Miyakogusa Predicted Gene

Lj2g3v1182650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1182650.1 Non Chatacterized Hit- tr|F0ZE43|F0ZE43_DICPU
Putative uncharacterized protein OS=Dictyostelium
purp,36.69,0.0000000000004,Nucleic acid-binding proteins,Nucleic
acid-binding, OB-fold-like; no description,Nucleic
acid-bindin,CUFF.36384.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g23590.1                                                       247   3e-66
Glyma01g22580.1                                                       247   3e-66
Glyma11g00470.1                                                        89   1e-18

>Glyma18g23590.1 
          Length = 139

 Score =  247 bits (630), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 112/135 (82%), Positives = 125/135 (92%)

Query: 1   MILLKDIVPAAQNNIDTKFIVLEKGMTTLEGQNKVCLALVADETAAVHFQLWGDECDVFD 60
           MILLKDIVPAAQNNIDTKFI+L+KG TT+EGQNK+CLALVAD TAA+HFQ WGDECD FD
Sbjct: 1   MILLKDIVPAAQNNIDTKFIILDKGKTTVEGQNKICLALVADATAAIHFQFWGDECDAFD 60

Query: 61  LGDIICLTNGIFSYQRNNLLLRAGKRGKLVKIGEFTMSYVETPNMSEIHWIPDPNNSRTY 120
            GDIICLTNGIFSYQ  NL+LRAGKRGKLVK+G FTM++VETPNMSEIHWIPDPNNS+ Y
Sbjct: 61  SGDIICLTNGIFSYQHGNLILRAGKRGKLVKVGGFTMAFVETPNMSEIHWIPDPNNSKNY 120

Query: 121 IQEHVVSPHSRIFPP 135
           IQ++V+SP SRIFPP
Sbjct: 121 IQQYVISPVSRIFPP 135


>Glyma01g22580.1 
          Length = 139

 Score =  247 bits (630), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 112/135 (82%), Positives = 125/135 (92%)

Query: 1   MILLKDIVPAAQNNIDTKFIVLEKGMTTLEGQNKVCLALVADETAAVHFQLWGDECDVFD 60
           MILLKDIVPAAQNNIDTKFI+L+KG TT+EGQNK+CLALVAD TAA+HFQ WGDECD FD
Sbjct: 1   MILLKDIVPAAQNNIDTKFIILDKGKTTVEGQNKICLALVADATAAIHFQFWGDECDAFD 60

Query: 61  LGDIICLTNGIFSYQRNNLLLRAGKRGKLVKIGEFTMSYVETPNMSEIHWIPDPNNSRTY 120
            GDIICLTNGIFSYQ  NL+LRAGKRGKLVK+G FTM++VETPNMSEIHWIPDPNNS+ Y
Sbjct: 61  SGDIICLTNGIFSYQHGNLILRAGKRGKLVKVGGFTMAFVETPNMSEIHWIPDPNNSKNY 120

Query: 121 IQEHVVSPHSRIFPP 135
           IQ++V+SP SRIFPP
Sbjct: 121 IQQYVISPVSRIFPP 135


>Glyma11g00470.1 
          Length = 73

 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 5/65 (7%)

Query: 53  GDECDVFDLGDIICLTNGIFSYQRNNLLLRAGKRGKLVKIGEFTMSYVETPNMSEIHWIP 112
           GDECD F   DIICLTNGIFS+Q  NL+LR  +       GEF++S+VETPN+SEIHWIP
Sbjct: 7   GDECDAFHSADIICLTNGIFSFQHGNLVLRQEREA-----GEFSVSFVETPNISEIHWIP 61

Query: 113 DPNNS 117
           + NNS
Sbjct: 62  NSNNS 66