Miyakogusa Predicted Gene
- Lj2g3v0915090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0915090.1 CUFF.35723.1
(2280 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB828719 similar to UniRef100_A7QNQ6 Cluster: Chromosom... 404 e-112
gnl|LJGI|TC70849 similar to UniRef100_A7QNQ6 Cluster: Chromosome... 365 e-100
gnl|LJGI|FS326932 96 1e-18
gnl|LJGI|TC81455 similar to UniRef100_A7R3U5 Cluster: Chromosome... 84 4e-15
>gnl|LJGI|CB828719 similar to UniRef100_A7QNQ6 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(7%)
Length = 540
Score = 404 bits (204), Expect = e-112
Identities = 204/204 (100%)
Strand = Plus / Plus
Query: 1915 gtgattgctgatgttgttagcattatagcggagaaaattgatattgtaacacttgaaata 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gtgattgctgatgttgttagcattatagcggagaaaattgatattgtaacacttgaaata 396
Query: 1975 tgcgctggtcttctgccactactaactgaccttttacgaagtgaaatggatagacatcta 2034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgcgctggtcttctgccactactaactgaccttttacgaagtgaaatggatagacatcta 456
Query: 2035 ggagtatccttggaaatgctattgaagctggtcagattatatggttctgtaatatattca 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ggagtatccttggaaatgctattgaagctggtcagattatatggttctgtaatatattca 516
Query: 2095 accatatcagcgaaaccctccgtt 2118
||||||||||||||||||||||||
Sbjct: 517 accatatcagcgaaaccctccgtt 540
Score = 163 bits (82), Expect = 6e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1837 caggtggtcttaaggtgttgggaaagaaatgatgttaaggaagtcattggtactatggcg 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 caggtggtcttaaggtgttgggaaagaaatgatgttaaggaagtcattggtactatggcg 166
Query: 1897 aagatggaagatcatgctgtga 1918
||||||||||||||||||||||
Sbjct: 167 aagatggaagatcatgctgtga 188
>gnl|LJGI|TC70849 similar to UniRef100_A7QNQ6 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(6%)
Length = 681
Score = 365 bits (184), Expect = e-100
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 2097 catatcagcgaaaccctccgttggtgttgatatcgaggcagagataaggctagatcgttg 2156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catatcagcgaaaccctccgttggtgttgatatcgaggcagagataaggctagatcgttg 60
Query: 2157 caacctctgctttatagagcttgataaggttaaacgttttataccttctctttcaagaag 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caacctctgctttatagagcttgataaggttaaacgttttataccttctctttcaagaag 120
Query: 2217 aggaggatcaattgcaaaatatgcacaggagttgaatctggctctccaggatgtttcatg 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggaggatcaattgcaaaatatgcacaggagttgaatctggctctccaggatgtttcatg 180
Query: 2277 attc 2280
||||
Sbjct: 181 attc 184
>gnl|LJGI|FS326932
Length = 531
Score = 95.6 bits (48), Expect = 1e-18
Identities = 67/74 (90%), Gaps = 7/74 (9%)
Strand = Plus / Plus
Query: 1 atgactaccaaacgcgcgtacaagctac-------aggaatttgtagcgcatgcttctac 53
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 458 atgactaccaaacgcgcgtacaagctactgtttagaggaatttgtagcgcatgcttctac 517
Query: 54 tgttaattgtctca 67
||||||||||||||
Sbjct: 518 tgttaattgtctca 531
>gnl|LJGI|TC81455 similar to UniRef100_A7R3U5 Cluster: Chromosome undetermined
scaffold_569, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_569,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (35%)
Length = 786
Score = 83.8 bits (42), Expect = 4e-15
Identities = 144/178 (80%)
Strand = Plus / Plus
Query: 250 aagctttgggacttagaagaggcaaagattgttcgtactcttactggtcatcggtccaac 309
||||||||||| || ||||| | |||||| ||||| ||| || |||| || |||||||
Sbjct: 472 aagctttgggatttggaagaaggaaagatggttcgcactgttgctggacacaggtccaat 531
Query: 310 tgcacatcggtggactttcatccttttggagagttctttgcatctggttctctagacact 369
|||| | || || |||||||| ||||| ||||| || |||||||| || | ||||||
Sbjct: 532 tgcaatgctgttgaatttcatccgtttggtgagtttttcgcatctggctccatggacact 591
Query: 370 aatcttaagatatgggacatcagaaagaaggggtgtattcatacatacaagggccaca 427
||||| ||||| |||||||| |||| || || |||||||||||||||||||| ||||
Sbjct: 592 aatctaaagatttgggacattcgaaaaaaaggatgtattcatacatacaagggtcaca 649