Miyakogusa Predicted Gene

Lj2g3v0917320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0917320.1 Non Characterized Hit- tr|I1K1P3|I1K1P3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15561
PE,82.11,0,METHIONYL-TRNA FORMYLTRANSFERASE,Methionine tRNA
Formyltransferase-like; Formyltransferase,Formyl tr,CUFF.35742.1
         (342 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g003980.1 | methionyl-tRNA formyltransferase | HC | chr6:4...   561   e-160
Medtr6g003980.2 | methionyl-tRNA formyltransferase | HC | chr6:4...   553   e-158
Medtr5g012850.1 | formyltetrahydrofolate deformylase | HC | chr5...    55   8e-08
Medtr5g012850.3 | formyltetrahydrofolate deformylase | HC | chr5...    53   4e-07

>Medtr6g003980.1 | methionyl-tRNA formyltransferase | HC |
           chr6:44441-50370 | 20130731
          Length = 354

 Score =  561 bits (1445), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/342 (80%), Positives = 298/342 (87%), Gaps = 5/342 (1%)

Query: 1   MIRRLCCVQXXXXXXXXXXXXXXXXXXXXXXLVLLGAPQVSAIVLDALLTASTSPHSSFE 60
           MIRRLCCVQ                      +VLLGAPQVS IVLDALLTAS SPHSSFE
Sbjct: 1   MIRRLCCVQSQSSTFTFTTTTNKKKP-----VVLLGAPQVSTIVLDALLTASASPHSSFE 55

Query: 61  VAAIVTQPNARRDRGKKLMPSPLASYALERGFSSHLIFTPERAGDDAFLSNLKALQPELC 120
           VAAIVTQP ARRDRGKKL  SPLA++ALERGFSSHLIFTP+RAGDD FLS+LKALQP+LC
Sbjct: 56  VAAIVTQPPARRDRGKKLSLSPLANFALERGFSSHLIFTPQRAGDDTFLSDLKALQPQLC 115

Query: 121 ITAAYGNILPTKFLDIPPLGTVNIHPSLLPMYRGAAPVQRALQDGVKETGVSLAYTVRAL 180
           ITAAYGNILPTKFLDIPP GTVNIHPSLLP+YRGAAPVQRALQDGVKETGVSLA+TVRAL
Sbjct: 116 ITAAYGNILPTKFLDIPPSGTVNIHPSLLPIYRGAAPVQRALQDGVKETGVSLAFTVRAL 175

Query: 181 DAGPLIASERVEVDDQIKAPDLLDLLFHKGSNLLIRELPSIFDGSARVKAQPQDDSKVTL 240
           DAGP+IA+E ++VDD IKAPDLL+LLFHKGS LLIRELPSIFDGSAR  AQPQDDSK TL
Sbjct: 176 DAGPVIATETIQVDDHIKAPDLLELLFHKGSKLLIRELPSIFDGSARANAQPQDDSKATL 235

Query: 241 APKISPDETWLGFDQEACVLHNKVRAFSGWPGTRAKVLVVDKNGQQKTLEFKIITTRVCS 300
           APKI PDE+WL FDQEA VLHNKVRAFSGWPG+R K+LV DKNGQ KTLE KIITTRVC+
Sbjct: 236 APKIGPDESWLSFDQEASVLHNKVRAFSGWPGSRVKILVADKNGQNKTLEIKIITTRVCT 295

Query: 301 HENVQFNEADDIAFVNGALVFPCGRGTALEVLEVQLPGKKVV 342
           H++VQFNEADDI+FVNGALVFPCGRGT LEVLE+QLPGKK V
Sbjct: 296 HKSVQFNEADDISFVNGALVFPCGRGTTLEVLELQLPGKKAV 337


>Medtr6g003980.2 | methionyl-tRNA formyltransferase | HC |
           chr6:44441-50370 | 20130731
          Length = 352

 Score =  553 bits (1426), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 275/342 (80%), Positives = 297/342 (86%), Gaps = 7/342 (2%)

