Miyakogusa Predicted Gene
- Lj2g3v1155540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1155540.1 tr|Q9SQI8|Q9SQI8_ARATH 2-oxoacid dehydrogenases
acyltransferase family protein OS=Arabidopsis
thalia,75.37,0,2-oxoacid_dh,2-oxoacid dehydrogenase acyltransferase,
catalytic domain; Biotin_lipoyl,Biotin/lipoyl ,CUFF.36348.1
(464 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g111140.1 | 2-oxoacid dehydrogenase acyltransferase family... 568 e-162
Medtr1g096240.1 | 2-oxoacid dehydrogenase acyltransferase family... 482 e-136
Medtr8g018770.1 | long form dihydrolipoamide acetyltransferase |... 152 8e-37
Medtr1g091037.1 | long form dihydrolipoamide acetyltransferase |... 144 2e-34
Medtr1g091037.2 | long form dihydrolipoamide acetyltransferase |... 144 2e-34
Medtr2g006820.1 | 2-oxoacid dehydrogenase acyltransferase family... 85 2e-16
Medtr5g093300.1 | 2-oxoacid dehydrogenase acyltransferase family... 84 3e-16
Medtr4g120220.1 | 2-oxoacid dehydrogenase acyltransferase family... 79 7e-15
>Medtr1g111140.1 | 2-oxoacid dehydrogenase acyltransferase family
protein | HC | chr1:50194256-50200333 | 20130731
Length = 470
Score = 568 bits (1464), Expect = e-162, Method: Compositional matrix adjust.
Identities = 300/438 (68%), Positives = 316/438 (72%), Gaps = 13/438 (2%)
Query: 40 SKPRRRP-SQSVQSKIREIFMPALSSTMTEGKIVSWVKSEGDVLSKGDSVVVVESDKADM 98
S PRR+ S +Q+KIREIFMPALSSTMTEGKIVSW+KSEGD LSKGDSVVVVESDKADM
Sbjct: 33 SSPRRKSFSFKIQAKIREIFMPALSSTMTEGKIVSWIKSEGDTLSKGDSVVVVESDKADM 92
Query: 99 DVETFYDGILAAIVVNEGQTAPVGAPIGLLAETXXXXXXXXXXXXXXXXXXX------XX 152
DVETFYDGILAAIVV+EG+TAPVGAPIGLLAET
Sbjct: 93 DVETFYDGILAAIVVDEGETAPVGAPIGLLAETAEDIAEAQAQAKSVKSASSSSSSPPQE 152
Query: 153 XXXXXXXXXXXXXXXXXXDGPRKTVATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVEX 212
DGP+K ATP AKKLAKQHKVDI SV GTGP GRITPADVE
Sbjct: 153 TSQSPPPPPPPAAVKSVSDGPKKITATPQAKKLAKQHKVDIASVNGTGPFGRITPADVEA 212
Query: 213 XXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXFTTMQSAVAKNMLESLSVP 266
FTTMQSAVAKNM+ESLSVP
Sbjct: 213 AAGITPVKSNVAPVATPTPVAPKGGSSAAAPAAIPGSSNVAFTTMQSAVAKNMMESLSVP 272
Query: 267 TFRVGYPVTTDALDALYAKVKLKGVXXXXXXXXXXXXXXXQHPVVNASCKDGKSFTYNSS 326
TFRVGYPV TDALDA Y KVK KGV QHPVVNA+CKDGK+F YNS+
Sbjct: 273 TFRVGYPVITDALDAFYEKVKPKGVTMTAILAKAVAMALVQHPVVNATCKDGKNFHYNSN 332
Query: 327 INIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVDKARSKQLQPHEYNSGTFTLSNL 386
IN+AVAVAINGGLITPVLQ+ADKLDLYLLSQKWKELV KARSKQLQP+EYNSGTFTLSNL
Sbjct: 333 INVAVAVAINGGLITPVLQNADKLDLYLLSQKWKELVGKARSKQLQPNEYNSGTFTLSNL 392
