Miyakogusa Predicted Gene

Lj2g3v0921560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0921560.1 Non Chatacterized Hit- tr|I1N5K6|I1N5K6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30663 PE,89.09,0,no
description,Armadillo-like helical; seg,NULL; coiled-coil,NULL; ARM
repeat,Armadillo-type fold; G,CUFF.35783.1
         (914 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27530.1 | Symbols: GC6, MAG4 | golgin candidate 6 | chr3:101...  1192   0.0  

>AT3G27530.1 | Symbols: GC6, MAG4 | golgin candidate 6 |
           chr3:10193778-10199659 REVERSE LENGTH=914
          Length = 914

 Score = 1192 bits (3083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/899 (66%), Positives = 723/899 (80%), Gaps = 6/899 (0%)

Query: 3   MDLMSGYKGVVGLVFGNENSSNEDSYVERLLDRISNGKLPEDRRNAIIELQAVVAESQPF 62
           MDL S YKGVVG+VFG+  SSNEDSY++RLLDRISNG LP+DRR AI+ELQ+VVAES   
Sbjct: 1   MDLASRYKGVVGMVFGDNQSSNEDSYIQRLLDRISNGTLPDDRRTAIVELQSVVAESNAA 60

Query: 63  QLAFGAMGFPIMLSVLKEERDDVEMVRGALETLVSALTPINRAKGSSNEVQPDLMNTDLL 122
           QLAFGA GFP+++ +LK++RDD+EMVRGALETL+ ALTPI+ A+    EVQ  LMN+DLL
Sbjct: 61  QLAFGAAGFPVIVGILKDQRDDLEMVRGALETLLGALTPIDHARAQKTEVQAALMNSDLL 120

Query: 123 SREAGSIXXXXXXXXXXXFYVRYYTLQILTALLTNSPQRLQEAILTIPRGITRLMDMLMD 182
           SREA +I           FYVRYYTLQILTALL NS  RLQEAILT PRGITRLMDMLMD
Sbjct: 121 SREAENITLLLSLLEEEDFYVRYYTLQILTALLMNSQNRLQEAILTTPRGITRLMDMLMD 180

Query: 183 REVIRNEALLLLTHLTREAEEIQKIVVFEGAFEKIFSIIREEGNSDGGVVVQDCLELLNN 242
           REVIRNEALLLLTHLTREAEEIQKIVVFEGAFEKIFSII+EEG SDG VVVQDCLELLNN
Sbjct: 181 REVIRNEALLLLTHLTREAEEIQKIVVFEGAFEKIFSIIKEEGGSDGDVVVQDCLELLNN 240

Query: 243 LLRNTASNQVLLRETIGLDSLISILKLRGNSYTFTQQKTINXXXXXXXXXXXXXGGSEAD 302
           LLR+++SNQ+LLRET+G + +ISILKLRG +Y FTQQKT+N             G ++ +
Sbjct: 241 LLRSSSSNQILLRETMGFEPIISILKLRGITYKFTQQKTVNLLSALETINMLIMGRADTE 300

Query: 303 PGKDMNKQTNKTALVQKKVLDHLLVLGVESQWVPVAVRCAATRCIGDLIAGDSKNLDLLA 362
           PGKD NK  N+T LVQKK+LD+LL+LGVESQW PVAVRC   +CIGDLI G  KN D+LA
Sbjct: 301 PGKDSNKLANRTVLVQKKLLDYLLMLGVESQWAPVAVRCMTFKCIGDLIDGHPKNRDILA 360

Query: 363 SKVFGEAPQDEPALNSILRILLRTSSMQEFIAADYVFKSFCEKNADGQSMLASTLIPQPY 422
           SKV GE  Q EPALNSILRI+L+TSS+QEF+AADYVFK+FCEKN +GQ+MLASTLIPQP+
Sbjct: 361 SKVLGEDRQVEPALNSILRIILQTSSIQEFVAADYVFKTFCEKNTEGQTMLASTLIPQPH 420

Query: 423 SMNHAFLEGDVNMSFGSMLLHGLTFGENDGDLETCCRAASVLSHILKDNLQCKERVLRIE 482
             +   LE DV+MSFGSMLL GL  GE DGDLETCCRAAS+LSH++KDNL+CKE+ L+I 
Sbjct: 421 PTSRDHLEDDVHMSFGSMLLRGLCSGEADGDLETCCRAASILSHVVKDNLRCKEKALKIV 480

Query: 483 IEAPTQSLGAPEPLMHRMVKCLALASSMKSKDGKSSTSGNSYIQAIILKLLITWLADFPS 542
           +E+P  S+G PEPL  R+V+ LA+ASSMKSK  KSST G SYIQ IILKLL+TW  D P+
Sbjct: 481 LESPMPSMGTPEPLFQRIVRYLAVASSMKSK-EKSSTLGKSYIQQIILKLLVTWTVDCPT 539

Query: 543 AVHCFLDARPHLTYLLELVSNLSETVCIRGFAAVVLGECVIYNKSTESGKDASAIVDTIS 602
           AV CFLD+R HLT+LLELV++ + TVCIRG A+++LGECVIYNKS E+GKDA ++VD + 
Sbjct: 540 AVQCFLDSRHHLTFLLELVTDPAATVCIRGLASILLGECVIYNKSIENGKDAFSVVDAVG 599

Query: 603 QKVGLSSYFLKFDEMQKSFVFA-NVESSLVHKSFTRSSAASMADIEDVDENDMSEKKNMD 661
           QK+GL+SYF KF+EMQ SF+F+ + +    +K  TR+   S A+I +VDE D   K N D
Sbjct: 600 QKMGLTSYFSKFEEMQNSFIFSPSKKPPQGYKPLTRTPTPSEAEINEVDEVDEMVKGNED 659

Query: 662 HPVLSSILDSYFVNLVKRLEADIREQIVEVYSHPKTKVAVVPAELEQKSGESDGEYVKRL 721
           HP+L S+ D+ F+ LVK LE +IRE+IV+VYS PK++VAVVPA+LEQKSGE++ +Y+ RL
Sbjct: 660 HPMLLSLFDASFIGLVKSLEGNIRERIVDVYSRPKSEVAVVPADLEQKSGENEKDYINRL 719

Query: 722 KAFVEKQCSEIKGLVIRNATLAEDLAKTGSSFQ---SEQRGSGGSDRVQIETLRRDFHEA 778
           KAF+EKQCSEI+ L+ RNA LAED+A +G + Q   SEQR S   D+VQ+E++RR+  E 
Sbjct: 720 KAFIEKQCSEIQNLLARNAALAEDVASSGRNEQSQGSEQRASTVMDKVQMESIRRELQET 779

Query: 779 CQRLEALKAEKAKVESEAIMYRNLAEKTEADLRSLSDAYNSLEHSNLQLENEVKALK-RE 837
            QRLE +KAEKAK+ESEA   +N+A K E DL+SLSDAYNSLE +N  LE EVK+LK  E
Sbjct: 780 SQRLETVKAEKAKIESEASSNKNMAAKLEFDLKSLSDAYNSLEQANYHLEQEVKSLKGGE 839

Query: 838 GHSAFPDVEAIKAEAREEAQKESEGELNDLLVCLGQEQSKVDRLSARLLELGEDVDKLL 896
               FPD+EAIK E R+EAQKESE ELNDLLVCLGQE+SKV++LSA+L+ELG DVDKLL
Sbjct: 840 SPMQFPDIEAIKEEVRKEAQKESEDELNDLLVCLGQEESKVEKLSAKLIELGVDVDKLL 898