Query: 1   MIRRLCCVQXXXXXXXXXXXXXXXXXXXXXXLVLLGAPQVSAIVLDALLTASTSPHSSFE 60
           MIRRLCCVQ                      +VLLGAPQVS IVLDALLTAS SPHSSFE
Sbjct: 1   MIRRLCCVQSQSSTFTFTTTTNKKKP-----VVLLGAPQVSTIVLDALLTASASPHSSFE 55

Query: 61  VAAIVTQPNARRDRGKKLMPSPLASYALERGFSSHLIFTPERAGDDAFLSNLKALQPELC 120
           VAAIVTQP ARRDRGKKL  SPLA++ALERGFSSHLIFTP+RAGDD FLS+LKALQP+LC
Sbjct: 56  VAAIVTQPPARRDRGKKLSLSPLANFALERGFSSHLIFTPQRAGDDTFLSDLKALQPQLC 115

Query: 121 ITAAYGNILPTKFLDIPPLGTVNIHPSLLPMYRGAAPVQRALQDGVKETGVSLAYTVRAL 180
           ITAAYGNILPTKFLDIPP  +VNIHPSLLP+YRGAAPVQRALQDGVKETGVSLA+TVRAL
Sbjct: 116 ITAAYGNILPTKFLDIPP--SVNIHPSLLPIYRGAAPVQRALQDGVKETGVSLAFTVRAL 173

Query: 181 DAGPLIASERVEVDDQIKAPDLLDLLFHKGSNLLIRELPSIFDGSARVKAQPQDDSKVTL 240
           DAGP+IA+E ++VDD IKAPDLL+LLFHKGS LLIRELPSIFDGSAR  AQPQDDSK TL
Sbjct: 174 DAGPVIATETIQVDDHIKAPDLLELLFHKGSKLLIRELPSIFDGSARANAQPQDDSKATL 233

Query: 241 APKISPDETWLGFDQEACVLHNKVRAFSGWPGTRAKVLVVDKNGQQKTLEFKIITTRVCS 300
           APKI PDE+WL FDQEA VLHNKVRAFSGWPG+R K+LV DKNGQ KTLE KIITTRVC+
Sbjct: 234 APKIGPDESWLSFDQEASVLHNKVRAFSGWPGSRVKILVADKNGQNKTLEIKIITTRVCT 293

Query: 301 HENVQFNEADDIAFVNGALVFPCGRGTALEVLEVQLPGKKVV 342
           H++VQFNEADDI+FVNGALVFPCGRGT LEVLE+QLPGKK V
Sbjct: 294 HKSVQFNEADDISFVNGALVFPCGRGTTLEVLELQLPGKKAV 335


>Medtr5g012850.1 | formyltetrahydrofolate deformylase | HC |
           chr5:3945784-3948354 | 20130731
          Length = 349

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 112 LKALQ-PELCITAAYGNILPTKFLDIPPLGTVNIHPSLLPMYRGAAPVQRALQDGVKETG 170
           LK +Q  +  + A Y  I+ + FL       +NIH  LLP +RGA P ++A   GVK  G
Sbjct: 223 LKLVQDTDFLVLARYTKIISSTFLRSYGKDIINIHHCLLPSFRGANPFKQAFDAGVKIIG 282

Query: 171 VSLAYTVRALDAGPLIAS--ERVEVDDQIK 198
            +  +     DAGP+I    ERV   D ++
Sbjct: 283 ATSHFVTEGRDAGPIIEQMVERVSHKDDLQ 312


>Medtr5g012850.3 | formyltetrahydrofolate deformylase | HC |
           chr5:3945784-3948354 | 20130731
          Length = 312

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 112 LKALQ-PELCITAAYGNILPTKFLDIPPLGTVNIHPSLLPMYRGAAPVQRALQDGVKETG 170
           LK +Q  +  + A Y  I+ + FL       +NIH  LLP +RGA P ++A   GVK  G
Sbjct: 223 LKLVQDTDFLVLARYTKIISSTFLRSYGKDIINIHHCLLPSFRGANPFKQAFDAGVKIIG 282

Query: 171 VSLAYTVRALDAGPLI 186
            +  +     DAGP+I
Sbjct: 283 ATSHFVTEGRDAGPII 298