Miyakogusa Predicted Gene

Lj2g3v1142960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1142960.1 Non Characterized Hit- tr|C5Y1H7|C5Y1H7_SORBI
Putative uncharacterized protein Sb04g032770
OS=Sorghu,43.43,2e-18,4HBT_2,NULL; seg,NULL; FAMILY NOT NAMED,NULL;
Thioesterase/thiol ester dehydrase-isomerase,NULL; no ,CUFF.36311.1
         (212 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g056390.1 | pollen thioesterase | HC | chr5:23220063-23224...   315   1e-86
Medtr5g056230.1 | pollen thioesterase | HC | chr5:23171809-23178...   243   8e-65
Medtr5g056390.2 | pollen thioesterase | HC | chr5:23220063-23224...   180   7e-46
Medtr5g056300.1 | thioesterase-like protein, putative | LC | chr...    83   2e-16

>Medtr5g056390.1 | pollen thioesterase | HC | chr5:23220063-23224362
           | 20130731
          Length = 212

 Score =  315 bits (808), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/212 (74%), Positives = 168/212 (79%)

Query: 1   MLHTFPFPCSIHASMAALSSQLFHNTTSLHLTXXXXXXXXXXXXXXXXLLRSILPVNAGN 60
           MLH F F CS HAS     S L  NTTS HL                  LRS+  V A +
Sbjct: 1   MLHPFSFRCSNHASTTPFPSLLLLNTTSFHLAGKSPTFPFLRRPFNPPALRSVHHVRAVS 60

Query: 61  SLPLFDFSGGKGMSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDA 120
           SLPLFDFSGGKGMSGF DVELKVRDYELD FGVVNN+VYA YCQHGRHE LE IGINCDA
Sbjct: 61  SLPLFDFSGGKGMSGFCDVELKVRDYELDQFGVVNNSVYAGYCQHGRHEFLESIGINCDA 120

Query: 121 VARSGNALALTELSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVLEAK 180
           VAR G+ALAL+ELS KFL+PLRSGD+FVVKVR+SGSSAAR+YFDHFIYKL NQEP+LEAK
Sbjct: 121 VARCGDALALSELSFKFLAPLRSGDRFVVKVRVSGSSAARIYFDHFIYKLPNQEPILEAK 180

Query: 181 ATAVWLDKNYRPIRIPADMKSKIVKFIRNEDS 212
           ATAVWLDKNYRPIRIPAD+KSK VKFIRNEDS
Sbjct: 181 ATAVWLDKNYRPIRIPADIKSKFVKFIRNEDS 212


>Medtr5g056230.1 | pollen thioesterase | HC | chr5:23171809-23178336
           | 20130731
          Length = 212

 Score =  243 bits (620), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 127/212 (59%), Positives = 145/212 (68%)

Query: 1   MLHTFPFPCSIHASMAALSSQLFHNTTSLHLTXXXXXXXXXXXXXXXXLLRSILPVNAGN 60
           MLH F FPCS  AS    +S    +TTS HL+                 LRSILP +  +
Sbjct: 1   MLHLFSFPCSNPASTTTFTSPFLLHTTSSHLSGKSPTSPFSRRSFNPPALRSILPASTSS 60

Query: 61  SLPLFDFSGGKGMSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDA 120
           SL LFD +  K M  F DVELKVRDYE+D +GVVNNAVYA+YCQH   E  + IGIN   
Sbjct: 61  SLQLFDVNESKSMCEFYDVELKVRDYEVDRYGVVNNAVYANYCQHCGDEFFKSIGINFAD 120

Query: 121 VARSGNALALTELSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEPVLEAK 180
           V RSG+A+AL+ LSLKFL+PLRSGDKFVV+VRISG SAARLY D FIYKL N +PVLEAK
Sbjct: 121 VIRSGDAMALSNLSLKFLAPLRSGDKFVVRVRISGISAARLYLDQFIYKLPNHKPVLEAK 180

Query: 181 ATAVWLDKNYRPIRIPADMKSKIVKFIRNEDS 212
            T V LDKNYRP+RI  DMKSKI K I  +DS
Sbjct: 181 TTVVRLDKNYRPLRISEDMKSKIFKCIGGDDS 212


>Medtr5g056390.2 | pollen thioesterase | HC | chr5:23220063-23224362
           | 20130731
          Length = 159

 Score =  180 bits (457), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 94/142 (66%), Positives = 100/142 (70%)

Query: 1   MLHTFPFPCSIHASMAALSSQLFHNTTSLHLTXXXXXXXXXXXXXXXXLLRSILPVNAGN 60
           MLH F F CS HAS     S L  NTTS HL                  LRS+  V A +
Sbjct: 1   MLHPFSFRCSNHASTTPFPSLLLLNTTSFHLAGKSPTFPFLRRPFNPPALRSVHHVRAVS 60

Query: 61  SLPLFDFSGGKGMSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDA 120
           SLPLFDFSGGKGMSGF DVELKVRDYELD FGVVNN+VYA YCQHGRHE LE IGINCDA
Sbjct: 61  SLPLFDFSGGKGMSGFCDVELKVRDYELDQFGVVNNSVYAGYCQHGRHEFLESIGINCDA 120

Query: 121 VARSGNALALTELSLKFLSPLR 142
           VAR G+ALAL+ELS KFL+PLR
Sbjct: 121 VARCGDALALSELSFKFLAPLR 142


>Medtr5g056300.1 | thioesterase-like protein, putative | LC |
           chr5:23191934-23192408 | 20130731
          Length = 74

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 3/66 (4%)

Query: 85  DYELDHFGVVNNAVYASYCQHGRHELLEGIGINCDAV-ARSGNALALTELSLKFLSPLR- 142
           DYELD +GVV+N+ YA YCQ GRHE L+ IGINCD + A SG+A A++ELSLKF+ PLR 
Sbjct: 5   DYELDQYGVVHNS-YACYCQQGRHEFLKSIGINCDDILAASGDAFAISELSLKFIGPLRV 63

Query: 143 SGDKFV 148
           S  KFV
Sbjct: 64  SHAKFV 69