Miyakogusa Predicted Gene

Lj2g3v1014160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1014160.1 Non Characterized Hit- tr|I1KCJ9|I1KCJ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20159
PE,86.26,0,Prenyltrans,Prenyltransferase/squalene oxidase;
Prenyltrans_2,NULL; seg,NULL; no description,NULL; T,CUFF.35887.1
         (444 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g007165.1 | farnesyltranstransferase subunit beta | HC | c...   790   0.0  
Medtr1g111160.7 | RAB geranylgeranyl transferase beta subunit 2 ...   130   2e-30
Medtr1g111160.4 | RAB geranylgeranyl transferase beta subunit 2 ...   130   2e-30
Medtr1g111160.6 | RAB geranylgeranyl transferase beta subunit 2 ...   130   2e-30
Medtr1g111160.1 | RAB geranylgeranyl transferase beta subunit 2 ...   130   2e-30
Medtr1g111160.3 | RAB geranylgeranyl transferase beta subunit 2 ...   130   2e-30
Medtr1g111160.2 | RAB geranylgeranyl transferase beta subunit 2 ...   129   4e-30
Medtr1g111160.5 | RAB geranylgeranyl transferase beta subunit 2 ...   129   4e-30
Medtr7g024540.1 | geranylgeranyltransferase type I beta subunit ...   122   5e-28

>Medtr6g007165.1 | farnesyltranstransferase subunit beta | HC |
           chr6:1486507-1479409 | 20130731
          Length = 448

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/445 (83%), Positives = 407/445 (91%), Gaps = 5/445 (1%)

Query: 1   MEEXXXXXXXXXXVSQRDQWMVESQVFQIYQLFATIPPNAQSLMVELQRDKHAEYLSKGL 60
           ME           VSQRDQW+VESQVFQIYQLF+TIPPNAQSLM+ELQRDKH EYLSKGL
Sbjct: 1   MEPSSVVETPSPTVSQRDQWIVESQVFQIYQLFSTIPPNAQSLMLELQRDKHIEYLSKGL 60

Query: 61  RHLGPAFSVLDANRPWLCYWILHSIALLGESIDDELEDHTIDFLNRCQDPNGGYAGGPGQ 120
           RHLG AFSVLDANRPWLCYWI+H+IALLGE+IDD+LED+T+DFLNRCQDPNGG+AGGPGQ
Sbjct: 61  RHLGSAFSVLDANRPWLCYWIIHAIALLGETIDDDLEDNTVDFLNRCQDPNGGFAGGPGQ 120

Query: 121 MPHLATTYAAVNTLITLGGQKSLASINRDKLYGFLQRMKQPNGGFRMHNEGEIDVRACYT 180
           MPHLATTYA+VNTLITLGG K+LASINRDKLYGF++RMKQPNGGFRMH+EGEIDVRACYT
Sbjct: 121 MPHLATTYASVNTLITLGGDKALASINRDKLYGFMRRMKQPNGGFRMHDEGEIDVRACYT 180

Query: 181 AISVASILNILDDELIQNVGDYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIGEVN 240
           AISVAS+LNILDDELI+NVGD+ILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIGE N
Sbjct: 181 AISVASVLNILDDELIKNVGDFILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIGEAN 240

Query: 241 RLDLPRLVEWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLHTIVNKQMVEASQ 300
           RLDLPRL++WVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRL +++ +QMVEASQ
Sbjct: 241 RLDLPRLLDWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLQSVIEEQMVEASQ 300

Query: 301 FCTISGESEEKESLDGTSSHATSHIGHDG-----SYDFKNIGYDFINEWRASDPLFHSIA 355
             T S   +EKES  GTSSHATS I  +G     S D KNIG +FINEWR S+PLFHSIA
Sbjct: 301 SFTKSDAPDEKESSAGTSSHATSRIRREGISESCSSDVKNIGLNFINEWRESEPLFHSIA 360

Query: 356 LQQYILLCSQDQDGGLRDKPGKRRDHYHTCYCLSGLSVCQYSWSKHPDSPPLPKVVLGPY 415
           LQQYILLC+Q+Q+GGLRDKPGKRRDHYH+CYCLSGLS+CQYSWSK PDSPPLPKVV+GPY
Sbjct: 361 LQQYILLCAQEQEGGLRDKPGKRRDHYHSCYCLSGLSLCQYSWSKRPDSPPLPKVVMGPY 420

