Miyakogusa Predicted Gene

Lj2g3v1022510.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1022510.1 tr|G7KJX5|G7KJX5_MEDTR ABC transporter B family
member OS=Medicago truncatula GN=MTR_6g009030 PE=3
S,82.03,0,ABC_TRANSPORTER_2,ABC transporter-like; ABC_TM1F,ABC
transporter, integral membrane type 1; ABC_TRAN,CUFF.36040.1
         (3558 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV777119 homologue to UniRef100_A7PMJ8 Cluster: Chromos...   412   e-114
gnl|LJGI|FS361887 similar to UniRef100_A7Q0Z8 Cluster: Chromosom...    56   2e-06

>gnl|LJGI|AV777119 homologue to UniRef100_A7PMJ8 Cluster: Chromosome chr14 scaffold_21,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_21, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 447

 Score =  412 bits (208), Expect = e-114
 Identities = 208/208 (100%)
 Strand = Plus / Minus

                                                                        
Query: 3340 gttatggtggggaggactagtgtggtggtggctcacaggttgagcaccattcaaaactgt 3399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447  gttatggtggggaggactagtgtggtggtggctcacaggttgagcaccattcaaaactgt 388

                                                                        
Query: 3400 gatctgattgctgtgttggataaggggagggtggtggagaaagggtcccattcaaacttg 3459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387  gatctgattgctgtgttggataaggggagggtggtggagaaagggtcccattcaaacttg 328

                                                                        
Query: 3460 ttggctaagggaccaagtggagcttattactctttggtgagtctgcagagaagaccaagc 3519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327  ttggctaagggaccaagtggagcttattactctttggtgagtctgcagagaagaccaagc 268

                                        
Query: 3520 aattacactgttgctactgactctacag 3547
            ||||||||||||||||||||||||||||
Sbjct: 267  aattacactgttgctactgactctacag 240


>gnl|LJGI|FS361887 similar to UniRef100_A7Q0Z8 Cluster: Chromosome chr7 scaffold_42,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_42, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (19%)
          Length = 748

 Score = 56.0 bits (28), Expect = 2e-06
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 1333 gatgaagcaacaagcgcactggactccgagtctgaacgagtcgtgcaagaagctct 1388
            |||||||||||||||||||| || || ||||||||| | || |||||||| |||||
Sbjct: 186  gatgaagcaacaagcgcacttgattcggagtctgaaagggtagtgcaagaggctct 131