Query: 387 GMFGVDRFDAILPPGQGAIMAVGASKPTVLADKDGFFSVKNKMLVNVTADHRIIYGADLA 446
GMFGVDRFDAILPPGQGAIMAVGASKPTVLAD DGFF VK+KMLVNVTADHRIIYGADLA
Sbjct: 393 GMFGVDRFDAILPPGQGAIMAVGASKPTVLADADGFFRVKSKMLVNVTADHRIIYGADLA 452
Query: 447 AFLQTFTKIIENPESLTL 464
AFLQTF+KIIENPESLTL
Sbjct: 453 AFLQTFSKIIENPESLTL 470
>Medtr1g096240.1 | 2-oxoacid dehydrogenase acyltransferase family
protein | HC | chr1:43327224-43331625 | 20130731
Length = 457
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/433 (58%), Positives = 291/433 (67%), Gaps = 25/433 (5%)
Query: 50 VQSKIREIFMPALSSTMTEGKIVSWVKSEGDVLSKGDSVVVVESDKADMDVETFYDGILA 109
V++KIREIFMPALSSTMTEGKIVSW+KSEGD LSKGDSVVVVESDKADMDVETFYDGILA
Sbjct: 32 VRAKIREIFMPALSSTMTEGKIVSWIKSEGDKLSKGDSVVVVESDKADMDVETFYDGILA 91
Query: 110 AIVVNEGQTAPVGAPIGLLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 169
AIVV EG A VG+PI LAET
Sbjct: 92 AIVVEEGDVAAVGSPIAFLAETEEEIELAKAKALSSSSSSSTSPSPAPSPAPAPTPAPVE 151
Query: 170 XDGPRKTV------------------ATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVE 211
P+K V A+PYAKKLAK+ KV++G ++GTGP+GR+ DVE
Sbjct: 152 SQ-PKKVVTAAVVSKHPASEGGKRVVASPYAKKLAKELKVELGQIIGTGPSGRVVAKDVE 210
Query: 212 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTTMQSAVAKNMLESLSVPTFRVG 271
FTTMQ+AV++NM+ESL VP FRVG
Sbjct: 211 ------AFAAIGSVAATATEPVNTAVSGVELGTVVPFTTMQNAVSRNMVESLGVPAFRVG 264
Query: 272 YPVTTDALDALYAKVKLKGVXXXXXXXXXXXXXXXQHPVVNASCKDGKSFTYNSSINIAV 331
Y +TTDALDALY K+K KGV +HPV+N+SC+DG SFTYNSSINIAV
Sbjct: 265 YTITTDALDALYKKIKSKGVTMTALLAKATALALAKHPVINSSCRDGNSFTYNSSINIAV 324
Query: 332 AVAINGGLITPVLQDADKLDLYLLSQKWKELVDKARSKQLQPHEYNSGTFTLSNLGMFGV 391
AVAI+GGLITPVLQDADK+D+Y LS+KWKELVDKAR+KQLQPHEY +GTFTLSNLGMFGV
Sbjct: 325 AVAIDGGLITPVLQDADKVDVYSLSRKWKELVDKARAKQLQPHEYTTGTFTLSNLGMFGV 384
Query: 392 DRFDAILPPGQGAIMAVGASKPTVLADKDGFFSVKNKMLVNVTADHRIIYGADLAAFLQT 451
DRFDAILPPG GAIMAVG S+PTV+A KDG +KN+M VNVTADHR+IYG+DLA FLQT
Sbjct: 385 DRFDAILPPGTGAIMAVGTSQPTVVATKDGRIGMKNQMQVNVTADHRVIYGSDLALFLQT 444
Query: 452 FTKIIENPESLTL 464
++IIE+P+ LT
Sbjct: 445 LSQIIEDPKDLTF 457
>Medtr8g018770.1 | long form dihydrolipoamide acetyltransferase | HC
| chr8:6482780-6490400 | 20130731
Length = 543
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 189/435 (43%), Gaps = 31/435 (7%)
Query: 55 REIFMPALSSTMTEGKIVSWVKSEGDVLSKGDSVVVVESDKADMDVETFYDGILAAIVVN 114
+EI MP+LS TMTEG I W+K EGD +S G+ + VE+DKA +++E +G LA IV
Sbjct: 115 QEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGFLAKIVRK 174