Query: 416 SNLLEPIHPLFNVVLERYREAHEFF 440
           SNLLEPIHPLFNVVLERYREAHEFF
Sbjct: 421 SNLLEPIHPLFNVVLERYREAHEFF 445


>Medtr1g111160.7 | RAB geranylgeranyl transferase beta subunit 2 |
           HC | chr1:50207475-50203040 | 20130731
          Length = 336

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 7/256 (2%)

Query: 44  MVELQRDKHAEY-LSKGLRHLGPAFSVLDANRPWLCYWILHSIALLGESIDDELEDH-TI 101
           M +L  +KH +Y LS   +       V++  R    YW L ++ LLG+   D ++ H  +
Sbjct: 1   MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKL--DTVDVHEVV 58

Query: 102 DFLNRCQDPNGGYAGGPGQMPHLATTYAAVNTLITLGGQKSLASINRDKLYGFLQRMKQP 161
            ++  CQ   GG+ G  G  PH+  T +AV  L        L  I+ DK+  ++  ++  
Sbjct: 59  SWIMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALF---NKLDVIDADKVTNYIVGLQNE 115

Query: 162 NGGFRMHNEGEIDVRACYTAISVASILNILDDELIQNVGDYILSCQTYEGGIAGEPGSEA 221
           +G F     GE+D R  Y AI   S+L+ LD   +     YI+SCQ  +GG    PG E+
Sbjct: 116 DGSFSGDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGES 175

Query: 222 HGGYTFCGLAAMILIGEVNRLDLPRLVEWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAV 281
           H G  FC + A+ + G ++ +D   L  W+  RQ K  G  GR  KL D CYS+W   ++
Sbjct: 176 HAGQIFCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSL 235

Query: 282 ALLQRLHTIVNKQMVE 297
            ++ R+H I  +++++
Sbjct: 236 IMIDRVHWISKEKLIK 251


>Medtr1g111160.4 | RAB geranylgeranyl transferase beta subunit 2 |
           HC | chr1:50207475-50203019 | 20130731
          Length = 259

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 7/263 (2%)

Query: 44  MVELQRDKHAEY-LSKGLRHLGPAFSVLDANRPWLCYWILHSIALLGESIDDELEDH-TI 101
           M +L  +KH +Y LS   +       V++  R    YW L ++ LLG+   D ++ H  +
Sbjct: 1   MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKL--DTVDVHEVV 58

Query: 102 DFLNRCQDPNGGYAGGPGQMPHLATTYAAVNTLITLGGQKSLASINRDKLYGFLQRMKQP 161
            ++  CQ   GG+ G  G  PH+  T +AV  L        L  I+ DK+  ++  ++  
Sbjct: 59  SWIMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALF---NKLDVIDADKVTNYIVGLQNE 115

Query: 162 NGGFRMHNEGEIDVRACYTAISVASILNILDDELIQNVGDYILSCQTYEGGIAGEPGSEA 221
           +G F     GE+D R  Y AI   S+L+ LD   +     YI+SCQ  +GG    PG E+
Sbjct: 116 DGSFSGDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGES 175

Query: 222 HGGYTFCGLAAMILIGEVNRLDLPRLVEWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAV 281
           H G  FC + A+ + G ++ +D   L  W+  RQ K  G  GR  KL D CYS+W   ++
Sbjct: 176 HAGQIFCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSL 235

Query: 282 ALLQRLHTIVNKQMVEASQFCTI 304
            ++ R+H I  +++++    C +
Sbjct: 236 IMIDRVHWISKEKLIKFILDCQV 258


>Medtr1g111160.6 | RAB geranylgeranyl transferase beta subunit 2 |
           HC | chr1:50207475-50203019 | 20130731
          Length = 259

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 7/263 (2%)

Query: 44  MVELQRDKHAEY-LSKGLRHLGPAFSVLDANRPWLCYWILHSIALLGESIDDELEDH-TI 101
           M +L  +KH +Y LS   +       V++  R    YW L ++ LLG+   D ++ H  +
Sbjct: 1   MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKL--DTVDVHEVV 58

Query: 102 DFLNRCQDPNGGYAGGPGQMPHLATTYAAVNTLITLGGQKSLASINRDKLYGFLQRMKQP 161
            ++  CQ   GG+ G  G  PH+  T +AV  L        L  I+ DK+  ++  ++  
Sbjct: 59  SWIMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALF---NKLDVIDADKVTNYIVGLQNE 115

