtgacgttcttctccttg 2347
|||| ||||||||||||||||||||||| || |||||||||| |||| ||||||| ||||
Sbjct: 126 ctctgagatcaggctggcagcttgtatttgttgacagggagaatgacattcttcttcttg 185
Query: 2348 gagacgatccctgg 2361
| || |||||||||
Sbjct: 186 gtgatgatccctgg 199
>gnl|LJGI|TC70661 similar to UniRef100_Q6L8U0 Cluster: Auxin response factor 4; n=1;
Cucumis sativus|Rep: Auxin response factor 4 - Cucumis
sativus (Cucumber), partial (11%)
Length = 534
Score = 65.9 bits (33), Expect = 1e-09
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 2301 ctggcagcttgtattcgtcgacagggagagtgacgttcttctcct 2345
|||||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 1 ctggcagcttgtattcgttgaccgagagagtgacgttcttctcct 45