Miyakogusa Predicted Gene

Lj2g3v1142960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1142960.1 Non Chatacterized Hit- tr|C5Y1H7|C5Y1H7_SORBI
Putative uncharacterized protein Sb04g032770
OS=Sorghu,43.43,2e-18,4HBT_2,NULL; seg,NULL; FAMILY NOT NAMED,NULL;
Thioesterase/thiol ester dehydrase-isomerase,NULL; no ,CUFF.36311.1
         (212 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68260.1 | Symbols:  | Thioesterase superfamily protein | chr...   249   9e-67
AT1G68280.1 | Symbols:  | Thioesterase superfamily protein | chr...   225   1e-59
AT1G35290.1 | Symbols:  | Thioesterase superfamily protein | chr...   217   5e-57
AT1G35250.1 | Symbols:  | Thioesterase superfamily protein | chr...   205   2e-53

>AT1G68260.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:25585976-25587601 REVERSE LENGTH=190
          Length = 190

 Score =  249 bits (636), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 114/157 (72%), Positives = 131/157 (83%)

Query: 56  VNAGNSLPLFDFSGGKGMSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHELLEGIG 115
           V     L  FD  GGKGMS F +VELKVRDYELD FGVVNNAVYA+YCQHGRHE LE IG
Sbjct: 33  VKTFKPLAFFDLKGGKGMSEFHEVELKVRDYELDQFGVVNNAVYANYCQHGRHEFLESIG 92

Query: 116 INCDAVARSGNALALTELSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYKLHNQEP 175
           INCD VARSG ALA++EL++KFLSPLRSGDKFVVK RISG+SAAR+YFDHFI+KL NQEP
Sbjct: 93  INCDEVARSGEALAISELTMKFLSPLRSGDKFVVKARISGTSAARIYFDHFIFKLPNQEP 152

Query: 176 VLEAKATAVWLDKNYRPIRIPADMKSKIVKFIRNEDS 212
           +LEAK  AVWLD  YRP+RIP+ ++SK V F+R +D+
Sbjct: 153 ILEAKGIAVWLDNKYRPVRIPSSIRSKFVHFLRQDDA 189


>AT1G68280.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:25592467-25593595 REVERSE LENGTH=188
          Length = 188

 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 106/163 (65%), Positives = 127/163 (77%), Gaps = 3/163 (1%)

Query: 53  ILPVNAGNSLP---LFDFSGGKGMSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHE 109
           +LP+ +  +       D  GGK MS F +VELKVRDYELD FGVVNNAVYA+YCQHG HE
Sbjct: 25  MLPLRSAKTFKPHTFLDLKGGKEMSEFHEVELKVRDYELDQFGVVNNAVYANYCQHGMHE 84

Query: 110 LLEGIGINCDAVARSGNALALTELSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYK 169
            LE IGINCD VARSG ALA++EL++ FL+PLRSGDKFVVKV IS +SAAR+YFDH I K
Sbjct: 85  FLESIGINCDEVARSGEALAISELTMNFLAPLRSGDKFVVKVNISRTSAARIYFDHSILK 144

Query: 170 LHNQEPVLEAKATAVWLDKNYRPIRIPADMKSKIVKFIRNEDS 212
           L NQE +LEAKAT VWLD  +RP+RIP+ ++SK V F+R  D+
Sbjct: 145 LPNQEVILEAKATVVWLDNKHRPVRIPSSIRSKFVHFLRQNDT 187


>AT1G35290.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:12947760-12948778 REVERSE LENGTH=189
          Length = 189

 Score =  217 bits (552), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 101/160 (63%), Positives = 125/160 (78%), Gaps = 3/160 (1%)

Query: 53  ILPVNAGNS---LPLFDFSGGKGMSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHE 109
           ILP+ +  +   L  F   GGKGM+G  ++ELKVRDYELD FGVVNNAVYA+YCQHG+HE
Sbjct: 25  ILPLRSTKTFKPLSCFKQQGGKGMNGVHEIELKVRDYELDQFGVVNNAVYANYCQHGQHE 84

Query: 110 LLEGIGINCDAVARSGNALALTELSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYK 169
            +E IGINCD V+RSG ALA++EL++KFL+PLRSG KFVVK RISG+S  R+YF+ FI+K
Sbjct: 85  FMETIGINCDEVSRSGEALAVSELTIKFLAPLRSGCKFVVKTRISGTSMTRIYFEQFIFK 144

Query: 170 LHNQEPVLEAKATAVWLDKNYRPIRIPADMKSKIVKFIRN 209
           L NQEP+LEAK  AVWLDK YRP+ IP+ ++S    F R 
Sbjct: 145 LPNQEPILEAKGMAVWLDKRYRPVCIPSYIRSNFGHFQRQ 184


>AT1G35250.1 | Symbols:  | Thioesterase superfamily protein |
           chr1:12933046-12934465 REVERSE LENGTH=188
          Length = 188

 Score =  205 bits (522), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 93/152 (61%), Positives = 118/152 (77%), Gaps = 3/152 (1%)

Query: 53  ILPVNAGN---SLPLFDFSGGKGMSGFLDVELKVRDYELDHFGVVNNAVYASYCQHGRHE 109
           +LP+ +      L   +  G  G+ GF ++ELKVRDYELD FGVVNNAVYA+YCQHGRHE
Sbjct: 25  VLPLRSAKIFKPLACLELRGSTGIGGFHEIELKVRDYELDQFGVVNNAVYANYCQHGRHE 84

Query: 110 LLEGIGINCDAVARSGNALALTELSLKFLSPLRSGDKFVVKVRISGSSAARLYFDHFIYK 169
            ++ IGINC+ V+RSG ALA+ EL++KFL+PLRSG +FVVK RISG S  R+YF+ FI+K
Sbjct: 85  FMDSIGINCNEVSRSGGALAIPELTIKFLAPLRSGCRFVVKTRISGISLVRIYFEQFIFK 144

Query: 170 LHNQEPVLEAKATAVWLDKNYRPIRIPADMKS 201
           L NQEP+LEAK TAVWLD  YRP R+P+ ++S
Sbjct: 145 LPNQEPILEAKGTAVWLDNKYRPTRVPSHVRS 176