Query: 115 EGQTA-PVGAPIGL-LAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDG 172
EG+ VG I + + E
Sbjct: 175 EGEKEIQVGEVIAITVEEEADIAKFKDYQPSASESSAPPAKETPAPPPPKKEVAEEPARE 234
Query: 173 PRKTVATP--------------YAKKLAKQHKVDIGSVVGTGPNGRITPADVEXXXXXXX 218
P V+ P A+KLA++ V++ S+ GTGP+G I D++
Sbjct: 235 PEPKVSKPSAPPSSGDRIFASPLARKLAEEKNVNLSSIKGTGPDGLIVKGDIDDYLASGA 294
Query: 219 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTTMQSAVAKNMLESLSVPTFRVGYPVTTDA 278
T ++ +L ++P + + D
Sbjct: 295 KEVSAPSKAKPAADAALDYTDIPVSQIRKIT-----ASRLLLSKQTIPHYYLTVDTCVDK 349
Query: 279 LDALYAKVKL-------KGVXXXXXXXXXXXXXXXQHPVVNASCKDGKSFTYNSSINIAV 331
L +L ++ + + P N+S + Y+ ++NI V
Sbjct: 350 LMSLRTQLNSLQEASGGARISVNDLVIKAAALALRKVPQCNSSWTNDYIRQYH-NVNINV 408
Query: 332 AVAINGGLITPVLQDADKLDLYLLSQKWKELVDKARSKQLQPHEYNSGTFTLSNL-GMFG 390
AV + GL PV++DADK L + ++ K+L KA+ L+P +Y GTFT+SNL G FG
Sbjct: 409 AVQTDHGLFVPVVRDADKKGLSTIGEEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFG 468
Query: 391 VDRFDAILPPGQGAIMAVGASKPTVLADKDG-FFSVKNKMLVNVTADHRIIYGADLAAFL 449
V +F AI+ P Q I+AVG+++ V+ F + + V ++ DHR+I GA A +L
Sbjct: 469 VKQFCAIVNPPQSGILAVGSAERRVVPGSGAEEFKFASFIAVTLSCDHRVIDGAIGAEWL 528
Query: 450 QTFTKIIENPESLTL 464
+ F IENPE++ L
Sbjct: 529 KAFKGYIENPETMLL 543
>Medtr1g091037.1 | long form dihydrolipoamide acetyltransferase | HC
| chr1:41162111-41173260 | 20130731
Length = 625
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 172/415 (41%), Gaps = 27/415 (6%)
Query: 59 MPALSSTMTEGKIVSWVKSEGDVLSKGDSVVVVESDKADMDVETFYDGILAAIVVNEG-Q 117
MPALS TM +G I W K EGD + GD + +E+DKA ++ E+ +G LA IV EG +
Sbjct: 205 MPALSPTMNQGNIAKWNKKEGDKIEVGDILCEIETDKATLEFESLEEGYLAKIVAPEGSK 264
Query: 118 TAPVGAPIGLLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPRKTV 177
VG PI + E
Sbjct: 265 EVAVGQPIAITVEDASDIEAVKNSISSSSVNQKEKTTQHDTKSEVKTKKTNTAR------ 318
Query: 178 ATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVEXXXXXXXXXXXXXXXXXXXXXXXXXX 237
+P AK L ++ +D ++ TGP+G + DV
Sbjct: 319 ISPAAKLLILEYGLDASTLNATGPHGTLLKGDVLSAIKSGKLSSKPASSKEKASSSQSHQ 378
Query: 238 XXXXXXXXXXF-----------TTMQSAVAKNMLES-LSVPTFRVGYPVTTDALDALYAK 285
+ ++ +AK +LES + P + VT D L +L
Sbjct: 379 VAASQESKSGLKQSDTYEDFPNSQIRKVIAKRLLESKQNTPHLYLSSDVTLDPLLSLRKD 438
Query: 286 VKLK---GVXXXXXXXXXXXXXXXQHPVVNASCKDGK-SFTYNSSINIAVAVAINGGLIT 341
+K + V P NA D K S++I++AVA GL+T
Sbjct: 439 LKEQYDVKVSVNDIIIKVVAAALRNVPEANAYWNDEKGEVILCDSVDISIAVATEKGLMT 498
Query: 342 PVLQDADKLDLYLLSQKWKELVDKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPG 401