Query: 162 NGGFRMHNEGEIDVRACYTAISVASILNILDDELIQNVGDYILSCQTYEGGIAGEPGSEA 221
           +G F     GE+D R  Y AI   S+L+ LD   +     YI+SCQ  +GG    PG E+
Sbjct: 116 DGSFSGDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGES 175

Query: 222 HGGYTFCGLAAMILIGEVNRLDLPRLVEWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAV 281
           H G  FC + A+ + G ++ +D   L  W+  RQ K  G  GR  KL D CYS+W   ++
Sbjct: 176 HAGQIFCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSL 235

Query: 282 ALLQRLHTIVNKQMVEASQFCTI 304
            ++ R+H I  +++++    C +
Sbjct: 236 IMIDRVHWISKEKLIKFILDCQV 258


>Medtr1g111160.1 | RAB geranylgeranyl transferase beta subunit 2 |
           HC | chr1:50207475-50203019 | 20130731
          Length = 313

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 7/256 (2%)

Query: 44  MVELQRDKHAEY-LSKGLRHLGPAFSVLDANRPWLCYWILHSIALLGESIDDELEDH-TI 101
           M +L  +KH +Y LS   +       V++  R    YW L ++ LLG+   D ++ H  +
Sbjct: 1   MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKL--DTVDVHEVV 58

Query: 102 DFLNRCQDPNGGYAGGPGQMPHLATTYAAVNTLITLGGQKSLASINRDKLYGFLQRMKQP 161
            ++  CQ   GG+ G  G  PH+  T +AV  L        L  I+ DK+  ++  ++  
Sbjct: 59  SWIMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALF---NKLDVIDADKVTNYIVGLQNE 115

Query: 162 NGGFRMHNEGEIDVRACYTAISVASILNILDDELIQNVGDYILSCQTYEGGIAGEPGSEA 221
           +G F     GE+D R  Y AI   S+L+ LD   +     YI+SCQ  +GG    PG E+
Sbjct: 116 DGSFSGDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGES 175

Query: 222 HGGYTFCGLAAMILIGEVNRLDLPRLVEWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAV 281
           H G  FC + A+ + G ++ +D   L  W+  RQ K  G  GR  KL D CYS+W   ++
Sbjct: 176 HAGQIFCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSL 235

Query: 282 ALLQRLHTIVNKQMVE 297
            ++ R+H I  +++++
Sbjct: 236 IMIDRVHWISKEKLIK 251


>Medtr1g111160.3 | RAB geranylgeranyl transferase beta subunit 2 |
           HC | chr1:50207486-50203019 | 20130731
          Length = 313

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 7/256 (2%)

Query: 44  MVELQRDKHAEY-LSKGLRHLGPAFSVLDANRPWLCYWILHSIALLGESIDDELEDH-TI 101
           M +L  +KH +Y LS   +       V++  R    YW L ++ LLG+   D ++ H  +
Sbjct: 1   MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKL--DTVDVHEVV 58

Query: 102 DFLNRCQDPNGGYAGGPGQMPHLATTYAAVNTLITLGGQKSLASINRDKLYGFLQRMKQP 161
            ++  CQ   GG+ G  G  PH+  T +AV  L        L  I+ DK+  ++  ++  
Sbjct: 59  SWIMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALF---NKLDVIDADKVTNYIVGLQNE 115

Query: 162 NGGFRMHNEGEIDVRACYTAISVASILNILDDELIQNVGDYILSCQTYEGGIAGEPGSEA 221
           +G F     GE+D R  Y AI   S+L+ LD   +     YI+SCQ  +GG    PG E+
Sbjct: 116 DGSFSGDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGES 175

Query: 222 HGGYTFCGLAAMILIGEVNRLDLPRLVEWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAV 281
           H G  FC + A+ + G ++ +D   L  W+  RQ K  G  GR  KL D CYS+W   ++
Sbjct: 176 HAGQIFCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSL 235

Query: 282 ALLQRLHTIVNKQMVE 297
            ++ R+H I  +++++
Sbjct: 236 IMIDRVHWISKEKLIK 251


>Medtr1g111160.2 | RAB geranylgeranyl transferase beta subunit 2 |
           HC | chr1:50207475-50203019 | 20130731
          Length = 253

 Score =  129 bits (325), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 128/253 (50%), Gaps = 7/253 (2%)