P+L++AD + +S + KEL KAR +L+P E+ GTF++SNLGM+ VD+F AI+ P
Sbjct: 499 PILKNADHKTISAISSEVKELAAKAREGKLKPQEFQGGTFSISNLGMYPVDKFCAIINPP 558
Query: 402 QGAIMAVGASKPTVLA--DKDGFF--SVKNKMLVNVTADHRIIYGADLAAFLQTF 452
Q I+AVG V A DG SV K+ + ++ADHR+ G AFL
Sbjct: 559 QACILAVGRGNKVVEAVIGADGIEKPSVATKLNLTLSADHRVFDGKVGGAFLSAL 613
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 59 MPALSSTMTEGKIVSWVKSEGDVLSKGDSVVVVESDKADMDVETFYDGILAAIVVNEG-Q 117
MPALS TMT+G I W K EGD ++ GD + +E+DKA ++ E+ +G LA I+V +G +
Sbjct: 79 MPALSPTMTQGNIAKWRKKEGDKIAVGDILCEIETDKATLEFESLEEGFLAKILVPDGSK 138
Query: 118 TAPVGAPIGLLAE 130
PVG PI + E
Sbjct: 139 DVPVGQPIAITVE 151
>Medtr1g091037.2 | long form dihydrolipoamide acetyltransferase | HC
| chr1:41162201-41172852 | 20130731
Length = 633
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 172/415 (41%), Gaps = 27/415 (6%)
Query: 59 MPALSSTMTEGKIVSWVKSEGDVLSKGDSVVVVESDKADMDVETFYDGILAAIVVNEG-Q 117
MPALS TM +G I W K EGD + GD + +E+DKA ++ E+ +G LA IV EG +
Sbjct: 213 MPALSPTMNQGNIAKWNKKEGDKIEVGDILCEIETDKATLEFESLEEGYLAKIVAPEGSK 272
Query: 118 TAPVGAPIGLLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPRKTV 177
VG PI + E
Sbjct: 273 EVAVGQPIAITVEDASDIEAVKNSISSSSVNQKEKTTQHDTKSEVKTKKTNTAR------ 326
Query: 178 ATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVEXXXXXXXXXXXXXXXXXXXXXXXXXX 237
+P AK L ++ +D ++ TGP+G + DV
Sbjct: 327 ISPAAKLLILEYGLDASTLNATGPHGTLLKGDVLSAIKSGKLSSKPASSKEKASSSQSHQ 386
Query: 238 XXXXXXXXXXF-----------TTMQSAVAKNMLES-LSVPTFRVGYPVTTDALDALYAK 285
+ ++ +AK +LES + P + VT D L +L
Sbjct: 387 VAASQESKSGLKQSDTYEDFPNSQIRKVIAKRLLESKQNTPHLYLSSDVTLDPLLSLRKD 446
Query: 286 VKLK---GVXXXXXXXXXXXXXXXQHPVVNASCKDGK-SFTYNSSINIAVAVAINGGLIT 341
+K + V P NA D K S++I++AVA GL+T
Sbjct: 447 LKEQYDVKVSVNDIIIKVVAAALRNVPEANAYWNDEKGEVILCDSVDISIAVATEKGLMT 506
Query: 342 PVLQDADKLDLYLLSQKWKELVDKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPG 401
P+L++AD + +S + KEL KAR +L+P E+ GTF++SNLGM+ VD+F AI+ P
Sbjct: 507 PILKNADHKTISAISSEVKELAAKAREGKLKPQEFQGGTFSISNLGMYPVDKFCAIINPP 566
Query: 402 QGAIMAVGASKPTVLA--DKDGFF--SVKNKMLVNVTADHRIIYGADLAAFLQTF 452
Q I+AVG V A DG SV K+ + ++ADHR+ G AFL
Sbjct: 567 QACILAVGRGNKVVEAVIGADGIEKPSVATKLNLTLSADHRVFDGKVGGAFLSAL 621
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 59 MPALSSTMTEGKIVSWVKSEGDVLSKGDSVVVVESDKADMDVETFYDGILAAIVVNEG-Q 117
MPALS TMT+G I W K EGD ++ GD + +E+DKA ++ E+ +G LA I+V +G +
Sbjct: 87 MPALSPTMTQGNIAKWRKKEGDKIAVGDILCEIETDKATLEFESLEEGFLAKILVPDGSK 146
Query: 118 TAPVGAPIGLLAE 130
PVG PI + E
Sbjct: 147 DVPVGQPIAITVE 159
>Medtr2g006820.1 | 2-oxoacid dehydrogenase acyltransferase family
protein | HC | chr2:627266-619028 | 20130731
Length = 453
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 308 HPVVNASCKDGKSFTYNSSINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVDKAR 367
P+VNA DG Y I+I++AV GL+ PV++DADK++ + ++ KA
Sbjct: 297 QPIVNAVI-DGDDIIYRDYIDISIAVGTPKGLVVPVIRDADKMNFADIEKQINVFAKKAN 355
Query: 368 SKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGA--SKPTVLADKDGFFSV 425
+ L E GT T+SN G++G I+ P Q AI+ + + S+P V+ G
Sbjct: 356 AGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPAVVG---GNVVP 412
Query: 426 KNKMLVNVTADHRIIYGADLAAFLQTFTKIIENPESLTL 464
+ M + +T DHRII G + FL+ +E+P L L
Sbjct: 413 RPLMYIALTYDHRIIDGREAVFFLRRIKDTVEDPRRLLL 451
>Medtr5g093300.1 | 2-oxoacid dehydrogenase acyltransferase family
protein | HC | chr5:40730390-40737631 | 20130731
Length = 455
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 308 HPVVNASCKDGKSFTYNSSINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVDKAR 367
P+VNA DG Y I+I++AV GL+ PV++DADK++ + ++ KA
Sbjct: 299 QPIVNAVI-DGDDIIYRDYIDISIAVGTPKGLVVPVIRDADKMNFADIEKQINIFAKKAN 357
Query: 368 SKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGA--SKPTVLADKDGFFSV 425
+ L E GT T+SN G++G I+ P Q AI+ + + S+P V+ G
Sbjct: 358 AGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPAVVG---GNVVP 414
Query: 426 KNKMLVNVTADHRIIYGADLAAFLQTFTKIIENPESLTL 464
+ M + +T DHRII G + FL+ +E+P L L
Sbjct: 415 RPLMYIALTYDHRIIDGREAVFFLRRIKDTVEDPRRLLL 453
>Medtr4g120220.1 | 2-oxoacid dehydrogenase acyltransferase family
protein | HC | chr4:49823102-49827309 | 20130731
Length = 520
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 13/224 (5%)
Query: 251 MQSAVAKNMLESLSVPTFRVGYPVTTDALDAL---------YAKVKLKGVXXXXXXXXXX 301
Q A+ K+M + VP F + DAL L Y VK +
Sbjct: 297 FQRAMVKSMSLAAKVPHFHYVDELNCDALVELKTSFQKNNPYTDVKHTFLPILIKSLSMA 356
Query: 302 XXXXXQHPVVNASCK-DGKSFTYNSSINIAVAVAINGGLITPVLQDADKLDLYLLSQKWK 360
++P VN+ K D S NI +A+A GL+ P +++ L + ++++
Sbjct: 357 LI---KYPSVNSCFKEDAFEVILKGSHNIGIAMATPHGLVVPNIKNVQSLSILEITKELA 413
Query: 361 ELVDKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVLADKD 420
L A +L + SGT TLSN+G G +L + AI+A+G + D
Sbjct: 414 RLQQLASDNKLSSEDICSGTITLSNIGAIGGKFGSPLLNLPEVAIIAMGRIQKVPRFTDD 473
Query: 421 GFFSVKNKMLVNVTADHRIIYGADLAAFLQTFTKIIENPESLTL 464
G + M VN+ ADHR++ GA +A F + K+IENPE L L
Sbjct: 474 GNVYPASLMTVNIGADHRVLDGATVARFCNEWKKLIENPELLVL 517