Query: 44  MVELQRDKHAEY-LSKGLRHLGPAFSVLDANRPWLCYWILHSIALLGESIDDELEDH-TI 101
           M +L  +KH +Y LS   +       V++  R    YW L ++ LLG+   D ++ H  +
Sbjct: 1   MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKL--DTVDVHEVV 58

Query: 102 DFLNRCQDPNGGYAGGPGQMPHLATTYAAVNTLITLGGQKSLASINRDKLYGFLQRMKQP 161
            ++  CQ   GG+ G  G  PH+  T +AV  L        L  I+ DK+  ++  ++  
Sbjct: 59  SWIMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALF---NKLDVIDADKVTNYIVGLQNE 115

Query: 162 NGGFRMHNEGEIDVRACYTAISVASILNILDDELIQNVGDYILSCQTYEGGIAGEPGSEA 221
           +G F     GE+D R  Y AI   S+L+ LD   +     YI+SCQ  +GG    PG E+
Sbjct: 116 DGSFSGDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGES 175

Query: 222 HGGYTFCGLAAMILIGEVNRLDLPRLVEWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAV 281
           H G  FC + A+ + G ++ +D   L  W+  RQ K  G  GR  KL D CYS+W   ++
Sbjct: 176 HAGQIFCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSL 235

Query: 282 ALLQRLHTIVNKQ 294
            ++ R+H I ++Q
Sbjct: 236 IMIDRVHWIRHRQ 248


>Medtr1g111160.5 | RAB geranylgeranyl transferase beta subunit 2 |
           HC | chr1:50207475-50203019 | 20130731
          Length = 253

 Score =  129 bits (325), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 128/253 (50%), Gaps = 7/253 (2%)

Query: 44  MVELQRDKHAEY-LSKGLRHLGPAFSVLDANRPWLCYWILHSIALLGESIDDELEDH-TI 101
           M +L  +KH +Y LS   +       V++  R    YW L ++ LLG+   D ++ H  +
Sbjct: 1   MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKL--DTVDVHEVV 58

Query: 102 DFLNRCQDPNGGYAGGPGQMPHLATTYAAVNTLITLGGQKSLASINRDKLYGFLQRMKQP 161
            ++  CQ   GG+ G  G  PH+  T +AV  L        L  I+ DK+  ++  ++  
Sbjct: 59  SWIMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALF---NKLDVIDADKVTNYIVGLQNE 115

Query: 162 NGGFRMHNEGEIDVRACYTAISVASILNILDDELIQNVGDYILSCQTYEGGIAGEPGSEA 221
           +G F     GE+D R  Y AI   S+L+ LD   +     YI+SCQ  +GG    PG E+
Sbjct: 116 DGSFSGDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGES 175

Query: 222 HGGYTFCGLAAMILIGEVNRLDLPRLVEWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAV 281
           H G  FC + A+ + G ++ +D   L  W+  RQ K  G  GR  KL D CYS+W   ++
Sbjct: 176 HAGQIFCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSL 235

Query: 282 ALLQRLHTIVNKQ 294
            ++ R+H I ++Q
Sbjct: 236 IMIDRVHWIRHRQ 248


>Medtr7g024540.1 | geranylgeranyltransferase type I beta subunit |
           HC | chr7:8090726-8084951 | 20130731
          Length = 355

 Score =  122 bits (307), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 14/185 (7%)

Query: 123 HLATTYAAVNTLITLGGQKSLASINRDKLYGFLQRMKQPNGGFR-MHNEGEIDVRACYTA 181
           HLA+TY A+  L  +G   S            ++ ++QP+G F  +H  GE D+R  Y A
Sbjct: 114 HLASTYCALAILKIVGYDLSSLDSESMSSS--MKNLQQPDGSFMPIHIGGETDLRFVYCA 171

Query: 182 ISVASILNILDDELIQNVGDYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIGEV-- 239
            ++  +L+  +    + V DYIL+CQ+Y+GG    PG+E+HGG T+C +A++ L+G V  
Sbjct: 172 AAICFMLDNWNGMDKEKVKDYILNCQSYDGGFGLVPGAESHGGATYCAIASLRLMGYVED 231

Query: 240 ---------NRLDLPRLVEWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLHTI 290
                    + +DLP L++W++ RQG + GFQGR NK  D CY+FW GG + +L   + +
Sbjct: 232 NVLSSCNLSSLIDLPLLLDWILQRQGTDGGFQGRPNKSTDTCYAFWIGGVLRILGGCNFV 291

Query: 291 VNKQM 295
            NK +
Sbjct: 292 DNKAL 296